AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1439610

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1439610 MtrunA17_Chr7g0220231 98.323 775 12 1 1 775 1 774 0.0 1564
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1439610 AT5G38880.1 70.025 794 210 6 4 774 6 794 0.0 1115

Find 230 sgRNAs with CRISPR-Local

Find 623 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCTACAGTATCCACTTTA+TGG 0.131855 tig0028823:+36243 Msa1439610:CDS
AGAGGTTTCTTTCTTGTTCT+TGG 0.168300 tig0028823:-41276 None:intergenic
TCTAATTAGTGACTCGTTAT+TGG 0.179445 tig0028823:+33156 Msa1439610:five_prime_UTR
GTTAGTTATGTTATGTTTAA+TGG 0.182783 tig0028823:-33083 None:intergenic
ATCTCGGCTTAGTCGCTTCT+TGG 0.189413 tig0028823:+33113 Msa1439610:five_prime_UTR
TATAGTAACAGAGACGTTTA+TGG 0.205757 tig0028823:-35383 None:intergenic
TGCAGGATGCTGCTTCATTT+TGG 0.252455 tig0028823:+38592 Msa1439610:intron
GAGGTTTCTTTCTTGTTCTT+GGG 0.257118 tig0028823:-41275 None:intergenic
CAGTAATTGCCTGAAGTAAT+AGG 0.266699 tig0028823:-35755 None:intergenic
AAGAGAAGTTGCTGGTTTAA+AGG 0.281025 tig0028823:+37845 Msa1439610:CDS
GAAGAGAGAAGGGGAGGAAG+TGG 0.281721 tig0028823:+33526 Msa1439610:CDS
TAAGAAGGGGTTATTCTCTT+TGG 0.297881 tig0028823:-33009 None:intergenic
TTGATGAACGGGCGAATTAC+AGG 0.306303 tig0028823:+33684 Msa1439610:CDS
GCACAAGATCCCGTCTAATA+TGG 0.306533 tig0028823:-40324 None:intergenic
TGGAAGCTTGCAAATATGTT+TGG 0.312539 tig0028823:+40687 Msa1439610:CDS
AGCTGTTTATTCTACTGTTA+AGG 0.323612 tig0028823:+35491 Msa1439610:CDS
CATGTATTCAGCTAGATGTT+TGG 0.326608 tig0028823:+37814 Msa1439610:intron
GGAAGCTTGCAAATATGTTT+GGG 0.327032 tig0028823:+40688 Msa1439610:CDS
GGAAGTGGAGGTTGCGTTGA+TGG 0.329516 tig0028823:+33541 Msa1439610:CDS
ATGTATTCAGCTAGATGTTT+GGG 0.331353 tig0028823:+37815 Msa1439610:intron
CTCCGGCGCTGGCGGCGTAT+TGG 0.336927 tig0028823:-33334 None:intergenic
GTACTTCAAGCATTTACTTT+GGG 0.340628 tig0028823:+41209 Msa1439610:CDS
CCTCGTAACACGTGCGAAAT+CGG 0.342227 tig0028823:+33430 Msa1439610:CDS
CACGGTGAAGGGGATGGTGG+TGG 0.347298 tig0028823:+33491 Msa1439610:CDS
CTTTATGGAAATGGAAAACT+TGG 0.352170 tig0028823:+36258 Msa1439610:CDS
CAGTATCCACTTTATGGAAA+TGG 0.356840 tig0028823:+36249 Msa1439610:CDS
GATGTTACTTCTCGTTCAAT+TGG 0.357862 tig0028823:+36514 Msa1439610:CDS
TGGAAGTCTTAGACAACTTC+AGG 0.363351 tig0028823:+36561 Msa1439610:CDS
TTTAAGAAGTGCGGTGTATA+TGG 0.370811 tig0028823:-38003 None:intergenic
AGTAATTGCCTGAAGTAATA+GGG 0.377154 tig0028823:-35754 None:intergenic
CGGCATCGACGGTTGTCGAC+TGG 0.377291 tig0028823:+40972 Msa1439610:CDS
CGAATGGCTTCACAAAGAAA+TGG 0.379940 tig0028823:+33295 Msa1439610:CDS
TTTGAATGCTCAGCAGAGTT+TGG 0.382937 tig0028823:+40667 Msa1439610:CDS
GGAAGAAGGAGAAGAGAGAA+GGG 0.385063 tig0028823:+33516 Msa1439610:CDS
TTCTTAATGCGCAGGCTTGG+AGG 0.387723 tig0028823:+40192 Msa1439610:intron
GCTGTTTATTCTACTGTTAA+GGG 0.389280 tig0028823:+35492 Msa1439610:CDS
TCAAGCAGAAGCAGCGAAGC+TGG 0.397262 tig0028823:+35662 Msa1439610:CDS
AAAGTAAATGCTTGAAGTAC+TGG 0.399325 tig0028823:-41206 None:intergenic
TCATGCCTACTTTGTTCAAC+AGG 0.399440 tig0028823:+40369 Msa1439610:CDS
GGCTTAGTCGCTTCTTGGAC+CGG 0.403530 tig0028823:+33118 Msa1439610:five_prime_UTR
GAAGAGGATGCTTGATGAAC+GGG 0.405836 tig0028823:+33673 Msa1439610:CDS
AGAAGGAGGTTGAGAGGTTG+AGG 0.408148 tig0028823:+33579 Msa1439610:CDS
CGTGGATTCTTCCGTTGAAA+TGG 0.408715 tig0028823:+35437 Msa1439610:CDS
GAGTCCTCCCCTATTACTTC+AGG 0.412492 tig0028823:+35746 Msa1439610:CDS
TTAATGGTTGGATCTGATAC+TGG 0.414055 tig0028823:-33067 None:intergenic
GGAGAGGGATTCGGTGAAGA+AGG 0.415697 tig0028823:+33562 Msa1439610:CDS
GTAATAGGGGAGGACTCTTT+AGG 0.420923 tig0028823:-35740 None:intergenic
TGATGAGTGGTGGGAGCAAC+CGG 0.422273 tig0028823:+40952 Msa1439610:CDS
AGCATGTAGAGGCTATTATC+TGG 0.424373 tig0028823:-38744 None:intergenic
GGCTTGGAGGGTTCAGATGC+TGG 0.426927 tig0028823:+40205 Msa1439610:intron
CAGGCACTGCTTGAGGCCAT+CGG 0.427432 tig0028823:+39663 Msa1439610:intron
ATCGGGTCCAGTGGATCATC+TGG 0.429603 tig0028823:+39681 Msa1439610:CDS
ATGGATGTTTCCTCTTCTGA+TGG 0.430234 tig0028823:+36213 Msa1439610:CDS
AGTACTTCAAGCATTTACTT+TGG 0.430411 tig0028823:+41208 Msa1439610:CDS
TGCGTTGATGGAGAGGGATT+CGG 0.432482 tig0028823:+33553 Msa1439610:CDS
GCTGAGACCCGACATATTGA+TGG 0.433205 tig0028823:-39783 None:intergenic
ACTTCTCGTTCAATTGGGAT+TGG 0.433276 tig0028823:+36520 Msa1439610:CDS
TCGCTTCTTGGACCGGATAC+CGG 0.439475 tig0028823:+33125 Msa1439610:five_prime_UTR
GATGATCCGGTGTTTGTTGT+TGG 0.439934 tig0028823:-32969 None:intergenic
CGCACTTCTTAAAGCAAATA+CGG 0.440398 tig0028823:+38013 Msa1439610:CDS
CTGCCGCGGGAACATGATTC+CGG 0.443342 tig0028823:+33397 Msa1439610:CDS
GGATGGTGGTGGGAGGAAGA+AGG 0.444216 tig0028823:+33502 Msa1439610:CDS
GAATGTGAGGAGGAATATTA+CGG 0.449349 tig0028823:+33466 Msa1439610:CDS
ATATGAAAATAACATAGTTA+TGG 0.453264 tig0028823:+36194 Msa1439610:CDS
TGGTTCAGAAGCTAGTGTTT+TGG 0.454086 tig0028823:+40273 Msa1439610:CDS
AGGAAGAAGGAGAAGAGAGA+AGG 0.454517 tig0028823:+33515 Msa1439610:CDS
AGCTTCGCTGCTTCTGCTTG+AGG 0.455594 tig0028823:-35660 None:intergenic
ATGTTACTTCTCGTTCAATT+GGG 0.456308 tig0028823:+36515 Msa1439610:CDS
CACTAATTAGACTGTGTATC+CGG 0.457866 tig0028823:-33144 None:intergenic
TGATGGGCAGATTCCGGATG+AGG 0.464339 tig0028823:+35695 Msa1439610:CDS
CTTGGGGCTGATGTGCCTCC+AGG 0.466724 tig0028823:+36276 Msa1439610:CDS
GGGAAGAAGCGGAGAGGAAG+AGG 0.466854 tig0028823:+33657 Msa1439610:CDS
CATGCTTCCTTCTTCACCAC+AGG 0.472095 tig0028823:+38761 Msa1439610:CDS
TTCTGCAGCTTGATGAGTGG+TGG 0.472825 tig0028823:+40942 Msa1439610:intron
ATAACTGTTCTAACCTCATC+CGG 0.473562 tig0028823:-35708 None:intergenic
GAATAAAGACCTGTCTTTCA+AGG 0.474678 tig0028823:-36317 None:intergenic
AGGTTTCTTTCTTGTTCTTG+GGG 0.477971 tig0028823:-41274 None:intergenic
GTTATGTTATGTTTAATGGT+TGG 0.477982 tig0028823:-33079 None:intergenic
AAAACACCAGTCTTGAGTTC+AGG 0.477991 tig0028823:-40647 None:intergenic
TTAACTCTAATGAGTAAGAA+GGG 0.478353 tig0028823:-33023 None:intergenic
GACAGCAAGAGCTGGTGCTC+GGG 0.478476 tig0028823:+39746 Msa1439610:CDS
GTCGACTGGGTGACAGTGGA+TGG 0.478572 tig0028823:+40986 Msa1439610:CDS
TAGACTGTGTATCCGGTATC+CGG 0.478984 tig0028823:-33137 None:intergenic
AAATCAGCTCCTTGAAAGAC+AGG 0.479838 tig0028823:+36308 Msa1439610:CDS
GAAGGAGAAGAGAGAAGGGG+AGG 0.480900 tig0028823:+33520 Msa1439610:CDS
GGCCAATACGCCGCCAGCGC+CGG 0.481521 tig0028823:+33332 Msa1439610:CDS
TTCATCACATTGGCGGTCAT+AGG 0.482889 tig0028823:-35337 None:intergenic
AGGCACTGCTTGAGGCCATC+GGG 0.484747 tig0028823:+39664 Msa1439610:intron
CAAGCAGAAGCAGCGAAGCT+GGG 0.485794 tig0028823:+35663 Msa1439610:CDS
TTTAACTCTAATGAGTAAGA+AGG 0.489019 tig0028823:-33024 None:intergenic
ATCTTCGGCTTCTTTCCTCT+CGG 0.489665 tig0028823:-37919 None:intergenic
TTCAAGCATTTACTTTGGGA+TGG 0.490306 tig0028823:+41213 Msa1439610:CDS
GCAAAGGAAAGAGAAGTTGC+TGG 0.490620 tig0028823:+37837 Msa1439610:CDS
GTGAAGGGGATGGTGGTGGG+AGG 0.491173 tig0028823:+33495 Msa1439610:CDS
GAGAGAAGGGGAGGAAGTGG+AGG 0.492293 tig0028823:+33529 Msa1439610:CDS
GCAAGGGATGCTCAAAGATC+AGG 0.494346 tig0028823:+35414 Msa1439610:CDS
GCTTCTAACATGTTATGATC+AGG 0.495135 tig0028823:+41045 Msa1439610:CDS
TGGATGTTTCCTCTTCTGAT+GGG 0.496110 tig0028823:+36214 Msa1439610:CDS
TGCTGGTCTAGCATCCGTAC+TGG 0.496331 tig0028823:+40222 Msa1439610:CDS
TGACAGCAAGAGCTGGTGCT+CGG 0.497816 tig0028823:+39745 Msa1439610:CDS
GGCAATTCCATCAATATGTC+GGG 0.498007 tig0028823:+39776 Msa1439610:CDS
ACGCCACTTCCTTCGTAAGC+AGG 0.500417 tig0028823:-35627 None:intergenic
TTTCGGATCGATTCGACTGA+CGG 0.501011 tig0028823:-33371 None:intergenic
GGCATCGACGGTTGTCGACT+GGG 0.501409 tig0028823:+40973 Msa1439610:CDS
GAATGGCTTCACAAAGAAAT+GGG 0.502140 tig0028823:+33296 Msa1439610:CDS
GCTGCACTTCAGTATGCTGC+TGG 0.502447 tig0028823:+39804 Msa1439610:CDS
CTTTGTCTTGTGTTGAGTAG+AGG 0.504792 tig0028823:-32940 None:intergenic
AGCCATTCGAGTATCACTTC+CGG 0.507370 tig0028823:-33281 None:intergenic
TTATAAACCTGTGGTGAAGA+AGG 0.508261 tig0028823:-38768 None:intergenic
TTAATCTTGTCCATATTAGA+CGG 0.508890 tig0028823:+40314 Msa1439610:CDS
TGTTGTGAGGAGACAGAGGA+AGG 0.512237 tig0028823:+33604 Msa1439610:CDS
ATATTACGGTTCACGGTGAA+GGG 0.512455 tig0028823:+33480 Msa1439610:CDS
CAGGCATAAGCAAGTGATGT+TGG 0.512719 tig0028823:+35311 Msa1439610:intron
TTGCAAATATGTTTGGGGAT+TGG 0.513243 tig0028823:+40694 Msa1439610:CDS
CGGTGAAGAAGGAGGTTGAG+AGG 0.514023 tig0028823:+33573 Msa1439610:CDS
TTTCCTGCTTACGAAGGAAG+TGG 0.514296 tig0028823:+35624 Msa1439610:CDS
TCTGCAGCTTGATGAGTGGT+GGG 0.516666 tig0028823:+40943 Msa1439610:intron
ATCTTTCTGATGTGATGATC+CGG 0.516949 tig0028823:-32982 None:intergenic
AATATTACGGTTCACGGTGA+AGG 0.519453 tig0028823:+33479 Msa1439610:CDS
