Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248310 | PNX83264.1 | 60.814 | 393 | 105 | 4 | 108 | 451 | 90 | 482 | 1.40e-166 | 491 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248310 | sp|Q9SZL8|FRS5_ARATH | 29.301 | 372 | 205 | 8 | 131 | 448 | 77 | 444 | 1.41e-34 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1248310 | TF | FAR1 |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064970 | Msa1248310 | 0.805928 | 1.053246e-49 | -8.615850e-47 |
| Msa0099210 | Msa1248310 | 0.811518 | 6.724846e-51 | -8.615850e-47 |
| Msa0604350 | Msa1248310 | 0.809228 | 2.098659e-50 | -8.615850e-47 |
| Msa0639610 | Msa1248310 | 0.827276 | 1.710953e-54 | -8.615850e-47 |
| Msa0645300 | Msa1248310 | 0.814248 | 1.697331e-51 | -8.615850e-47 |
| Msa0650630 | Msa1248310 | 0.813629 | 2.323989e-51 | -8.615850e-47 |
| Msa0694370 | Msa1248310 | 0.816947 | 4.252487e-52 | -8.615850e-47 |
| Msa0701010 | Msa1248310 | 0.811193 | 7.913416e-51 | -8.615850e-47 |
| Msa0703120 | Msa1248310 | 0.808195 | 3.488705e-50 | -8.615850e-47 |
| Msa0725850 | Msa1248310 | 0.803697 | 3.080607e-49 | -8.615850e-47 |
| Msa0726140 | Msa1248310 | 0.804437 | 2.160994e-49 | -8.615850e-47 |
| Msa0729800 | Msa1248310 | 0.863555 | 2.289289e-64 | -8.615850e-47 |
| Msa0733290 | Msa1248310 | 0.831227 | 1.881161e-55 | -8.615850e-47 |
| Msa0743810 | Msa1248310 | 0.837496 | 5.023627e-57 | -8.615850e-47 |
| Msa0745060 | Msa1248310 | 0.808647 | 2.794365e-50 | -8.615850e-47 |
| Msa0748970 | Msa1248310 | 0.874119 | 8.665529e-68 | -8.615850e-47 |
| Msa0768290 | Msa1248310 | 0.853872 | 1.793290e-61 | -8.615850e-47 |
| Msa0768370 | Msa1248310 | 0.871893 | 4.830079e-67 | -8.615850e-47 |
| Msa0783160 | Msa1248310 | 0.843050 | 1.778285e-58 | -8.615850e-47 |
| Msa0784290 | Msa1248310 | 0.824988 | 5.988582e-54 | -8.615850e-47 |
| Msa0784300 | Msa1248310 | 0.815556 | 8.700404e-52 | -8.615850e-47 |
| Msa0787120 | Msa1248310 | 0.822260 | 2.604680e-53 | -8.615850e-47 |
| Msa0787600 | Msa1248310 | 0.803071 | 4.151497e-49 | -8.615850e-47 |
| Msa0800210 | Msa1248310 | 0.806595 | 7.620836e-50 | -8.615850e-47 |
| Msa0808010 | Msa1248310 | 0.860471 | 2.019055e-63 | -8.615850e-47 |
| Msa0808020 | Msa1248310 | 0.854956 | 8.709412e-62 | -8.615850e-47 |
| Msa0811270 | Msa1248310 | 0.801594 | 8.362887e-49 | -8.615850e-47 |
| Msa0824390 | Msa1248310 | 0.807065 | 6.062964e-50 | -8.615850e-47 |
| Msa0824590 | Msa1248310 | 0.816981 | 4.178347e-52 | -8.615850e-47 |
| Msa0824600 | Msa1248310 | 0.831133 | 1.983500e-55 | -8.615850e-47 |
| Msa0825860 | Msa1248310 | 0.817179 | 3.770917e-52 | -8.615850e-47 |
| Msa0131770 | Msa1248310 | 0.815645 | 8.312430e-52 | -8.615850e-47 |
| Msa0135660 | Msa1248310 | 0.801443 | 8.983255e-49 | -8.615850e-47 |
| Msa0142220 | Msa1248310 | 0.813696 | 2.245587e-51 | -8.615850e-47 |
| Msa0182740 | Msa1248310 | 0.807882 | 4.067390e-50 | -8.615850e-47 |
| Msa0198910 | Msa1248310 | 0.822855 | 1.894810e-53 | -8.615850e-47 |
| Msa0200000 | Msa1248310 | 0.822357 | 2.474224e-53 | -8.615850e-47 |
| Msa0227480 | Msa1248310 | 0.820125 | 8.093116e-53 | -8.615850e-47 |
| Msa1248300 | Msa1248310 | 0.931724 | 2.473000e-94 | -8.615850e-47 |
| Msa1248310 | Msa1248370 | 0.957253 | 4.241906e-115 | -8.615850e-47 |
| Msa1248310 | Msa1268880 | 0.806105 | 9.668947e-50 | -8.615850e-47 |
| Msa1248310 | Msa1269670 | 0.802866 | 4.577003e-49 | -8.615850e-47 |
| Msa1248310 | Msa1270230 | 0.828509 | 8.639948e-55 | -8.615850e-47 |
| Msa1248310 | Msa1270240 | 0.803799 | 2.934398e-49 | -8.615850e-47 |
| Msa1248310 | Msa1283330 | 0.824081 | 9.793713e-54 | -8.615850e-47 |
| Msa1248310 | Msa1284680 | 0.809763 | 1.611158e-50 | -8.615850e-47 |
| Msa1248310 | Msa1285540 | 0.812661 | 3.789186e-51 | -8.615850e-47 |
| Msa1248310 | Msa1285930 | 0.839209 | 1.816850e-57 | -8.615850e-47 |
| Msa1248310 | Msa1287800 | 0.830693 | 2.543378e-55 | -8.615850e-47 |
| Msa1248310 | Msa1287810 | 0.843559 | 1.300651e-58 | -8.615850e-47 |
| Msa1248310 | Msa1288560 | 0.804124 | 2.511204e-49 | -8.615850e-47 |
| Msa1248310 | Msa1289420 | 0.899777 | 1.416424e-77 | -8.615850e-47 |
| Msa1248310 | Msa1289430 | 0.891587 | 3.467966e-74 | -8.615850e-47 |
| Msa1248310 | Msa1307890 | 0.820499 | 6.642435e-53 | -8.615850e-47 |
| Msa1248310 | Msa1320300 | 0.839859 | 1.231666e-57 | -8.615850e-47 |
| Msa1248310 | Msa1340590 | 0.833917 | 4.049144e-56 | -8.615850e-47 |
| Msa1248310 | Msa1344520 | 0.842593 | 2.352182e-58 | -8.615850e-47 |
| Msa1248310 | Msa1366810 | 0.828622 | 8.116142e-55 | -8.615850e-47 |
| Msa1248310 | Msa1387340 | 0.800681 | 1.285866e-48 | -8.615850e-47 |
| Msa1248310 | Msa1397580 | 0.831693 | 1.444279e-55 | -8.615850e-47 |
| Msa1248310 | Msa1400720 | 0.823846 | 1.111454e-53 | -8.615850e-47 |
| Msa1248310 | Msa1402790 | 0.809702 | 1.660158e-50 | -8.615850e-47 |
| Msa1248310 | Msa1404000 | 0.816415 | 5.595779e-52 | -8.615850e-47 |
| Msa1248310 | Msa1415310 | 0.807561 | 4.759838e-50 | -8.615850e-47 |
| Msa1248310 | Msa1422180 | 0.849130 | 3.940185e-60 | -8.615850e-47 |
| Msa1248310 | Msa1458750 | 0.803568 | 3.275783e-49 | -8.615850e-47 |
| Msa0365500 | Msa1248310 | 0.803159 | 3.981875e-49 | -8.615850e-47 |
| Msa0370450 | Msa1248310 | 0.823698 | 1.204355e-53 | -8.615850e-47 |
| Msa0384890 | Msa1248310 | 0.807353 | 5.268545e-50 | -8.615850e-47 |
| Msa0390070 | Msa1248310 | 0.802034 | 6.793116e-49 | -8.615850e-47 |
