AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0370170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370170 MtrunA17_Chr3g0115111 98.098 736 10 1 1 736 1 732 0.0 1493
Msa0370170 MtrunA17_Chr5g0424301 73.871 731 155 6 15 735 28 732 0.0 1090
Msa0370170 MtrunA17_Chr3g0131001 61.333 750 231 12 1 736 1 705 0.0 865
Msa0370170 MtrunA17_Chr8g0385201 59.634 711 220 11 38 736 12 667 0.0 825
Msa0370170 MtrunA17_Chr3g0082501 52.974 723 280 12 52 735 59 760 0.0 693
Msa0370170 MtrunA17_Chr8g0353121 50.811 740 302 12 37 735 32 750 0.0 686
Msa0370170 MtrunA17_Chr1g0171491 49.335 752 299 10 52 735 56 793 0.0 669
Msa0370170 MtrunA17_Chr1g0180261 41.538 845 342 17 15 735 2 818 0.0 573
Msa0370170 MtrunA17_Chr8g0380791 38.471 785 368 18 45 734 1 765 1.22e-172 514
Msa0370170 MtrunA17_Chr7g0256301 61.244 418 135 8 323 735 396 791 7.96e-168 503
Msa0370170 MtrunA17_Chr7g0256301 54.229 201 88 2 51 251 65 261 1.55e-62 224
Msa0370170 MtrunA17_Chr4g0059911 35.714 238 134 6 44 275 40 264 4.61e-32 128
Msa0370170 MtrunA17_Chr4g0059911 39.583 192 114 2 59 249 11 201 1.08e-31 127
Msa0370170 MtrunA17_Chr8g0377671 32.806 253 123 3 44 250 7 258 2.79e-31 124
Msa0370170 MtrunA17_Chr8g0377671 31.633 196 131 2 23 216 76 270 2.86e-25 106
Msa0370170 MtrunA17_Chr8g0377671 35.971 139 88 1 56 194 134 271 5.46e-19 88.2
Msa0370170 MtrunA17_Chr8g0382971 36.269 193 122 1 57 249 25 216 8.26e-31 124
Msa0370170 MtrunA17_Chr8g0382971 33.654 208 136 2 43 250 58 263 7.71e-28 115
Msa0370170 MtrunA17_Chr8g0382971 37.278 169 101 2 57 221 117 284 4.60e-21 95.5
Msa0370170 MtrunA17_Chr2g0316611 36.190 210 133 1 41 250 20 228 1.05e-30 124
Msa0370170 MtrunA17_Chr2g0316611 36.406 217 135 2 36 250 151 366 1.61e-28 118
Msa0370170 MtrunA17_Chr2g0316611 34.848 198 126 1 34 228 78 275 7.92e-24 104
Msa0370170 MtrunA17_Chr2g0316611 39.216 153 88 2 33 181 215 366 7.52e-21 95.1
Msa0370170 MtrunA17_Chr2g0316611 34.921 126 82 0 127 252 36 161 4.70e-12 68.6
Msa0370170 MtrunA17_Chr2g0316631 36.321 212 134 1 41 252 20 230 1.19e-30 122
Msa0370170 MtrunA17_Chr2g0316631 34.842 221 139 3 34 250 78 297 2.09e-28 116
Msa0370170 MtrunA17_Chr6g0467061 39.106 179 108 1 50 228 12 189 1.16e-29 120
Msa0370170 MtrunA17_Chr6g0467061 36.500 200 122 3 33 228 60 258 1.39e-26 111
Msa0370170 MtrunA17_Chr6g0467061 37.791 172 106 1 57 228 157 327 1.28e-22 99.8
Msa0370170 MtrunA17_Chr6g0467061 38.129 139 81 2 33 167 198 335 5.68e-15 77.0
Msa0370170 MtrunA17_Chr8g0377191 36.181 199 103 2 53 228 8 205 1.17e-28 114
Msa0370170 MtrunA17_Chr8g0377191 33.333 168 112 0 82 249 13 180 6.98e-20 88.6
Msa0370170 MtrunA17_Chr8g0377191 32.432 148 100 0 102 249 10 157 5.59e-17 80.1
Msa0370170 MtrunA17_Chr4g0055371 36.416 173 109 1 58 230 173 344 8.74e-27 114
Msa0370170 MtrunA17_Chr4g0055371 33.333 126 84 0 103 228 171 296 8.60e-15 77.4
Msa0370170 MtrunA17_Chr7g0233351 36.416 173 109 1 58 230 193 364 5.75e-26 112
Msa0370170 MtrunA17_Chr7g0233351 39.655 116 70 0 73 188 253 368 3.19e-20 94.4
Msa0370170 MtrunA17_Chr7g0233351 34.314 102 67 0 149 250 191 292 2.44e-11 66.6
Msa0370170 MtrunA17_Chr8g0377211 39.437 142 84 2 53 194 16 155 6.52e-25 102
Msa0370170 MtrunA17_Chr8g0377211 39.394 132 80 0 85 216 23 154 7.43e-24 99.0
Msa0370170 MtrunA17_Chr8g0377211 38.333 120 74 0 131 250 23 142 2.70e-17 80.1
Msa0370170 MtrunA17_Chr8g0377211 37.097 124 78 0 105 228 20 143 2.89e-17 80.1
Msa0370170 MtrunA17_Chr5g0424111 38.150 173 106 1 58 230 198 369 2.19e-24 107
Msa0370170 MtrunA17_Chr5g0424111 34.000 150 99 0 80 229 196 345 2.70e-17 85.1
Msa0370170 MtrunA17_Chr5g0424111 38.938 113 69 0 73 185 258 370 1.21e-16 83.2
Msa0370170 MtrunA17_Chr5g0424111 31.973 147 100 0 103 249 196 342 3.57e-13 72.4
Msa0370170 MtrunA17_Chr5g0424111 35.878 131 84 0 127 257 197 327 4.45e-13 72.0
Msa0370170 MtrunA17_Chr8g0336161 34.404 218 137 2 13 230 158 369 3.29e-24 106
Msa0370170 MtrunA17_Chr8g0336161 37.931 116 72 0 73 188 258 373 5.72e-18 87.4
Msa0370170 MtrunA17_Chr3g0114791 34.343 198 128 2 32 229 161 356 1.56e-23 104
Msa0370170 MtrunA17_Chr3g0114791 35.398 113 73 0 73 185 246 358 8.66e-14 74.3
Msa0370170 MtrunA17_Chr8g0377221 33.491 212 102 3 56 229 4 214 4.16e-22 97.1
Msa0370170 MtrunA17_Chr8g0377221 33.939 165 96 4 57 219 74 227 4.04e-15 76.3
Msa0370170 MtrunA17_Chr8g0385241 34.826 201 95 3 64 228 13 213 2.55e-21 97.4
Msa0370170 MtrunA17_Chr8g0385241 28.780 205 136 2 56 250 124 328 8.12e-20 92.8
Msa0370170 MtrunA17_Chr8g0385241 29.075 227 126 3 57 249 56 281 6.71e-19 90.1
Msa0370170 MtrunA17_Chr8g0385241 33.121 157 104 1 73 228 173 329 3.82e-16 81.6
Msa0370170 MtrunA17_Chr8g0385241 32.704 159 97 1 80 228 9 167 1.67e-14 76.6
Msa0370170 MtrunA17_Chr8g0385241 29.630 162 112 2 59 219 183 343 9.75e-13 70.9
Msa0370170 MtrunA17_Chr8g0385241 30.216 139 97 0 57 195 204 342 5.59e-12 68.6
Msa0370170 MtrunA17_Chr8g0383331 31.544 149 102 0 101 249 1 149 4.44e-20 87.8
Msa0370170 MtrunA17_Chr8g0383331 32.653 147 99 0 80 226 3 149 3.35e-17 79.7
Msa0370170 MtrunA17_Chr8g0383331 31.973 147 99 1 57 203 4 149 8.95e-17 78.6
Msa0370170 MtrunA17_Chr5g0398011 41.525 118 68 1 55 172 33 149 1.69e-18 83.2
Msa0370170 MtrunA17_Chr5g0398011 33.621 116 77 0 104 219 35 150 1.13e-13 69.3
Msa0370170 MtrunA17_Chr5g0398011 31.579 114 78 0 82 195 36 149 9.47e-12 63.5
Msa0370170 MtrunA17_Chr5g0398021 44.554 101 55 1 57 157 13 112 1.53e-17 80.5
Msa0370170 MtrunA17_Chr5g0398021 39.423 104 63 0 123 226 9 112 1.04e-14 72.4
Msa0370170 MtrunA17_Chr5g0398021 36.364 99 63 0 106 204 15 113 4.51e-13 67.4
Msa0370170 MtrunA17_Chr5g0398021 33.333 99 66 0 151 249 14 112 4.50e-12 64.7
Msa0370170 MtrunA17_Chr8g0383551 28.333 240 110 9 62 250 33 261 9.88e-16 79.7
Msa0370170 MtrunA17_Chr8g0383551 30.769 156 94 5 80 222 109 263 8.25e-14 73.9
Msa0370170 MtrunA17_Chr8g0383551 27.439 164 111 4 67 222 128 291 9.81e-12 67.4
Msa0370170 MtrunA17_Chr1g0210831 35.200 125 79 2 86 209 618 741 4.43e-14 76.3
Msa0370170 MtrunA17_Chr1g0210831 30.400 125 87 0 106 230 615 739 7.40e-12 68.9
Msa0370170 MtrunA17_Chr4g0069951 32.927 164 94 7 432 582 1555 1715 4.71e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0370170 AT1G77740.2 70.972 720 180 6 26 735 53 753 0.0 1041
Msa0370170 AT1G77740.1 70.972 720 180 6 26 735 53 753 0.0 1041
Msa0370170 AT1G21980.1 69.596 717 193 6 26 735 53 751 0.0 1017
Msa0370170 AT2G26420.2 55.082 728 270 15 32 736 26 719 0.0 762
Msa0370170 AT2G26420.3 55.082 728 270 15 32 736 26 719 0.0 762
Msa0370170 AT2G26420.1 54.608 727 261 14 32 736 26 705 0.0 756
Msa0370170 AT3G07960.1 53.857 713 280 13 52 735 22 714 0.0 724
Msa0370170 AT3G07960.1 34.579 107 70 0 144 250 21 127 2.69e-15 80.5
Msa0370170 AT3G56960.2 51.087 736 284 14 52 735 67 778 0.0 723
Msa0370170 AT3G56960.1 51.087 736 284 14 52 735 67 778 0.0 723
Msa0370170 AT2G41210.1 51.153 737 277 14 52 735 65 771 0.0 711
Msa0370170 AT3G07960.3 55.062 563 223 9 52 586 22 582 0.0 605
Msa0370170 AT3G07960.3 34.579 107 70 0 144 250 21 127 5.68e-15 79.3