GGAGGTTGCGTTGATGGAGA+GGG 0.522089 tig0028823:+33547 Msa1439610:CDS
GGAATGTTGTGAGGAGACAG+AGG 0.522586 tig0028823:+33600 Msa1439610:CDS
CGAAATCGGAGAAGACGGTT+AGG 0.523499 tig0028823:+33444 Msa1439610:CDS
CGAGGATGCTAGAGGTTTCG+AGG 0.524771 tig0028823:+33636 Msa1439610:CDS
ACAATCTTCATCGCCGTCAC+CGG 0.528251 tig0028823:+33262 Msa1439610:CDS
AGCTGGTGCTCGGGATCCGT+CGG 0.529057 tig0028823:+39755 Msa1439610:CDS
TCGAAGCTTCATCACATTGG+CGG 0.529322 tig0028823:-35344 None:intergenic
AGCATCCGTACTGGAGTCCC+TGG 0.531380 tig0028823:+40231 Msa1439610:CDS
CACACTTCTGAAGAGAAAGA+AGG 0.534065 tig0028823:-41328 None:intergenic
ATAGTCCTGTTGAACAAAGT+AGG 0.534887 tig0028823:-40374 None:intergenic
TTAGTGACTCGTTATTGGAC+CGG 0.537065 tig0028823:+33161 Msa1439610:five_prime_UTR
GTCCAGTGGATCATCTGGAC+AGG 0.537413 tig0028823:+39686 Msa1439610:CDS
TGGAGGTTGCGTTGATGGAG+AGG 0.537697 tig0028823:+33546 Msa1439610:CDS
TCTTAATGCGCAGGCTTGGA+GGG 0.537896 tig0028823:+40193 Msa1439610:intron
TAATCTTGTCCATATTAGAC+GGG 0.538291 tig0028823:+40315 Msa1439610:CDS
ACACTTCTGAAGAGAAAGAA+GGG 0.539150 tig0028823:-41327 None:intergenic
TGAATCTCTTGTAGCTTACA+TGG 0.539346 tig0028823:+35581 Msa1439610:CDS
AAAACTATTTACCATTTCAA+CGG 0.539456 tig0028823:-35448 None:intergenic
TTTGTCTTGTGTTGAGTAGA+GGG 0.540267 tig0028823:-32939 None:intergenic
GCATATTCCCTTGCAGTCGA+TGG 0.540701 tig0028823:-38624 None:intergenic
GCGTTGTATTTCAGACATCA+AGG 0.541137 tig0028823:-37880 None:intergenic
GAAGAAGGAGAAGAGAGAAG+GGG 0.541221 tig0028823:+33517 Msa1439610:CDS
GTCAGCAACCATCGACTGCA+AGG 0.542373 tig0028823:+38616 Msa1439610:CDS
CAGTCGACAACCGTCGATGC+CGG 0.544298 tig0028823:-40971 None:intergenic
TTCTCGAAGCTTCATCACAT+TGG 0.544752 tig0028823:-35347 None:intergenic
GTTACTATATAAATCAAGCA+AGG 0.546325 tig0028823:+35397 Msa1439610:CDS
AGGAGGAATATTACGGTTCA+CGG 0.547542 tig0028823:+33473 Msa1439610:CDS
GAGGGATTCGGTGAAGAAGG+AGG 0.548565 tig0028823:+33565 Msa1439610:CDS
ATAACTAACTAACTCGATCT+CGG 0.550371 tig0028823:+33097 Msa1439610:five_prime_UTR
ACGGTGAAGGGGATGGTGGT+GGG 0.550521 tig0028823:+33492 Msa1439610:CDS
TCAGCTAGATGTTTGGGCAA+AGG 0.550594 tig0028823:+37821 Msa1439610:intron
TTGTTCAACAGGACTATGAA+AGG 0.552540 tig0028823:+40380 Msa1439610:CDS
GTTGAGTAGAGGGAAATTGT+TGG 0.553007 tig0028823:-32929 None:intergenic
GTGGGAGCAACCGGCATCGA+CGG 0.554649 tig0028823:+40961 Msa1439610:CDS
GACGTTTCAAGCAAAACTCC+AGG 0.555173 tig0028823:-40249 None:intergenic
TTCTTCTGCAGCTTGATGAG+TGG 0.555882 tig0028823:+40939 Msa1439610:intron
TAAACAATGCTGCAGAAGCA+AGG 0.557173 tig0028823:+36449 Msa1439610:CDS
TCTGGTTCAGGCACTGCTTG+AGG 0.561058 tig0028823:+39656 Msa1439610:intron
TTCCTGTCCAGATGATCCAC+TGG 0.561115 tig0028823:-39688 None:intergenic
TTTATGGAAATGGAAAACTT+GGG 0.564742 tig0028823:+36259 Msa1439610:CDS
CGGCAATTCCATCAATATGT+CGG 0.564930 tig0028823:+39775 Msa1439610:CDS
TCGAGTATCACTTCCGGTGA+CGG 0.566165 tig0028823:-33275 None:intergenic
TCAACAACAGCAGAACATGC+TGG 0.570268 tig0028823:-38663 None:intergenic
GAGCTGATGCAGAGATCTTG+AGG 0.571777 tig0028823:+35835 Msa1439610:CDS
AAACTTATGAAACGTCTGCA+TGG 0.572224 tig0028823:+36484 Msa1439610:CDS
ACGGTTCACGGTGAAGGGGA+TGG 0.572577 tig0028823:+33485 Msa1439610:CDS
GAGGGAAAAGAATATTAGAA+AGG 0.573113 tig0028823:+35554 Msa1439610:CDS
GGAGCCACCTCTCAAAATGT+TGG 0.573681 tig0028823:+36541 Msa1439610:CDS
CTTGAGGCCATCGGGTCCAG+TGG 0.580795 tig0028823:+39672 Msa1439610:CDS
CGTATTTGCTTTAAGAAGTG+CGG 0.581014 tig0028823:-38012 None:intergenic
AAACTCCAGGGACTCCAGTA+CGG 0.583455 tig0028823:-40236 None:intergenic
TGGTTGCCTGAACTCAAGAC+TGG 0.584766 tig0028823:+40641 Msa1439610:CDS
GGAAGAGGATGCTTGATGAA+CGG 0.585097 tig0028823:+33672 Msa1439610:CDS
AAACAATGCTGCAGAAGCAA+GGG 0.586745 tig0028823:+36450 Msa1439610:CDS
AGAACAAGAAAGAGCTGTCA+CGG 0.587048 tig0028823:+40613 Msa1439610:CDS
AGGAGAGCTCCCATCAGAAG+AGG 0.587302 tig0028823:-36223 None:intergenic
GCGGGAACATGATTCCGGTA+TGG 0.589206 tig0028823:+33402 Msa1439610:CDS
CCATAAAGTGGATACTGTAG+AGG 0.590208 tig0028823:-36243 None:intergenic
GAAGCTTGCAAATATGTTTG+GGG 0.591476 tig0028823:+40689 Msa1439610:CDS
AGAGGTTTCGAGGGAAGAAG+CGG 0.591929 tig0028823:+33646 Msa1439610:CDS
ACGTGCGAAATCGGAGAAGA+CGG 0.591994 tig0028823:+33439 Msa1439610:CDS
GAGGATGCTAGAGGTTTCGA+GGG 0.592917 tig0028823:+33637 Msa1439610:CDS
AAGCAGAAGCAGCGAAGCTG+GGG 0.592988 tig0028823:+35664 Msa1439610:CDS
GCATAAGCAAGTGATGTTGG+AGG 0.594477 tig0028823:+35314 Msa1439610:CDS
TGAGACTTCAAATAGTGCAA+AGG 0.605516 tig0028823:+38683 Msa1439610:CDS
TTACTATATAAATCAAGCAA+GGG 0.605937 tig0028823:+35398 Msa1439610:CDS
GAGTAGAGGGAAATTGTTGG+TGG 0.606278 tig0028823:-32926 None:intergenic
AGATGATCCACTGGACCCGA+TGG 0.607871 tig0028823:-39679 None:intergenic
TTATGGAAATGGAAAACTTG+GGG 0.612636 tig0028823:+36260 Msa1439610:CDS
TCGACTGGGTGACAGTGGAT+GGG 0.613672 tig0028823:+40987 Msa1439610:CDS
CACCGGAAGTGATACTCGAA+TGG 0.614871 tig0028823:+33279 Msa1439610:CDS
AAAATCAACAGGTGGAGGAG+AGG 0.616530 tig0028823:-41294 None:intergenic
CTGGCGGCGTATTGGCCGAG+TGG 0.620113 tig0028823:-33326 None:intergenic
GTTCACGGTGAAGGGGATGG+TGG 0.622464 tig0028823:+33488 Msa1439610:CDS
GGATGCTCAAAGATCAGGCG+TGG 0.622609 tig0028823:+35419 Msa1439610:CDS
TCTGATACTGGATGGTGGAG+TGG 0.622951 tig0028823:-33055 None:intergenic
GTAATTGCCTGAAGTAATAG+GGG 0.623240 tig0028823:-35753 None:intergenic
TAACTCTAATGAGTAAGAAG+GGG 0.623288 tig0028823:-33022 None:intergenic
ACAACACCAACAACAAACAC+CGG 0.624079 tig0028823:+32963 Msa1439610:five_prime_UTR
AGAGGTTGAGGAATGTTGTG+AGG 0.624388 tig0028823:+33591 Msa1439610:CDS
GGCTGCTTCACAGCAACTCG+AGG 0.627593 tig0028823:-41185 None:intergenic
GCACTTCAGTATGCTGCTGG+TGG 0.632432 tig0028823:+39807 Msa1439610:CDS
CACTTCTGAAGAGAAAGAAG+GGG 0.633656 tig0028823:-41326 None:intergenic
TTTGAAAGCGAGGATGCTAG+AGG 0.637353 tig0028823:+33628 Msa1439610:CDS
CATATTGATGGAATTGCCGA+CGG 0.639784 tig0028823:-39771 None:intergenic
TCAGCAACCATCGACTGCAA+GGG 0.640424 tig0028823:+38617 Msa1439610:CDS
GTGAAGAAGGAAGCATGTAG+AGG 0.641857 tig0028823:-38755 None:intergenic
AGACGGTTAGGAATGTGAGG+AGG 0.646417 tig0028823:+33456 Msa1439610:CDS
AGAGGAAGGATTTGAAAGCG+AGG 0.646849 tig0028823:+33618 Msa1439610:CDS
TATTACGGTTCACGGTGAAG+GGG 0.647653 tig0028823:+33481 Msa1439610:CDS
AGACGGGATCTTGTGCAAAG+TGG 0.651848 tig0028823:+40331 Msa1439610:CDS
GAAATGGGATACAGACCACT+CGG 0.655763 tig0028823:+33311 Msa1439610:CDS
AGAAGACGGTTAGGAATGTG+AGG 0.658381 tig0028823:+33453 Msa1439610:CDS
GTTACGAGGAAATTCCATAC+CGG 0.668082 tig0028823:-33416 None:intergenic
TTTCGAGGGAAGAAGCGGAG+AGG 0.668597 tig0028823:+33651 Msa1439610:CDS
TGCAAATGCAGAAATAAGTG+CGG 0.669100 tig0028823:+39716 Msa1439610:CDS
GGTTGTCGACTGGGTGACAG+TGG 0.670105 tig0028823:+40982 Msa1439610:CDS
ATTGCCTGAAGTAATAGGGG+AGG 0.671022 tig0028823:-35750 None:intergenic
ACGAGTTTAACTCAGTGACT+CGG 0.671811 tig0028823:-33215 None:intergenic
ACGTTTCAAGCAAAACTCCA+GGG 0.675911 tig0028823:-40248 None:intergenic
TGGTTGGATCTGATACTGGA+TGG 0.678955 tig0028823:-33063 None:intergenic
GGGGCTGATGTGCCTCCAGG+AGG 0.680711 tig0028823:+36279 Msa1439610:CDS
AAAGTAGGCATGATTCAACA+AGG 0.689759 tig0028823:-40359 None:intergenic
TTGGATCTGATACTGGATGG+TGG 0.699314 tig0028823:-33060 None:intergenic
ATACCGGAATCATGTTCCCG+CGG 0.700361 tig0028823:-33400 None:intergenic
ACTTCTGAAGAGAAAGAAGG+GGG 0.704062 tig0028823:-41325 None:intergenic
CTTATGAAACGTCTGCATGG+AGG 0.715108 tig0028823:+36487 Msa1439610:CDS
AATTGAACGAGAAGTAACAT+CGG 0.724131 tig0028823:-36512 None:intergenic
TGAATAAGTTATGTGCCGAG+AGG 0.730094 tig0028823:+37904 Msa1439610:CDS
CATTGTCATTGAAACCACGA+GGG 0.732985 tig0028823:+35536 Msa1439610:CDS
TCATTGTCATTGAAACCACG+AGG 0.733906 tig0028823:+35535 Msa1439610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTAAAAAAAAAAAAAATA+GGG - tig0028823:38540-38559 None:intergenic 0.0%
!! TTATTAAAAAAAAAAAAAAT+AGG - tig0028823:38541-38560 None:intergenic 0.0%
!!! ACAATTTTTATATATTTTGT+TGG + tig0028823:36766-36785 Msa1439610:intron 10.0%
!! TAAGTTCAATTAAATTATTT+AGG + tig0028823:37624-37643 Msa1439610:intron 10.0%
!!! TTTTTTTACATCAAAATTTA+TGG + tig0028823:37767-37786 Msa1439610:intron 10.0%
!!! GAATTGAAAATATTTTATAA+CGG - tig0028823:40034-40053 None:intergenic 10.0%
!! AATTTAGTAAATTCATTTAT+AGG + tig0028823:40449-40468 Msa1439610:intron 10.0%
!! TTAGTTAAGTTAAAAAAACT+CGG - tig0028823:33190-33209 None:intergenic 15.0%
!! ATAATAGACTATAAAGTTAT+TGG + tig0028823:34377-34396 Msa1439610:intron 15.0%
!!! TTTGTGACTATAATTTTTTA+AGG + tig0028823:35914-35933 Msa1439610:intron 15.0%
!! ATATGAAAATAACATAGTTA+TGG + tig0028823:36194-36213 Msa1439610:CDS 15.0%