| Msa0394970 | Msa1248310 | 0.800225 | 1.592833e-48 | -8.615850e-47 |
| Msa0411390 | Msa1248310 | 0.809192 | 2.136931e-50 | -8.615850e-47 |
| Msa0414410 | Msa1248310 | 0.816314 | 5.895160e-52 | -8.615850e-47 |
| Msa0414420 | Msa1248310 | 0.832834 | 7.537137e-56 | -8.615850e-47 |
| Msa0417940 | Msa1248310 | 0.837537 | 4.902639e-57 | -8.615850e-47 |
| Msa0428000 | Msa1248310 | 0.814573 | 1.438154e-51 | -8.615850e-47 |
| Msa0434000 | Msa1248310 | 0.806871 | 6.664492e-50 | -8.615850e-47 |
| Msa0434200 | Msa1248310 | 0.800490 | 1.406341e-48 | -8.615850e-47 |
| Msa0450000 | Msa1248310 | 0.846568 | 2.001253e-59 | -8.615850e-47 |
| Msa0452900 | Msa1248310 | 0.844067 | 9.512272e-59 | -8.615850e-47 |
| Msa0454370 | Msa1248310 | 0.815640 | 8.337206e-52 | -8.615850e-47 |
| Msa0479340 | Msa1248310 | 0.833014 | 6.802023e-56 | -8.615850e-47 |
| Msa0980200 | Msa1248310 | 0.806329 | 8.673796e-50 | -8.615850e-47 |
| Msa0980450 | Msa1248310 | 0.805473 | 1.312323e-49 | -8.615850e-47 |
| Msa0989060 | Msa1248310 | 0.816981 | 4.178567e-52 | -8.615850e-47 |
| Msa0989620 | Msa1248310 | 0.810590 | 1.068660e-50 | -8.615850e-47 |
| Msa0997500 | Msa1248310 | 0.846833 | 1.694701e-59 | -8.615850e-47 |
| Msa1002810 | Msa1248310 | 0.802218 | 6.225980e-49 | -8.615850e-47 |
| Msa1016280 | Msa1248310 | 0.828759 | 7.520363e-55 | -8.615850e-47 |
| Msa1018520 | Msa1248310 | 0.829669 | 4.523368e-55 | -8.615850e-47 |
| Msa1023050 | Msa1248310 | 0.810777 | 9.737218e-51 | -8.615850e-47 |
| Msa1025360 | Msa1248310 | 0.851943 | 6.385707e-61 | -8.615850e-47 |
| Msa1025370 | Msa1248310 | 0.853324 | 2.575825e-61 | -8.615850e-47 |
| Msa1044830 | Msa1248310 | 0.854083 | 1.558456e-61 | -8.615850e-47 |
| Msa1044840 | Msa1248310 | 0.850517 | 1.613850e-60 | -8.615850e-47 |
| Msa1060840 | Msa1248310 | 0.832002 | 1.211962e-55 | -8.615850e-47 |
| Msa1068420 | Msa1248310 | 0.858401 | 8.447256e-63 | -8.615850e-47 |
| Msa1069220 | Msa1248310 | 0.801879 | 7.309404e-49 | -8.615850e-47 |
| Msa1092990 | Msa1248310 | 0.803044 | 4.205218e-49 | -8.615850e-47 |
| Msa1100980 | Msa1248310 | 0.811699 | 6.143929e-51 | -8.615850e-47 |
| Msa0251320 | Msa1248310 | 0.808744 | 2.664237e-50 | -8.615850e-47 |
| Msa0251640 | Msa1248310 | 0.829107 | 6.194794e-55 | -8.615850e-47 |
| Msa0267000 | Msa1248310 | 0.845225 | 4.637040e-59 | -8.615850e-47 |
| Msa0267010 | Msa1248310 | 0.844999 | 5.336575e-59 | -8.615850e-47 |
| Msa0290870 | Msa1248310 | 0.827304 | 1.684771e-54 | -8.615850e-47 |
| Msa0307540 | Msa1248310 | 0.829461 | 5.082640e-55 | -8.615850e-47 |
| Msa0311750 | Msa1248310 | 0.814847 | 1.250668e-51 | -8.615850e-47 |
| Msa0322360 | Msa1248310 | 0.831886 | 1.294470e-55 | -8.615850e-47 |
| Msa0342240 | Msa1248310 | 0.819388 | 1.192534e-52 | -8.615850e-47 |
| Msa0342750 | Msa1248310 | 0.875321 | 3.378769e-68 | -8.615850e-47 |
| Msa0342810 | Msa1248310 | 0.824229 | 9.037160e-54 | -8.615850e-47 |
| Msa0360510 | Msa1248310 | 0.818997 | 1.463643e-52 | -8.615850e-47 |
| Msa1110090 | Msa1248310 | 0.801792 | 7.616457e-49 | -8.615850e-47 |
| Msa1112300 | Msa1248310 | 0.822252 | 2.616686e-53 | -8.615850e-47 |
| Msa1120740 | Msa1248310 | 0.829190 | 5.911637e-55 | -8.615850e-47 |
| Msa1121200 | Msa1248310 | 0.819470 | 1.141985e-52 | -8.615850e-47 |
| Msa1121480 | Msa1248310 | 0.875030 | 4.248705e-68 | -8.615850e-47 |
| Msa1121490 | Msa1248310 | 0.853285 | 2.643737e-61 | -8.615850e-47 |
| Msa1135220 | Msa1248310 | 0.812400 | 4.321406e-51 | -8.615850e-47 |
| Msa1137570 | Msa1248310 | 0.809495 | 1.839321e-50 | -8.615850e-47 |
| Msa1139680 | Msa1248310 | 0.804752 | 1.857627e-49 | -8.615850e-47 |
| Msa1144450 | Msa1248310 | 0.832064 | 1.169940e-55 | -8.615850e-47 |
| Msa1146100 | Msa1248310 | 0.805213 | 1.488213e-49 | -8.615850e-47 |
| Msa1150370 | Msa1248310 | 0.816961 | 4.220828e-52 | -8.615850e-47 |
| Msa1173920 | Msa1248310 | 0.804723 | 1.884034e-49 | -8.615850e-47 |
| Msa1185110 | Msa1248310 | 0.808011 | 3.819776e-50 | -8.615850e-47 |
| Msa1192640 | Msa1248310 | 0.818823 | 1.603346e-52 | -8.615850e-47 |
| Msa1205020 | Msa1248310 | 0.808536 | 2.951797e-50 | -8.615850e-47 |
| Msa0490140 | Msa1248310 | 0.803312 | 3.701092e-49 | -8.615850e-47 |
| Msa0491590 | Msa1248310 | 0.833363 | 5.567212e-56 | -8.615850e-47 |
| Msa0493000 | Msa1248310 | 0.816655 | 4.944916e-52 | -8.615850e-47 |
| Msa0502340 | Msa1248310 | 0.802409 | 5.686631e-49 | -8.615850e-47 |
| Msa0523940 | Msa1248310 | 0.807865 | 4.101338e-50 | -8.615850e-47 |
| Msa0556430 | Msa1248310 | 0.823000 | 1.752894e-53 | -8.615850e-47 |
| Msa0564890 | Msa1248310 | 0.817504 | 3.186517e-52 | -8.615850e-47 |
| Msa0596150 | Msa1248310 | 0.804798 | 1.816698e-49 | -8.615850e-47 |
| Msa0598780 | Msa1248310 | 0.801774 | 7.682642e-49 | -8.615850e-47 |
| Msa0842710 | Msa1248310 | 0.801601 | 8.338203e-49 | -8.615850e-47 |
| Msa0844490 | Msa1248310 | 0.823125 | 1.639277e-53 | -8.615850e-47 |
| Msa0846210 | Msa1248310 | 0.800064 | 1.717295e-48 | -8.615850e-47 |
| Msa0846330 | Msa1248310 | 0.810737 | 9.930736e-51 | -8.615850e-47 |
| Msa0846350 | Msa1248310 | 0.809197 | 2.131740e-50 | -8.615850e-47 |
| Msa0848960 | Msa1248310 | 0.848202 | 7.123630e-60 | -8.615850e-47 |
| Msa0858980 | Msa1248310 | 0.868132 | 8.196192e-66 | -8.615850e-47 |
| Msa0864070 | Msa1248310 | 0.846322 | 2.335459e-59 | -8.615850e-47 |
| Msa0877250 | Msa1248310 | 0.832639 | 8.428896e-56 | -8.615850e-47 |