Msa0370170 AT3G07960.2 55.062 563 223 9 52 586 22 582 0.0 605
Msa0370170 AT3G07960.2 34.579 107 70 0 144 250 21 127 6.82e-15 79.0
Msa0370170 AT3G07960.4 55.062 563 223 9 52 586 22 582 0.0 605
Msa0370170 AT3G07960.4 34.579 107 70 0 144 250 21 127 6.82e-15 79.0
Msa0370170 AT3G09920.3 40.691 811 350 19 29 735 29 812 0.0 561
Msa0370170 AT3G09920.4 40.691 811 350 19 29 735 29 812 0.0 561
Msa0370170 AT3G09920.2 40.691 811 350 19 29 735 29 812 0.0 561
Msa0370170 AT3G09920.1 40.691 811 350 19 29 735 29 812 0.0 561
Msa0370170 AT1G10900.2 40.909 770 353 14 50 736 4 754 0.0 543
Msa0370170 AT1G10900.1 40.909 770 353 14 50 736 4 754 0.0 543
Msa0370170 AT1G10900.3 40.909 770 353 14 50 736 4 754 0.0 543
Msa0370170 AT1G60890.1 39.064 791 349 19 50 734 4 767 2.14e-173 516
Msa0370170 AT1G60890.2 39.037 789 348 19 52 734 18 779 1.82e-172 514
Msa0370170 AT1G01460.1 38.263 426 210 10 357 735 3 422 1.05e-78 259
Msa0370170 AT4G01190.1 36.432 398 195 6 374 732 12 390 1.10e-73 244
Msa0370170 AT4G01190.3 36.432 398 195 6 374 732 22 400 1.90e-73 244
Msa0370170 AT4G01190.2 36.432 398 195 6 374 732 22 400 1.90e-73 244
Msa0370170 AT2G35170.1 33.668 199 126 2 60 258 229 421 2.36e-26 114
Msa0370170 AT4G17080.1 35.028 177 114 1 58 234 258 433 3.20e-25 110
Msa0370170 AT4G17080.1 34.899 149 95 1 80 228 235 381 3.50e-17 85.9
Msa0370170 AT1G77660.1 34.555 191 121 2 43 230 161 350 3.01e-23 103
Msa0370170 AT1G21920.2 35.260 173 111 1 58 230 175 346 1.61e-22 100
Msa0370170 AT1G21920.2 38.261 115 71 0 73 187 235 349 1.38e-15 79.7
Msa0370170 AT1G21920.2 29.240 171 98 1 103 250 173 343 9.49e-13 70.9
Msa0370170 AT1G21920.2 35.849 106 68 0 145 250 169 274 7.60e-12 68.2
Msa0370170 AT1G21920.1 35.260 173 111 1 58 230 175 346 1.95e-22 101
Msa0370170 AT1G21920.1 38.261 115 71 0 73 187 235 349 1.72e-15 79.7
Msa0370170 AT1G21920.1 29.240 171 98 1 103 250 173 343 9.85e-13 71.2
Msa0370170 AT1G21920.1 35.849 106 68 0 145 250 169 274 8.77e-12 68.2
Msa0370170 AT1G34260.2 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
Msa0370170 AT1G34260.1 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
Msa0370170 AT1G34260.3 32.161 199 111 7 401 582 1192 1383 1.36e-14 78.6
Msa0370170 AT1G34260.4 32.161 199 111 7 401 582 952 1143 1.45e-14 78.6
Msa0370170 AT1G75010.1 33.594 128 83 2 83 209 604 730 6.85e-14 75.9
Msa0370170 AT1G75010.1 28.000 125 90 0 106 230 604 728 6.16e-11 66.6

Find 215 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TATGATGTTGTTCTATATTT+TGG 0.034831 3_1:+67698699 Msa0370170:CDS
GTTGAAGGTGGAAAGGATTT+TGG 0.125060 3_1:+67696143 Msa0370170:CDS
ATGGCAAAATCTTCAAAATT+TGG 0.147602 3_1:-67699061 None:intergenic
TTGATTTGAAGGAGAAATTT+TGG 0.169689 3_1:+67696552 Msa0370170:CDS
CGAGTTTAAGTTAGGTAAAA+TGG 0.171327 3_1:+67695692 Msa0370170:CDS
GCCATGCGCTCTGCTCTTGC+TGG 0.224688 3_1:-67698603 None:intergenic
TTAATCTTCAATTGGGTATA+AGG 0.226807 3_1:+67696378 Msa0370170:CDS
CAATAGACTGTTTGATTAAC+AGG 0.251542 3_1:+67699010 Msa0370170:three_prime_UTR
TCACTTGTGACAAAATTCTA+TGG 0.265062 3_1:+67697175 Msa0370170:CDS
ACAATTGAGGAAGCGATTTC+AGG 0.271948 3_1:+67696854 Msa0370170:CDS
CAATTTCGAGCTTTCTTTCC+TGG 0.275413 3_1:-67698960 None:intergenic
CTTTGAACCAATTTCTTTGC+AGG 0.287736 3_1:-67697483 None:intergenic
CTCTCTCTCTCATATCCTTC+TGG 0.292044 3_1:+67695120 Msa0370170:five_prime_UTR
TGTTTCGCCTGCAAAGAAAT+TGG 0.293239 3_1:+67697476 Msa0370170:CDS
GAAGAGGTTTCGTGATTTCT+TGG 0.294492 3_1:+67698833 Msa0370170:CDS
GTATCCGCGCATTTGGATTC+CGG 0.295358 3_1:-67699284 None:intergenic
AAGCAGTTTCGACGGAATTC+TGG 0.296681 3_1:+67696284 Msa0370170:CDS
TTTGGAAGCTGAAGGAATTA+TGG 0.301969 3_1:+67697634 Msa0370170:CDS
TGATAATACTTGTGACAAAA+TGG 0.310651 3_1:+67697691 Msa0370170:CDS
AATTATGGATTACAGTCTTT+TGG 0.313536 3_1:+67697649 Msa0370170:CDS
AAGAGGTTTCGTGATTTCTT+GGG 0.322150 3_1:+67698834 Msa0370170:CDS
CCTTCAGTGAACCATCATTA+TGG 0.332152 3_1:-67699080 None:intergenic
TCTTATGCTTAATCTTCAAT+TGG 0.334042 3_1:+67696370 Msa0370170:CDS
GTTTCAGGAAATCATTGATT+AGG 0.336752 3_1:+67698565 Msa0370170:intron
CCTTCAAGTCAAATCGTCTA+TGG 0.339301 3_1:-67697369 None:intergenic
GTTGGGATGTGTAGATTCTT+TGG 0.344943 3_1:+67699186 Msa0370170:three_prime_UTR
TGGGAATCTGATGGTGAAAA+AGG 0.345497 3_1:+67696179 Msa0370170:CDS
TTTCTGTCTTTCCATTGGTT+GGG 0.355867 3_1:+67699169 Msa0370170:three_prime_UTR
CGAGGAAAAGCTTCCGGAAA+TGG 0.359329 3_1:+67695633 Msa0370170:CDS
GGAACGCTTGTTTGGTTGAA+TGG 0.360362 3_1:+67695930 Msa0370170:CDS
AAGGAAAAGGGAGGTATGTT+TGG 0.362141 3_1:+67695853 Msa0370170:CDS
TAATATCATATTCTACTTTG+TGG 0.362188 3_1:-67699212 None:intergenic
CGAAACTGCTTAATCTCTTT+CGG 0.362194 3_1:-67696272 None:intergenic
CGAACATGTTTCTCAATATG+AGG 0.363324 3_1:+67697150 Msa0370170:CDS
GTAAACACACCTTGCCCTTT+CGG 0.365516 3_1:-67695987 None:intergenic
CAATGCGACAAGGAGTAAAA+TGG 0.367842 3_1:-67698668 None:intergenic
CTAACTTATAGGTACTTATT+CGG 0.368553 3_1:+67697110 Msa0370170:intron
AATTCGATTGTTATGCTTGT+TGG 0.369321 3_1:-67695471 None:intergenic
TTCAATCTTCTTTATTGAAT+GGG 0.369480 3_1:+67696069 Msa0370170:CDS
TTTCAATCTTCTTTATTGAA+TGG 0.371669 3_1:+67696068 Msa0370170:CDS
TAGTGATTGGTGCTATTTAC+TGG 0.377186 3_1:-67695072 None:intergenic
ATAATGTATCGGTGTTGAAT+AGG 0.380784 3_1:+67696225 Msa0370170:CDS
GAGATATTTACAGTGGTTCA+TGG 0.381217 3_1:+67695745 Msa0370170:CDS
CTCGAAATTGATTCGGGTGT+TGG 0.382501 3_1:+67698973 Msa0370170:three_prime_UTR
GAAGTTGCTATGTTGGGAAT+TGG 0.382649 3_1:+67696021 Msa0370170:CDS
TGTCTTGTAGCTCTGCTTCA+AGG 0.388811 3_1:-67697883 None:intergenic
ACGGAAGAGGAACGCTTGTT+TGG 0.389884 3_1:+67695922 Msa0370170:CDS
TCTTACATGGGAACTTTCTT+CGG 0.389949 3_1:+67695540 Msa0370170:CDS
AAGAATGTTCAAGAAGGAAA+AGG 0.390966 3_1:+67695840 Msa0370170:CDS
AAGTAAAGTATCCGCGCATT+TGG 0.391357 3_1:-67699291 None:intergenic
CTCAGGGAGCTTTCATCTCC+TGG 0.397244 3_1:+67696921 Msa0370170:CDS
AACCTCTTCGAGTAAAGCTT+TGG 0.403371 3_1:-67698819 None:intergenic
GTTCTGCTTTGTTTCTACTT+TGG 0.404662 3_1:-67695204 None:intergenic
TACGAAGGCGAGTTTAAGTT+AGG 0.409763 3_1:+67695684 Msa0370170:CDS
AAGGGCAAGGTGTGTTTACT+TGG 0.414183 3_1:+67695991 Msa0370170:CDS
GTACGGCCGGTGGTAGCAAC+CGG 0.415701 3_1:-67695417 None:intergenic
TGCTGAAGTGTGACCGGGTA+CGG 0.416039 3_1:-67695434 None:intergenic
TGATCATAAATCTGTCATCT+TGG 0.417508 3_1:-67696971 None:intergenic
GATTACATGTTAGCTATTTG+TGG 0.418084 3_1:+67696888 Msa0370170:CDS
GATTGCCCATCACGATGAAC+CGG 0.420765 3_1:-67697324 None:intergenic
AAGAAAGCTCGAAATTGATT+CGG 0.421732 3_1:+67698966 Msa0370170:three_prime_UTR
TTAGGTAAAATGGAAGGTTC+TGG 0.422048 3_1:+67695702 Msa0370170:CDS
AGGAAATCATTGATTAGGTT+AGG 0.422069 3_1:+67698570 Msa0370170:intron
TATGAAGGTGAATGGGAAAA+TGG 0.423372 3_1:+67695960 Msa0370170:CDS
ATTGATTCGGGTGTTGGAAT+TGG 0.431077 3_1:+67698979 Msa0370170:three_prime_UTR
TGCTTCCGAGGTTAAGAGAC+CGG 0.436988 3_1:+67696313 Msa0370170:CDS
TGGAAACGAGGAAAAGCTTC+CGG 0.437406 3_1:+67695627 Msa0370170:CDS
CATACCTTCTGGCCTCCAAT+TGG 0.438269 3_1:-67697214 None:intergenic
TTGACCAATACACCAGTCTT+GGG 0.443312 3_1:+67698640 Msa0370170:CDS