!!! TTTAAAACTTATAGTGAATT+AGG + tig0028823:36593-36612 Msa1439610:intron 15.0%
!!! TATATTTAACTTGCTTAAAA+AGG - tig0028823:36620-36639 None:intergenic 15.0%
!!! ATTTTTTTTGATATAGTTCA+TGG + tig0028823:37388-37407 Msa1439610:intron 15.0%
!!! TTTTTTTTGATATAGTTCAT+GGG + tig0028823:37389-37408 Msa1439610:intron 15.0%
!!! ATTTTCATAATTAAACATGT+CGG - tig0028823:37519-37538 None:intergenic 15.0%
!!! AAATTTCTAGCATTAATAAT+TGG - tig0028823:37749-37768 None:intergenic 15.0%
!! AAATATATCTGTTGAAATTT+GGG - tig0028823:38400-38419 None:intergenic 15.0%
!! TAAATATATCTGTTGAAATT+TGG - tig0028823:38401-38420 None:intergenic 15.0%
!!! TATTTGATTTGCTAAAAAAA+AGG - tig0028823:39517-39536 None:intergenic 15.0%
!! CTTATATTTATCATATATTC+TGG + tig0028823:39638-39657 Msa1439610:intron 15.0%
!! GTTAGTTATGTTATGTTTAA+TGG - tig0028823:33086-33105 None:intergenic 20.0%
!! AACTACAAAACATCAAAATT+AGG - tig0028823:33729-33748 None:intergenic 20.0%
!!! TTTGATGTTTTGTAGTTAAT+TGG + tig0028823:33732-33751 Msa1439610:intron 20.0%
!! ATAAACTATGAAGTTATTGA+AGG + tig0028823:33876-33895 Msa1439610:intron 20.0%
!! TAAACTATGAAGTTATTGAA+GGG + tig0028823:33877-33896 Msa1439610:intron 20.0%
!! TATAAGAGATACTATTAAGA+AGG + tig0028823:34214-34233 Msa1439610:intron 20.0%
!! TGTATCAATGATATATTTGA+AGG + tig0028823:35211-35230 Msa1439610:intron 20.0%
!! TTACTATATAAATCAAGCAA+GGG + tig0028823:35398-35417 Msa1439610:CDS 20.0%
!! AAAACTATTTACCATTTCAA+CGG - tig0028823:35451-35470 None:intergenic 20.0%
!!! TGACTATAATTTTTTAAGGT+TGG + tig0028823:35918-35937 Msa1439610:intron 20.0%
!!! ATTTACAAAGCATTTAAAAG+AGG + tig0028823:36018-36037 Msa1439610:intron 20.0%
!! TAATTGAAAATATGCAAGTT+TGG - tig0028823:36167-36186 None:intergenic 20.0%
!!! AAACTTGCATATTTTCAATT+AGG + tig0028823:36166-36185 Msa1439610:intron 20.0%
!!! TTTTTGCTTAAATATAGAAC+TGG - tig0028823:36718-36737 None:intergenic 20.0%
!!! AATGTGTTATTGAAAATAGT+AGG + tig0028823:37014-37033 Msa1439610:intron 20.0%
!!! TTTCACATCTAATTATTTTG+AGG + tig0028823:37318-37337 Msa1439610:intron 20.0%
!! AATTATCAAATCAGATTTAC+AGG - tig0028823:37347-37366 None:intergenic 20.0%
!!! GTAAATCTGATTTGATAATT+TGG + tig0028823:37347-37366 Msa1439610:intron 20.0%
!!! TTTTTTTGATATAGTTCATG+GGG + tig0028823:37390-37409 Msa1439610:intron 20.0%
!!! GTTTTTAATTCAGTTTTACT+GGG - tig0028823:37438-37457 None:intergenic 20.0%
!! TAAAACTGAATTAAAAACCA+AGG + tig0028823:37440-37459 Msa1439610:intron 20.0%
!!! TTTTCATAATTAAACATGTC+GGG - tig0028823:37518-37537 None:intergenic 20.0%
!! TAAAAAATTTATTGTAGGGT+AGG + tig0028823:37551-37570 Msa1439610:intron 20.0%
!! TATTAAAAGCAAAGATTCAT+CGG - tig0028823:37606-37625 None:intergenic 20.0%
!!! AGAGTATTGGAAAATAAAAA+CGG - tig0028823:37652-37671 None:intergenic 20.0%
!!! TTTTACATCAAAATTTATGG+TGG + tig0028823:37770-37789 Msa1439610:intron 20.0%
!! TTTACATCAAAATTTATGGT+GGG + tig0028823:37771-37790 Msa1439610:intron 20.0%
!!! TTCATTGATTTCTGTATTTA+CGG + tig0028823:38050-38069 Msa1439610:intron 20.0%
!!! ATTTTGTTATTTGATATCGT+TGG + tig0028823:38169-38188 Msa1439610:intron 20.0%
!! AATATATCTGTTGAAATTTG+GGG - tig0028823:38399-38418 None:intergenic 20.0%
!! ATTTCAACAGATATATTTAC+TGG + tig0028823:38402-38421 Msa1439610:intron 20.0%
!!! TTTGTTTTCTTATATATTGC+AGG + tig0028823:38575-38594 Msa1439610:intron 20.0%
!! CAGTTATATTTAAATGAACT+TGG - tig0028823:38949-38968 None:intergenic 20.0%
!! TAAATATAACTGAAACAGAT+TGG + tig0028823:38957-38976 Msa1439610:intron 20.0%
!! AAATATAACTGAAACAGATT+GGG + tig0028823:38958-38977 Msa1439610:intron 20.0%
!! TATTGTTACTCATTAAACTA+CGG - tig0028823:39392-39411 None:intergenic 20.0%
!!! TTGATTTAAAACTTGATCAT+GGG - tig0028823:39461-39480 None:intergenic 20.0%
!!! TTTGATTTAAAACTTGATCA+TGG - tig0028823:39462-39481 None:intergenic 20.0%
!! AATATGCAATAGTAATATAG+AGG - tig0028823:40077-40096 None:intergenic 20.0%
!!! TTTCAAAGGTATTTACTATT+GGG + tig0028823:40121-40140 Msa1439610:intron 20.0%
!!! TGTTTTGGAAGATTTATTAA+AGG + tig0028823:40288-40307 Msa1439610:CDS 20.0%
!! AAATTATTAACTATGACTGT+AGG - tig0028823:40434-40453 None:intergenic 20.0%
!!! GACCAATTTTTCTTTAAATT+TGG + tig0028823:40586-40605 Msa1439610:CDS 20.0%
!! TGCCAAATTTAAAGAAAAAT+TGG - tig0028823:40591-40610 None:intergenic 20.0%
!!! CTTTTTCACATGATTATAAT+AGG - tig0028823:41026-41045 None:intergenic 20.0%
! TTAACTCTAATGAGTAAGAA+GGG - tig0028823:33026-33045 None:intergenic 25.0%
! TTTAACTCTAATGAGTAAGA+AGG - tig0028823:33027-33046 None:intergenic 25.0%
! GTTATGTTATGTTTAATGGT+TGG - tig0028823:33082-33101 None:intergenic 25.0%
!!! GTTAATTGGTGATTTTGATT+TGG + tig0028823:33746-33765 Msa1439610:intron 25.0%
!!! TTTGATTTTGCTCCTAATTA+AGG + tig0028823:33769-33788 Msa1439610:intron 25.0%
! TTCTTCACTAAACCTTAATT+AGG - tig0028823:33784-33803 None:intergenic 25.0%
!! GTATCTCTTATAGTTTTTCT+AGG - tig0028823:34206-34225 None:intergenic 25.0%
! ATTTATCACAAATTCAACCA+GGG - tig0028823:34356-34375 None:intergenic 25.0%
! TATTTATCACAAATTCAACC+AGG - tig0028823:34658-34677 None:intergenic 25.0%
!! TCGTGTTATTAAATTGTTAC+CGG - tig0028823:34883-34902 None:intergenic 25.0%
! CAACAATGATATTTAATCTC+AGG - tig0028823:35163-35182 None:intergenic 25.0%
! GTTACTATATAAATCAAGCA+AGG + tig0028823:35397-35416 Msa1439610:CDS 25.0%
!! TTTTAGTGCAAAAAATGAGA+AGG + tig0028823:35467-35486 Msa1439610:CDS 25.0%
!!! ATCAATTTTCTCTATTTCTC+TGG - tig0028823:35811-35830 None:intergenic 25.0%
!! TTATTGATGATTTCTACAGA+AGG - tig0028823:35945-35964 None:intergenic 25.0%
!!! GGATATTTTTTGGTAAAGTT+AGG - tig0028823:35985-36004 None:intergenic 25.0%
!! TTGTAAATTTAGCATTTTGG+CGG - tig0028823:36006-36025 None:intergenic 25.0%
!! GCTTTGTAAATTTAGCATTT+TGG - tig0028823:36009-36028 None:intergenic 25.0%
!! AAAGAGGCATACAATAATTT+AGG + tig0028823:36034-36053 Msa1439610:intron 25.0%
! ACAAATATACTATTGTACTC+TGG - tig0028823:36071-36090 None:intergenic 25.0%
! TTTATGGAAATGGAAAACTT+GGG + tig0028823:36259-36278 Msa1439610:CDS 25.0%
!! AGTGTTTATTAGAAGTTTTG+TGG - tig0028823:36691-36710 None:intergenic 25.0%
! TTCACTTTACAATGTAAATG+TGG + tig0028823:36881-36900 Msa1439610:intron 25.0%
!! TCACCTCATTTAATTTAAGT+TGG - tig0028823:37040-37059 None:intergenic 25.0%
! ACATGTTTACATGATTGATT+TGG + tig0028823:37228-37247 Msa1439610:intron 25.0%
!!! TTTTTTGATATAGTTCATGG+GGG + tig0028823:37391-37410 Msa1439610:intron 25.0%
!!! GGTTTTTAATTCAGTTTTAC+TGG - tig0028823:37439-37458 None:intergenic 25.0%
!!! CTTTTTTTTCAGAGAATCTT+CGG - tig0028823:37937-37956 None:intergenic 25.0%
!! AAGATTCTCTGAAAAAAAAG+TGG + tig0028823:37937-37956 Msa1439610:CDS 25.0%
! AAAAAGATTGAAGAGTTTGA+TGG + tig0028823:37960-37979 Msa1439610:CDS 25.0%
! ACAGACAAATATATTATCCT+AGG - tig0028823:38133-38152 None:intergenic 25.0%
! AATAACAAAATGCATCAACA+TGG - tig0028823:38160-38179 None:intergenic 25.0%
!!! TGATTTGCTAAAAAAAAGGT+TGG - tig0028823:39513-39532 None:intergenic 25.0%
!!! TTTATCATATATTCTGGTTC+AGG + tig0028823:39644-39663 Msa1439610:intron 25.0%
!!! ACAGATTCAATAGTTTTGTT+AGG - tig0028823:39980-39999 None:intergenic 25.0%
!!! GTTTCAAAGGTATTTACTAT+TGG + tig0028823:40120-40139 Msa1439610:intron 25.0%
!!! TTCAAAGGTATTTACTATTG+GGG + tig0028823:40122-40141 Msa1439610:intron 25.0%
! ATCATTTACTGCATTAGAAT+AGG - tig0028823:40171-40190 None:intergenic 25.0%
! TTAATCTTGTCCATATTAGA+CGG + tig0028823:40314-40333 Msa1439610:CDS 25.0%
! AATTCATTTATAGGTGTCAA+AGG + tig0028823:40458-40477 Msa1439610:intron 25.0%
! AAGCTTCAAACAAATTATCA+AGG - tig0028823:40528-40547 None:intergenic 25.0%
! GATATTTGATATAATGATGC+AGG + tig0028823:40561-40580 Msa1439610:intron 25.0%
! ATAGTTATCAAAGAAGAGAT+TGG - tig0028823:40887-40906 None:intergenic 25.0%
! AATCTAAAAAAATCAACAGG+TGG - tig0028823:41305-41324 None:intergenic 25.0%
TAACTCTAATGAGTAAGAAG+GGG - tig0028823:33025-33044 None:intergenic 30.0%
ATAACTAACTAACTCGATCT+CGG + tig0028823:33097-33116 Msa1439610:five_prime_UTR 30.0%
TCTAATTAGTGACTCGTTAT+TGG + tig0028823:33156-33175 Msa1439610:five_prime_UTR 30.0%
AGTTAAAAAAACTCGGTATC+CGG - tig0028823:33183-33202 None:intergenic 30.0%
CATTACTGTATTGTAATCAC+TGG + tig0028823:33805-33824 Msa1439610:intron 30.0%
TATGAAGTTATTGAAGGGAA+GGG + tig0028823:33882-33901 Msa1439610:intron 30.0%
! AAGGGAAGGGAAAATTTTAT+CGG + tig0028823:33895-33914 Msa1439610:intron 30.0%
ATGACAACATTAGAGAGAAT+TGG + tig0028823:34054-34073 Msa1439610:intron 30.0%
TGACAACATTAGAGAGAATT+GGG + tig0028823:34055-34074 Msa1439610:intron 30.0%
! AGATTAATGAGTTGGAGAAA+TGG + tig0028823:34243-34262 Msa1439610:intron 30.0%
TCTATAAACTTCACTCTCTT+TGG + tig0028823:34428-34447 Msa1439610:intron 30.0%
!! CACAAAGTGTTGTTAAATAG+CGG + tig0028823:34533-34552 Msa1439610:intron 30.0%
TTGCAGAATGCAAAATATAG+TGG - tig0028823:34595-34614 None:intergenic 30.0%