| Msa0888370 | Msa1248310 | 0.819999 | 8.648645e-53 | -8.615850e-47 |
| Msa0888420 | Msa1248310 | 0.822657 | 2.107008e-53 | -8.615850e-47 |
| Msa0896080 | Msa1248310 | 0.804543 | 2.053478e-49 | -8.615850e-47 |
| Msa0897440 | Msa1248310 | 0.818504 | 1.893981e-52 | -8.615850e-47 |
| Msa0899430 | Msa1248310 | 0.869331 | 3.353865e-66 | -8.615850e-47 |
| Msa0899450 | Msa1248310 | 0.842994 | 1.840488e-58 | -8.615850e-47 |
| Msa0900910 | Msa1248310 | 0.836267 | 1.034368e-56 | -8.615850e-47 |
| Msa0900970 | Msa1248310 | 0.819355 | 1.213107e-52 | -8.615850e-47 |
| Msa0901070 | Msa1248310 | 0.855664 | 5.418731e-62 | -8.615850e-47 |
| Msa0914270 | Msa1248310 | 0.845830 | 3.178814e-59 | -8.615850e-47 |
| Msa0914760 | Msa1248310 | 0.816135 | 6.464944e-52 | -8.615850e-47 |
| Msa0924050 | Msa1248310 | 0.834125 | 3.590242e-56 | -8.615850e-47 |
| Msa0924060 | Msa1248310 | 0.835142 | 1.992572e-56 | -8.615850e-47 |
| Msa0927380 | Msa1248310 | 0.832932 | 7.127174e-56 | -8.615850e-47 |
| Msa0952720 | Msa1248310 | 0.817389 | 3.382567e-52 | -8.615850e-47 |
| Msa0956270 | Msa1248310 | 0.801169 | 1.022278e-48 | -8.615850e-47 |
| Msa0958550 | Msa1248310 | 0.854018 | 1.627059e-61 | -8.615850e-47 |
| Msa0964900 | Msa1248310 | 0.817557 | 3.099665e-52 | -8.615850e-47 |
| Msa0966750 | Msa1248310 | 0.804721 | 1.885754e-49 | -8.615850e-47 |
| Msa0967280 | Msa1248310 | 0.919764 | 2.993723e-87 | -8.615850e-47 |
| Msa0974080 | Msa1248310 | 0.816206 | 6.232392e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248310 | MtrunA17_Chr2g0287651 | 58.915 | 387 | 114 | 2 | 110 | 451 | 58 | 444 | 1.66e-164 | 486 |
| Msa1248310 | MtrunA17_Chr1g0203051 | 32.710 | 428 | 235 | 5 | 68 | 448 | 22 | 443 | 2.39e-71 | 237 |
| Msa1248310 | MtrunA17_Chr5g0448761 | 29.759 | 373 | 206 | 7 | 131 | 448 | 64 | 435 | 7.51e-37 | 144 |
| Msa1248310 | MtrunA17_Chr2g0324011 | 26.882 | 372 | 217 | 6 | 131 | 451 | 14 | 381 | 4.41e-33 | 131 |
| Msa1248310 | MtrunA17_Chr1g0202341 | 25.661 | 378 | 222 | 8 | 126 | 450 | 50 | 421 | 2.48e-31 | 127 |
| Msa1248310 | MtrunA17_Chr8g0363841 | 26.923 | 364 | 209 | 7 | 137 | 448 | 27 | 385 | 5.68e-31 | 126 |
| Msa1248310 | MtrunA17_Chr3g0082121 | 26.738 | 374 | 206 | 9 | 129 | 448 | 45 | 404 | 8.90e-31 | 125 |
| Msa1248310 | MtrunA17_Chr5g0441581 | 26.016 | 369 | 208 | 8 | 131 | 449 | 36 | 389 | 1.20e-30 | 125 |
| Msa1248310 | MtrunA17_Chr1g0207551 | 24.728 | 368 | 220 | 6 | 131 | 447 | 38 | 399 | 1.11e-28 | 119 |
| Msa1248310 | MtrunA17_Chr2g0296781 | 26.359 | 368 | 213 | 8 | 131 | 448 | 1 | 360 | 2.00e-28 | 118 |
| Msa1248310 | MtrunA17_Chr6g0458391 | 26.098 | 387 | 206 | 12 | 118 | 448 | 214 | 576 | 5.46e-28 | 117 |
| Msa1248310 | MtrunA17_Chr1g0203721 | 24.869 | 382 | 228 | 9 | 120 | 448 | 59 | 434 | 2.22e-26 | 112 |
| Msa1248310 | MtrunA17_Chr3g0080351 | 23.529 | 374 | 199 | 9 | 126 | 437 | 75 | 423 | 1.14e-23 | 104 |
| Msa1248310 | MtrunA17_Chr2g0329031 | 23.784 | 370 | 218 | 9 | 130 | 448 | 17 | 373 | 1.70e-23 | 103 |
| Msa1248310 | MtrunA17_Chr5g0431001 | 26.582 | 316 | 175 | 8 | 139 | 399 | 73 | 386 | 5.15e-23 | 101 |
| Msa1248310 | MtrunA17_Chr2g0276841 | 25.000 | 372 | 214 | 11 | 133 | 445 | 76 | 441 | 8.52e-23 | 101 |
| Msa1248310 | MtrunA17_Chr1g0198761 | 24.658 | 365 | 213 | 9 | 133 | 437 | 53 | 415 | 1.90e-22 | 100 |
| Msa1248310 | MtrunA17_Chr6g0477261 | 25.630 | 238 | 128 | 3 | 260 | 448 | 12 | 249 | 6.22e-22 | 99.0 |
| Msa1248310 | MtrunA17_Chr8g0389811 | 35.227 | 176 | 104 | 4 | 65 | 230 | 12 | 187 | 4.78e-21 | 90.9 |
| Msa1248310 | MtrunA17_Chr2g0294841 | 23.832 | 428 | 245 | 10 | 89 | 445 | 2 | 419 | 1.60e-19 | 91.7 |
| Msa1248310 | MtrunA17_Chr7g0258861 | 26.667 | 240 | 174 | 2 | 131 | 370 | 14 | 251 | 2.11e-19 | 88.6 |
| Msa1248310 | MtrunA17_Chr1g0164591 | 24.825 | 286 | 156 | 6 | 213 | 448 | 8 | 284 | 5.55e-19 | 87.8 |
| Msa1248310 | MtrunA17_Chr2g0290391 | 23.483 | 379 | 217 | 9 | 131 | 442 | 55 | 427 | 5.96e-19 | 89.7 |
| Msa1248310 | MtrunA17_Chr2g0291591 | 24.557 | 395 | 213 | 13 | 114 | 445 | 52 | 424 | 2.02e-18 | 87.8 |
| Msa1248310 | MtrunA17_Chr1g0196541 | 22.102 | 371 | 225 | 9 | 131 | 448 | 1 | 360 | 7.38e-18 | 86.3 |
| Msa1248310 | MtrunA17_Chr1g0171741 | 23.938 | 259 | 174 | 5 | 2 | 258 | 26 | 263 | 4.15e-15 | 75.1 |
| Msa1248310 | MtrunA17_Chr6g0473421 | 42.500 | 80 | 46 | 0 | 123 | 202 | 51 | 130 | 2.24e-14 | 70.5 |
| Msa1248310 | MtrunA17_Chr2g0331371 | 30.233 | 172 | 107 | 1 | 73 | 244 | 14 | 172 | 5.05e-14 | 70.9 |
| Msa1248310 | MtrunA17_Chr8g0340801 | 33.962 | 106 | 68 | 1 | 241 | 346 | 4 | 107 | 2.92e-13 | 65.9 |
| Msa1248310 | MtrunA17_Chr2g0291581 | 21.774 | 372 | 219 | 9 | 129 | 448 | 73 | 424 | 8.35e-13 | 70.5 |
| Msa1248310 | MtrunA17_Chr2g0329361 | 36.752 | 117 | 71 | 3 | 121 | 235 | 55 | 170 | 1.07e-12 | 67.8 |
| Msa1248310 | MtrunA17_Chr7g0238821 | 33.036 | 112 | 70 | 3 | 131 | 241 | 1 | 108 | 6.77e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1248310 | AT4G38180.1 | 29.301 | 372 | 205 | 8 | 131 | 448 | 77 | 444 | 1.44e-35 | 140 |
| Msa1248310 | AT4G15090.1 | 26.486 | 370 | 216 | 7 | 131 | 448 | 55 | 420 | 3.22e-35 | 139 |
| Msa1248310 | AT4G15090.5 | 26.486 | 370 | 216 | 7 | 131 | 448 | 55 | 420 | 3.22e-35 | 139 |
| Msa1248310 | AT4G15090.3 | 26.486 | 370 | 216 | 7 | 131 | 448 | 55 | 420 | 3.22e-35 | 139 |
| Msa1248310 | AT4G15090.2 | 26.486 | 370 | 216 | 7 | 131 | 448 | 55 | 420 | 3.22e-35 | 139 |
