Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0437700 | XP_003601106.1 | 98.229 | 734 | 11 | 1 | 1 | 734 | 1 | 732 | 0.0 | 1492 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0437700 | sp|Q8L796|PI5K2_ARATH | 70.914 | 722 | 183 | 6 | 22 | 733 | 49 | 753 | 0.0 | 1041 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0437700 | G7J3M3 | 98.229 | 734 | 11 | 1 | 1 | 734 | 1 | 732 | 0.0 | 1492 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0021300 | Msa0437700 | 0.806219 | 9.147558e-50 | -8.615850e-47 |
Msa0023150 | Msa0437700 | 0.809266 | 2.059982e-50 | -8.615850e-47 |
Msa0034320 | Msa0437700 | 0.808097 | 3.662110e-50 | -8.615850e-47 |
Msa0035090 | Msa0437700 | 0.810040 | 1.404589e-50 | -8.615850e-47 |
Msa0060350 | Msa0437700 | 0.802088 | 6.623423e-49 | -8.615850e-47 |
Msa0065390 | Msa0437700 | 0.809043 | 2.299968e-50 | -8.615850e-47 |
Msa0070990 | Msa0437700 | 0.842683 | 2.225775e-58 | -8.615850e-47 |
Msa0081300 | Msa0437700 | 0.806020 | 1.007584e-49 | -8.615850e-47 |
Msa0092660 | Msa0437700 | 0.800134 | 1.661685e-48 | -8.615850e-47 |
Msa0095140 | Msa0437700 | 0.821454 | 4.003247e-53 | -8.615850e-47 |
Msa0095270 | Msa0437700 | 0.821485 | 3.938881e-53 | -8.615850e-47 |
Msa0110710 | Msa0437700 | 0.807995 | 3.849337e-50 | -8.615850e-47 |
Msa0119000 | Msa0437700 | 0.815184 | 1.052583e-51 | -8.615850e-47 |
Msa0125230 | Msa0437700 | 0.811851 | 5.692902e-51 | -8.615850e-47 |
Msa0126760 | Msa0437700 | 0.806765 | 7.016079e-50 | -8.615850e-47 |
Msa0130120 | Msa0437700 | 0.801460 | 8.909020e-49 | -8.615850e-47 |
Msa0134550 | Msa0437700 | 0.804867 | 1.757730e-49 | -8.615850e-47 |
Msa0139740 | Msa0437700 | 0.812976 | 3.233164e-51 | -8.615850e-47 |
Msa0143490 | Msa0437700 | 0.811156 | 8.058469e-51 | -8.615850e-47 |
Msa0143970 | Msa0437700 | 0.814233 | 1.710349e-51 | -8.615850e-47 |
Msa0143980 | Msa0437700 | 0.806071 | 9.826913e-50 | -8.615850e-47 |
Msa0157020 | Msa0437700 | 0.814250 | 1.695632e-51 | -8.615850e-47 |
Msa0162330 | Msa0437700 | 0.804584 | 2.013672e-49 | -8.615850e-47 |
Msa0172660 | Msa0437700 | 0.813457 | 2.535538e-51 | -8.615850e-47 |
Msa0173610 | Msa0437700 | 0.808624 | 2.826110e-50 | -8.615850e-47 |
Msa0175280 | Msa0437700 | 0.807669 | 4.515899e-50 | -8.615850e-47 |
Msa0175900 | Msa0437700 | 0.813143 | 2.971062e-51 | -8.615850e-47 |
Msa0185550 | Msa0437700 | 0.814741 | 1.319871e-51 | -8.615850e-47 |
Msa0190000 | Msa0437700 | 0.809816 | 1.569655e-50 | -8.615850e-47 |
Msa0206970 | Msa0437700 | 0.804439 | 2.159641e-49 | -8.615850e-47 |
Msa0222070 | Msa0437700 | 0.821930 | 3.106806e-53 | -8.615850e-47 |
Msa0222120 | Msa0437700 | 0.821189 | 4.609337e-53 | -8.615850e-47 |
Msa0224960 | Msa0437700 | 0.816307 | 5.916272e-52 | -8.615850e-47 |
Msa0225010 | Msa0437700 | 0.810724 | 9.998794e-51 | -8.615850e-47 |
Msa0227290 | Msa0437700 | 0.816823 | 4.532536e-52 | -8.615850e-47 |
Msa0365150 | Msa0437700 | 0.817671 | 2.922116e-52 | -8.615850e-47 |
Msa0370170 | Msa0437700 | 0.867776 | 1.066469e-65 | -8.615850e-47 |