ATTGAGATCGAGGTCTTTGA+GGG 0.447025 3_1:-67697449 None:intergenic
ACCGGGTGAAACTATATGTA+AGG 0.448524 3_1:+67696331 Msa0370170:CDS
ACGGAGATTATTATGAAGGT+TGG 0.448575 3_1:+67695811 Msa0370170:CDS
CTTATGCTTAATCTTCAATT+GGG 0.449000 3_1:+67696371 Msa0370170:CDS
TCCGGCTGCTGAAGTGTGAC+CGG 0.449099 3_1:-67695440 None:intergenic
AGAAAGCTCGAAATTGATTC+GGG 0.449961 3_1:+67698967 Msa0370170:three_prime_UTR
TTTGACCAATACACCAGTCT+TGG 0.451828 3_1:+67698639 Msa0370170:CDS
AATTGAGATCGAGGTCTTTG+AGG 0.452408 3_1:-67697450 None:intergenic
AGAATGTTCAAGAAGGAAAA+GGG 0.454701 3_1:+67695841 Msa0370170:CDS
GATCATAAATCTGTCATCTT+GGG 0.456803 3_1:-67696970 None:intergenic
TGGAGTAATCTAGTTATTGA+TGG 0.457170 3_1:-67695164 None:intergenic
CACTTGTGACAAAATTCTAT+GGG 0.459389 3_1:+67697176 Msa0370170:CDS
AATTGATCTGAATAATATCC+AGG 0.461248 3_1:+67698942 Msa0370170:three_prime_UTR
GTACATTGTGTCAAACCAAT+TGG 0.461773 3_1:+67697199 Msa0370170:CDS
TCATCCCAAGACTGGTGTAT+TGG 0.465016 3_1:-67698644 None:intergenic
ACCCAACGGTGATTCTTACA+TGG 0.468531 3_1:+67695527 Msa0370170:CDS
GGAATCGTTATGAAGGTGAA+TGG 0.469561 3_1:+67695952 Msa0370170:CDS
TTCGGCAACAACACACCAAA+CGG 0.472183 3_1:+67695558 Msa0370170:CDS
GGTAACGGAGATTATTATGA+AGG 0.472824 3_1:+67695807 Msa0370170:CDS
TGGAAGAACGGTGTTATTAA+CGG 0.473795 3_1:+67695903 Msa0370170:CDS
GAACGCTTGTTTGGTTGAAT+GGG 0.476408 3_1:+67695931 Msa0370170:CDS
AACAACACACCAAACGGATC+AGG 0.483095 3_1:+67695564 Msa0370170:CDS
CCATAGACGATTTGACTTGA+AGG 0.483414 3_1:+67697369 Msa0370170:CDS
AGAGAGAGGTGCATAGTGAT+TGG 0.484279 3_1:-67695085 None:intergenic
TTTGTGGAAATGCTGCCCTC+AGG 0.484497 3_1:+67696904 Msa0370170:CDS
ATCAATCGATGGAGTTTCGT+TGG 0.484961 3_1:+67696615 Msa0370170:CDS
AAAATATAGAACAACATCAT+AGG 0.485216 3_1:-67698697 None:intergenic
ATCGATGGAGTTTCGTTGGA+AGG 0.487661 3_1:+67696619 Msa0370170:CDS
GACAGGGATAGAGTCAAATC+TGG 0.491174 3_1:+67697902 Msa0370170:CDS
GTAATCTAGTTATTGATGGC+TGG 0.491561 3_1:-67695160 None:intergenic
AGGAGAGGAAAGTGTTGTGT+TGG 0.492228 3_1:-67695293 None:intergenic
CAAGAGCAGAGCGCATGGCT+CGG 0.492297 3_1:+67698607 Msa0370170:CDS
GAGATTATTATGAAGGTTGG+TGG 0.493359 3_1:+67695814 Msa0370170:CDS
GTTGTATCTACGAAGGTGAA+TGG 0.494101 3_1:+67695607 Msa0370170:CDS
CTTTCATCTCCTGGCAAAAG+TGG 0.494331 3_1:+67696930 Msa0370170:CDS
TCCTTCAAATCAAAATCACT+TGG 0.494789 3_1:-67696542 None:intergenic
ACTGTTTGATTAACAGGCTA+TGG 0.494837 3_1:+67699016 Msa0370170:three_prime_UTR
TGGACTAGGTTTCCTTCTGA+AGG 0.496639 3_1:+67696572 Msa0370170:CDS
GTATCGGTGTTGAATAGGAT+TGG 0.499415 3_1:+67696230 Msa0370170:CDS
CGAGTAAAGCTTTGGATCAA+CGG 0.499572 3_1:-67698811 None:intergenic
ACGGATCAGGAAAATACAAA+TGG 0.500009 3_1:+67695577 Msa0370170:CDS
CCGGCTGCTGAAGTGTGACC+GGG 0.500586 3_1:-67695439 None:intergenic
TTGGAAGGATTACTGCCCTA+TGG 0.500847 3_1:+67696634 Msa0370170:CDS
ATCCAAAGCTTTACTCGAAG+AGG 0.501514 3_1:+67698817 Msa0370170:CDS
TTACGACATCAGCAAGAAGC+TGG 0.503669 3_1:+67698743 Msa0370170:CDS
AAATGCGCGGATACTTTACT+TGG 0.507314 3_1:+67699293 Msa0370170:three_prime_UTR
TTGCTACCACCGGCCGTACC+CGG 0.507386 3_1:+67695421 Msa0370170:CDS
CGGCTGTGAGTCTGAGGAGG+AGG 0.510524 3_1:-67695394 None:intergenic
CCAACATAGCAACTTCCATC+AGG 0.514644 3_1:-67696014 None:intergenic
CAGCCGCCGGTTGCTACCAC+CGG 0.517037 3_1:+67695411 Msa0370170:CDS
AAGTCAAATCGTCTATGGAT+TGG 0.518884 3_1:-67697364 None:intergenic
AACGGTGTTATTAACGGAAG+AGG 0.520673 3_1:+67695909 Msa0370170:CDS
CTCCTCAGACTCACAGCCGC+CGG 0.521201 3_1:+67695398 Msa0370170:CDS
CTGATGGAAGTTGCTATGTT+GGG 0.522196 3_1:+67696015 Msa0370170:CDS
GGAATGAGTATATTGGTGAA+TGG 0.523321 3_1:+67695883 Msa0370170:CDS
TGTTTCATACTCGATGCTAC+CGG 0.523766 3_1:-67698875 None:intergenic
CCCGGTCACACTTCAGCAGC+CGG 0.523983 3_1:+67695439 Msa0370170:CDS
GGAAAGAAACGTTACGGTAA+CGG 0.525703 3_1:+67695792 Msa0370170:CDS
GATAATACTTGTGACAAAAT+GGG 0.528057 3_1:+67697692 Msa0370170:CDS
CCTGATGGAAGTTGCTATGT+TGG 0.529482 3_1:+67696014 Msa0370170:CDS
TTGAAGCAGAGCTACAAGAC+AGG 0.533588 3_1:+67697885 Msa0370170:CDS
GTTGGTAATAACAGAATGAA+AGG 0.533700 3_1:-67695275 None:intergenic
CTGAGGAGGAGGTGTTGTTG+TGG 0.534300 3_1:-67695383 None:intergenic
TTGTGGAAATGCTGCCCTCA+GGG 0.535698 3_1:+67696905 Msa0370170:CDS
CCCAACGGTGATTCTTACAT+GGG 0.537955 3_1:+67695528 Msa0370170:CDS
GAATCGTTATGAAGGTGAAT+GGG 0.538035 3_1:+67695953 Msa0370170:CDS
CATAGACGATTTGACTTGAA+GGG 0.539532 3_1:+67697370 Msa0370170:CDS
TGTATTTGTAGGCACTCTGT+TGG 0.540782 3_1:+67696488 Msa0370170:intron
GGTGTGTTTACTTGGCCTGA+TGG 0.542730 3_1:+67695999 Msa0370170:CDS
GGGAAAATGGTGTTCCGAAA+GGG 0.544352 3_1:+67695973 Msa0370170:CDS
TTGTAGGCACTCTGTTGGAA+AGG 0.546723 3_1:+67696493 Msa0370170:intron
ATAGCTAACATGTAATCAGC+AGG 0.548324 3_1:-67696882 None:intergenic
CCCTTACATATAGTTTCACC+CGG 0.553878 3_1:-67696332 None:intergenic
TCAACGGCTGAGATTGATGA+AGG 0.553947 3_1:-67698795 None:intergenic
ACAGACCCGGTTCATCGTGA+TGG 0.557962 3_1:+67697318 Msa0370170:intron
CTTCAGTCTTATCTGTCGTA+CGG 0.558988 3_1:-67697405 None:intergenic
CCATAATGATGGTTCACTGA+AGG 0.562321 3_1:+67699080 Msa0370170:three_prime_UTR
AAAATGGCTCATCCCAAGAC+TGG 0.564949 3_1:-67698652 None:intergenic
CCCATGTAAGAATCACCGTT+GGG 0.565218 3_1:-67695528 None:intergenic
AACCGGCGGCTGTGAGTCTG+AGG 0.565877 3_1:-67695400 None:intergenic
AGAGGTTTCGTGATTTCTTG+GGG 0.567121 3_1:+67698835 Msa0370170:CDS
GCCAGCAAGAGCAGAGCGCA+TGG 0.570278 3_1:+67698602 Msa0370170:CDS
TTTAAGTTAGGTAAAATGGA+AGG 0.570615 3_1:+67695696 Msa0370170:CDS
TTGCTGTGACAATGAGGAAG+AGG 0.570749 3_1:+67696114 Msa0370170:CDS
GACTTGAAGGGATCGTCACA+TGG 0.570790 3_1:+67697382 Msa0370170:CDS
CAGACCCGGTTCATCGTGAT+GGG 0.574346 3_1:+67697319 Msa0370170:intron
ATGATGGTTCACTGAAGGCA+AGG 0.575597 3_1:+67699085 Msa0370170:three_prime_UTR
GTGTGACCGGGTACGGCCGG+TGG 0.576629 3_1:-67695427 None:intergenic
TGGGAAAATGGTGTTCCGAA+AGG 0.578671 3_1:+67695972 Msa0370170:CDS
ATTTGTATTTGGGAATCTGA+TGG 0.583123 3_1:+67696170 Msa0370170:CDS
AACTCCATCGATTGATGTGG+TGG 0.584198 3_1:-67696608 None:intergenic
AATCTACACATCCCAACCAA+TGG 0.584960 3_1:-67699180 None:intergenic
TGATATTGTTGATAATGTAT+CGG 0.585855 3_1:+67696214 Msa0370170:CDS
ATTGAGGAAGCGATTTCAGG+TGG 0.589268 3_1:+67696857 Msa0370170:CDS
TTCACCCGGTCTCTTAACCT+CGG 0.590828 3_1:-67696318 None:intergenic
GAGCAGAGCGCATGGCTCGG+AGG 0.591132 3_1:+67698610 Msa0370170:CDS
TTGAATGGGAATCGTTATGA+AGG 0.597420 3_1:+67695945 Msa0370170:CDS
AATGGTGTTCCGAAAGGGCA+AGG 0.597645 3_1:+67695978 Msa0370170:CDS
TCCCATGTAAGAATCACCGT+TGG 0.598097 3_1:-67695529 None:intergenic
GAAGTGTGACCGGGTACGGC+CGG 0.598746 3_1:-67695430 None:intergenic
GCTTCCGAGGTTAAGAGACC+GGG 0.600548 3_1:+67696314 Msa0370170:CDS
ATTGTCCAGACAAATTGAGA+GGG 0.600968 3_1:+67697601 Msa0370170:intron
TGGAAGAAGAATGTTCAAGA+AGG 0.601723 3_1:+67695834 Msa0370170:CDS
CAAACCAATTGGAGGCCAGA+AGG 0.602903 3_1:+67697210 Msa0370170:CDS
GCATGCATACAAGTCACTGC+AGG 0.604105 3_1:+67698767 Msa0370170:CDS
GTAATCTTAGATCCTTCAGA+AGG 0.607853 3_1:-67696584 None:intergenic
CCGGGTGAAACTATATGTAA+GGG 0.608012 3_1:+67696332 Msa0370170:CDS