| Msa1248310 | AT4G15090.4 | 26.486 | 370 | 216 | 7 | 131 | 448 | 55 | 420 | 3.22e-35 | 139 |
| Msa1248310 | AT3G22170.2 | 24.045 | 445 | 236 | 11 | 81 | 448 | 10 | 429 | 9.65e-26 | 111 |
| Msa1248310 | AT3G22170.1 | 24.045 | 445 | 236 | 11 | 81 | 448 | 10 | 429 | 9.65e-26 | 111 |
| Msa1248310 | AT1G10240.2 | 25.628 | 398 | 233 | 10 | 109 | 445 | 24 | 419 | 1.97e-25 | 110 |
| Msa1248310 | AT1G10240.1 | 25.628 | 398 | 233 | 10 | 109 | 445 | 24 | 419 | 1.97e-25 | 110 |
| Msa1248310 | AT1G76320.2 | 23.989 | 371 | 215 | 8 | 131 | 448 | 1 | 357 | 9.12e-23 | 102 |
| Msa1248310 | AT1G76320.1 | 23.989 | 371 | 215 | 8 | 131 | 448 | 1 | 357 | 1.05e-22 | 101 |
| Msa1248310 | AT1G76320.4 | 23.989 | 371 | 215 | 8 | 131 | 448 | 1 | 357 | 1.05e-22 | 101 |
| Msa1248310 | AT1G76320.3 | 23.989 | 371 | 215 | 8 | 131 | 448 | 1 | 357 | 1.83e-22 | 100 |
| Msa1248310 | AT1G52520.1 | 24.868 | 378 | 198 | 12 | 131 | 448 | 89 | 440 | 1.62e-17 | 85.9 |
| Msa1248310 | AT5G28530.5 | 23.249 | 357 | 240 | 11 | 105 | 442 | 27 | 368 | 1.35e-15 | 79.7 |
| Msa1248310 | AT5G28530.4 | 23.249 | 357 | 240 | 11 | 105 | 442 | 27 | 368 | 1.41e-15 | 79.7 |
| Msa1248310 | AT5G28530.3 | 23.056 | 373 | 222 | 8 | 133 | 442 | 61 | 431 | 4.38e-15 | 78.2 |
| Msa1248310 | AT5G28530.2 | 23.056 | 373 | 222 | 8 | 133 | 442 | 61 | 431 | 4.38e-15 | 78.2 |
| Msa1248310 | AT5G28530.1 | 23.056 | 373 | 222 | 8 | 133 | 442 | 61 | 431 | 4.56e-15 | 78.2 |
| Msa1248310 | AT3G07500.1 | 33.571 | 140 | 85 | 4 | 100 | 234 | 2 | 138 | 1.04e-11 | 64.7 |
Find 83 sgRNAs with CRISPR-Local
Find 204 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAAGGAATTTGAAGAGTTT+TGG | 0.199469 | 8_2:-42024840 | Msa1248310:CDS |
| GACGTTTGAAATGTCTATTT+TGG | 0.217062 | 8_2:-42025256 | Msa1248310:CDS |
| AATAAGAACTTGTCATATAA+TGG | 0.247315 | 8_2:-42025468 | Msa1248310:CDS |
| TGCATTTACACCTTGTTTAT+CGG | 0.260369 | 8_2:-42025541 | Msa1248310:CDS |
| TGTTCACTACAGACCCAAAA+AGG | 0.266221 | 8_2:-42025627 | Msa1248310:CDS |
| AGATCAGATTATTTCTGTTT+TGG | 0.278600 | 8_2:-42025218 | Msa1248310:CDS |
| GCTGACTTGGTGAGGGAAAA+TGG | 0.281170 | 8_2:-42024817 | Msa1248310:CDS |
| CCATCTGTTACAACTGCTTT+TGG | 0.282718 | 8_2:+42025015 | None:intergenic |
| TTCCTTGTTCTCCTATGTTT+TGG | 0.295938 | 8_2:+42024771 | None:intergenic |
| AGTGATGATGGTGGTTGTTC+TGG | 0.317361 | 8_2:-42026103 | Msa1248310:CDS |
| ATTAACTGCTGAAGGAATAA+TGG | 0.327415 | 8_2:-42025882 | Msa1248310:CDS |
| TTCTATGAGGGAGGCGATAA+AGG | 0.336989 | 8_2:-42024986 | Msa1248310:CDS |
| CTGTTAAGAAGAGTGATATT+AGG | 0.348071 | 8_2:-42025790 | Msa1248310:CDS |
| ATAAGAACTTGTCATATAAT+GGG | 0.403187 | 8_2:-42025467 | Msa1248310:CDS |
| CAAAGACGATGACGCGTACT+TGG | 0.404655 | 8_2:+42024955 | None:intergenic |
| TGCTGAAGGAATAATGGAAA+TGG | 0.417359 | 8_2:-42025876 | Msa1248310:CDS |
| CGCGTCATCGTCTTTGTGCT+TGG | 0.430608 | 8_2:-42024948 | Msa1248310:CDS |
| TGTAAATGCACAACACTAGA+TGG | 0.434308 | 8_2:+42025554 | None:intergenic |
| GATTATAGTGTTGGTGATAA+AGG | 0.444719 | 8_2:-42026079 | Msa1248310:CDS |
| TTTAAGTACTGTAAGTGTAA+AGG | 0.451106 | 8_2:-42025818 | Msa1248310:CDS |
| GACGATAGTTCTGATGAAAC+TGG | 0.457084 | 8_2:-42026136 | Msa1248310:CDS |
| AAGGGTGGATATCCTGGTGT+TGG | 0.458467 | 8_2:-42025428 | Msa1248310:CDS |
| GCTCAGAAGGGTGGATATCC+TGG | 0.461189 | 8_2:-42025434 | Msa1248310:CDS |
| AAACCTATCCGATGATTGTT+GGG | 0.461967 | 8_2:-42026258 | None:intergenic |
| TAGTGAACACGAAGCCTAGC+TGG | 0.465685 | 8_2:+42025641 | None:intergenic |
| GCAGATAAAGCACAAATTGA+TGG | 0.466709 | 8_2:-42025506 | Msa1248310:CDS |
| CACTAGATGGAGTAAGTTCA+TGG | 0.468010 | 8_2:+42025567 | None:intergenic |
| TGTTCTGGTGATTATAGTGT+TGG | 0.469535 | 8_2:-42026088 | Msa1248310:CDS |
| GAGAGAAGAAGCATTTATCA+AGG | 0.474767 | 8_2:-42025709 | Msa1248310:CDS |
| AGGGTGGATATCCTGGTGTT+GGG | 0.476260 | 8_2:-42025427 | Msa1248310:CDS |
| CAATATTCTACCACTGATGA+TGG | 0.484309 | 8_2:-42025278 | Msa1248310:CDS |
| AATAATGGAAATGGAATTTG+CGG | 0.487093 | 8_2:-42025867 | Msa1248310:CDS |
| GGGATACATTGTGGCTCAGA+AGG | 0.492920 | 8_2:-42025447 | Msa1248310:CDS |
| GAAACCTATCCGATGATTGT+TGG | 0.493181 | 8_2:-42026259 | None:intergenic |
| AATGTAGATGATAGTTCTGA+TGG | 0.493462 | 8_2:-42026202 | Msa1248310:CDS |
| GCAGTATGTATGCAACAAGC+AGG | 0.502107 | 8_2:-42025738 | Msa1248310:CDS |
| TGTAGTTGTTGGTGAGGAAA+TGG | 0.504666 | 8_2:-42025918 | Msa1248310:CDS |
| GAAGATGATGATGTAGTTGT+TGG | 0.505754 | 8_2:-42025929 | Msa1248310:CDS |
| AGTGAAGGTCATGGTAATGA+AGG | 0.507811 | 8_2:-42025983 | Msa1248310:CDS |
| ATAATGGAAATGGAATTTGC+GGG | 0.512795 | 8_2:-42025866 | Msa1248310:CDS |
| CCGATGATTGTTGGGAGTCA+AGG | 0.516932 | 8_2:-42026250 | Msa1248310:CDS |
| ATAAATTCATTAACTGCTGA+AGG | 0.519495 | 8_2:-42025890 | Msa1248310:CDS |
| CCTTGACTCCCAACAATCAT+CGG | 0.519588 | 8_2:+42026250 | None:intergenic |
| AGCATTTATCAAGGTCAGAT+AGG | 0.519899 | 8_2:-42025700 | Msa1248310:CDS |
| CAGATGGTGACGGTTCTATG+AGG | 0.536155 | 8_2:-42024999 | Msa1248310:CDS |
| CAGAATTCTCAAGCGAATGC+AGG | 0.540569 | 8_2:-42026160 | Msa1248310:CDS |
| TAACCCAGGGATTGTTCTCA+AGG | 0.542014 | 8_2:+42024794 | None:intergenic |
| TGTTTATCGGCAAATATTCG+AGG | 0.554010 | 8_2:-42025528 | Msa1248310:CDS |
| CGAATATTTGCCGATAAACA+AGG | 0.558539 | 8_2:+42025531 | None:intergenic |
| ATGGCCTTGAGAACAATCCC+TGG | 0.565953 | 8_2:-42024798 | Msa1248310:CDS |
| TTCTTAGTGAACCCAACACC+AGG | 0.567834 | 8_2:+42025416 | None:intergenic |