ATTGGACGATTCTTAATCTA+AGG - tig0028823:34629-34648 None:intergenic 30.0%
!! AATTTTCCTGGTTCTTCATT+GGG + tig0028823:34817-34836 Msa1439610:intron 30.0%
ACTATGTAGCATCATAACTT+CGG - tig0028823:34974-34993 None:intergenic 30.0%
TTTCTATCTCACAACAAAGT+CGG - tig0028823:35009-35028 None:intergenic 30.0%
TGAATGGTTGAGATAATTAG+TGG + tig0028823:35274-35293 Msa1439610:intron 30.0%
GAATGGTTGAGATAATTAGT+GGG + tig0028823:35275-35294 Msa1439610:intron 30.0%
TATAGTAACAGAGACGTTTA+TGG - tig0028823:35386-35405 None:intergenic 30.0%
AGCTGTTTATTCTACTGTTA+AGG + tig0028823:35491-35510 Msa1439610:CDS 30.0%
GCTGTTTATTCTACTGTTAA+GGG + tig0028823:35492-35511 Msa1439610:CDS 30.0%
GAGGGAAAAGAATATTAGAA+AGG + tig0028823:35554-35573 Msa1439610:CDS 30.0%
AGTAATTGCCTGAAGTAATA+GGG - tig0028823:35757-35776 None:intergenic 30.0%
ATATACTATTGTACTCTGGT+TGG - tig0028823:36067-36086 None:intergenic 30.0%
! AGTTTTCCATTTCCATAAAG+TGG - tig0028823:36258-36277 None:intergenic 30.0%
CTTTATGGAAATGGAAAACT+TGG + tig0028823:36258-36277 Msa1439610:CDS 30.0%
TTATGGAAATGGAAAACTTG+GGG + tig0028823:36260-36279 Msa1439610:CDS 30.0%
!!! CTTAGACTGAATAGTTTTGT+CGG + tig0028823:36343-36362 Msa1439610:intron 30.0%
AATTGAACGAGAAGTAACAT+CGG - tig0028823:36515-36534 None:intergenic 30.0%
! ATGTTACTTCTCGTTCAATT+GGG + tig0028823:36515-36534 Msa1439610:CDS 30.0%
!! GTTTATTAGAAGTTTTGTGG+TGG - tig0028823:36688-36707 None:intergenic 30.0%
TGCTTAAATATAGAACTGGA+GGG - tig0028823:36714-36733 None:intergenic 30.0%
TTGCTTAAATATAGAACTGG+AGG - tig0028823:36715-36734 None:intergenic 30.0%
TAATAACTGAACACAGACAA+GGG - tig0028823:36825-36844 None:intergenic 30.0%
AGGCCAACTTAAATTAAATG+AGG + tig0028823:37034-37053 Msa1439610:intron 30.0%
! TTTATGCTTCTGTTTGAAAC+CGG + tig0028823:37121-37140 Msa1439610:intron 30.0%
ACAAGTGTTCATAATTTCCT+TGG - tig0028823:37460-37479 None:intergenic 30.0%
TCCAATACTCTTCAAGAATT+AGG + tig0028823:37661-37680 Msa1439610:intron 30.0%
! TCCTAATTCTTGAAGAGTAT+TGG - tig0028823:37665-37684 None:intergenic 30.0%
! TGTATGAGTTGGAAGAAAAA+AGG + tig0028823:37693-37712 Msa1439610:intron 30.0%
ATAATTGGATAGAACAGAAC+AGG - tig0028823:37734-37753 None:intergenic 30.0%
GAATACATGTAAGTATAAGC+TGG - tig0028823:37803-37822 None:intergenic 30.0%
ATGTATTCAGCTAGATGTTT+GGG + tig0028823:37815-37834 Msa1439610:intron 30.0%
GGATAATATATTTGTCTGTG+TGG + tig0028823:38134-38153 Msa1439610:intron 30.0%
CTTGAGAAGAGTTTATAAAG+AGG + tig0028823:38328-38347 Msa1439610:intron 30.0%
ACTAGAAATATCCATTGTCT+AGG - tig0028823:38431-38450 None:intergenic 30.0%
AGGGAAAAATAATGTGTTGT+TGG - tig0028823:38521-38540 None:intergenic 30.0%
!!! AAGAAGTGTCTGCTTTTTAT+CGG + tig0028823:38718-38737 Msa1439610:CDS 30.0%
! ATTAGAGCATTATAAACCTG+TGG - tig0028823:38780-38799 None:intergenic 30.0%
ATTCAGATGAAACTGAAAGA+AGG + tig0028823:39021-39040 Msa1439610:intron 30.0%
CTGAAAGAAGGAAAATACAA+CGG + tig0028823:39033-39052 Msa1439610:intron 30.0%
TGAAAGAAGGAAAATACAAC+GGG + tig0028823:39034-39053 Msa1439610:intron 30.0%
GTATCTTGAGCTTTCATATT+TGG - tig0028823:39078-39097 None:intergenic 30.0%
! GGAAATTACTGAGGATTTTT+CGG + tig0028823:39250-39269 Msa1439610:intron 30.0%
CTCGTTCTCAAAAATGTATT+GGG - tig0028823:39543-39562 None:intergenic 30.0%
ATATCAGACATCTATGATAG+GGG - tig0028823:39888-39907 None:intergenic 30.0%
CATATCAGACATCTATGATA+GGG - tig0028823:39889-39908 None:intergenic 30.0%
TAGAGGACAAATATTGAGTA+AGG - tig0028823:40060-40079 None:intergenic 30.0%
ACTTACAAACGTAGTTTCAA+AGG + tig0028823:40107-40126 Msa1439610:intron 30.0%
!! TCAAAGGTATTTACTATTGG+GGG + tig0028823:40123-40142 Msa1439610:intron 30.0%
! AAATGATTTTCTTAATGCGC+AGG + tig0028823:40184-40203 Msa1439610:intron 30.0%
TAATCTTGTCCATATTAGAC+GGG + tig0028823:40315-40334 Msa1439610:CDS 30.0%
TATTAACTATGACTGTAGGT+AGG - tig0028823:40430-40449 None:intergenic 30.0%
!! AATTTCCAGCACTGTTTTAA+GGG - tig0028823:40754-40773 None:intergenic 30.0%
! AAATTTCCAGCACTGTTTTA+AGG - tig0028823:40755-40774 None:intergenic 30.0%
CAATTTGATATGCAATCTCT+TGG + tig0028823:40855-40874 Msa1439610:intron 30.0%
TGCAATGTAAGACTAGAAAT+GGG - tig0028823:40917-40936 None:intergenic 30.0%
TTGCAATGTAAGACTAGAAA+TGG - tig0028823:40918-40937 None:intergenic 30.0%
TAGAATTGTAATGCACCTAA+AGG + tig0028823:41083-41102 Msa1439610:intron 30.0%
AGAATTGTAATGCACCTAAA+GGG + tig0028823:41084-41103 Msa1439610:intron 30.0%
GAGAAAATTTAAGTCCCTTT+AGG - tig0028823:41101-41120 None:intergenic 30.0%
AAAGTAAATGCTTGAAGTAC+TGG - tig0028823:41209-41228 None:intergenic 30.0%
AGTACTTCAAGCATTTACTT+TGG + tig0028823:41208-41227 Msa1439610:CDS 30.0%
GTACTTCAAGCATTTACTTT+GGG + tig0028823:41209-41228 Msa1439610:CDS 30.0%
GGGAATCTAAAAAAATCAAC+AGG - tig0028823:41308-41327 None:intergenic 30.0%
TTTGTCTTGTGTTGAGTAGA+GGG - tig0028823:32942-32961 None:intergenic 35.0%
ATCTTTCTGATGTGATGATC+CGG - tig0028823:32985-33004 None:intergenic 35.0%
TAAGAAGGGGTTATTCTCTT+TGG - tig0028823:33012-33031 None:intergenic 35.0%
TTAATGGTTGGATCTGATAC+TGG - tig0028823:33070-33089 None:intergenic 35.0%
CACTAATTAGACTGTGTATC+CGG - tig0028823:33147-33166 None:intergenic 35.0%
GAATGGCTTCACAAAGAAAT+GGG + tig0028823:33296-33315 Msa1439610:CDS 35.0%
GAATGTGAGGAGGAATATTA+CGG + tig0028823:33466-33485 Msa1439610:CDS 35.0%
CTATGAAGTTATTGAAGGGA+AGG + tig0028823:33881-33900 Msa1439610:intron 35.0%
GACAACATTAGAGAGAATTG+GGG + tig0028823:34056-34075 Msa1439610:intron 35.0%
GAATTGGGGTATAGAAAAGA+TGG + tig0028823:34070-34089 Msa1439610:intron 35.0%
AGATGGTAGAAACTAGACTT+AGG + tig0028823:34087-34106 Msa1439610:intron 35.0%
GCATATAGATAGAAGAACTG+TGG + tig0028823:34118-34137 Msa1439610:intron 35.0%
! GAACTGTGGATTTTGTAGTT+AGG + tig0028823:34132-34151 Msa1439610:intron 35.0%
AGTTAGGAGAGTAGATTAGA+TGG + tig0028823:34148-34167 Msa1439610:intron 35.0%
GGATCTAGAGATTAATGAGT+TGG + tig0028823:34235-34254 Msa1439610:intron 35.0%
TATGTATCCGATTCACTTAG+TGG + tig0028823:34297-34316 Msa1439610:intron 35.0%
ATGTATCCGATTCACTTAGT+GGG + tig0028823:34298-34317 Msa1439610:intron 35.0%
TCTTATCCCACTAAGTGAAT+CGG - tig0028823:34307-34326 None:intergenic 35.0%
GGTTTAGTGTTGTCATATAG+CGG + tig0028823:34449-34468 Msa1439610:intron 35.0%
ACAGTGCATCATGAAACAAT+GGG - tig0028823:34509-34528 None:intergenic 35.0%
AACAGTGCATCATGAAACAA+TGG - tig0028823:34510-34529 None:intergenic 35.0%
!! GAATTTTCCTGGTTCTTCAT+TGG + tig0028823:34816-34835 Msa1439610:intron 35.0%
GCAAAAAGATGAATAAGCCA+TGG + tig0028823:34839-34858 Msa1439610:intron 35.0%
CTGAATGTTATTACATGTGC+CGG + tig0028823:34909-34928 Msa1439610:intron 35.0%
TGGTAGTCGAAACTAAAAAC+TGG + tig0028823:35051-35070 Msa1439610:intron 35.0%
ATCACCTTGATTATTGTCGT+AGG + tig0028823:35100-35119 Msa1439610:intron 35.0%
TATGCCTACGACAATAATCA+AGG - tig0028823:35107-35126 None:intergenic 35.0%
TTATTGTCGTAGGCATATTG+TGG + tig0028823:35110-35129 Msa1439610:intron 35.0%
! TAATGAACGTGTCATTGTTC+TGG + tig0028823:35248-35267 Msa1439610:intron 35.0%
! TCTAATATTCTTTTCCCTCG+TGG - tig0028823:35553-35572 None:intergenic 35.0%
TGAATCTCTTGTAGCTTACA+TGG + tig0028823:35581-35600 Msa1439610:CDS 35.0%
ATAACTGTTCTAACCTCATC+CGG - tig0028823:35711-35730 None:intergenic 35.0%
GTAATTGCCTGAAGTAATAG+GGG - tig0028823:35756-35775 None:intergenic 35.0%
CAGTAATTGCCTGAAGTAAT+AGG - tig0028823:35758-35777 None:intergenic 35.0%
!! GCATTTTGGCGGATATTTTT+TGG - tig0028823:35995-36014 None:intergenic 35.0%
CAGTATCCACTTTATGGAAA+TGG + tig0028823:36249-36268 Msa1439610:CDS 35.0%
GAATAAAGACCTGTCTTTCA+AGG - tig0028823:36320-36339 None:intergenic 35.0%
CGACAAAACTATTCAGTCTA+AGG - tig0028823:36345-36364 None:intergenic 35.0%
TGTGAACAGAGATACAACAT+TGG - tig0028823:36388-36407 None:intergenic 35.0%
AAACTTATGAAACGTCTGCA+TGG + tig0028823:36484-36503 Msa1439610:CDS 35.0%
! GATGTTACTTCTCGTTCAAT+TGG + tig0028823:36514-36533 Msa1439610:CDS 35.0%
! AAGACTTCCAACATTTTGAG+AGG - tig0028823:36551-36570 None:intergenic 35.0%
CTAATAACTGAACACAGACA+AGG - tig0028823:36826-36845 None:intergenic 35.0%
TGTGAATTAACGATGTTCAG+TGG + tig0028823:36854-36873 Msa1439610:intron 35.0%
!! AGACCTTTATGCTCTGAAAT+GGG + tig0028823:36921-36940 Msa1439610:intron 35.0%
CAAGAAGAAGATAAGATGGA+CGG - tig0028823:36956-36975 None:intergenic 35.0%
CTTCCAAGAAGAAGATAAGA+TGG - tig0028823:36960-36979 None:intergenic 35.0%
CTTATCTTCTTCTTGGAAGA+TGG + tig0028823:36961-36980 Msa1439610:intron 35.0%
GACAATGTCTGAATAAACAC+TGG - tig0028823:37171-37190 None:intergenic 35.0%
! GGATTTTCTACTGTATGAGT+TGG + tig0028823:37682-37701 Msa1439610:intron 35.0%
CATGTATTCAGCTAGATGTT+TGG + tig0028823:37814-37833 Msa1439610:intron 35.0%
!! AAGAGAAGTTGCTGGTTTAA+AGG + tig0028823:37845-37864 Msa1439610:CDS 35.0%