AATTGTCCAGACAAATTGAG+AGG 0.609484 3_1:+67697600 Msa0370170:intron
ATTGCCCATCACGATGAACC+GGG 0.610262 3_1:-67697323 None:intergenic
GGGATAGAGTCAAATCTGGC+CGG 0.612890 3_1:+67697906 Msa0370170:CDS
AGCTCAGAAAAGAAGCCAGA+AGG 0.612892 3_1:-67695135 None:intergenic
GGAGAATATTCAGTGAGGAC+CGG 0.614114 3_1:+67698856 Msa0370170:CDS
CCTTCAGGTTCTATTTACGA+AGG 0.614367 3_1:+67695669 Msa0370170:CDS
GGAAAATACAAATGGAACGA+TGG 0.614574 3_1:+67695585 Msa0370170:CDS
CGGCGGCTGTGAGTCTGAGG+AGG 0.616103 3_1:-67695397 None:intergenic
CATTGTGTCAAACCAATTGG+AGG 0.621598 3_1:+67697202 Msa0370170:CDS
CAGAGTGAAAAGTTTATGCG+TGG 0.622075 3_1:+67697851 Msa0370170:CDS
GTCACAGCAAAATCATCACC+AGG 0.624630 3_1:-67696101 None:intergenic
AGGAGATGAAAGCTCCCTGA+GGG 0.626112 3_1:-67696919 None:intergenic
CGGCCGGTGGTAGCAACCGG+CGG 0.627489 3_1:-67695414 None:intergenic
CCTTCGTAAATAGAACCTGA+AGG 0.628853 3_1:-67695669 None:intergenic
TATATTGGTGAATGGAAGAA+CGG 0.630785 3_1:+67695891 Msa0370170:CDS
TGATGGTTCACTGAAGGCAA+GGG 0.631854 3_1:+67699086 Msa0370170:three_prime_UTR
TACGCCACCACATCAATCGA+TGG 0.633033 3_1:+67696604 Msa0370170:CDS
CGAAACTCCATCGATTGATG+TGG 0.633841 3_1:-67696611 None:intergenic
TGATCTTTGTACATGAAAGA+TGG 0.636260 3_1:+67699109 Msa0370170:three_prime_UTR
GAAACACAAAATTGAGATCG+AGG 0.636698 3_1:-67697459 None:intergenic
GAGATCGAGGTCTTTGAGGG+TGG 0.639500 3_1:-67697446 None:intergenic
CGGGTGAAACTATATGTAAG+GGG 0.642189 3_1:+67696333 Msa0370170:CDS
AATGTTGTCATGAATCATGA+TGG 0.647937 3_1:+67698906 Msa0370170:three_prime_UTR
AAGAGATTAAGCAGTTTCGA+CGG 0.648335 3_1:+67696276 Msa0370170:CDS
TGAAGCAGAGCTACAAGACA+GGG 0.650372 3_1:+67697886 Msa0370170:CDS
ATGTTCAAGAAGGAAAAGGG+AGG 0.651936 3_1:+67695844 Msa0370170:CDS
TAGCATCGAGTATGAAACAA+AGG 0.652241 3_1:+67698879 Msa0370170:exon
ACCACTGTAAATATCTCCGT+CGG 0.657482 3_1:-67695739 None:intergenic
GGTTACGGAAAGAAACGTTA+CGG 0.659807 3_1:+67695786 Msa0370170:CDS
TAGGTCTCCCCAATGCGACA+AGG 0.659959 3_1:-67698678 None:intergenic
TCTTTGTACATGAAAGATGG+TGG 0.688843 3_1:+67699112 Msa0370170:three_prime_UTR
AACGATGGTTGTATCTACGA+AGG 0.690640 3_1:+67695600 Msa0370170:CDS
CTTGGGGAGAATATTCAGTG+AGG 0.694230 3_1:+67698851 Msa0370170:CDS
ACTTGTGACAAAATTCTATG+GGG 0.699706 3_1:+67697177 Msa0370170:CDS
GAAACCGGAATCCAAATGCG+CGG 0.700353 3_1:+67699280 Msa0370170:three_prime_UTR
CAGGAGATGAAAGCTCCCTG+AGG 0.700563 3_1:-67696920 None:intergenic
TCCGACGGAGATATTTACAG+TGG 0.708834 3_1:+67695738 Msa0370170:CDS
TGAAAGGAAATGAATCACTG+TGG 0.718371 3_1:-67695259 None:intergenic
TACGAAGGTGAATGGAAACG+AGG 0.723760 3_1:+67695615 Msa0370170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAAATTATTGCTATTTTAA+GGG + chr3_1:67697249-67697268 Msa0370170:intron 10.0%
!!! TTTAAGTTGATAAAATAATT+AGG + chr3_1:67697958-67697977 Msa0370170:intron 10.0%
!!! ATAATCAATGCATTTTTTTT+CGG - chr3_1:67695324-67695343 None:intergenic 15.0%
!!! GATAAATTATTGCTATTTTA+AGG + chr3_1:67697248-67697267 Msa0370170:intron 15.0%
!!! ATTATATTGTTTATCCTTTT+AGG + chr3_1:67697812-67697831 Msa0370170:intron 15.0%
!!! TTCTATAAAATGTTGATTTA+GGG - chr3_1:67698040-67698059 None:intergenic 15.0%
!!! ATTCTATAAAATGTTGATTT+AGG - chr3_1:67698041-67698060 None:intergenic 15.0%
!!! CAACATTTTATAGAATAATT+AGG + chr3_1:67698045-67698064 Msa0370170:intron 15.0%
!! ACATAAAAATATGAATGATT+AGG - chr3_1:67698227-67698246 None:intergenic 15.0%
!! TTATGAATGTAAAAAATGTT+AGG + chr3_1:67699232-67699251 Msa0370170:three_prime_UTR 15.0%
!!! TAATCAATGCATTTTTTTTC+GGG - chr3_1:67695323-67695342 None:intergenic 20.0%
!! TTTCAATCTTCTTTATTGAA+TGG + chr3_1:67696068-67696087 Msa0370170:CDS 20.0%
!! TTCAATCTTCTTTATTGAAT+GGG + chr3_1:67696069-67696088 Msa0370170:CDS 20.0%
!!! TGATATTGTTGATAATGTAT+CGG + chr3_1:67696214-67696233 Msa0370170:CDS 20.0%
!! CAATAATTTATCTTCAACAA+AGG - chr3_1:67697240-67697259 None:intergenic 20.0%
!! AAACAAGCAATCAATTAATT+AGG - chr3_1:67698361-67698380 None:intergenic 20.0%
!!! ATACCATCTCTATATTTTAT+TGG + chr3_1:67698397-67698416 Msa0370170:intron 20.0%
!!! TAAATTTTGATGTGTTAAGT+AGG + chr3_1:67698533-67698552 Msa0370170:intron 20.0%
!! AAAATATAGAACAACATCAT+AGG - chr3_1:67698700-67698719 None:intergenic 20.0%
!!! TATGATGTTGTTCTATATTT+TGG + chr3_1:67698699-67698718 Msa0370170:CDS 20.0%
!!! ATGATGTTGTTCTATATTTT+GGG + chr3_1:67698700-67698719 Msa0370170:CDS 20.0%
!! TAATATCATATTCTACTTTG+TGG - chr3_1:67699215-67699234 None:intergenic 20.0%
!! AATGTAAAAAATGTTAGGTA+GGG + chr3_1:67699237-67699256 Msa0370170:three_prime_UTR 20.0%
!! CTTTGGAGAAAAATAAAAGT+TGG - chr3_1:67695190-67695209 None:intergenic 25.0%
!! TTTAAGTTAGGTAAAATGGA+AGG + chr3_1:67695696-67695715 Msa0370170:CDS 25.0%
!!! ATTTTGGGAAGATTTGTATT+TGG + chr3_1:67696159-67696178 Msa0370170:CDS 25.0%
!!! TTTTGGGAAGATTTGTATTT+GGG + chr3_1:67696160-67696179 Msa0370170:CDS 25.0%
! TCTTATGCTTAATCTTCAAT+TGG + chr3_1:67696370-67696389 Msa0370170:CDS 25.0%
! CTTATGCTTAATCTTCAATT+GGG + chr3_1:67696371-67696390 Msa0370170:CDS 25.0%
! TTAATCTTCAATTGGGTATA+AGG + chr3_1:67696378-67696397 Msa0370170:CDS 25.0%
!! TTTGTAATTTGCATTAGTTC+CGG + chr3_1:67696444-67696463 Msa0370170:intron 25.0%
! AACCAAAAATTCCTTAAATC+CGG - chr3_1:67696466-67696485 None:intergenic 25.0%
!!! TTTTTGGTTTGTGTATTTGT+AGG + chr3_1:67696477-67696496 Msa0370170:intron 25.0%
!!! TTGATTTGAAGGAGAAATTT+TGG + chr3_1:67696552-67696571 Msa0370170:CDS 25.0%
! AATGATTAACATTAACTACC+AGG - chr3_1:67696688-67696707 None:intergenic 25.0%
! TTATTCTCCTTGTGTTAATT+AGG - chr3_1:67696813-67696832 None:intergenic 25.0%
!! TTTTGAATTTCAGACAATTG+AGG + chr3_1:67696841-67696860 Msa0370170:intron 25.0%
! CTAACTTATAGGTACTTATT+CGG + chr3_1:67697110-67697129 Msa0370170:intron 25.0%
!!! AATTATGGATTACAGTCTTT+TGG + chr3_1:67697649-67697668 Msa0370170:CDS 25.0%
! TGATAATACTTGTGACAAAA+TGG + chr3_1:67697691-67697710 Msa0370170:CDS 25.0%
! GATAATACTTGTGACAAAAT+GGG + chr3_1:67697692-67697711 Msa0370170:CDS 25.0%
!! TTTTATGTTGACGACATTAA+TGG + chr3_1:67698239-67698258 Msa0370170:intron 25.0%
! TTGAATTATCTTTAGCAAGT+AGG + chr3_1:67698279-67698298 Msa0370170:intron 25.0%
! ATTAATTGATTGCTTGTTTC+TGG + chr3_1:67698362-67698381 Msa0370170:intron 25.0%
! TTGCCAATAAAATATAGAGA+TGG - chr3_1:67698403-67698422 None:intergenic 25.0%
! CTTTATAAATGCTGAAGTAT+AGG - chr3_1:67698437-67698456 None:intergenic 25.0%
! CAGCATTTATAAAGTAGTTA+TGG + chr3_1:67698443-67698462 Msa0370170:intron 25.0%
! TATAAAGTAGTTATGGTTGT+TGG + chr3_1:67698450-67698469 Msa0370170:intron 25.0%
! AATTGATCTGAATAATATCC+AGG + chr3_1:67698942-67698961 Msa0370170:three_prime_UTR 25.0%
!!! GCATTGATAATCTTTTTCTA+TGG + chr3_1:67699038-67699057 Msa0370170:three_prime_UTR 25.0%
! ATGGCAAAATCTTCAAAATT+TGG - chr3_1:67699064-67699083 None:intergenic 25.0%
!!! TTTTTTTTCTGTCTTTCCAT+TGG + chr3_1:67699164-67699183 Msa0370170:three_prime_UTR 25.0%
! GAATGTAAAAAATGTTAGGT+AGG + chr3_1:67699236-67699255 Msa0370170:three_prime_UTR 25.0%
! ATGTAAAAAATGTTAGGTAG+GGG + chr3_1:67699238-67699257 Msa0370170:three_prime_UTR 25.0%