| TTGTTGGTGAGGAAATGGTA+AGG | 0.572827 | 8_2:-42025913 | Msa1248310:CDS |
| TACATTGTGGCTCAGAAGGG+TGG | 0.583038 | 8_2:-42025443 | Msa1248310:CDS |
| CAGTATGTATGCAACAAGCA+GGG | 0.584535 | 8_2:-42025737 | Msa1248310:CDS |
| CCAAAAGCAGTTGTAACAGA+TGG | 0.588696 | 8_2:-42025015 | Msa1248310:CDS |
| AGAGGAATGTGGATCAGTTG+AGG | 0.594052 | 8_2:+42025304 | None:intergenic |
| GGAGGCAATGAAAGTGATGA+TGG | 0.602419 | 8_2:-42026115 | Msa1248310:CDS |
| TCATATAATGGGATACATTG+TGG | 0.603031 | 8_2:-42025456 | Msa1248310:CDS |
| GGTGAAGATGATGAAAGTCA+AGG | 0.619507 | 8_2:-42026058 | Msa1248310:CDS |
| GGTCATGGTAATGAAGGTCA+TGG | 0.621031 | 8_2:-42025977 | Msa1248310:CDS |
| AGATGGTGACGGTTCTATGA+GGG | 0.626993 | 8_2:-42024998 | Msa1248310:CDS |
| TGGCCTTGAGAACAATCCCT+GGG | 0.628290 | 8_2:-42024797 | Msa1248310:CDS |
| GAATATTGACAAGAGGAATG+TGG | 0.631435 | 8_2:+42025293 | None:intergenic |
| AGTATGTATGCAACAAGCAG+GGG | 0.634341 | 8_2:-42025736 | Msa1248310:CDS |
| ATGTAGATGATAGTTCTGAT+GGG | 0.634382 | 8_2:-42026201 | Msa1248310:CDS |
| GGATACATTGTGGCTCAGAA+GGG | 0.635876 | 8_2:-42025446 | Msa1248310:CDS |
| GATAGTTCTGATGGGAGTCG+TGG | 0.635892 | 8_2:-42026193 | Msa1248310:CDS |
| CTCGTACAAAGTGTCCAGCT+AGG | 0.644688 | 8_2:-42025655 | Msa1248310:CDS |
| ATTGATGGTCTTCAATTACA+CGG | 0.645357 | 8_2:-42025491 | Msa1248310:CDS |
| AGTGGTAGAATATTGACAAG+AGG | 0.645661 | 8_2:+42025286 | None:intergenic |
| AATGAAGGTCATGGTAGTGA+AGG | 0.653004 | 8_2:-42025968 | Msa1248310:CDS |
| TTTCAAACGTCCATCATCAG+TGG | 0.659865 | 8_2:+42025268 | None:intergenic |
| TGGTGACGGTTCTATGAGGG+AGG | 0.661344 | 8_2:-42024995 | Msa1248310:CDS |
| TCCCTGGGTTACCAAAACAT+AGG | 0.662422 | 8_2:-42024782 | None:intergenic |
| TGATGATGTAGTTGTTGGTG+AGG | 0.665725 | 8_2:-42025924 | Msa1248310:CDS |
| TTAACGATGAGATTGTAATG+AGG | 0.666140 | 8_2:-42025760 | Msa1248310:CDS |
| GGTGATGAAAGTGAAGGTCA+TGG | 0.683798 | 8_2:-42025992 | Msa1248310:CDS |
| GCAGTTGTAACAGATGGTGA+CGG | 0.686599 | 8_2:-42025009 | Msa1248310:CDS |
| GGCAATGAAAGTGATGATGG+TGG | 0.706532 | 8_2:-42026112 | Msa1248310:CDS |
| GATAGTTCTGATGAAACTGG+AGG | 0.707194 | 8_2:-42026133 | Msa1248310:CDS |
| AGTGAAGGTGATGAAACTGA+AGG | 0.712471 | 8_2:-42026013 | Msa1248310:CDS |
| AGTGAAAGTGATGAAAGTGA+AGG | 0.717258 | 8_2:-42026028 | Msa1248310:CDS |
| ACTGAAGGTGATGAAAGTGA+AGG | 0.722369 | 8_2:-42025998 | Msa1248310:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr8_2:42025562-42025581 | Msa1248310:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr8_2:42025563-42025582 | Msa1248310:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr8_2:42025956-42025975 | Msa1248310:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr8_2:42025957-42025976 | Msa1248310:CDS | 20.0% |
| !! | AATAAGAACTTGTCATATAA+TGG | - | chr8_2:42025562-42025581 | Msa1248310:CDS | 20.0% |
| !! | ATAAGAACTTGTCATATAAT+GGG | - | chr8_2:42025563-42025582 | Msa1248310:CDS | 20.0% |
| !! | AAACAATAGAAACTTATATG+TGG | - | chr8_2:42025956-42025975 | Msa1248310:CDS | 20.0% |
| !! | AACAATAGAAACTTATATGT+GGG | - | chr8_2:42025957-42025976 | Msa1248310:CDS | 20.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr8_2:42025140-42025159 | Msa1248310:intron | 25.0% |
| !! | AATAATGGAAATGGAATTTG+CGG | - | chr8_2:42025163-42025182 | Msa1248310:intron | 25.0% |
| !! | TTTAAGTACTGTAAGTGTAA+AGG | - | chr8_2:42025212-42025231 | Msa1248310:CDS | 25.0% |
| !! | ATAACATATCTACCCTTTTT+GGG | + | chr8_2:42025419-42025438 | None:intergenic | 25.0% |
| !! | AAAAATGCGTGTTGTTATTA+AGG | - | chr8_2:42025661-42025680 | Msa1248310:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr8_2:42025775-42025794 | Msa1248310:CDS | 25.0% |
| !!! | AGATCAGATTATTTCTGTTT+TGG | - | chr8_2:42025812-42025831 | Msa1248310:CDS | 25.0% |
| ! | TTTCATACAATCTAGAAAAC+TGG | + | chr8_2:42025989-42026008 | None:intergenic | 25.0% |
| !!! | TGTTAACAATTCAGCTTTTT+TGG | - | chr8_2:42026131-42026150 | Msa1248310:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr8_2:42026167-42026186 | Msa1248310:CDS | 25.0% |
| ! | ATAAATTCATTAACTGCTGA+AGG | - | chr8_2:42025140-42025159 | Msa1248310:intron | 25.0% |
| !! | AATAATGGAAATGGAATTTG+CGG | - | chr8_2:42025163-42025182 | Msa1248310:intron | 25.0% |
| !! | TTTAAGTACTGTAAGTGTAA+AGG | - | chr8_2:42025212-42025231 | Msa1248310:CDS | 25.0% |
| !! | ATAACATATCTACCCTTTTT+GGG | + | chr8_2:42025419-42025438 | None:intergenic | 25.0% |
| !! | AAAAATGCGTGTTGTTATTA+AGG | - | chr8_2:42025661-42025680 | Msa1248310:CDS | 25.0% |
| !!! | ACGTTTGAAATGTCTATTTT+GGG | - | chr8_2:42025775-42025794 | Msa1248310:CDS | 25.0% |
| !!! | AGATCAGATTATTTCTGTTT+TGG | - | chr8_2:42025812-42025831 | Msa1248310:CDS | 25.0% |
| ! | TTTCATACAATCTAGAAAAC+TGG | + | chr8_2:42025989-42026008 | None:intergenic | 25.0% |
| !!! | TGTTAACAATTCAGCTTTTT+TGG | - | chr8_2:42026131-42026150 | Msa1248310:CDS | 25.0% |
| !! | AGCAATGTACTCTAATTTTA+CGG | - | chr8_2:42026167-42026186 | Msa1248310:CDS | 25.0% |
| !! | AATGTAGATGATAGTTCTGA+TGG | - | chr8_2:42024828-42024847 | Msa1248310:CDS | 30.0% |
| !! | ATGTAGATGATAGTTCTGAT+GGG | - | chr8_2:42024829-42024848 | Msa1248310:CDS | 30.0% |
| !! | GATTATAGTGTTGGTGATAA+AGG | - | chr8_2:42024951-42024970 | Msa1248310:CDS | 30.0% |
| ATTAACTGCTGAAGGAATAA+TGG | - | chr8_2:42025148-42025167 | Msa1248310:intron | 30.0% | |
| ! | ATAATGGAAATGGAATTTGC+GGG | - | chr8_2:42025164-42025183 | Msa1248310:intron | 30.0% |