! TTTAAGAAGTGCGGTGTATA+TGG - tig0028823:38006-38025 None:intergenic 35.0%
!! CGTATTTGCTTTAAGAAGTG+CGG - tig0028823:38015-38034 None:intergenic 35.0%
CGCACTTCTTAAAGCAAATA+CGG + tig0028823:38013-38032 Msa1439610:CDS 35.0%
GGTAATAATGGTTCCTTGTT+TGG + tig0028823:38105-38124 Msa1439610:intron 35.0%
ATTATCCTAGGATCCAAACA+AGG - tig0028823:38121-38140 None:intergenic 35.0%
GAGAAGAGTTTATAAAGAGG+AGG + tig0028823:38331-38350 Msa1439610:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG - tig0028823:38375-38394 None:intergenic 35.0%
AAATGAATACCATTAAGGCC+TGG - tig0028823:38476-38495 None:intergenic 35.0%
GAGGGAAATGAATACCATTA+AGG - tig0028823:38481-38500 None:intergenic 35.0%
TGAGACTTCAAATAGTGCAA+AGG + tig0028823:38683-38702 Msa1439610:CDS 35.0%
TTATAAACCTGTGGTGAAGA+AGG - tig0028823:38771-38790 None:intergenic 35.0%
!! GACACAATGTTCTGAGTTTT+TGG + tig0028823:38833-38852 Msa1439610:intron 35.0%
!! ATGTTCTGAGTTTTTGGATC+AGG + tig0028823:38839-38858 Msa1439610:intron 35.0%
!! TGTTCTGAGTTTTTGGATCA+GGG + tig0028823:38840-38859 Msa1439610:intron 35.0%
!! TCTTTATGGAGGTGTACTTT+TGG - tig0028823:38868-38887 None:intergenic 35.0%
ACCTCCATAAAGATGCTTTA+TGG + tig0028823:38875-38894 Msa1439610:intron 35.0%
! TCCATAAAGCATCTTTATGG+AGG - tig0028823:38879-38898 None:intergenic 35.0%
TCCATAAAGATGCTTTATGG+AGG + tig0028823:38878-38897 Msa1439610:intron 35.0%
! ACCTCCATAAAGCATCTTTA+TGG - tig0028823:38882-38901 None:intergenic 35.0%
TGGAAACTATGACTACCAAA+CGG - tig0028823:38929-38948 None:intergenic 35.0%
GAAAGAAGGAAAATACAACG+GGG + tig0028823:39035-39054 Msa1439610:intron 35.0%
AAAGAAGGAAAATACAACGG+GGG + tig0028823:39036-39055 Msa1439610:intron 35.0%
TGAAAGCTCAAGATACAATG+AGG + tig0028823:39082-39101 Msa1439610:intron 35.0%
! CAGTGTAATTTTTGCGTATC+AGG + tig0028823:39120-39139 Msa1439610:intron 35.0%
CCTAGACTTCTTATAGGATA+GGG - tig0028823:39188-39207 None:intergenic 35.0%
TCCTAGACTTCTTATAGGAT+AGG - tig0028823:39189-39208 None:intergenic 35.0%
CCTCGTTCTCAAAAATGTAT+TGG - tig0028823:39544-39563 None:intergenic 35.0%
!! CCAATACATTTTTGAGAACG+AGG + tig0028823:39541-39560 Msa1439610:intron 35.0%
! TGAGAACGAGGAACTTTTAA+TGG + tig0028823:39553-39572 Msa1439610:intron 35.0%
TGCAAATGCAGAAATAAGTG+CGG + tig0028823:39716-39735 Msa1439610:CDS 35.0%
ATTATTGTTCATGCGCTGAA+AGG + tig0028823:39840-39859 Msa1439610:intron 35.0%
CCATATCAGACATCTATGAT+AGG - tig0028823:39890-39909 None:intergenic 35.0%
CCTATCATAGATGTCTGATA+TGG + tig0028823:39887-39906 Msa1439610:intron 35.0%
ATCATAGATGTCTGATATGG+AGG + tig0028823:39890-39909 Msa1439610:intron 35.0%
!!! GATGGAAGTTCTTGTTGTTT+TGG + tig0028823:39922-39941 Msa1439610:intron 35.0%
AAAGTAGGCATGATTCAACA+AGG - tig0028823:40362-40381 None:intergenic 35.0%
ATAGTCCTGTTGAACAAAGT+AGG - tig0028823:40377-40396 None:intergenic 35.0%
TTGTTCAACAGGACTATGAA+AGG + tig0028823:40380-40399 Msa1439610:CDS 35.0%
AGGTTTGAATCTGAAAGAGA+TGG - tig0028823:40508-40527 None:intergenic 35.0%
TGGAAGCTTGCAAATATGTT+TGG + tig0028823:40687-40706 Msa1439610:CDS 35.0%
GGAAGCTTGCAAATATGTTT+GGG + tig0028823:40688-40707 Msa1439610:CDS 35.0%
GAAGCTTGCAAATATGTTTG+GGG + tig0028823:40689-40708 Msa1439610:CDS 35.0%
TTGCAAATATGTTTGGGGAT+TGG + tig0028823:40694-40713 Msa1439610:CDS 35.0%
! AAAACAGTGCTGGAAATTTC+AGG + tig0028823:40756-40775 Msa1439610:intron 35.0%
GCTTCTAACATGTTATGATC+AGG + tig0028823:41045-41064 Msa1439610:CDS 35.0%
GGGAATTGTTTAGACAATCT+GGG - tig0028823:41128-41147 None:intergenic 35.0%
TGGGAATTGTTTAGACAATC+TGG - tig0028823:41129-41148 None:intergenic 35.0%
TTCAATGTCGATAGCAAAGT+GGG - tig0028823:41148-41167 None:intergenic 35.0%
! TTCAAGCATTTACTTTGGGA+TGG + tig0028823:41213-41232 Msa1439610:CDS 35.0%
AGGTTTCTTTCTTGTTCTTG+GGG - tig0028823:41277-41296 None:intergenic 35.0%
GAGGTTTCTTTCTTGTTCTT+GGG - tig0028823:41278-41297 None:intergenic 35.0%
AGAGGTTTCTTTCTTGTTCT+TGG - tig0028823:41279-41298 None:intergenic 35.0%
CTAAAAAAATCAACAGGTGG+AGG - tig0028823:41302-41321 None:intergenic 35.0%
! ACACTTCTGAAGAGAAAGAA+GGG - tig0028823:41330-41349 None:intergenic 35.0%
GTTGAGTAGAGGGAAATTGT+TGG - tig0028823:32932-32951 None:intergenic 40.0%
CTTTGTCTTGTGTTGAGTAG+AGG - tig0028823:32943-32962 None:intergenic 40.0%
ACAACACCAACAACAAACAC+CGG + tig0028823:32963-32982 Msa1439610:five_prime_UTR 40.0%
TTAGTGACTCGTTATTGGAC+CGG + tig0028823:33161-33180 Msa1439610:five_prime_UTR 40.0%
ACGAGTTTAACTCAGTGACT+CGG - tig0028823:33218-33237 None:intergenic 40.0%
CGAATGGCTTCACAAAGAAA+TGG + tig0028823:33295-33314 Msa1439610:CDS 40.0%
GTTACGAGGAAATTCCATAC+CGG - tig0028823:33419-33438 None:intergenic 40.0%
AGGAGGAATATTACGGTTCA+CGG + tig0028823:33473-33492 Msa1439610:CDS 40.0%
AATATTACGGTTCACGGTGA+AGG + tig0028823:33479-33498 Msa1439610:CDS 40.0%
ATATTACGGTTCACGGTGAA+GGG + tig0028823:33480-33499 Msa1439610:CDS 40.0%
! GGGAAAATTTTATCGGACAG+TGG + tig0028823:33902-33921 Msa1439610:intron 40.0%
AGTTAAGCGTAACAGAGATG+AGG + tig0028823:33985-34004 Msa1439610:intron 40.0%
TGGTAGAAACTAGACTTAGG+TGG + tig0028823:34090-34109 Msa1439610:intron 40.0%
AAACTAGACTTAGGTGGTCT+GGG + tig0028823:34096-34115 Msa1439610:intron 40.0%
TAGGAGAGTAGATTAGATGG+AGG + tig0028823:34151-34170 Msa1439610:intron 40.0%
AGGAGAGTAGATTAGATGGA+GGG + tig0028823:34152-34171 Msa1439610:intron 40.0%
TCACTTAGTGGGATAAGACT+TGG + tig0028823:34309-34328 Msa1439610:intron 40.0%
TTCAACCAGTGATTGCACTA+CGG - tig0028823:34344-34363 None:intergenic 40.0%
ATCACAAATTCAACCAGGGA+TGG - tig0028823:34653-34672 None:intergenic 40.0%
CTCTCCATAGATGAGTCAAA+TGG + tig0028823:34759-34778 Msa1439610:intron 40.0%
GGAACCATTTGACTCATCTA+TGG - tig0028823:34766-34785 None:intergenic 40.0%
! CAAGTGCTACTAACAACACA+AGG - tig0028823:34787-34806 None:intergenic 40.0%
! CTTGTGTTGTTAGTAGCACT+TGG + tig0028823:34785-34804 Msa1439610:intron 40.0%
TTAGTAGCACTTGGTTGAAG+TGG + tig0028823:34794-34813 Msa1439610:intron 40.0%
! TGGTTGAAGTGGAATTTTCC+TGG + tig0028823:34805-34824 Msa1439610:intron 40.0%
! TTTTTGCCCAATGAAGAACC+AGG - tig0028823:34826-34845 None:intergenic 40.0%
! CTTCGGATTGAAAGCATGTT+CGG - tig0028823:34957-34976 None:intergenic 40.0%
!!! GAAAGAACACTTTTTCCTGC+TGG + tig0028823:35025-35044 Msa1439610:intron 40.0%
! GTCATTGTTCTGGCATTGAA+TGG + tig0028823:35258-35277 Msa1439610:intron 40.0%
TTCTCGAAGCTTCATCACAT+TGG - tig0028823:35350-35369 None:intergenic 40.0%
TCATTGTCATTGAAACCACG+AGG + tig0028823:35535-35554 Msa1439610:CDS 40.0%
CATTGTCATTGAAACCACGA+GGG + tig0028823:35536-35555 Msa1439610:CDS 40.0%
! AGTTCTTTTCCTGCTTACGA+AGG + tig0028823:35618-35637 Msa1439610:CDS 40.0%
!! AAGCTGGGGTTTGATTTTGA+TGG + tig0028823:35678-35697 Msa1439610:CDS 40.0%
!! AGCTGGGGTTTGATTTTGAT+GGG + tig0028823:35679-35698 Msa1439610:CDS 40.0%
!! TGATTTTGATGGGCAGATTC+CGG + tig0028823:35689-35708 Msa1439610:CDS 40.0%
ATGGATGTTTCCTCTTCTGA+TGG + tig0028823:36213-36232 Msa1439610:CDS 40.0%
TGGATGTTTCCTCTTCTGAT+GGG + tig0028823:36214-36233 Msa1439610:CDS 40.0%
CCATAAAGTGGATACTGTAG+AGG - tig0028823:36246-36265 None:intergenic 40.0%
CCTCTACAGTATCCACTTTA+TGG + tig0028823:36243-36262 Msa1439610:CDS 40.0%
AAATCAGCTCCTTGAAAGAC+AGG + tig0028823:36308-36327 Msa1439610:CDS 40.0%
! AGCTCATGTTCAGCAGTTTT+TGG + tig0028823:36411-36430 Msa1439610:CDS 40.0%
TAAACAATGCTGCAGAAGCA+AGG + tig0028823:36449-36468 Msa1439610:CDS 40.0%
AAACAATGCTGCAGAAGCAA+GGG + tig0028823:36450-36469 Msa1439610:CDS 40.0%
ACTTCTCGTTCAATTGGGAT+TGG + tig0028823:36520-36539 Msa1439610:CDS 40.0%
!! ACTTCCAACATTTTGAGAGG+TGG - tig0028823:36548-36567 None:intergenic 40.0%
TGGAAGTCTTAGACAACTTC+AGG + tig0028823:36561-36580 Msa1439610:CDS 40.0%
!! AGAAGTTTTGTGGTGGTAGT+AGG - tig0028823:36681-36700 None:intergenic 40.0%
AACACAGACAAGGGTAATTC+GGG - tig0028823:36816-36835 None:intergenic 40.0%
GAACACAGACAAGGGTAATT+CGG - tig0028823:36817-36836 None:intergenic 40.0%
!! CAGACCTTTATGCTCTGAAA+TGG + tig0028823:36920-36939 Msa1439610:intron 40.0%
CTTCCCATTTCAGAGCATAA+AGG - tig0028823:36927-36946 None:intergenic 40.0%
CGTCCATCTTATCTTCTTCT+TGG + tig0028823:36954-36973 Msa1439610:intron 40.0%
CAACTATTAGTTACTCCCTC+CGG - tig0028823:37143-37162 None:intergenic 40.0%
GACATTGTCTTAAGCTGCTT+TGG + tig0028823:37182-37201 Msa1439610:intron 40.0%
ATAGTTCATGGGGGAAGATT+AGG + tig0028823:37400-37419 Msa1439610:intron 40.0%
GCGTTGTATTTCAGACATCA+AGG - tig0028823:37883-37902 None:intergenic 40.0%
TGTACTTATTGCCAAGCCTT+GGG + tig0028823:38084-38103 Msa1439610:intron 40.0%
AACCATTATTACCCAAGGCT+TGG - tig0028823:38098-38117 None:intergenic 40.0%
CAAGGAACCATTATTACCCA+AGG - tig0028823:38103-38122 None:intergenic 40.0%
TGGAAATTCCGCCTTAATTG+CGG + tig0028823:38189-38208 Msa1439610:intron 40.0%
CTAACCAAAGGTCGCAATTT+AGG - tig0028823:38229-38248 None:intergenic 40.0%