!! ATGAAAATGTTTTCAGAAAC+CGG + chr3_1:67699265-67699284 Msa0370170:three_prime_UTR 25.0%
TGGAGTAATCTAGTTATTGA+TGG - chr3_1:67695167-67695186 None:intergenic 30.0%
TGGAGAAAAATAAAAGTTGG+TGG - chr3_1:67695187-67695206 None:intergenic 30.0%
!! GTTGGTAATAACAGAATGAA+AGG - chr3_1:67695278-67695297 None:intergenic 30.0%
AATTCGATTGTTATGCTTGT+TGG - chr3_1:67695474-67695493 None:intergenic 30.0%
! CGAGTTTAAGTTAGGTAAAA+TGG + chr3_1:67695692-67695711 Msa0370170:CDS 30.0%
AAGAATGTTCAAGAAGGAAA+AGG + chr3_1:67695840-67695859 Msa0370170:CDS 30.0%
AGAATGTTCAAGAAGGAAAA+GGG + chr3_1:67695841-67695860 Msa0370170:CDS 30.0%
AAAAACGGGAATGAGTATAT+TGG + chr3_1:67695876-67695895 Msa0370170:CDS 30.0%
TATATTGGTGAATGGAAGAA+CGG + chr3_1:67695891-67695910 Msa0370170:CDS 30.0%
ATTTGTATTTGGGAATCTGA+TGG + chr3_1:67696170-67696189 Msa0370170:CDS 30.0%
!! ATAATGTATCGGTGTTGAAT+AGG + chr3_1:67696225-67696244 Msa0370170:CDS 30.0%
! TTCCGGATTTAAGGAATTTT+TGG + chr3_1:67696461-67696480 Msa0370170:intron 30.0%
!!! ACCAAGTGATTTTGATTTGA+AGG + chr3_1:67696541-67696560 Msa0370170:CDS 30.0%
TCCTTCAAATCAAAATCACT+TGG - chr3_1:67696545-67696564 None:intergenic 30.0%
AGTTTCGTTCTTTACATTTC+TGG + chr3_1:67696783-67696802 Msa0370170:intron 30.0%
ACACAAGGAGAATAATGTTA+TGG + chr3_1:67696818-67696837 Msa0370170:intron 30.0%
GATTACATGTTAGCTATTTG+TGG + chr3_1:67696888-67696907 Msa0370170:CDS 30.0%
GATCATAAATCTGTCATCTT+GGG - chr3_1:67696973-67696992 None:intergenic 30.0%
TGATCATAAATCTGTCATCT+TGG - chr3_1:67696974-67696993 None:intergenic 30.0%
!! GAGTTTTGTGACTAACTTAT+AGG + chr3_1:67697099-67697118 Msa0370170:intron 30.0%
TCACTTGTGACAAAATTCTA+TGG + chr3_1:67697175-67697194 Msa0370170:CDS 30.0%
CACTTGTGACAAAATTCTAT+GGG + chr3_1:67697176-67697195 Msa0370170:CDS 30.0%
ACTTGTGACAAAATTCTATG+GGG + chr3_1:67697177-67697196 Msa0370170:CDS 30.0%
!! TTGTTATTTAAACACAGACC+CGG + chr3_1:67697305-67697324 Msa0370170:intron 30.0%
TTGTCTGGACAATTATATCA+AGG - chr3_1:67697594-67697613 None:intergenic 30.0%
CAGAACATATTTCAACTTAC+CGG - chr3_1:67697928-67697947 None:intergenic 30.0%
TGTATCATTGTGTTCCTTAA+AGG + chr3_1:67698092-67698111 Msa0370170:intron 30.0%
AATTATCTTTAGCAAGTAGG+TGG + chr3_1:67698282-67698301 Msa0370170:intron 30.0%
ATTATCTTTAGCAAGTAGGT+GGG + chr3_1:67698283-67698302 Msa0370170:intron 30.0%
!! AGTAGGATTTTTCTTGTTTC+AGG + chr3_1:67698550-67698569 Msa0370170:intron 30.0%
! GTTTCAGGAAATCATTGATT+AGG + chr3_1:67698565-67698584 Msa0370170:intron 30.0%
! AGGAAATCATTGATTAGGTT+AGG + chr3_1:67698570-67698589 Msa0370170:intron 30.0%
AATGTTGTCATGAATCATGA+TGG + chr3_1:67698906-67698925 Msa0370170:three_prime_UTR 30.0%
AAGAAAGCTCGAAATTGATT+CGG + chr3_1:67698966-67698985 Msa0370170:three_prime_UTR 30.0%
CAATAGACTGTTTGATTAAC+AGG + chr3_1:67699010-67699029 Msa0370170:three_prime_UTR 30.0%
! TGAAGATTTTGCCATAATGA+TGG + chr3_1:67699069-67699088 Msa0370170:three_prime_UTR 30.0%
TGATCTTTGTACATGAAAGA+TGG + chr3_1:67699109-67699128 Msa0370170:three_prime_UTR 30.0%
!!! GAAAGTGTACAGTTCTTTTT+TGG + chr3_1:67699323-67699342 Msa0370170:three_prime_UTR 30.0%
!! TAGTGATTGGTGCTATTTAC+TGG - chr3_1:67695075-67695094 None:intergenic 35.0%
! GTAATCTAGTTATTGATGGC+TGG - chr3_1:67695163-67695182 None:intergenic 35.0%
!! GTTCTGCTTTGTTTCTACTT+TGG - chr3_1:67695207-67695226 None:intergenic 35.0%
TGAAAGGAAATGAATCACTG+TGG - chr3_1:67695262-67695281 None:intergenic 35.0%
!!! GTGATTGACGCATTTTTTGA+AGG - chr3_1:67695353-67695372 None:intergenic 35.0%
TCTTACATGGGAACTTTCTT+CGG + chr3_1:67695540-67695559 Msa0370170:CDS 35.0%
! TTGTATTTTCCTGATCCGTT+TGG - chr3_1:67695576-67695595 None:intergenic 35.0%
ACGGATCAGGAAAATACAAA+TGG + chr3_1:67695577-67695596 Msa0370170:CDS 35.0%
GGAAAATACAAATGGAACGA+TGG + chr3_1:67695585-67695604 Msa0370170:CDS 35.0%
! CCACGAAAATTTTCCATTTC+CGG - chr3_1:67695649-67695668 None:intergenic 35.0%
TTAGGTAAAATGGAAGGTTC+TGG + chr3_1:67695702-67695721 Msa0370170:CDS 35.0%
GAGATATTTACAGTGGTTCA+TGG + chr3_1:67695745-67695764 Msa0370170:CDS 35.0%
TGGAGTTCCGATAGAAAAAA+CGG + chr3_1:67695765-67695784 Msa0370170:CDS 35.0%
TCCGATAGAAAAAACGGTTA+CGG + chr3_1:67695771-67695790 Msa0370170:CDS 35.0%
!!! TCCGTAACCGTTTTTTCTAT+CGG - chr3_1:67695775-67695794 None:intergenic 35.0%
!! GGTAACGGAGATTATTATGA+AGG + chr3_1:67695807-67695826 Msa0370170:CDS 35.0%
ACGGAGATTATTATGAAGGT+TGG + chr3_1:67695811-67695830 Msa0370170:CDS 35.0%
GAGATTATTATGAAGGTTGG+TGG + chr3_1:67695814-67695833 Msa0370170:CDS 35.0%
TGGAAGAAGAATGTTCAAGA+AGG + chr3_1:67695834-67695853 Msa0370170:CDS 35.0%
GGAATGAGTATATTGGTGAA+TGG + chr3_1:67695883-67695902 Msa0370170:CDS 35.0%
!! TGGAAGAACGGTGTTATTAA+CGG + chr3_1:67695903-67695922 Msa0370170:CDS 35.0%
TTGAATGGGAATCGTTATGA+AGG + chr3_1:67695945-67695964 Msa0370170:CDS 35.0%
GAATCGTTATGAAGGTGAAT+GGG + chr3_1:67695953-67695972 Msa0370170:CDS 35.0%
TATGAAGGTGAATGGGAAAA+TGG + chr3_1:67695960-67695979 Msa0370170:CDS 35.0%
! TTGAATGGGAGTTTTTATCC+TGG + chr3_1:67696083-67696102 Msa0370170:CDS 35.0%
!! ATGATTTTGCTGTGACAATG+AGG + chr3_1:67696108-67696127 Msa0370170:CDS 35.0%
! TTGAAGGTGGAAAGGATTTT+GGG + chr3_1:67696144-67696163 Msa0370170:CDS 35.0%
CGAAACTGCTTAATCTCTTT+CGG - chr3_1:67696275-67696294 None:intergenic 35.0%
AAGAGATTAAGCAGTTTCGA+CGG + chr3_1:67696276-67696295 Msa0370170:CDS 35.0%
TTGCATTAGTTCCGGATTTA+AGG + chr3_1:67696452-67696471 Msa0370170:intron 35.0%
! TGAAGGAGAAATTTTGGACT+AGG + chr3_1:67696558-67696577 Msa0370170:CDS 35.0%
GTAATCTTAGATCCTTCAGA+AGG - chr3_1:67696587-67696606 None:intergenic 35.0%
! ATTACTGCCCTATGGTTTTT+AGG + chr3_1:67696642-67696661 Msa0370170:CDS 35.0%
GGCTATACCTAAAAACCATA+GGG - chr3_1:67696652-67696671 None:intergenic 35.0%
AGGCTATACCTAAAAACCAT+AGG - chr3_1:67696653-67696672 None:intergenic 35.0%
!!! TAGCCTTTTTGTTTTTCACC+TGG + chr3_1:67696667-67696686 Msa0370170:intron 35.0%
CTACCAGGTGAAAAACAAAA+AGG - chr3_1:67696673-67696692 None:intergenic 35.0%
CATTTCTTTAGCACTCACAT+AGG + chr3_1:67696704-67696723 Msa0370170:intron 35.0%
ATAGCTAACATGTAATCAGC+AGG - chr3_1:67696885-67696904 None:intergenic 35.0%
AGTGAAAAAATCCGAAGTCA+AGG + chr3_1:67696998-67697017 Msa0370170:CDS 35.0%
CCAAAAACAAACCTTGACTT+CGG - chr3_1:67697012-67697031 None:intergenic 35.0%
! CATACTAGTTTGAACGAACA+CGG - chr3_1:67697057-67697076 None:intergenic 35.0%
CGAACATGTTTCTCAATATG+AGG + chr3_1:67697150-67697169 Msa0370170:CDS 35.0%
GTACATTGTGTCAAACCAAT+TGG + chr3_1:67697199-67697218 Msa0370170:CDS 35.0%
AAGTCAAATCGTCTATGGAT+TGG - chr3_1:67697367-67697386 None:intergenic 35.0%
!! CATAGACGATTTGACTTGAA+GGG + chr3_1:67697370-67697389 Msa0370170:CDS 35.0%
GAAACACAAAATTGAGATCG+AGG - chr3_1:67697462-67697481 None:intergenic 35.0%
CTTTGAACCAATTTCTTTGC+AGG - chr3_1:67697486-67697505 None:intergenic 35.0%
AATTGTCCAGACAAATTGAG+AGG + chr3_1:67697600-67697619 Msa0370170:intron 35.0%
ATTGTCCAGACAAATTGAGA+GGG + chr3_1:67697601-67697620 Msa0370170:intron 35.0%
TTTGGAAGCTGAAGGAATTA+TGG + chr3_1:67697634-67697653 Msa0370170:CDS 35.0%
!! ATGGATTACAGTCTTTTGGT+CGG + chr3_1:67697653-67697672 Msa0370170:CDS 35.0%