| CTGTTAAGAAGAGTGATATT+AGG | - | chr8_2:42025240-42025259 | Msa1248310:CDS | 30.0% | |
| TTAACGATGAGATTGTAATG+AGG | - | chr8_2:42025270-42025289 | Msa1248310:CDS | 30.0% | |
| ! | CATAACATATCTACCCTTTT+TGG | + | chr8_2:42025420-42025439 | None:intergenic | 30.0% |
| ! | TGCATTTACACCTTGTTTAT+CGG | - | chr8_2:42025489-42025508 | Msa1248310:CDS | 30.0% |
| ! | ATTGATGGTCTTCAATTACA+CGG | - | chr8_2:42025539-42025558 | Msa1248310:CDS | 30.0% |
| ! | TCATATAATGGGATACATTG+TGG | - | chr8_2:42025574-42025593 | Msa1248310:CDS | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr8_2:42025774-42025793 | Msa1248310:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr8_2:42025915-42025934 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr8_2:42025913-42025932 | Msa1248310:CDS | 30.0% | |
| !!! | AACAATTCAGCTTTTTTGGA+TGG | - | chr8_2:42026135-42026154 | Msa1248310:CDS | 30.0% |
| ! | AGAAGGAATTTGAAGAGTTT+TGG | - | chr8_2:42026190-42026209 | Msa1248310:CDS | 30.0% |
| ! | GAAGGAATTTGAAGAGTTTT+GGG | - | chr8_2:42026191-42026210 | Msa1248310:CDS | 30.0% |
| !! | AATGTAGATGATAGTTCTGA+TGG | - | chr8_2:42024828-42024847 | Msa1248310:CDS | 30.0% |
| !! | ATGTAGATGATAGTTCTGAT+GGG | - | chr8_2:42024829-42024848 | Msa1248310:CDS | 30.0% |
| !! | GATTATAGTGTTGGTGATAA+AGG | - | chr8_2:42024951-42024970 | Msa1248310:CDS | 30.0% |
| ATTAACTGCTGAAGGAATAA+TGG | - | chr8_2:42025148-42025167 | Msa1248310:intron | 30.0% | |
| ! | ATAATGGAAATGGAATTTGC+GGG | - | chr8_2:42025164-42025183 | Msa1248310:intron | 30.0% |
| CTGTTAAGAAGAGTGATATT+AGG | - | chr8_2:42025240-42025259 | Msa1248310:CDS | 30.0% | |
| TTAACGATGAGATTGTAATG+AGG | - | chr8_2:42025270-42025289 | Msa1248310:CDS | 30.0% | |
| ! | CATAACATATCTACCCTTTT+TGG | + | chr8_2:42025420-42025439 | None:intergenic | 30.0% |
| ! | TGCATTTACACCTTGTTTAT+CGG | - | chr8_2:42025489-42025508 | Msa1248310:CDS | 30.0% |
| ! | ATTGATGGTCTTCAATTACA+CGG | - | chr8_2:42025539-42025558 | Msa1248310:CDS | 30.0% |
| ! | TCATATAATGGGATACATTG+TGG | - | chr8_2:42025574-42025593 | Msa1248310:CDS | 30.0% |
| !! | GACGTTTGAAATGTCTATTT+TGG | - | chr8_2:42025774-42025793 | Msa1248310:CDS | 30.0% |
| CAAATATAACTGTTTGTGAG+TGG | + | chr8_2:42025915-42025934 | None:intergenic | 30.0% | |
| CACTCACAAACAGTTATATT+TGG | - | chr8_2:42025913-42025932 | Msa1248310:CDS | 30.0% | |
| !!! | AACAATTCAGCTTTTTTGGA+TGG | - | chr8_2:42026135-42026154 | Msa1248310:CDS | 30.0% |
| ! | AGAAGGAATTTGAAGAGTTT+TGG | - | chr8_2:42026190-42026209 | Msa1248310:CDS | 30.0% |
| ! | GAAGGAATTTGAAGAGTTTT+GGG | - | chr8_2:42026191-42026210 | Msa1248310:CDS | 30.0% |
| TGTTCTGGTGATTATAGTGT+TGG | - | chr8_2:42024942-42024961 | Msa1248310:CDS | 35.0% | |
| AGTGAAAGTGATGAAAGTGA+AGG | - | chr8_2:42025002-42025021 | Msa1248310:CDS | 35.0% | |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr8_2:42025101-42025120 | Msa1248310:intron | 35.0% |
| ! | TGCTGAAGGAATAATGGAAA+TGG | - | chr8_2:42025154-42025173 | Msa1248310:intron | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr8_2:42025321-42025340 | Msa1248310:CDS | 35.0% |
| AGCATTTATCAAGGTCAGAT+AGG | - | chr8_2:42025330-42025349 | Msa1248310:CDS | 35.0% | |
| TGTAAATGCACAACACTAGA+TGG | + | chr8_2:42025479-42025498 | None:intergenic | 35.0% | |
| CGAATATTTGCCGATAAACA+AGG | + | chr8_2:42025502-42025521 | None:intergenic | 35.0% | |
| TGTTTATCGGCAAATATTCG+AGG | - | chr8_2:42025502-42025521 | Msa1248310:CDS | 35.0% | |
| GCAGATAAAGCACAAATTGA+TGG | - | chr8_2:42025524-42025543 | Msa1248310:CDS | 35.0% | |
| GAATATTGACAAGAGGAATG+TGG | + | chr8_2:42025740-42025759 | None:intergenic | 35.0% | |
| AGTGGTAGAATATTGACAAG+AGG | + | chr8_2:42025747-42025766 | None:intergenic | 35.0% | |
| CAATATTCTACCACTGATGA+TGG | - | chr8_2:42025752-42025771 | Msa1248310:CDS | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr8_2:42025782-42025801 | Msa1248310:CDS | 35.0% |
| !!! | TTATTTCTGTTTTGGCGATG+TGG | - | chr8_2:42025820-42025839 | Msa1248310:CDS | 35.0% |
| GAACAAATACAACTATCCGT+TGG | - | chr8_2:42025868-42025887 | Msa1248310:CDS | 35.0% | |
| ATATAACTGTTTGTGAGTGG+TGG | + | chr8_2:42025912-42025931 | None:intergenic | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr8_2:42025924-42025943 | Msa1248310:CDS | 35.0% |
| ! | GTACTCTAATTTTACGGAGA+AGG | - | chr8_2:42026173-42026192 | Msa1248310:CDS | 35.0% |
| TGTTCTGGTGATTATAGTGT+TGG | - | chr8_2:42024942-42024961 | Msa1248310:CDS | 35.0% | |
| AGTGAAAGTGATGAAAGTGA+AGG | - | chr8_2:42025002-42025021 | Msa1248310:CDS | 35.0% | |
| ! | GAAGATGATGATGTAGTTGT+TGG | - | chr8_2:42025101-42025120 | Msa1248310:intron | 35.0% |
| ! | TGCTGAAGGAATAATGGAAA+TGG | - | chr8_2:42025154-42025173 | Msa1248310:intron | 35.0% |
| !! | GAGAGAAGAAGCATTTATCA+AGG | - | chr8_2:42025321-42025340 | Msa1248310:CDS | 35.0% |
| AGCATTTATCAAGGTCAGAT+AGG | - | chr8_2:42025330-42025349 | Msa1248310:CDS | 35.0% | |
| TGTAAATGCACAACACTAGA+TGG | + | chr8_2:42025479-42025498 | None:intergenic | 35.0% | |
| CGAATATTTGCCGATAAACA+AGG | + | chr8_2:42025502-42025521 | None:intergenic | 35.0% | |
| TGTTTATCGGCAAATATTCG+AGG | - | chr8_2:42025502-42025521 | Msa1248310:CDS | 35.0% | |
| GCAGATAAAGCACAAATTGA+TGG | - | chr8_2:42025524-42025543 | Msa1248310:CDS | 35.0% | |
| GAATATTGACAAGAGGAATG+TGG | + | chr8_2:42025740-42025759 | None:intergenic | 35.0% | |
| AGTGGTAGAATATTGACAAG+AGG | + | chr8_2:42025747-42025766 | None:intergenic | 35.0% | |