!! CTTCATTGTGTTGGCTTTGA+GGG + tig0028823:38271-38290 Msa1439610:intron 40.0%
!! TTCATTGTGTTGGCTTTGAG+GGG + tig0028823:38272-38291 Msa1439610:intron 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG + tig0028823:38373-38392 Msa1439610:intron 40.0%
! TTTACTGGCTACCTAGACAA+TGG + tig0028823:38417-38436 Msa1439610:intron 40.0%
AGCATGTAGAGGCTATTATC+TGG - tig0028823:38747-38766 None:intergenic 40.0%
!! GCTTTATGGAGGTGTACTTT+TGG + tig0028823:38889-38908 Msa1439610:intron 40.0%
GATCTTCCATTTCTACCGTT+TGG + tig0028823:38911-38930 Msa1439610:intron 40.0%
TGACTACCAAACGGTAGAAA+TGG - tig0028823:38920-38939 None:intergenic 40.0%
AAGAAGGAAAATACAACGGG+GGG + tig0028823:39037-39056 Msa1439610:intron 40.0%
CCCTATCCTATAAGAAGTCT+AGG + tig0028823:39185-39204 Msa1439610:intron 40.0%
CTTGCTCCTAGACTTCTTAT+AGG - tig0028823:39194-39213 None:intergenic 40.0%
TCCTCTGATTATTCTGCAAG+AGG + tig0028823:39280-39299 Msa1439610:intron 40.0%
TCTGATTATTCTGCAAGAGG+CGG + tig0028823:39283-39302 Msa1439610:intron 40.0%
AAAGTTGCATGTGAGAGAAG+TGG + tig0028823:39306-39325 Msa1439610:intron 40.0%
ACAGAGCAAAACAAGGGATA+CGG - tig0028823:39438-39457 None:intergenic 40.0%
CATATTGATGGAATTGCCGA+CGG - tig0028823:39774-39793 None:intergenic 40.0%
CGGCAATTCCATCAATATGT+CGG + tig0028823:39775-39794 Msa1439610:CDS 40.0%
GGCAATTCCATCAATATGTC+GGG + tig0028823:39776-39795 Msa1439610:CDS 40.0%
AACAACAAGAACTTCCATCC+TGG - tig0028823:39921-39940 None:intergenic 40.0%
! ATTTTCTTAATGCGCAGGCT+TGG + tig0028823:40189-40208 Msa1439610:intron 40.0%
ACGTTTCAAGCAAAACTCCA+GGG - tig0028823:40251-40270 None:intergenic 40.0%
! TGGTTCAGAAGCTAGTGTTT+TGG + tig0028823:40273-40292 Msa1439610:CDS 40.0%
TCATGCCTACTTTGTTCAAC+AGG + tig0028823:40369-40388 Msa1439610:CDS 40.0%
TATGACTGTAGGTAGGATTC+GGG - tig0028823:40423-40442 None:intergenic 40.0%
CTATGACTGTAGGTAGGATT+CGG - tig0028823:40424-40443 None:intergenic 40.0%
AGAACAAGAAAGAGCTGTCA+CGG + tig0028823:40613-40632 Msa1439610:CDS 40.0%
AAAGAGCTGTCACGGAAAAA+TGG + tig0028823:40621-40640 Msa1439610:CDS 40.0%
AAAACACCAGTCTTGAGTTC+AGG - tig0028823:40650-40669 None:intergenic 40.0%
TTTGAATGCTCAGCAGAGTT+TGG + tig0028823:40667-40686 Msa1439610:CDS 40.0%
GATATCCCTTAAAACAGTGC+TGG + tig0028823:40746-40765 Msa1439610:intron 40.0%
CTTCAATGTCGATAGCAAAG+TGG - tig0028823:41149-41168 None:intergenic 40.0%
! TCTTGTTCTTGGGGTTTTCT+TGG - tig0028823:41268-41287 None:intergenic 40.0%
! ACTTCTGAAGAGAAAGAAGG+GGG - tig0028823:41328-41347 None:intergenic 40.0%
! CACTTCTGAAGAGAAAGAAG+GGG - tig0028823:41329-41348 None:intergenic 40.0%
! CACACTTCTGAAGAGAAAGA+AGG - tig0028823:41331-41350 None:intergenic 40.0%
!! GATGATCCGGTGTTTGTTGT+TGG - tig0028823:32972-32991 None:intergenic 45.0%
TTGGATCTGATACTGGATGG+TGG - tig0028823:33063-33082 None:intergenic 45.0%
TGGTTGGATCTGATACTGGA+TGG - tig0028823:33066-33085 None:intergenic 45.0%
TAGACTGTGTATCCGGTATC+CGG - tig0028823:33140-33159 None:intergenic 45.0%
AGCCATTCGAGTATCACTTC+CGG - tig0028823:33284-33303 None:intergenic 45.0%
GAAATGGGATACAGACCACT+CGG + tig0028823:33311-33330 Msa1439610:CDS 45.0%
!! TTTCGGATCGATTCGACTGA+CGG - tig0028823:33374-33393 None:intergenic 45.0%
AGAAGACGGTTAGGAATGTG+AGG + tig0028823:33453-33472 Msa1439610:CDS 45.0%
TATTACGGTTCACGGTGAAG+GGG + tig0028823:33481-33500 Msa1439610:CDS 45.0%
AGGAAGAAGGAGAAGAGAGA+AGG + tig0028823:33515-33534 Msa1439610:CDS 45.0%
GGAAGAAGGAGAAGAGAGAA+GGG + tig0028823:33516-33535 Msa1439610:CDS 45.0%
GAAGAAGGAGAAGAGAGAAG+GGG + tig0028823:33517-33536 Msa1439610:CDS 45.0%
AGAGGTTGAGGAATGTTGTG+AGG + tig0028823:33591-33610 Msa1439610:CDS 45.0%
AGAGGAAGGATTTGAAAGCG+AGG + tig0028823:33618-33637 Msa1439610:CDS 45.0%
TTTGAAAGCGAGGATGCTAG+AGG + tig0028823:33628-33647 Msa1439610:CDS 45.0%
GGAAGAGGATGCTTGATGAA+CGG + tig0028823:33672-33691 Msa1439610:CDS 45.0%
GAAGAGGATGCTTGATGAAC+GGG + tig0028823:33673-33692 Msa1439610:CDS 45.0%
TTGATGAACGGGCGAATTAC+AGG + tig0028823:33684-33703 Msa1439610:CDS 45.0%
! AACGGGCGAATTACAGGTTT+TGG + tig0028823:33690-33709 Msa1439610:intron 45.0%
TTATCGGACAGTGGTAAGAC+TGG + tig0028823:33911-33930 Msa1439610:intron 45.0%
CGCTTAACTTATGTTCGTGC+CGG - tig0028823:33974-33993 None:intergenic 45.0%
GGATGTGTGAGAAGACTAGA+CGG + tig0028823:34018-34037 Msa1439610:intron 45.0%
GAAACTAGACTTAGGTGGTC+TGG + tig0028823:34095-34114 Msa1439610:intron 45.0%
GGAGAGTAGATTAGATGGAG+GGG + tig0028823:34153-34172 Msa1439610:intron 45.0%
GAGCCAAATCACTAGAGGTA+GGG + tig0028823:34175-34194 Msa1439610:intron 45.0%
AGCCAAATCACTAGAGGTAG+GGG + tig0028823:34176-34195 Msa1439610:intron 45.0%
TTCCCCTACCTCTAGTGATT+TGG - tig0028823:34181-34200 None:intergenic 45.0%
CTTAGTGGGATAAGACTTGG+TGG + tig0028823:34312-34331 Msa1439610:intron 45.0%
TAAGACCGTAGTGCAATCAC+TGG + tig0028823:34336-34355 Msa1439610:intron 45.0%
AATTCAACCAGGGATGGCAT+TGG - tig0028823:34647-34666 None:intergenic 45.0%
GTCTATGTGTCAGTGTTCCA+TGG - tig0028823:34859-34878 None:intergenic 45.0%
GAACACTGACACATAGACAC+CGG + tig0028823:34861-34880 Msa1439610:intron 45.0%
!!! ACACTTTTTCCTGCTGGCTT+TGG + tig0028823:35031-35050 Msa1439610:intron 45.0%
CAGGCATAAGCAAGTGATGT+TGG + tig0028823:35311-35330 Msa1439610:intron 45.0%
GCATAAGCAAGTGATGTTGG+AGG + tig0028823:35314-35333 Msa1439610:CDS 45.0%
TTCATCACATTGGCGGTCAT+AGG - tig0028823:35340-35359 None:intergenic 45.0%
TCGAAGCTTCATCACATTGG+CGG - tig0028823:35347-35366 None:intergenic 45.0%
CGTGGATTCTTCCGTTGAAA+TGG + tig0028823:35437-35456 Msa1439610:CDS 45.0%
TTTCCTGCTTACGAAGGAAG+TGG + tig0028823:35624-35643 Msa1439610:CDS 45.0%
GTAATAGGGGAGGACTCTTT+AGG - tig0028823:35743-35762 None:intergenic 45.0%
ATTGCCTGAAGTAATAGGGG+AGG - tig0028823:35753-35772 None:intergenic 45.0%
TATTGTACTCTGGTTGGCAG+GGG - tig0028823:36061-36080 None:intergenic 45.0%
CTATTGTACTCTGGTTGGCA+GGG - tig0028823:36062-36081 None:intergenic 45.0%
ACTATTGTACTCTGGTTGGC+AGG - tig0028823:36063-36082 None:intergenic 45.0%
!!! TGATTTTGACTTCCTCCTGG+AGG - tig0028823:36294-36313 None:intergenic 45.0%
!!! AGCTGATTTTGACTTCCTCC+TGG - tig0028823:36297-36316 None:intergenic 45.0%
CTTATGAAACGTCTGCATGG+AGG + tig0028823:36487-36506 Msa1439610:CDS 45.0%
GTAGTAGGAATCGCACACAA+AGG - tig0028823:36666-36685 None:intergenic 45.0%
!! TGCTCTGAAATGGGAAGAAG+TGG + tig0028823:36930-36949 Msa1439610:intron 45.0%
CTTGGAAGATGGTAGTACAC+AGG + tig0028823:36972-36991 Msa1439610:intron 45.0%
! ATGCTTCTGTTTGAAACCGG+AGG + tig0028823:37124-37143 Msa1439610:intron 45.0%
! TGCTTCTGTTTGAAACCGGA+GGG + tig0028823:37125-37144 Msa1439610:intron 45.0%
TCAGCTAGATGTTTGGGCAA+AGG + tig0028823:37821-37840 Msa1439610:intron 45.0%
GCAAAGGAAAGAGAAGTTGC+TGG + tig0028823:37837-37856 Msa1439610:CDS 45.0%
CTGTACTTATTGCCAAGCCT+TGG + tig0028823:38083-38102 Msa1439610:intron 45.0%
TGCCAAGCCTTGGGTAATAA+TGG + tig0028823:38093-38112 Msa1439610:intron 45.0%
! TGGTTCCTTGTTTGGATCCT+AGG + tig0028823:38113-38132 Msa1439610:intron 45.0%
CTGCAATGAAGGCTAACCAA+AGG - tig0028823:38241-38260 None:intergenic 45.0%
!! CAACACAATGAAGGTGTTGG+AGG - tig0028823:38264-38283 None:intergenic 45.0%
CTCCAACACCTTCATTGTGT+TGG + tig0028823:38262-38281 Msa1439610:intron 45.0%
! AGCCAACACAATGAAGGTGT+TGG - tig0028823:38267-38286 None:intergenic 45.0%
CCTCAAAGCCAACACAATGA+AGG - tig0028823:38273-38292 None:intergenic 45.0%
!! CCTTCATTGTGTTGGCTTTG+AGG + tig0028823:38270-38289 Msa1439610:intron 45.0%
!! TCATTGTGTTGGCTTTGAGG+GGG + tig0028823:38273-38292 Msa1439610:intron 45.0%
GAGTGCTATCTATCCGATGT+GGG - tig0028823:38309-38328 None:intergenic 45.0%
! AGAGTGCTATCTATCCGATG+TGG - tig0028823:38310-38329 None:intergenic 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG - tig0028823:38366-38385 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG + tig0028823:38363-38382 Msa1439610:intron 45.0%
!! TGCAGGATGCTGCTTCATTT+TGG + tig0028823:38592-38611 Msa1439610:intron 45.0%
TCAACAACAGCAGAACATGC+TGG - tig0028823:38666-38685 None:intergenic 45.0%
! GTGAAGAAGGAAGCATGTAG+AGG - tig0028823:38758-38777 None:intergenic 45.0%
!! GCAAGAGACTTTCTGAAGCT+CGG + tig0028823:39209-39228 Msa1439610:intron 45.0%
GCTGGCTAAGGAAATTACTG+AGG + tig0028823:39241-39260 Msa1439610:intron 45.0%
GCCTCTTGCAGAATAATCAG+AGG - tig0028823:39284-39303 None:intergenic 45.0%
TTGCATGTGAGAGAAGTGGT+TGG + tig0028823:39310-39329 Msa1439610:intron 45.0%
TGCATGTGAGAGAAGTGGTT+GGG + tig0028823:39311-39330 Msa1439610:intron 45.0%
CATGGGACAGAGCAAAACAA+GGG - tig0028823:39444-39463 None:intergenic 45.0%
TCATGGGACAGAGCAAAACA+AGG - tig0028823:39445-39464 None:intergenic 45.0%
!!! GCTATTTTGACAGCAAGAGC+TGG + tig0028823:39738-39757 Msa1439610:CDS 45.0%