CATCTACAATATGCACAGAA+AGG - chr3_1:67697760-67697779 None:intergenic 35.0%
AAGAGTCATGCTTTCCTAAA+AGG - chr3_1:67697829-67697848 None:intergenic 35.0%
! CGGTAAGTTGAAATATGTTC+TGG + chr3_1:67697926-67697945 Msa0370170:intron 35.0%
ACCACATCCATAGTTTAAGT+GGG + chr3_1:67697998-67698017 Msa0370170:intron 35.0%
GTAACTACCCACTTAAACTA+TGG - chr3_1:67698008-67698027 None:intergenic 35.0%
TCTATCACTGTGTTCCATAA+AGG + chr3_1:67698133-67698152 Msa0370170:intron 35.0%
TACAACATCTCACTCCTTTA+TGG - chr3_1:67698150-67698169 None:intergenic 35.0%
ATAAAGGAGTGAGATGTTGT+AGG + chr3_1:67698149-67698168 Msa0370170:intron 35.0%
! ATTTTACTCCTTGTCGCATT+GGG + chr3_1:67698670-67698689 Msa0370170:CDS 35.0%
AAGAGGTTTCGTGATTTCTT+GGG + chr3_1:67698834-67698853 Msa0370170:CDS 35.0%
! TAGCATCGAGTATGAAACAA+AGG + chr3_1:67698879-67698898 Msa0370170:exon 35.0%
! AGAAAGCTCGAAATTGATTC+GGG + chr3_1:67698967-67698986 Msa0370170:three_prime_UTR 35.0%
ACTGTTTGATTAACAGGCTA+TGG + chr3_1:67699016-67699035 Msa0370170:three_prime_UTR 35.0%
TCTTTGTACATGAAAGATGG+TGG + chr3_1:67699112-67699131 Msa0370170:three_prime_UTR 35.0%
! TTTTCTGTCTTTCCATTGGT+TGG + chr3_1:67699168-67699187 Msa0370170:three_prime_UTR 35.0%
! TTTCTGTCTTTCCATTGGTT+GGG + chr3_1:67699169-67699188 Msa0370170:three_prime_UTR 35.0%
!!! TGCATTTTTTTTCGGGCAAG+AGG - chr3_1:67695316-67695335 None:intergenic 40.0%
!! TGCTTGTTGGTGAGATTTTC+CGG - chr3_1:67695461-67695480 None:intergenic 40.0%
!! ATGCTTTTTGGCGGTTCTTT+TGG - chr3_1:67695505-67695524 None:intergenic 40.0%
!! GTTGGGTAAATGCTTTTTGG+CGG - chr3_1:67695514-67695533 None:intergenic 40.0%
!! GCCAAAAAGCATTTACCCAA+CGG + chr3_1:67695513-67695532 Msa0370170:CDS 40.0%
! ACCGTTGGGTAAATGCTTTT+TGG - chr3_1:67695517-67695536 None:intergenic 40.0%
AACGATGGTTGTATCTACGA+AGG + chr3_1:67695600-67695619 Msa0370170:CDS 40.0%
GTTGTATCTACGAAGGTGAA+TGG + chr3_1:67695607-67695626 Msa0370170:CDS 40.0%
! CCGGAAATGGAAAATTTTCG+TGG + chr3_1:67695646-67695665 Msa0370170:CDS 40.0%
CCTTCGTAAATAGAACCTGA+AGG - chr3_1:67695672-67695691 None:intergenic 40.0%
! CCTTCAGGTTCTATTTACGA+AGG + chr3_1:67695669-67695688 Msa0370170:CDS 40.0%
! TACGAAGGCGAGTTTAAGTT+AGG + chr3_1:67695684-67695703 Msa0370170:CDS 40.0%
!!! GAAGGTTCTGGAACTTTTAC+TGG + chr3_1:67695714-67695733 Msa0370170:CDS 40.0%
ACCACTGTAAATATCTCCGT+CGG - chr3_1:67695742-67695761 None:intergenic 40.0%
GGTTACGGAAAGAAACGTTA+CGG + chr3_1:67695786-67695805 Msa0370170:CDS 40.0%
GGAAAGAAACGTTACGGTAA+CGG + chr3_1:67695792-67695811 Msa0370170:CDS 40.0%
ATGTTCAAGAAGGAAAAGGG+AGG + chr3_1:67695844-67695863 Msa0370170:CDS 40.0%
! AAGGAAAAGGGAGGTATGTT+TGG + chr3_1:67695853-67695872 Msa0370170:CDS 40.0%
! GGGAGGTATGTTTGGAAAAA+CGG + chr3_1:67695861-67695880 Msa0370170:CDS 40.0%
! GGAGGTATGTTTGGAAAAAC+GGG + chr3_1:67695862-67695881 Msa0370170:CDS 40.0%
!! AACGGTGTTATTAACGGAAG+AGG + chr3_1:67695909-67695928 Msa0370170:CDS 40.0%
GAACGCTTGTTTGGTTGAAT+GGG + chr3_1:67695931-67695950 Msa0370170:CDS 40.0%
GGAATCGTTATGAAGGTGAA+TGG + chr3_1:67695952-67695971 Msa0370170:CDS 40.0%
CTGATGGAAGTTGCTATGTT+GGG + chr3_1:67696015-67696034 Msa0370170:CDS 40.0%
GAAGTTGCTATGTTGGGAAT+TGG + chr3_1:67696021-67696040 Msa0370170:CDS 40.0%
!!! AGGAAGAGGTGTTTTGTTGA+AGG + chr3_1:67696128-67696147 Msa0370170:CDS 40.0%
!!! AAGAGGTGTTTTGTTGAAGG+TGG + chr3_1:67696131-67696150 Msa0370170:CDS 40.0%
!! GTGTTTTGTTGAAGGTGGAA+AGG + chr3_1:67696136-67696155 Msa0370170:CDS 40.0%
! GTTGAAGGTGGAAAGGATTT+TGG + chr3_1:67696143-67696162 Msa0370170:CDS 40.0%
! TGGGAATCTGATGGTGAAAA+AGG + chr3_1:67696179-67696198 Msa0370170:CDS 40.0%
!! GTATCGGTGTTGAATAGGAT+TGG + chr3_1:67696230-67696249 Msa0370170:CDS 40.0%
ACCGGGTGAAACTATATGTA+AGG + chr3_1:67696331-67696350 Msa0370170:CDS 40.0%
CCCTTACATATAGTTTCACC+CGG - chr3_1:67696335-67696354 None:intergenic 40.0%
CCGGGTGAAACTATATGTAA+GGG + chr3_1:67696332-67696351 Msa0370170:CDS 40.0%
CGGGTGAAACTATATGTAAG+GGG + chr3_1:67696333-67696352 Msa0370170:CDS 40.0%
TGTATTTGTAGGCACTCTGT+TGG + chr3_1:67696488-67696507 Msa0370170:intron 40.0%
ATCAATCGATGGAGTTTCGT+TGG + chr3_1:67696615-67696634 Msa0370170:CDS 40.0%
! GCAACATTTGATTTCGTCGA+AGG + chr3_1:67696726-67696745 Msa0370170:intron 40.0%
TGGTCAGCCTAATTAACACA+AGG + chr3_1:67696803-67696822 Msa0370170:intron 40.0%
ACAATTGAGGAAGCGATTTC+AGG + chr3_1:67696854-67696873 Msa0370170:CDS 40.0%
!! CCGAAGTCAAGGTTTGTTTT+TGG + chr3_1:67697009-67697028 Msa0370170:intron 40.0%
CATTGTGTCAAACCAATTGG+AGG + chr3_1:67697202-67697221 Msa0370170:CDS 40.0%
! TTCAACAAAGGCATACCTTC+TGG - chr3_1:67697228-67697247 None:intergenic 40.0%
!!! GATGGGCAATCTTTTTTGCT+CGG + chr3_1:67697336-67697355 Msa0370170:CDS 40.0%
CCTTCAAGTCAAATCGTCTA+TGG - chr3_1:67697372-67697391 None:intergenic 40.0%
!! CCATAGACGATTTGACTTGA+AGG + chr3_1:67697369-67697388 Msa0370170:CDS 40.0%
! CTTCAGTCTTATCTGTCGTA+CGG - chr3_1:67697408-67697427 None:intergenic 40.0%
ATTGAGATCGAGGTCTTTGA+GGG - chr3_1:67697452-67697471 None:intergenic 40.0%
AATTGAGATCGAGGTCTTTG+AGG - chr3_1:67697453-67697472 None:intergenic 40.0%
TGTTTCGCCTGCAAAGAAAT+TGG + chr3_1:67697476-67697495 Msa0370170:CDS 40.0%
ACAATCCCTCTCAATTTGTC+TGG - chr3_1:67697609-67697628 None:intergenic 40.0%
!!! TCACCATTTTTTTTGCGCAC+TGG + chr3_1:67697719-67697738 Msa0370170:CDS 40.0%
GTACCAGTGCGCAAAAAAAA+TGG - chr3_1:67697725-67697744 None:intergenic 40.0%
CAGAGTGAAAAGTTTATGCG+TGG + chr3_1:67697851-67697870 Msa0370170:CDS 40.0%
CACCACATCCATAGTTTAAG+TGG + chr3_1:67697997-67698016 Msa0370170:intron 40.0%
ACCCACTTAAACTATGGATG+TGG - chr3_1:67698002-67698021 None:intergenic 40.0%
TACAGCATCTCACTCCTTTA+AGG - chr3_1:67698109-67698128 None:intergenic 40.0%
TTAAAGGAGTGAGATGCTGT+AGG + chr3_1:67698108-67698127 Msa0370170:intron 40.0%
TAGGTGGGAATAATGTAGAG+CGG + chr3_1:67698298-67698317 Msa0370170:intron 40.0%
GAATAATGTAGAGCGGGAAA+CGG + chr3_1:67698305-67698324 Msa0370170:intron 40.0%
ATTAATTAGGACCACGACCT+GGG - chr3_1:67698348-67698367 None:intergenic 40.0%
AATTAATTAGGACCACGACC+TGG - chr3_1:67698349-67698368 None:intergenic 40.0%
TTTGACCAATACACCAGTCT+TGG + chr3_1:67698639-67698658 Msa0370170:CDS 40.0%
TTGACCAATACACCAGTCTT+GGG + chr3_1:67698640-67698659 Msa0370170:CDS 40.0%
CAATGCGACAAGGAGTAAAA+TGG - chr3_1:67698671-67698690 None:intergenic 40.0%
! CATTTTACTCCTTGTCGCAT+TGG + chr3_1:67698669-67698688 Msa0370170:CDS 40.0%
! TTTTACTCCTTGTCGCATTG+GGG + chr3_1:67698671-67698690 Msa0370170:CDS 40.0%
!! CGAGTAAAGCTTTGGATCAA+CGG - chr3_1:67698814-67698833 None:intergenic 40.0%
ATCCAAAGCTTTACTCGAAG+AGG + chr3_1:67698817-67698836 Msa0370170:CDS 40.0%
AACCTCTTCGAGTAAAGCTT+TGG - chr3_1:67698822-67698841 None:intergenic 40.0%
GAAGAGGTTTCGTGATTTCT+TGG + chr3_1:67698833-67698852 Msa0370170:CDS 40.0%
AGAGGTTTCGTGATTTCTTG+GGG + chr3_1:67698835-67698854 Msa0370170:CDS 40.0%
TGTTTCATACTCGATGCTAC+CGG - chr3_1:67698878-67698897 None:intergenic 40.0%
CAATTTCGAGCTTTCTTTCC+TGG - chr3_1:67698963-67698982 None:intergenic 40.0%
!! ATTGATTCGGGTGTTGGAAT+TGG + chr3_1:67698979-67698998 Msa0370170:three_prime_UTR 40.0%