| CAATATTCTACCACTGATGA+TGG | - | chr8_2:42025752-42025771 | Msa1248310:CDS | 35.0% | |
| !! | AAATGTCTATTTTGGGCAGA+TGG | - | chr8_2:42025782-42025801 | Msa1248310:CDS | 35.0% |
| !!! | TTATTTCTGTTTTGGCGATG+TGG | - | chr8_2:42025820-42025839 | Msa1248310:CDS | 35.0% |
| GAACAAATACAACTATCCGT+TGG | - | chr8_2:42025868-42025887 | Msa1248310:CDS | 35.0% | |
| ATATAACTGTTTGTGAGTGG+TGG | + | chr8_2:42025912-42025931 | None:intergenic | 35.0% | |
| !! | AGTTATATTTGGTGCTGCAT+TGG | - | chr8_2:42025924-42025943 | Msa1248310:CDS | 35.0% |
| ! | GTACTCTAATTTTACGGAGA+AGG | - | chr8_2:42026173-42026192 | Msa1248310:CDS | 35.0% |
| !! | GACGATAGTTCTGATGAAAC+TGG | - | chr8_2:42024894-42024913 | Msa1248310:CDS | 40.0% |
| !! | GATAGTTCTGATGAAACTGG+AGG | - | chr8_2:42024897-42024916 | Msa1248310:CDS | 40.0% |
| GGTGAAGATGATGAAAGTCA+AGG | - | chr8_2:42024972-42024991 | Msa1248310:CDS | 40.0% | |
| AGTGAAGGTGATGAAACTGA+AGG | - | chr8_2:42025017-42025036 | Msa1248310:CDS | 40.0% | |
| ACTGAAGGTGATGAAAGTGA+AGG | - | chr8_2:42025032-42025051 | Msa1248310:CDS | 40.0% | |
| ! | AGTGAAGGTCATGGTAATGA+AGG | - | chr8_2:42025047-42025066 | Msa1248310:intron | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr8_2:42025062-42025081 | Msa1248310:intron | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr8_2:42025106-42025125 | Msa1248310:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr8_2:42025112-42025131 | Msa1248310:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr8_2:42025117-42025136 | Msa1248310:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr8_2:42025293-42025312 | Msa1248310:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr8_2:42025294-42025313 | Msa1248310:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | - | chr8_2:42025403-42025422 | Msa1248310:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr8_2:42025404-42025423 | Msa1248310:CDS | 40.0% | |
| CACTAGATGGAGTAAGTTCA+TGG | + | chr8_2:42025466-42025485 | None:intergenic | 40.0% | |
| TTTCAAACGTCCATCATCAG+TGG | + | chr8_2:42025765-42025784 | None:intergenic | 40.0% | |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr8_2:42026018-42026037 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr8_2:42026015-42026034 | Msa1248310:CDS | 40.0% | |
| !! | GACGATAGTTCTGATGAAAC+TGG | - | chr8_2:42024894-42024913 | Msa1248310:CDS | 40.0% |
| !! | GATAGTTCTGATGAAACTGG+AGG | - | chr8_2:42024897-42024916 | Msa1248310:CDS | 40.0% |
| GGTGAAGATGATGAAAGTCA+AGG | - | chr8_2:42024972-42024991 | Msa1248310:CDS | 40.0% | |
| AGTGAAGGTGATGAAACTGA+AGG | - | chr8_2:42025017-42025036 | Msa1248310:CDS | 40.0% | |
| ACTGAAGGTGATGAAAGTGA+AGG | - | chr8_2:42025032-42025051 | Msa1248310:CDS | 40.0% | |
| ! | AGTGAAGGTCATGGTAATGA+AGG | - | chr8_2:42025047-42025066 | Msa1248310:intron | 40.0% |
| ! | AATGAAGGTCATGGTAGTGA+AGG | - | chr8_2:42025062-42025081 | Msa1248310:intron | 40.0% |
| ! | TGATGATGTAGTTGTTGGTG+AGG | - | chr8_2:42025106-42025125 | Msa1248310:intron | 40.0% |
| ! | TGTAGTTGTTGGTGAGGAAA+TGG | - | chr8_2:42025112-42025131 | Msa1248310:intron | 40.0% |
| ! | TTGTTGGTGAGGAAATGGTA+AGG | - | chr8_2:42025117-42025136 | Msa1248310:intron | 40.0% |
| CAGTATGTATGCAACAAGCA+GGG | - | chr8_2:42025293-42025312 | Msa1248310:CDS | 40.0% | |
| AGTATGTATGCAACAAGCAG+GGG | - | chr8_2:42025294-42025313 | Msa1248310:CDS | 40.0% | |
| TGTTCACTACAGACCCAAAA+AGG | - | chr8_2:42025403-42025422 | Msa1248310:CDS | 40.0% | |
| GTTCACTACAGACCCAAAAA+GGG | - | chr8_2:42025404-42025423 | Msa1248310:CDS | 40.0% | |
| CACTAGATGGAGTAAGTTCA+TGG | + | chr8_2:42025466-42025485 | None:intergenic | 40.0% | |
| TTTCAAACGTCCATCATCAG+TGG | + | chr8_2:42025765-42025784 | None:intergenic | 40.0% | |
| ! | CCATCTGTTACAACTGCTTT+TGG | + | chr8_2:42026018-42026037 | None:intergenic | 40.0% |
| CCAAAAGCAGTTGTAACAGA+TGG | - | chr8_2:42026015-42026034 | Msa1248310:CDS | 40.0% | |
| CAGAATTCTCAAGCGAATGC+AGG | - | chr8_2:42024870-42024889 | Msa1248310:CDS | 45.0% | |
| GGAGGCAATGAAAGTGATGA+TGG | - | chr8_2:42024915-42024934 | Msa1248310:CDS | 45.0% | |
| !! | GGCAATGAAAGTGATGATGG+TGG | - | chr8_2:42024918-42024937 | Msa1248310:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr8_2:42024927-42024946 | Msa1248310:CDS | 45.0% |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr8_2:42025038-42025057 | Msa1248310:CDS | 45.0% | |
| ! | GGTCATGGTAATGAAGGTCA+TGG | - | chr8_2:42025053-42025072 | Msa1248310:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr8_2:42025292-42025311 | Msa1248310:CDS | 45.0% | |
| GGATACATTGTGGCTCAGAA+GGG | - | chr8_2:42025584-42025603 | Msa1248310:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr8_2:42025617-42025636 | None:intergenic | 45.0% | |
| AGAGGAATGTGGATCAGTTG+AGG | + | chr8_2:42025729-42025748 | None:intergenic | 45.0% | |
| GCAGCAGACAAAATCACCAA+CGG | + | chr8_2:42025887-42025906 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr8_2:42025930-42025949 | Msa1248310:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr8_2:42026021-42026040 | Msa1248310:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr8_2:42026032-42026051 | Msa1248310:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr8_2:42026044-42026063 | Msa1248310:CDS | 45.0% | |
| !!! | TGAAGAGTTTTGGGCTGACT+TGG | - | chr8_2:42026200-42026219 | Msa1248310:CDS | 45.0% |