Msa0380420 | Msa0437700 | 0.814671 | 1.368213e-51 | -8.615850e-47 |
Msa0383670 | Msa0437700 | 0.816044 | 6.774465e-52 | -8.615850e-47 |
Msa0399180 | Msa0437700 | 0.801036 | 1.088022e-48 | -8.615850e-47 |
Msa0415460 | Msa0437700 | 0.824470 | 7.934511e-54 | -8.615850e-47 |
Msa0415930 | Msa0437700 | 0.808409 | 3.141935e-50 | -8.615850e-47 |
Msa0417150 | Msa0437700 | 0.819476 | 1.138610e-52 | -8.615850e-47 |
Msa0417630 | Msa0437700 | 0.807409 | 5.127134e-50 | -8.615850e-47 |
Msa0421800 | Msa0437700 | 0.812375 | 4.376185e-51 | -8.615850e-47 |
Msa0423110 | Msa0437700 | 0.811791 | 5.868245e-51 | -8.615850e-47 |
Msa0427050 | Msa0437700 | 0.829320 | 5.499756e-55 | -8.615850e-47 |
Msa0434630 | Msa0437700 | 0.806231 | 9.093765e-50 | -8.615850e-47 |
Msa0437700 | Msa0466830 | 0.802578 | 5.250402e-49 | -8.615850e-47 |
Msa0437700 | Msa0467880 | 0.800833 | 1.197276e-48 | -8.615850e-47 |
Msa0437700 | Msa0473450 | 0.825973 | 3.499340e-54 | -8.615850e-47 |
Msa0437700 | Msa0476150 | 0.817894 | 2.602466e-52 | -8.615850e-47 |
Msa0437700 | Msa0476180 | 0.811182 | 7.955480e-51 | -8.615850e-47 |
Msa0437700 | Msa0482020 | 0.844114 | 9.240293e-59 | -8.615850e-47 |
Msa0437700 | Msa0486860 | 0.807571 | 4.735772e-50 | -8.615850e-47 |
Msa0437700 | Msa0509960 | 0.997324 | 1.515271e-240 | -8.615850e-47 |
Msa0437700 | Msa0514260 | 0.814779 | 1.294672e-51 | -8.615850e-47 |
Msa0437700 | Msa0530210 | 0.801891 | 7.268800e-49 | -8.615850e-47 |
Msa0437700 | Msa0547050 | 0.825337 | 4.954073e-54 | -8.615850e-47 |
Msa0437700 | Msa0550720 | 0.802804 | 4.715933e-49 | -8.615850e-47 |
Msa0437700 | Msa0558890 | 0.802186 | 6.322625e-49 | -8.615850e-47 |
Msa0437700 | Msa0568490 | 0.812784 | 3.561115e-51 | -8.615850e-47 |
Msa0437700 | Msa0575450 | 0.801532 | 8.613277e-49 | -8.615850e-47 |
Msa0437700 | Msa0577350 | 0.800949 | 1.133691e-48 | -8.615850e-47 |
Msa0437700 | Msa0601780 | 0.820012 | 8.589563e-53 | -8.615850e-47 |
Msa0437700 | Msa0606140 | 0.847870 | 8.797969e-60 | -8.615850e-47 |
Msa0437700 | Msa0619060 | 0.810092 | 1.369044e-50 | -8.615850e-47 |
Msa0437700 | Msa0624240 | 0.814356 | 1.606663e-51 | -8.615850e-47 |
Msa0437700 | Msa0647110 | 0.814300 | 1.652416e-51 | -8.615850e-47 |
Msa0437700 | Msa0659040 | 0.820456 | 6.795100e-53 | -8.615850e-47 |
Msa0437700 | Msa0662270 | 0.819664 | 1.031269e-52 | -8.615850e-47 |
Msa0437700 | Msa0690720 | 0.801909 | 7.209343e-49 | -8.615850e-47 |
Msa0437700 | Msa0702120 | 0.802194 | 6.298746e-49 | -8.615850e-47 |
Msa0437700 | Msa0703720 | 0.816000 | 6.929116e-52 | -8.615850e-47 |
Msa0437700 | Msa0703760 | 0.804136 | 2.496258e-49 | -8.615850e-47 |
Msa0437700 | Msa0704570 | 0.810832 | 9.475862e-51 | -8.615850e-47 |
Msa0437700 | Msa0704990 | 0.835502 | 1.616241e-56 | -8.615850e-47 |
Msa0437700 | Msa0705030 | 0.837684 | 4.493938e-57 | -8.615850e-47 |
Msa0437700 | Msa0709480 | 0.807627 | 4.609193e-50 | -8.615850e-47 |
Msa0437700 | Msa0716670 | 0.802570 | 5.269275e-49 | -8.615850e-47 |
Msa0437700 | Msa0720380 | 0.811039 | 8.546516e-51 | -8.615850e-47 |