CCTTCAGTGAACCATCATTA+TGG - chr3_1:67699083-67699102 None:intergenic 40.0%
CCATAATGATGGTTCACTGA+AGG + chr3_1:67699080-67699099 Msa0370170:three_prime_UTR 40.0%
AATCTACACATCCCAACCAA+TGG - chr3_1:67699183-67699202 None:intergenic 40.0%
GTTGGGATGTGTAGATTCTT+TGG + chr3_1:67699186-67699205 Msa0370170:three_prime_UTR 40.0%
! AAGTAAAGTATCCGCGCATT+TGG - chr3_1:67699294-67699313 None:intergenic 40.0%
AAATGCGCGGATACTTTACT+TGG + chr3_1:67699293-67699312 Msa0370170:three_prime_UTR 40.0%
! AGAGAGAGGTGCATAGTGAT+TGG - chr3_1:67695088-67695107 None:intergenic 45.0%
CTCTCTCTCTCATATCCTTC+TGG + chr3_1:67695120-67695139 Msa0370170:five_prime_UTR 45.0%
AGCTCAGAAAAGAAGCCAGA+AGG - chr3_1:67695138-67695157 None:intergenic 45.0%
!! AGGAGAGGAAAGTGTTGTGT+TGG - chr3_1:67695296-67695315 None:intergenic 45.0%
!!! TTTTTTTCGGGCAAGAGGAG+AGG - chr3_1:67695311-67695330 None:intergenic 45.0%
ACCCAACGGTGATTCTTACA+TGG + chr3_1:67695527-67695546 Msa0370170:CDS 45.0%
CCCATGTAAGAATCACCGTT+GGG - chr3_1:67695531-67695550 None:intergenic 45.0%
CCCAACGGTGATTCTTACAT+GGG + chr3_1:67695528-67695547 Msa0370170:CDS 45.0%
TCCCATGTAAGAATCACCGT+TGG - chr3_1:67695532-67695551 None:intergenic 45.0%
TTCGGCAACAACACACCAAA+CGG + chr3_1:67695558-67695577 Msa0370170:CDS 45.0%
AACAACACACCAAACGGATC+AGG + chr3_1:67695564-67695583 Msa0370170:CDS 45.0%
TACGAAGGTGAATGGAAACG+AGG + chr3_1:67695615-67695634 Msa0370170:CDS 45.0%
TGGAAACGAGGAAAAGCTTC+CGG + chr3_1:67695627-67695646 Msa0370170:CDS 45.0%
! GGAAAATTTTCGTGGCCTTC+AGG + chr3_1:67695654-67695673 Msa0370170:CDS 45.0%
! GGAACTTTTACTGGATCCGA+CGG + chr3_1:67695723-67695742 Msa0370170:CDS 45.0%
TCCGACGGAGATATTTACAG+TGG + chr3_1:67695738-67695757 Msa0370170:CDS 45.0%
GGAACGCTTGTTTGGTTGAA+TGG + chr3_1:67695930-67695949 Msa0370170:CDS 45.0%
TGGGAAAATGGTGTTCCGAA+AGG + chr3_1:67695972-67695991 Msa0370170:CDS 45.0%
GGGAAAATGGTGTTCCGAAA+GGG + chr3_1:67695973-67695992 Msa0370170:CDS 45.0%
GTAAACACACCTTGCCCTTT+CGG - chr3_1:67695990-67696009 None:intergenic 45.0%
AAGGGCAAGGTGTGTTTACT+TGG + chr3_1:67695991-67696010 Msa0370170:CDS 45.0%
CCAACATAGCAACTTCCATC+AGG - chr3_1:67696017-67696036 None:intergenic 45.0%
CCTGATGGAAGTTGCTATGT+TGG + chr3_1:67696014-67696033 Msa0370170:CDS 45.0%
GTCACAGCAAAATCATCACC+AGG - chr3_1:67696104-67696123 None:intergenic 45.0%
TTGCTGTGACAATGAGGAAG+AGG + chr3_1:67696114-67696133 Msa0370170:CDS 45.0%
AAGCAGTTTCGACGGAATTC+TGG + chr3_1:67696284-67696303 Msa0370170:CDS 45.0%
!! TTCTGGTTGTTTTGCTTCCG+AGG + chr3_1:67696301-67696320 Msa0370170:CDS 45.0%
TTGTAGGCACTCTGTTGGAA+AGG + chr3_1:67696493-67696512 Msa0370170:intron 45.0%
! TGGACTAGGTTTCCTTCTGA+AGG + chr3_1:67696572-67696591 Msa0370170:CDS 45.0%
! AACTCCATCGATTGATGTGG+TGG - chr3_1:67696611-67696630 None:intergenic 45.0%
! CGAAACTCCATCGATTGATG+TGG - chr3_1:67696614-67696633 None:intergenic 45.0%
ATCGATGGAGTTTCGTTGGA+AGG + chr3_1:67696619-67696638 Msa0370170:CDS 45.0%
TTGGAAGGATTACTGCCCTA+TGG + chr3_1:67696634-67696653 Msa0370170:CDS 45.0%
ATTGAGGAAGCGATTTCAGG+TGG + chr3_1:67696857-67696876 Msa0370170:CDS 45.0%
CTTTCATCTCCTGGCAAAAG+TGG + chr3_1:67696930-67696949 Msa0370170:CDS 45.0%
!! AAGAAGCTTCCACTTTTGCC+AGG - chr3_1:67696942-67696961 None:intergenic 45.0%
GGGTTTAGTCTACGATTTGC+AGG + chr3_1:67697269-67697288 Msa0370170:intron 45.0%
! TGAGAGGGATTGTGCGTTTT+TGG + chr3_1:67697616-67697635 Msa0370170:CDS 45.0%
!! TGTGCGTTTTTGGAAGCTGA+AGG + chr3_1:67697626-67697645 Msa0370170:CDS 45.0%
! TGTCTTGTAGCTCTGCTTCA+AGG - chr3_1:67697886-67697905 None:intergenic 45.0%
TTGAAGCAGAGCTACAAGAC+AGG + chr3_1:67697885-67697904 Msa0370170:CDS 45.0%
TGAAGCAGAGCTACAAGACA+GGG + chr3_1:67697886-67697905 Msa0370170:CDS 45.0%
GACAGGGATAGAGTCAAATC+TGG + chr3_1:67697902-67697921 Msa0370170:CDS 45.0%
TGATACAAGCCTCTCTTCTC+AGG - chr3_1:67698079-67698098 None:intergenic 45.0%
AGGTGGGAATAATGTAGAGC+GGG + chr3_1:67698299-67698318 Msa0370170:intron 45.0%
TGCATAGCTGCAACTCTGTT+TGG + chr3_1:67698486-67698505 Msa0370170:intron 45.0%
GCATAGCTGCAACTCTGTTT+GGG + chr3_1:67698487-67698506 Msa0370170:intron 45.0%
TGCAACTCTGTTTGGGAGTA+AGG + chr3_1:67698494-67698513 Msa0370170:intron 45.0%
TCATCCCAAGACTGGTGTAT+TGG - chr3_1:67698647-67698666 None:intergenic 45.0%
AAAATGGCTCATCCCAAGAC+TGG - chr3_1:67698655-67698674 None:intergenic 45.0%
TTACGACATCAGCAAGAAGC+TGG + chr3_1:67698743-67698762 Msa0370170:CDS 45.0%
TCAACGGCTGAGATTGATGA+AGG - chr3_1:67698798-67698817 None:intergenic 45.0%
CTTGGGGAGAATATTCAGTG+AGG + chr3_1:67698851-67698870 Msa0370170:CDS 45.0%
GGAGAATATTCAGTGAGGAC+CGG + chr3_1:67698856-67698875 Msa0370170:CDS 45.0%
!! CTCGAAATTGATTCGGGTGT+TGG + chr3_1:67698973-67698992 Msa0370170:three_prime_UTR 45.0%
ATGATGGTTCACTGAAGGCA+AGG + chr3_1:67699085-67699104 Msa0370170:three_prime_UTR 45.0%
TGATGGTTCACTGAAGGCAA+GGG + chr3_1:67699086-67699105 Msa0370170:three_prime_UTR 45.0%
!! AAAAAAAAAAGAAAAAAAAA+AGG - chr3_1:67699150-67699169 None:intergenic 5.0%
AGAGAGAGAGAGAGAGAGAG+AGG - chr3_1:67695100-67695119 None:intergenic 50.0%
CGAGGAAAAGCTTCCGGAAA+TGG + chr3_1:67695633-67695652 Msa0370170:CDS 50.0%
ACGGAAGAGGAACGCTTGTT+TGG + chr3_1:67695922-67695941 Msa0370170:CDS 50.0%
AATGGTGTTCCGAAAGGGCA+AGG + chr3_1:67695978-67695997 Msa0370170:CDS 50.0%
GGTGTGTTTACTTGGCCTGA+TGG + chr3_1:67695999-67696018 Msa0370170:CDS 50.0%
TGCTTCCGAGGTTAAGAGAC+CGG + chr3_1:67696313-67696332 Msa0370170:CDS 50.0%
TTCACCCGGTCTCTTAACCT+CGG - chr3_1:67696321-67696340 None:intergenic 50.0%
TACGCCACCACATCAATCGA+TGG + chr3_1:67696604-67696623 Msa0370170:CDS 50.0%
TTTGTGGAAATGCTGCCCTC+AGG + chr3_1:67696904-67696923 Msa0370170:CDS 50.0%
TTGTGGAAATGCTGCCCTCA+GGG + chr3_1:67696905-67696924 Msa0370170:CDS 50.0%
AGGAGATGAAAGCTCCCTGA+GGG - chr3_1:67696922-67696941 None:intergenic 50.0%
CAAACCAATTGGAGGCCAGA+AGG + chr3_1:67697210-67697229 Msa0370170:CDS 50.0%
CATACCTTCTGGCCTCCAAT+TGG - chr3_1:67697217-67697236 None:intergenic 50.0%
ATTGCCCATCACGATGAACC+GGG - chr3_1:67697326-67697345 None:intergenic 50.0%
GATTGCCCATCACGATGAAC+CGG - chr3_1:67697327-67697346 None:intergenic 50.0%
GACTTGAAGGGATCGTCACA+TGG + chr3_1:67697382-67697401 Msa0370170:CDS 50.0%
GGGATAGAGTCAAATCTGGC+CGG + chr3_1:67697906-67697925 Msa0370170:CDS 50.0%
GTCGAAGAACCTGAGAAGAG+AGG + chr3_1:67698067-67698086 Msa0370170:intron 50.0%
AGCGGGAAACGGTTGTTTGT+GGG + chr3_1:67698316-67698335 Msa0370170:intron 50.0%
GCATGCATACAAGTCACTGC+AGG + chr3_1:67698767-67698786 Msa0370170:CDS 50.0%
GAAACCGGAATCCAAATGCG+CGG + chr3_1:67699280-67699299 Msa0370170:three_prime_UTR 50.0%
GTATCCGCGCATTTGGATTC+CGG - chr3_1:67699287-67699306 None:intergenic 50.0%
!! CTGAGGAGGAGGTGTTGTTG+TGG - chr3_1:67695386-67695405 None:intergenic 55.0%
TGCTGAAGTGTGACCGGGTA+CGG - chr3_1:67695437-67695456 None:intergenic 55.0%
GCTTCCGAGGTTAAGAGACC+GGG + chr3_1:67696314-67696333 Msa0370170:CDS 55.0%
CAGGAGATGAAAGCTCCCTG+AGG - chr3_1:67696923-67696942 None:intergenic 55.0%
CTCAGGGAGCTTTCATCTCC+TGG + chr3_1:67696921-67696940 Msa0370170:CDS 55.0%