| TAACCCAGGGATTGTTCTCA+AGG | + | chr8_2:42026239-42026258 | None:intergenic | 45.0% | |
| CAGAATTCTCAAGCGAATGC+AGG | - | chr8_2:42024870-42024889 | Msa1248310:CDS | 45.0% | |
| GGAGGCAATGAAAGTGATGA+TGG | - | chr8_2:42024915-42024934 | Msa1248310:CDS | 45.0% | |
| !! | GGCAATGAAAGTGATGATGG+TGG | - | chr8_2:42024918-42024937 | Msa1248310:CDS | 45.0% |
| !! | AGTGATGATGGTGGTTGTTC+TGG | - | chr8_2:42024927-42024946 | Msa1248310:CDS | 45.0% |
| GGTGATGAAAGTGAAGGTCA+TGG | - | chr8_2:42025038-42025057 | Msa1248310:CDS | 45.0% | |
| ! | GGTCATGGTAATGAAGGTCA+TGG | - | chr8_2:42025053-42025072 | Msa1248310:intron | 45.0% |
| GCAGTATGTATGCAACAAGC+AGG | - | chr8_2:42025292-42025311 | Msa1248310:CDS | 45.0% | |
| GGATACATTGTGGCTCAGAA+GGG | - | chr8_2:42025584-42025603 | Msa1248310:CDS | 45.0% | |
| TTCTTAGTGAACCCAACACC+AGG | + | chr8_2:42025617-42025636 | None:intergenic | 45.0% | |
| AGAGGAATGTGGATCAGTTG+AGG | + | chr8_2:42025729-42025748 | None:intergenic | 45.0% | |
| GCAGCAGACAAAATCACCAA+CGG | + | chr8_2:42025887-42025906 | None:intergenic | 45.0% | |
| !! | ATTTGGTGCTGCATTGGTGA+TGG | - | chr8_2:42025930-42025949 | Msa1248310:CDS | 45.0% |
| GCAGTTGTAACAGATGGTGA+CGG | - | chr8_2:42026021-42026040 | Msa1248310:CDS | 45.0% | |
| !! | AGATGGTGACGGTTCTATGA+GGG | - | chr8_2:42026032-42026051 | Msa1248310:CDS | 45.0% |
| TTCTATGAGGGAGGCGATAA+AGG | - | chr8_2:42026044-42026063 | Msa1248310:CDS | 45.0% | |
| !!! | TGAAGAGTTTTGGGCTGACT+TGG | - | chr8_2:42026200-42026219 | Msa1248310:CDS | 45.0% |
| TAACCCAGGGATTGTTCTCA+AGG | + | chr8_2:42026239-42026258 | None:intergenic | 45.0% | |
| !! | GATAGTTCTGATGGGAGTCG+TGG | - | chr8_2:42024837-42024856 | Msa1248310:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr8_2:42025375-42025394 | Msa1248310:CDS | 50.0% |
| TAGTGAACACGAAGCCTAGC+TGG | + | chr8_2:42025392-42025411 | None:intergenic | 50.0% | |
| GGGATACATTGTGGCTCAGA+AGG | - | chr8_2:42025583-42025602 | Msa1248310:CDS | 50.0% | |
| TACATTGTGGCTCAGAAGGG+TGG | - | chr8_2:42025587-42025606 | Msa1248310:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr8_2:42025602-42025621 | Msa1248310:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr8_2:42025603-42025622 | Msa1248310:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr8_2:42026031-42026050 | Msa1248310:CDS | 50.0% |
| CAAAGACGATGACGCGTACT+TGG | + | chr8_2:42026078-42026097 | None:intergenic | 50.0% | |
| !!! | AGTTTTGGGCTGACTTGGTG+AGG | - | chr8_2:42026205-42026224 | Msa1248310:CDS | 50.0% |
| !!! | GTTTTGGGCTGACTTGGTGA+GGG | - | chr8_2:42026206-42026225 | Msa1248310:CDS | 50.0% |
| !! | GCTGACTTGGTGAGGGAAAA+TGG | - | chr8_2:42026213-42026232 | Msa1248310:CDS | 50.0% |
| ! | ATGGCCTTGAGAACAATCCC+TGG | - | chr8_2:42026232-42026251 | Msa1248310:CDS | 50.0% |
| ! | TGGCCTTGAGAACAATCCCT+GGG | - | chr8_2:42026233-42026252 | Msa1248310:CDS | 50.0% |
| !! | GATAGTTCTGATGGGAGTCG+TGG | - | chr8_2:42024837-42024856 | Msa1248310:CDS | 50.0% |
| ! | CTCGTACAAAGTGTCCAGCT+AGG | - | chr8_2:42025375-42025394 | Msa1248310:CDS | 50.0% |
| TAGTGAACACGAAGCCTAGC+TGG | + | chr8_2:42025392-42025411 | None:intergenic | 50.0% | |
| GGGATACATTGTGGCTCAGA+AGG | - | chr8_2:42025583-42025602 | Msa1248310:CDS | 50.0% | |
| TACATTGTGGCTCAGAAGGG+TGG | - | chr8_2:42025587-42025606 | Msa1248310:CDS | 50.0% | |
| AAGGGTGGATATCCTGGTGT+TGG | - | chr8_2:42025602-42025621 | Msa1248310:CDS | 50.0% | |
| AGGGTGGATATCCTGGTGTT+GGG | - | chr8_2:42025603-42025622 | Msa1248310:CDS | 50.0% | |
| !! | CAGATGGTGACGGTTCTATG+AGG | - | chr8_2:42026031-42026050 | Msa1248310:CDS | 50.0% |
| CAAAGACGATGACGCGTACT+TGG | + | chr8_2:42026078-42026097 | None:intergenic | 50.0% | |
| !!! | AGTTTTGGGCTGACTTGGTG+AGG | - | chr8_2:42026205-42026224 | Msa1248310:CDS | 50.0% |
| !!! | GTTTTGGGCTGACTTGGTGA+GGG | - | chr8_2:42026206-42026225 | Msa1248310:CDS | 50.0% |
| !! | GCTGACTTGGTGAGGGAAAA+TGG | - | chr8_2:42026213-42026232 | Msa1248310:CDS | 50.0% |
| ! | ATGGCCTTGAGAACAATCCC+TGG | - | chr8_2:42026232-42026251 | Msa1248310:CDS | 50.0% |
| ! | TGGCCTTGAGAACAATCCCT+GGG | - | chr8_2:42026233-42026252 | Msa1248310:CDS | 50.0% |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr8_2:42025596-42025615 | Msa1248310:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr8_2:42026035-42026054 | Msa1248310:CDS | 55.0% |
| CGCGTCATCGTCTTTGTGCT+TGG | - | chr8_2:42026082-42026101 | Msa1248310:CDS | 55.0% | |
| GCTCAGAAGGGTGGATATCC+TGG | - | chr8_2:42025596-42025615 | Msa1248310:CDS | 55.0% | |
| !! | TGGTGACGGTTCTATGAGGG+AGG | - | chr8_2:42026035-42026054 | Msa1248310:CDS | 55.0% |
| CGCGTCATCGTCTTTGTGCT+TGG | - | chr8_2:42026082-42026101 | Msa1248310:CDS | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 42024783 | 42026269 | 42024783 | ID=Msa1248310;Name=Msa1248310 |
| chr8_2 | mRNA | 42024783 | 42026269 | 42024783 | ID=Msa1248310-mRNA-1;Parent=Msa1248310;Name=Msa1248310-mRNA-1;_AED=0.28;_eAED=0.28;_QI=0|0|0|0.5|1|1|2|0|451 |
| chr8_2 | exon | 42025194 | 42026269 | 42025194 | ID=Msa1248310-mRNA-1:exon:12792;Parent=Msa1248310-mRNA-1 |
| chr8_2 | exon | 42024783 | 42025062 | 42024783 | ID=Msa1248310-mRNA-1:exon:12791;Parent=Msa1248310-mRNA-1 |
| chr8_2 | CDS | 42025194 | 42026269 | 42025194 | ID=Msa1248310-mRNA-1:cds;Parent=Msa1248310-mRNA-1 |
| chr8_2 | CDS | 42024783 | 42025062 | 42024783 | ID=Msa1248310-mRNA-1:cds;Parent=Msa1248310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