Msa0437700 | Msa0733570 | 0.815710 | 8.041344e-52 | -8.615850e-47 |
Msa0437700 | Msa0739570 | 0.804393 | 2.207267e-49 | -8.615850e-47 |
Msa0437700 | Msa0766880 | 0.824874 | 6.371283e-54 | -8.615850e-47 |
Msa0437700 | Msa0772210 | 0.814397 | 1.573308e-51 | -8.615850e-47 |
Msa0437700 | Msa0774680 | 0.824286 | 8.765823e-54 | -8.615850e-47 |
Msa0437700 | Msa0782330 | 0.806730 | 7.138646e-50 | -8.615850e-47 |
Msa0437700 | Msa0804930 | 0.800044 | 1.733509e-48 | -8.615850e-47 |
Msa0437700 | Msa0814760 | 0.812437 | 4.242427e-51 | -8.615850e-47 |
Msa0437700 | Msa0821490 | 0.811987 | 5.316429e-51 | -8.615850e-47 |
Msa0437700 | Msa0840570 | 0.806009 | 1.012707e-49 | -8.615850e-47 |
Msa0437700 | Msa0851870 | 0.814137 | 1.795293e-51 | -8.615850e-47 |
Msa0437700 | Msa0860270 | 0.812511 | 4.087129e-51 | -8.615850e-47 |
Msa0437700 | Msa0900320 | 0.817966 | 2.507079e-52 | -8.615850e-47 |
Msa0437700 | Msa0910650 | 0.850660 | 1.471171e-60 | -8.615850e-47 |
Msa0437700 | Msa0930160 | 0.847335 | 1.234290e-59 | -8.615850e-47 |
Msa0437700 | Msa0945560 | 0.815990 | 6.962554e-52 | -8.615850e-47 |
Msa0437700 | Msa0946650 | 0.805024 | 1.629520e-49 | -8.615850e-47 |
Msa0437700 | Msa0959970 | 0.808611 | 2.844396e-50 | -8.615850e-47 |
Msa0437700 | Msa1002980 | 0.809204 | 2.124372e-50 | -8.615850e-47 |
Msa0437700 | Msa1024580 | 0.816318 | 5.881834e-52 | -8.615850e-47 |
Msa0437700 | Msa1029320 | 0.801589 | 8.383785e-49 | -8.615850e-47 |
Msa0437700 | Msa1040770 | 0.823804 | 1.137156e-53 | -8.615850e-47 |
Msa0437700 | Msa1049440 | 0.851973 | 6.259116e-61 | -8.615850e-47 |
Msa0437700 | Msa1067430 | 0.806018 | 1.008199e-49 | -8.615850e-47 |
Msa0437700 | Msa1070900 | 0.801391 | 9.205965e-49 | -8.615850e-47 |
Msa0437700 | Msa1072080 | 0.800062 | 1.718481e-48 | -8.615850e-47 |
Msa0437700 | Msa1074630 | 0.812232 | 4.702125e-51 | -8.615850e-47 |
Msa0437700 | Msa1081850 | 0.815894 | 7.315943e-52 | -8.615850e-47 |
Msa0437700 | Msa1086630 | 0.800092 | 1.694723e-48 | -8.615850e-47 |
Msa0437700 | Msa1090230 | 0.856006 | 4.306619e-62 | -8.615850e-47 |
Msa0437700 | Msa1108530 | 0.806953 | 6.403602e-50 | -8.615850e-47 |
Msa0437700 | Msa1111670 | 0.827037 | 1.951143e-54 | -8.615850e-47 |
Msa0437700 | Msa1123340 | 0.846644 | 1.907993e-59 | -8.615850e-47 |
Msa0437700 | Msa1126910 | 0.814742 | 1.319180e-51 | -8.615850e-47 |
Msa0437700 | Msa1128350 | 0.815985 | 6.983228e-52 | -8.615850e-47 |
Msa0437700 | Msa1152280 | 0.808235 | 3.421523e-50 | -8.615850e-47 |
Msa0437700 | Msa1157160 | 0.831641 | 1.487701e-55 | -8.615850e-47 |
Msa0437700 | Msa1166180 | 0.822317 | 2.527034e-53 | -8.615850e-47 |
Msa0437700 | Msa1166280 | 0.820050 | 8.417094e-53 | -8.615850e-47 |
Msa0437700 | Msa1181380 | 0.811479 | 6.857284e-51 | -8.615850e-47 |
Msa0437700 | Msa1183610 | 0.802774 | 4.782479e-49 | -8.615850e-47 |
Msa0437700 | Msa1207280 | 0.804592 | 2.006452e-49 | -8.615850e-47 |
Msa0437700 | Msa1209390 | 0.841994 | 3.389996e-58 | -8.615850e-47 |