ACAGACCCGGTTCATCGTGA+TGG + chr3_1:67697318-67697337 Msa0370170:intron 55.0%
CAGACCCGGTTCATCGTGAT+GGG + chr3_1:67697319-67697338 Msa0370170:intron 55.0%
! GAGATCGAGGTCTTTGAGGG+TGG - chr3_1:67697449-67697468 None:intergenic 55.0%
GAGCGGGAAACGGTTGTTTG+TGG + chr3_1:67698315-67698334 Msa0370170:intron 55.0%
GCGGGAAACGGTTGTTTGTG+GGG + chr3_1:67698317-67698336 Msa0370170:intron 55.0%
CGGGAAACGGTTGTTTGTGG+GGG + chr3_1:67698318-67698337 Msa0370170:intron 55.0%
! TTGTTTGTGGGGGCATACCC+AGG + chr3_1:67698328-67698347 Msa0370170:intron 55.0%
TAGGTCTCCCCAATGCGACA+AGG - chr3_1:67698681-67698700 None:intergenic 55.0%
TCCGGCTGCTGAAGTGTGAC+CGG - chr3_1:67695443-67695462 None:intergenic 60.0%
CAAGAGCAGAGCGCATGGCT+CGG + chr3_1:67698607-67698626 Msa0370170:CDS 60.0%
CGGCTGTGAGTCTGAGGAGG+AGG - chr3_1:67695397-67695416 None:intergenic 65.0%
CTCCTCAGACTCACAGCCGC+CGG + chr3_1:67695398-67695417 Msa0370170:CDS 65.0%
AACCGGCGGCTGTGAGTCTG+AGG - chr3_1:67695403-67695422 None:intergenic 65.0%
GTACGGCCGGTGGTAGCAAC+CGG - chr3_1:67695420-67695439 None:intergenic 65.0%
TTGCTACCACCGGCCGTACC+CGG + chr3_1:67695421-67695440 Msa0370170:CDS 65.0%
GAAGTGTGACCGGGTACGGC+CGG - chr3_1:67695433-67695452 None:intergenic 65.0%
CCGGCTGCTGAAGTGTGACC+GGG - chr3_1:67695442-67695461 None:intergenic 65.0%
CCCGGTCACACTTCAGCAGC+CGG + chr3_1:67695439-67695458 Msa0370170:CDS 65.0%
GCCAGCAAGAGCAGAGCGCA+TGG + chr3_1:67698602-67698621 Msa0370170:CDS 65.0%
GCCATGCGCTCTGCTCTTGC+TGG - chr3_1:67698606-67698625 None:intergenic 65.0%
CGGCGGCTGTGAGTCTGAGG+AGG - chr3_1:67695400-67695419 None:intergenic 70.0%
! CAGCCGCCGGTTGCTACCAC+CGG + chr3_1:67695411-67695430 Msa0370170:CDS 70.0%
! GTGGGGGCATACCCAGGTCG+TGG + chr3_1:67698334-67698353 Msa0370170:intron 70.0%
! GAGCAGAGCGCATGGCTCGG+AGG + chr3_1:67698610-67698629 Msa0370170:CDS 70.0%
CGGCCGGTGGTAGCAACCGG+CGG - chr3_1:67695417-67695436 None:intergenic 75.0%
GTGTGACCGGGTACGGCCGG+TGG - chr3_1:67695430-67695449 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 67695060 67699363 67695060 ID=Msa0370170;Name=Msa0370170
chr3_1 mRNA 67695060 67699363 67695060 ID=Msa0370170-mRNA-1;Parent=Msa0370170;Name=Msa0370170-mRNA-1;_AED=0.07;_eAED=0.07;_QI=300|1|1|1|1|1|8|482|736
chr3_1 exon 67695060 67696399 67695060 ID=Msa0370170-mRNA-1:exon:14036;Parent=Msa0370170-mRNA-1
chr3_1 exon 67696499 67696663 67696499 ID=Msa0370170-mRNA-1:exon:14037;Parent=Msa0370170-mRNA-1
chr3_1 exon 67696854 67697019 67696854 ID=Msa0370170-mRNA-1:exon:14038;Parent=Msa0370170-mRNA-1
chr3_1 exon 67697121 67697231 67697121 ID=Msa0370170-mRNA-1:exon:14039;Parent=Msa0370170-mRNA-1
chr3_1 exon 67697322 67697515 67697322 ID=Msa0370170-mRNA-1:exon:14040;Parent=Msa0370170-mRNA-1
chr3_1 exon 67697610 67697740 67697610 ID=Msa0370170-mRNA-1:exon:14041;Parent=Msa0370170-mRNA-1
chr3_1 exon 67697834 67697927 67697834 ID=Msa0370170-mRNA-1:exon:14042;Parent=Msa0370170-mRNA-1
chr3_1 exon 67698572 67699363 67698572 ID=Msa0370170-mRNA-1:exon:14043;Parent=Msa0370170-mRNA-1
chr3_1 five_prime_UTR 67695060 67695359 67695060 ID=Msa0370170-mRNA-1:five_prime_utr;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67695360 67696399 67695360 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67696499 67696663 67696499 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67696854 67697019 67696854 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67697121 67697231 67697121 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67697322 67697515 67697322 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67697610 67697740 67697610 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67697834 67697927 67697834 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 CDS 67698572 67698881 67698572 ID=Msa0370170-mRNA-1:cds;Parent=Msa0370170-mRNA-1
chr3_1 three_prime_UTR 67698882 67699363 67698882 ID=Msa0370170-mRNA-1:three_prime_utr;Parent=Msa0370170-mRNA-1
Gene Sequence

>Msa0370170

ATGCGTCAATCACTTCTCTCTAACCACAACAACACCTCCTCCTCAGACTCACAGCCGCCGGTTGCTACCACCGGCCGTACCCGGTCACACTTCAGCAGCCGGAAAATCTCACCAACAAGCATAACAATCGAATTCGAAAAAACCAAAAGAACCGCCAAAAAGCATTTACCCAACGGTGATTCTTACATGGGAACTTTCTTCGGCAACAACACACCAAACGGATCAGGAAAATACAAATGGAACGATGGTTGTATCTACGAAGGTGAATGGAAACGAGGAAAAGCTTCCGGAAATGGAAAATTTTCGTGGCCTTCAGGTTCTATTTACGAAGGCGAGTTTAAGTTAGGTAAAATGGAAGGTTCTGGAACTTTTACTGGATCCGACGGAGATATTTACAGTGGTTCATGGAGTTCCGATAGAAAAAACGGTTACGGAAAGAAACGTTACGGTAACGGAGATTATTATGAAGGTTGGTGGAAGAAGAATGTTCAAGAAGGAAAAGGGAGGTATGTTTGGAAAAACGGGAATGAGTATATTGGTGAATGGAAGAACGGTGTTATTAACGGAAGAGGAACGCTTGTTTGGTTGAATGGGAATCGTTATGAAGGTGAATGGGAAAATGGTGTTCCGAAAGGGCAAGGTGTGTTTACTTGGCCTGATGGAAGTTGCTATGTTGGGAATTGGAATAATAATAGTAATAATAATGATTTTCAATCTTCTTTATTGAATGGGAGTTTTTATCCTGGTGATGATTTTGCTGTGACAATGAGGAAGAGGTGTTTTGTTGAAGGTGGAAAGGATTTTGGGAAGATTTGTATTTGGGAATCTGATGGTGAAAAAGGTGATATAACTTGTGATATTGTTGATAATGTATCGGTGTTGAATAGGATTGGAAGTGAAAGTGTCTCAGATCCGAAAGAGATTAAGCAGTTTCGACGGAATTCTGGTTGTTTTGCTTCCGAGGTTAAGAGACCGGGTGAAACTATATGTAAGGGGCATAAGAATTATGATCTTATGCTTAATCTTCAATTGGGTATAAGGCACTCTGTTGGAAAGGAAGCTTCTATATCGAGAGAGCTAATACCAAGTGATTTTGATTTGAAGGAGAAATTTTGGACTAGGTTTCCTTCTGAAGGATCTAAGATTACGCCACCACATCAATCGATGGAGTTTCGTTGGAAGGATTACTGCCCTATGGTTTTTAGACAATTGAGGAAGCGATTTCAGGTGGATCCTGCTGATTACATGTTAGCTATTTGTGGAAATGCTGCCCTCAGGGAGCTTTCATCTCCTGGCAAAAGTGGAAGCTTCTTCTACTTGACCCAAGATGACAGATTTATGATCAAGACAGTGAAAAAATCCGAAGTCAAGGTACTTATTCGGATGCTTCGAAGTTATTACGAACATGTTTCTCAATATGAGGATTCACTTGTGACAAAATTCTATGGGGTACATTGTGTCAAACCAATTGGAGGCCAGAAGACCCGGTTCATCGTGATGGGCAATCTTTTTTGCTCGGAATATCCAATCCATAGACGATTTGACTTGAAGGGATCGTCACATGGCCGTACGACAGATAAGACTGAAGATGAAATTGATGAAACTACCACCCTCAAAGACCTCGATCTCAATTTTGTGTTTCGCCTGCAAAGAAATTGGTTCAAAGATCTCATCACACAAATTGAGAGGGATTGTGCGTTTTTGGAAGCTGAAGGAATTATGGATTACAGTCTTTTGGTCGGCGTTCATTTTCGTGATGATAATACTTGTGACAAAATGGGATTATCACCATTTTTTTTGCGCACTGGAAAGCATGACTCTTATCAGAGTGAAAAGTTTATGCGTGGTTATCGCTTCCTTGAAGCAGAGCTACAAGACAGGGATAGAGTCAAATCTGGCCGGAAATCATTGATTAGGTTAGGAGCAAATATGCCAGCAAGAGCAGAGCGCATGGCTCGGAGGAGTGATTTTGACCAATACACCAGTCTTGGGATGAGCCATTTTACTCCTTGTCGCATTGGGGAGACCTATGATGTTGTTCTATATTTTGGGATTATAGACATTTTGCAAGATTACGACATCAGCAAGAAGCTGGAGCATGCATACAAGTCACTGCAGGTTGATCCTTCATCAATCTCAGCCGTTGATCCAAAGCTTTACTCGAAGAGGTTTCGTGATTTCTTGGGGAGAATATTCAGTGAGGACCGGTAG
Protein sequence

>Msa0370170

MRQSLLSNHNNTSSSDSQPPVATTGRTRSHFSSRKISPTSITIEFEKTKRTAKKHLPNGDSYMGTFFGNNTPNGSGKYKWNDGCIYEGEWKRGKASGNGKFSWPSGSIYEGEFKLGKMEGSGTFTGSDGDIYSGSWSSDRKNGYGKKRYGNGDYYEGWWKKNVQEGKGRYVWKNGNEYIGEWKNGVINGRGTLVWLNGNRYEGEWENGVPKGQGVFTWPDGSCYVGNWNNNSNNNDFQSSLLNGSFYPGDDFAVTMRKRCFVEGGKDFGKICIWESDGEKGDITCDIVDNVSVLNRIGSESVSDPKEIKQFRRNSGCFASEVKRPGETICKGHKNYDLMLNLQLGIRHSVGKEASISRELIPSDFDLKEKFWTRFPSEGSKITPPHQSMEFRWKDYCPMVFRQLRKRFQVDPADYMLAICGNAALRELSSPGKSGSFFYLTQDDRFMIKTVKKSEVKVLIRMLRSYYEHVSQYEDSLVTKFYGVHCVKPIGGQKTRFIVMGNLFCSEYPIHRRFDLKGSSHGRTTDKTEDEIDETTTLKDLDLNFVFRLQRNWFKDLITQIERDCAFLEAEGIMDYSLLVGVHFRDDNTCDKMGLSPFFLRTGKHDSYQSEKFMRGYRFLEAELQDRDRVKSGRKSLIRLGANMPARAERMARRSDFDQYTSLGMSHFTPCRIGETYDVVLYFGIIDILQDYDISKKLEHAYKSLQVDPSSISAVDPKLYSKRFRDFLGRIFSEDR*