TCAGACATCTATGATAGGGG+TGG - tig0028823:39885-39904 None:intergenic 45.0%
GACGTTTCAAGCAAAACTCC+AGG - tig0028823:40252-40271 None:intergenic 45.0%
! GAGTTTTGCTTGAAACGTCG+TGG + tig0028823:40253-40272 Msa1439610:CDS 45.0%
GCACAAGATCCCGTCTAATA+TGG - tig0028823:40327-40346 None:intergenic 45.0%
ATGACTGTAGGTAGGATTCG+GGG - tig0028823:40422-40441 None:intergenic 45.0%
TGCTTAGCAGAAGTTGCATC+AGG - tig0028823:40787-40806 None:intergenic 45.0%
TTCTTCTGCAGCTTGATGAG+TGG + tig0028823:40939-40958 Msa1439610:intron 45.0%
AAAATCAACAGGTGGAGGAG+AGG - tig0028823:41297-41316 None:intergenic 45.0%
!! TATATTAAAAAATTTATTGT+AGG + tig0028823:37546-37565 Msa1439610:intron 5.0%
!! ATATTAAAAAATTTATTGTA+GGG + tig0028823:37547-37566 Msa1439610:intron 5.0%
!! TCTGATACTGGATGGTGGAG+TGG - tig0028823:33058-33077 None:intergenic 50.0%
ATCTCGGCTTAGTCGCTTCT+TGG + tig0028823:33113-33132 Msa1439610:five_prime_UTR 50.0%
ACAATCTTCATCGCCGTCAC+CGG + tig0028823:33262-33281 Msa1439610:CDS 50.0%
TCGAGTATCACTTCCGGTGA+CGG - tig0028823:33278-33297 None:intergenic 50.0%
CACCGGAAGTGATACTCGAA+TGG + tig0028823:33279-33298 Msa1439610:CDS 50.0%
! CGGTGAATGCGATTTTCCTC+CGG - tig0028823:33354-33373 None:intergenic 50.0%
TCGATCCGAAAAATCTGCCG+CGG + tig0028823:33383-33402 Msa1439610:CDS 50.0%
! TGTTCCCGCGGCAGATTTTT+CGG - tig0028823:33391-33410 None:intergenic 50.0%
ATACCGGAATCATGTTCCCG+CGG - tig0028823:33403-33422 None:intergenic 50.0%
CCTCGTAACACGTGCGAAAT+CGG + tig0028823:33430-33449 Msa1439610:CDS 50.0%
ACGTGCGAAATCGGAGAAGA+CGG + tig0028823:33439-33458 Msa1439610:CDS 50.0%
CGAAATCGGAGAAGACGGTT+AGG + tig0028823:33444-33463 Msa1439610:CDS 50.0%
AGACGGTTAGGAATGTGAGG+AGG + tig0028823:33456-33475 Msa1439610:CDS 50.0%
! TGCGTTGATGGAGAGGGATT+CGG + tig0028823:33553-33572 Msa1439610:CDS 50.0%
AGAAGGAGGTTGAGAGGTTG+AGG + tig0028823:33579-33598 Msa1439610:CDS 50.0%
GGAATGTTGTGAGGAGACAG+AGG + tig0028823:33600-33619 Msa1439610:CDS 50.0%
TGTTGTGAGGAGACAGAGGA+AGG + tig0028823:33604-33623 Msa1439610:CDS 50.0%
GAGGATGCTAGAGGTTTCGA+GGG + tig0028823:33637-33656 Msa1439610:CDS 50.0%
AGAGGTTTCGAGGGAAGAAG+CGG + tig0028823:33646-33665 Msa1439610:CDS 50.0%
TGTTGTTCGAGACGGAGTGT+TGG + tig0028823:33937-33956 Msa1439610:intron 50.0%
! GTTGTTCGAGACGGAGTGTT+GGG + tig0028823:33938-33957 Msa1439610:intron 50.0%
! AGTGTTGGGCGGTAAAGAAC+CGG + tig0028823:33952-33971 Msa1439610:intron 50.0%
GGAGCCAAATCACTAGAGGT+AGG + tig0028823:34174-34193 Msa1439610:intron 50.0%
CGGCTATAGCGATGACATAG+TGG + tig0028823:34469-34488 Msa1439610:intron 50.0%
TTTCGACTACCAAAGCCAGC+AGG - tig0028823:35043-35062 None:intergenic 50.0%
TCACTTGCTTATGCCTGCAG+AGG - tig0028823:35308-35327 None:intergenic 50.0%
GCAAGGGATGCTCAAAGATC+AGG + tig0028823:35414-35433 Msa1439610:CDS 50.0%
GAGTCCTCCCCTATTACTTC+AGG + tig0028823:35746-35765 Msa1439610:CDS 50.0%
GAGCTGATGCAGAGATCTTG+AGG + tig0028823:35835-35854 Msa1439610:CDS 50.0%
GGAGCCACCTCTCAAAATGT+TGG + tig0028823:36541-36560 Msa1439610:CDS 50.0%
GTCGCAATTTAGGCGACTAG+GGG - tig0028823:38219-38238 None:intergenic 50.0%
GGTCGCAATTTAGGCGACTA+GGG - tig0028823:38220-38239 None:intergenic 50.0%
AGGTCGCAATTTAGGCGACT+AGG - tig0028823:38221-38240 None:intergenic 50.0%
GTCGCCTAAATTGCGACCTT+TGG + tig0028823:38222-38241 Msa1439610:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + tig0028823:38293-38312 Msa1439610:intron 50.0%
!! CAAAACCGGCTTGTAAGGTG+AGG - tig0028823:38361-38380 None:intergenic 50.0%
TTGCGTATACTGTTCCTGCC+AGG + tig0028823:38455-38474 Msa1439610:intron 50.0%
GAATACCATTAAGGCCTGGC+AGG - tig0028823:38472-38491 None:intergenic 50.0%
GAGTCACTTGCACGACTTGA+GGG - tig0028823:38499-38518 None:intergenic 50.0%
! TCAGCAACCATCGACTGCAA+GGG + tig0028823:38617-38636 Msa1439610:CDS 50.0%
GCATATTCCCTTGCAGTCGA+TGG - tig0028823:38627-38646 None:intergenic 50.0%
CATGCTTCCTTCTTCACCAC+AGG + tig0028823:38761-38780 Msa1439610:CDS 50.0%
AAGGAAAATACAACGGGGGG+TGG + tig0028823:39040-39059 Msa1439610:intron 50.0%
AAGTGGTTGGGTGAGAGAGT+TGG + tig0028823:39323-39342 Msa1439610:intron 50.0%
AGTGGTTGGGTGAGAGAGTT+GGG + tig0028823:39324-39343 Msa1439610:intron 50.0%
TTCCTGTCCAGATGATCCAC+TGG - tig0028823:39691-39710 None:intergenic 50.0%
GCTGAGACCCGACATATTGA+TGG - tig0028823:39786-39805 None:intergenic 50.0%
! TCTGATATGGAGGCATGTCC+AGG + tig0028823:39900-39919 Msa1439610:intron 50.0%
! ATATGGAGGCATGTCCAGGA+TGG + tig0028823:39904-39923 Msa1439610:intron 50.0%
! ATTGGGGGTATGCATATGCG+TGG + tig0028823:40138-40157 Msa1439610:intron 50.0%
! TTGGGGGTATGCATATGCGT+GGG + tig0028823:40139-40158 Msa1439610:intron 50.0%
TTCTTAATGCGCAGGCTTGG+AGG + tig0028823:40192-40211 Msa1439610:intron 50.0%
TCTTAATGCGCAGGCTTGGA+GGG + tig0028823:40193-40212 Msa1439610:intron 50.0%
AAACTCCAGGGACTCCAGTA+CGG - tig0028823:40239-40258 None:intergenic 50.0%
AGACGGGATCTTGTGCAAAG+TGG + tig0028823:40331-40350 Msa1439610:CDS 50.0%
TGACTGTAGGTAGGATTCGG+GGG - tig0028823:40421-40440 None:intergenic 50.0%
TGGTTGCCTGAACTCAAGAC+TGG + tig0028823:40641-40660 Msa1439610:CDS 50.0%
TTCTGCAGCTTGATGAGTGG+TGG + tig0028823:40942-40961 Msa1439610:intron 50.0%
TCTGCAGCTTGATGAGTGGT+GGG + tig0028823:40943-40962 Msa1439610:intron 50.0%
GGCTTAGTCGCTTCTTGGAC+CGG + tig0028823:33118-33137 Msa1439610:five_prime_UTR 55.0%
TCGCTTCTTGGACCGGATAC+CGG + tig0028823:33125-33144 Msa1439610:five_prime_UTR 55.0%
CGATCCGAAAAATCTGCCGC+GGG + tig0028823:33384-33403 Msa1439610:CDS 55.0%
GCGGGAACATGATTCCGGTA+TGG + tig0028823:33402-33421 Msa1439610:CDS 55.0%
CCGATTTCGCACGTGTTACG+AGG - tig0028823:33433-33452 None:intergenic 55.0%
GAAGGAGAAGAGAGAAGGGG+AGG + tig0028823:33520-33539 Msa1439610:CDS 55.0%
GAAGAGAGAAGGGGAGGAAG+TGG + tig0028823:33526-33545 Msa1439610:CDS 55.0%
GGAAGTGGAGGTTGCGTTGA+TGG + tig0028823:33541-33560 Msa1439610:CDS 55.0%
! TGGAGGTTGCGTTGATGGAG+AGG + tig0028823:33546-33565 Msa1439610:CDS 55.0%
! GGAGGTTGCGTTGATGGAGA+GGG + tig0028823:33547-33566 Msa1439610:CDS 55.0%
!! GGAGAGGGATTCGGTGAAGA+AGG + tig0028823:33562-33581 Msa1439610:CDS 55.0%
!! GAGGGATTCGGTGAAGAAGG+AGG + tig0028823:33565-33584 Msa1439610:CDS 55.0%
CGGTGAAGAAGGAGGTTGAG+AGG + tig0028823:33573-33592 Msa1439610:CDS 55.0%
CGAGGATGCTAGAGGTTTCG+AGG + tig0028823:33636-33655 Msa1439610:CDS 55.0%
TTTCGAGGGAAGAAGCGGAG+AGG + tig0028823:33651-33670 Msa1439610:CDS 55.0%
TCGGACAGTGGTAAGACTGG+CGG + tig0028823:33914-33933 Msa1439610:intron 55.0%
!! ACTGGCGGTGTTGTTCGAGA+CGG + tig0028823:33929-33948 Msa1439610:intron 55.0%
CAGAGATGAGGATGCTGCGT+TGG + tig0028823:33997-34016 Msa1439610:intron 55.0%
GAGGGGAGCCAAATCACTAG+AGG + tig0028823:34170-34189 Msa1439610:intron 55.0%
GAATCGTCCAATGCCATCCC+TGG + tig0028823:34637-34656 Msa1439610:intron 55.0%
CCGAGATGTGTCAGTGTCAC+CGG - tig0028823:34931-34950 None:intergenic 55.0%
CCGGTGACACTGACACATCT+CGG + tig0028823:34928-34947 Msa1439610:intron 55.0%
! AGTGGGTTCGTTACCTCTGC+AGG + tig0028823:35292-35311 Msa1439610:intron 55.0%
GGATGCTCAAAGATCAGGCG+TGG + tig0028823:35419-35438 Msa1439610:CDS 55.0%
ACGCCACTTCCTTCGTAAGC+AGG - tig0028823:35630-35649 None:intergenic 55.0%
AGCTTCGCTGCTTCTGCTTG+AGG - tig0028823:35663-35682 None:intergenic 55.0%
TCAAGCAGAAGCAGCGAAGC+TGG + tig0028823:35662-35681 Msa1439610:CDS 55.0%
CAAGCAGAAGCAGCGAAGCT+GGG + tig0028823:35663-35682 Msa1439610:CDS 55.0%
AAGCAGAAGCAGCGAAGCTG+GGG + tig0028823:35664-35683 Msa1439610:CDS 55.0%
! TGATGGGCAGATTCCGGATG+AGG + tig0028823:35695-35714 Msa1439610:CDS 55.0%
AGGAGAGCTCCCATCAGAAG+AGG - tig0028823:36226-36245 None:intergenic 55.0%
CTAGGGGTGGACCGCAATTA+AGG - tig0028823:38203-38222 None:intergenic 55.0%
GCAATTTAGGCGACTAGGGG+TGG - tig0028823:38216-38235 None:intergenic 55.0%
! GGTGTTGGAGGCTGCAATGA+AGG - tig0028823:38252-38271 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + tig0028823:38276-38295 Msa1439610:intron 55.0%
GCACTCCTCACCTTACAAGC+CGG + tig0028823:38353-38372 Msa1439610:intron 55.0%
CTGTTCCTGCCAGGCCTTAA+TGG + tig0028823:38464-38483 Msa1439610:intron 55.0%
GGAGTCACTTGCACGACTTG+AGG - tig0028823:38500-38519 None:intergenic 55.0%
! GTCAGCAACCATCGACTGCA+AGG + tig0028823:38616-38635 Msa1439610:CDS 55.0%
! GAAGCTCGGTGAGTTTGAGC+TGG + tig0028823:39223-39242 Msa1439610:intron 55.0%
CGGTGAGTTTGAGCTGGCTA+AGG + tig0028823:39229-39248 Msa1439610:intron 55.0%
GTGAGAGAGTTGGGAGTGAG+AGG + tig0028823:39333-39352 Msa1439610:intron 55.0%
! TCTGGTTCAGGCACTGCTTG+AGG + tig0028823:39656-39675 Msa1439610:intron 55.0%
AGATGATCCACTGGACCCGA+TGG - tig0028823:39682-39701 None:intergenic 55.0%
ATCGGGTCCAGTGGATCATC+TGG + tig0028823:39681-39700 Msa1439610:CDS 55.0%
GTCCAGTGGATCATCTGGAC+AGG + tig0028823:39686-39705 Msa1439610:CDS 55.0%
TGACAGCAAGAGCTGGTGCT+CGG + tig0028823:39745-39764 Msa1439610:CDS 55.0%
GCTGCACTTCAGTATGCTGC+TGG + tig0028823:39804-39823 Msa1439610:CDS 55.0%
GCACTTCAGTATGCTGCTGG+TGG + tig0028823:39807-39826 Msa1439610:CDS 55.0%
!! ATAGGGGTGGACTGTGCACT+AGG - tig0028823:39872-39891 None:intergenic 55.0%
! TGCTGGTCTAGCATCCGTAC+TGG + tig0028823:40222-40241 Msa1439610:CDS 55.0%
! TGATGAGTGGTGGGAGCAAC+CGG + tig0028823:40952-40971 Msa1439610:CDS 55.0%
TCGACTGGGTGACAGTGGAT+GGG + tig0028823:40987-41006 Msa1439610:CDS 55.0%
! ATGCGATTTTCCTCCGGCGC+TGG - tig0028823:33348-33367 None:intergenic 60.0%
CTGCCGCGGGAACATGATTC+CGG + tig0028823:33397-33416 Msa1439610:CDS 60.0%
ACGGTTCACGGTGAAGGGGA+TGG + tig0028823:33485-33504 Msa1439610:CDS 60.0%
GTTCACGGTGAAGGGGATGG+TGG + tig0028823:33488-33507 Msa1439610:CDS 60.0%
! ACGGTGAAGGGGATGGTGGT+GGG + tig0028823:33492-33511 Msa1439610:CDS 60.0%
!! GGATGGTGGTGGGAGGAAGA+AGG + tig0028823:33502-33521 Msa1439610:CDS 60.0%
GAGAGAAGGGGAGGAAGTGG+AGG + tig0028823:33529-33548 Msa1439610:CDS 60.0%
GGGAAGAAGCGGAGAGGAAG+AGG + tig0028823:33657-33676 Msa1439610:CDS 60.0%
!! GTTCGAGACGGAGTGTTGGG+CGG + tig0028823:33941-33960 Msa1439610:intron 60.0%
GGGGTGGACCGCAATTAAGG+CGG - tig0028823:38200-38219 None:intergenic 60.0%
! CAGGCACTGCTTGAGGCCAT+CGG + tig0028823:39663-39682 Msa1439610:intron 60.0%
! AGGCACTGCTTGAGGCCATC+GGG + tig0028823:39664-39683 Msa1439610:intron 60.0%
GACAGCAAGAGCTGGTGCTC+GGG + tig0028823:39746-39765 Msa1439610:CDS 60.0%
GGCTTGGAGGGTTCAGATGC+TGG + tig0028823:40205-40224 Msa1439610:intron 60.0%
AGCATCCGTACTGGAGTCCC+TGG + tig0028823:40231-40250 Msa1439610:CDS 60.0%
CAGTCGACAACCGTCGATGC+CGG - tig0028823:40974-40993 None:intergenic 60.0%
!! GGCATCGACGGTTGTCGACT+GGG + tig0028823:40973-40992 Msa1439610:CDS 60.0%
! GGTTGTCGACTGGGTGACAG+TGG + tig0028823:40982-41001 Msa1439610:CDS 60.0%
GTCGACTGGGTGACAGTGGA+TGG + tig0028823:40986-41005 Msa1439610:CDS 60.0%
GGCTGCTTCACAGCAACTCG+AGG - tig0028823:41188-41207 None:intergenic 60.0%
!! CGATTTTCCTCCGGCGCTGG+CGG - tig0028823:33345-33364 None:intergenic 65.0%
! CACGGTGAAGGGGATGGTGG+TGG + tig0028823:33491-33510 Msa1439610:CDS 65.0%
!! GTGAAGGGGATGGTGGTGGG+AGG + tig0028823:33495-33514 Msa1439610:CDS 65.0%
CTTGGGGCTGATGTGCCTCC+AGG + tig0028823:36276-36295 Msa1439610:CDS 65.0%
CTTGAGGCCATCGGGTCCAG+TGG + tig0028823:39672-39691 Msa1439610:CDS 65.0%
AGCTGGTGCTCGGGATCCGT+CGG + tig0028823:39755-39774 Msa1439610:CDS 65.0%
! GTGGGAGCAACCGGCATCGA+CGG + tig0028823:40961-40980 Msa1439610:CDS 65.0%
!! CGGCATCGACGGTTGTCGAC+TGG + tig0028823:40972-40991 Msa1439610:CDS 65.0%
! CTGGCGGCGTATTGGCCGAG+TGG - tig0028823:33329-33348 None:intergenic 70.0%
GGGGCTGATGTGCCTCCAGG+AGG + tig0028823:36279-36298 Msa1439610:CDS 70.0%
GGCCAATACGCCGCCAGCGC+CGG + tig0028823:33332-33351 Msa1439610:CDS 75.0%
!! CTCCGGCGCTGGCGGCGTAT+TGG - tig0028823:33337-33356 None:intergenic 75.0%
! CAATACGCCGCCAGCGCCGG+AGG + tig0028823:33335-33354 Msa1439610:CDS 75.0%
Chromosome Type Strat End Strand Name
tig0028823 gene 32927 41370 32927 ID=Msa1439610;Name=Msa1439610
tig0028823 mRNA 32927 41370 32927 ID=Msa1439610-mRNA-1;Parent=Msa1439610;Name=Msa1439610-mRNA-1;_AED=0.10;_eAED=0.10;_QI=330|0.9|0.81|1|1|1|11|0|841
tig0028823 exon 32927 33705 32927 ID=Msa1439610-mRNA-1:exon:11858;Parent=Msa1439610-mRNA-1
tig0028823 exon 35314 35856 35314 ID=Msa1439610-mRNA-1:exon:11859;Parent=Msa1439610-mRNA-1
tig0028823 exon 36188 36329 36188 ID=Msa1439610-mRNA-1:exon:11860;Parent=Msa1439610-mRNA-1
tig0028823 exon 36409 36582 36409 ID=Msa1439610-mRNA-1:exon:11861;Parent=Msa1439610-mRNA-1
tig0028823 exon 37825 38034 37825 ID=Msa1439610-mRNA-1:exon:11862;Parent=Msa1439610-mRNA-1
tig0028823 exon 38597 38782 38597 ID=Msa1439610-mRNA-1:exon:11863;Parent=Msa1439610-mRNA-1
tig0028823 exon 39666 39828 39666 ID=Msa1439610-mRNA-1:exon:11864;Parent=Msa1439610-mRNA-1
tig0028823 exon 40206 40401 40206 ID=Msa1439610-mRNA-1:exon:11865;Parent=Msa1439610-mRNA-1
tig0028823 exon 40583 40715 40583 ID=Msa1439610-mRNA-1:exon:11866;Parent=Msa1439610-mRNA-1
tig0028823 exon 40950 41077 40950 ID=Msa1439610-mRNA-1:exon:11867;Parent=Msa1439610-mRNA-1
tig0028823 exon 41169 41370 41169 ID=Msa1439610-mRNA-1:exon:11868;Parent=Msa1439610-mRNA-1
tig0028823 five_prime_UTR 32927 33256 32927 ID=Msa1439610-mRNA-1:five_prime_utr;Parent=Msa1439610-mRNA-1
tig0028823 CDS 33257 33705 33257 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 35314 35856 35314 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 36188 36329 36188 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 36409 36582 36409 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 37825 38034 37825 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 38597 38782 38597 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 39666 39828 39666 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 40206 40401 40206 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 40583 40715 40583 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 40950 41077 40950 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
tig0028823 CDS 41169 41370 41169 ID=Msa1439610-mRNA-1:cds;Parent=Msa1439610-mRNA-1
Gene Sequence

>Msa1439610

ATGCAACAATCTTCATCGCCGTCACCGGAAGTGATACTCGAATGGCTTCACAAAGAAATGGGATACAGACCACTCGGCCAATACGCCGCCAGCGCCGGAGGAAAATCGCATTCACCGTCAGTCGAATCGATCCGAAAAATCTGCCGCGGGAACATGATTCCGGTATGGAATTTCCTCGTAACACGTGCGAAATCGGAGAAGACGGTTAGGAATGTGAGGAGGAATATTACGGTTCACGGTGAAGGGGATGGTGGTGGGAGGAAGAAGGAGAAGAGAGAAGGGGAGGAAGTGGAGGTTGCGTTGATGGAGAGGGATTCGGTGAAGAAGGAGGTTGAGAGGTTGAGGAATGTTGTGAGGAGACAGAGGAAGGATTTGAAAGCGAGGATGCTAGAGGTTTCGAGGGAAGAAGCGGAGAGGAAGAGGATGCTTGATGAACGGGCGAATTACAGGCATAAGCAAGTGATGTTGGAGGCCTATGACCGCCAATGTGATGAAGCTTCGAGAATATTTGCTGAATACCATAAACGTCTCTGTTACTATATAAATCAAGCAAGGGATGCTCAAAGATCAGGCGTGGATTCTTCCGTTGAAATGGTAAATAGTTTTAGTGCAAAAAATGAGAAGGAAGCTGTTTATTCTACTGTTAAGGGCAGTAAATCTTCAGATGATGTCATTGTCATTGAAACCACGAGGGAAAAGAATATTAGAAAGGCGTGTGAATCTCTTGTAGCTTACATGGTTGAGAAAATACAAAGTTCTTTTCCTGCTTACGAAGGAAGTGGCGTTCTAGCAAATCCTCAAGCAGAAGCAGCGAAGCTGGGGTTTGATTTTGATGGGCAGATTCCGGATGAGGTTAGAACAGTTATTGTGAATTGCCTAAAGAGTCCTCCCCTATTACTTCAGGCAATTACTGCATACACTTCTCACTTGAAAAGTCTAATATCCAGAGAAATAGAGAAAATTGATGTTAGAGCTGATGCAGAGATCTTGAGGTACAAATATGAAAATAACATAGTTATGGATGTTTCCTCTTCTGATGGGAGCTCTCCTCTACAGTATCCACTTTATGGAAATGGAAAACTTGGGGCTGATGTGCCTCCAGGAGGAAGTCAAAATCAGCTCCTTGAAAGACAGAAAGCTCATGTTCAGCAGTTTTTGGCTACTGAAGATGCACTAAACAATGCTGCAGAAGCAAGGGACTTGTGTGAAAAACTTATGAAACGTCTGCATGGAGGCACCGATGTTACTTCTCGTTCAATTGGGATTGGAGCCACCTCTCAAAATGTTGGAAGTCTTAGACAACTTCAGCTAGATGTTTGGGCAAAGGAAAGAGAAGTTGCTGGTTTAAAGGCAAGTTTAAACACCTTGATGTCTGAAATACAACGCTTGAATAAGTTATGTGCCGAGAGGAAAGAAGCCGAAGATTCTCTGAAAAAAAAGTGGAAAAAGATTGAAGAGTTTGATGGTCGTAGATCAGAGCTTGAGTCCATATACACCGCACTTCTTAAAGCAAATACGGATGCTGCTTCATTTTGGAGTCAGCAACCATCGACTGCAAGGGAATATGCTTTAAGCACTATAATTCCAGCATGTTCTGCTGTTGTTGAGACTTCAAATAGTGCAAAGGATCTTATTGAGAAAGAAGTGTCTGCTTTTTATCGGAGTCCAGATAATAGCCTCTACATGCTTCCTTCTTCACCACAGGCACTGCTTGAGGCCATCGGGTCCAGTGGATCATCTGGACAGGAAGCAGTTGCAAATGCAGAAATAAGTGCGGCTATTTTGACAGCAAGAGCTGGTGCTCGGGATCCGTCGGCAATTCCATCAATATGTCGGGTCTCAGCTGCACTTCAGTATGCTGCTGGTGGCTTGGAGGGTTCAGATGCTGGTCTAGCATCCGTACTGGAGTCCCTGGAGTTTTGCTTGAAACGTCGTGGTTCAGAAGCTAGTGTTTTGGAAGATTTATTAAAGGCTATTAATCTTGTCCATATTAGACGGGATCTTGTGCAAAGTGGTCATGCCTTGTTGAATCATGCCTACTTTGTTCAACAGGACTATGAAAGGACGACCAATTTTTCTTTAAATTTGGCAGCAGAACAAGAAAGAGCTGTCACGGAAAAATGGTTGCCTGAACTCAAGACTGGTGTTTTGAATGCTCAGCAGAGTTTGGAAGCTTGCAAATATGTTTGGGGATTGCTTGATGAGTGGTGGGAGCAACCGGCATCGACGGTTGTCGACTGGGTGACAGTGGATGGGCAAAATGTAGCTGCCTATTATAATCATGTGAAAAAGCTTCTAACATGTTATGATCAGGAGCTACTATTACTTTATATTCTTCAGCCTCGAGTTGCTGTGAAGCAGCCAGTACTTCAAGCATTTACTTTGGGATGGAATGTGCAGCTGTTGTTGTTGTTGATAGACCAAGAAAACCCCAAGAACAAGAAAGAAACCTCTCCTCCACCTGTTGATTTTTTTAGATTCCCCCTTCTTTCTCTTCAGAAGTGTGATGTGTATTATAACTTATAA
Protein sequence

>Msa1439610

MQQSSSPSPEVILEWLHKEMGYRPLGQYAASAGGKSHSPSVESIRKICRGNMIPVWNFLVTRAKSEKTVRNVRRNITVHGEGDGGGRKKEKREGEEVEVALMERDSVKKEVERLRNVVRRQRKDLKARMLEVSREEAERKRMLDERANYRHKQVMLEAYDRQCDEASRIFAEYHKRLCYYINQARDAQRSGVDSSVEMVNSFSAKNEKEAVYSTVKGSKSSDDVIVIETTREKNIRKACESLVAYMVEKIQSSFPAYEGSGVLANPQAEAAKLGFDFDGQIPDEVRTVIVNCLKSPPLLLQAITAYTSHLKSLISREIEKIDVRADAEILRYKYENNIVMDVSSSDGSSPLQYPLYGNGKLGADVPPGGSQNQLLERQKAHVQQFLATEDALNNAAEARDLCEKLMKRLHGGTDVTSRSIGIGATSQNVGSLRQLQLDVWAKEREVAGLKASLNTLMSEIQRLNKLCAERKEAEDSLKKKWKKIEEFDGRRSELESIYTALLKANTDAASFWSQQPSTAREYALSTIIPACSAVVETSNSAKDLIEKEVSAFYRSPDNSLYMLPSSPQALLEAIGSSGSSGQEAVANAEISAAILTARAGARDPSAIPSICRVSAALQYAAGGLEGSDAGLASVLESLEFCLKRRGSEASVLEDLLKAINLVHIRRDLVQSGHALLNHAYFVQQDYERTTNFSLNLAAEQERAVTEKWLPELKTGVLNAQQSLEACKYVWGLLDEWWEQPASTVVDWVTVDGQNVAAYYNHVKKLLTCYDQELLLLYILQPRVAVKQPVLQAFTLGWNVQLLLLLIDQENPKNKKETSPPPVDFFRFPLLSLQKCDVYYNL*