Msa0437700 | Msa1209650 | 0.811656 | 6.278081e-51 | -8.615850e-47 |
Msa0437700 | Msa1213540 | 0.817575 | 3.070997e-52 | -8.615850e-47 |
Msa0437700 | Msa1214220 | 0.815522 | 8.853701e-52 | -8.615850e-47 |
Msa0437700 | Msa1214900 | 0.806725 | 7.156344e-50 | -8.615850e-47 |
Msa0437700 | Msa1215210 | 0.826168 | 3.144691e-54 | -8.615850e-47 |
Msa0437700 | Msa1252040 | 0.803254 | 3.805914e-49 | -8.615850e-47 |
Msa0437700 | Msa1293530 | 0.814246 | 1.698340e-51 | -8.615850e-47 |
Msa0437700 | Msa1298740 | 0.816034 | 6.808752e-52 | -8.615850e-47 |
Msa0437700 | Msa1310300 | 0.817585 | 3.054978e-52 | -8.615850e-47 |
Msa0437700 | Msa1325980 | 0.802905 | 4.494703e-49 | -8.615850e-47 |
Msa0437700 | Msa1327820 | 0.801142 | 1.035170e-48 | -8.615850e-47 |
Msa0437700 | Msa1354850 | 0.812821 | 3.496038e-51 | -8.615850e-47 |
Msa0437700 | Msa1356200 | 0.809131 | 2.202336e-50 | -8.615850e-47 |
Msa0437700 | Msa1364520 | 0.811827 | 5.761798e-51 | -8.615850e-47 |
Msa0437700 | Msa1372560 | 0.854653 | 1.066318e-61 | -8.615850e-47 |
Msa0437700 | Msa1373340 | 0.805208 | 1.491468e-49 | -8.615850e-47 |
Msa0437700 | Msa1375630 | 0.817268 | 3.601497e-52 | -8.615850e-47 |
Msa0437700 | Msa1376530 | 0.819434 | 1.163730e-52 | -8.615850e-47 |
Msa0437700 | Msa1385940 | 0.828519 | 8.595935e-55 | -8.615850e-47 |
Msa0437700 | Msa1390410 | 0.800814 | 1.207956e-48 | -8.615850e-47 |
Msa0437700 | Msa1394090 | 0.807018 | 6.203120e-50 | -8.615850e-47 |
Msa0437700 | Msa1398740 | 0.808313 | 3.292788e-50 | -8.615850e-47 |
Msa0437700 | Msa1406230 | 0.812291 | 4.564082e-51 | -8.615850e-47 |
Msa0437700 | Msa1406550 | 0.800760 | 1.238877e-48 | -8.615850e-47 |
Msa0437700 | Msa1410170 | 0.817157 | 3.814255e-52 | -8.615850e-47 |
Msa0437700 | Msa1413220 | 0.837297 | 5.648304e-57 | -8.615850e-47 |
Msa0437700 | Msa1415120 | 0.817974 | 2.495606e-52 | -8.615850e-47 |
Msa0437700 | Msa1415250 | 0.803551 | 3.302669e-49 | -8.615850e-47 |
Msa0437700 | Msa1416460 | 0.815054 | 1.125298e-51 | -8.615850e-47 |
Msa0437700 | Msa1422490 | 0.804244 | 2.370458e-49 | -8.615850e-47 |
Msa0437700 | Msa1426870 | 0.818850 | 1.580649e-52 | -8.615850e-47 |
Msa0437700 | Msa1432470 | 0.825336 | 4.955160e-54 | -8.615850e-47 |
Msa0437700 | Msa1435470 | 0.808296 | 3.321498e-50 | -8.615850e-47 |
Msa0437700 | Msa1435980 | 0.813817 | 2.112347e-51 | -8.615850e-47 |
Msa0437700 | Msa1437320 | 0.803753 | 2.999522e-49 | -8.615850e-47 |
Msa0437700 | Msa1439800 | 0.811412 | 7.093859e-51 | -8.615850e-47 |
Msa0437700 | Msa1449680 | 0.806340 | 8.628264e-50 | -8.615850e-47 |
Msa0437700 | Msa1458330 | 0.805918 | 1.058608e-49 | -8.615850e-47 |
Msa0263620 | Msa0437700 | 0.823168 | 1.601690e-53 | -8.615850e-47 |
Msa0268180 | Msa0437700 | 0.819376 | 1.199954e-52 | -8.615850e-47 |
Msa0268220 | Msa0437700 | 0.800084 | 1.701495e-48 | -8.615850e-47 |
Msa0268420 | Msa0437700 | 0.822105 | 2.830660e-53 | -8.615850e-47 |
Msa0268460 | Msa0437700 | 0.800783 | 1.225839e-48 | -8.615850e-47 |
Msa0268540 | Msa0437700 | 0.810217 | 1.286425e-50 | -8.615850e-47 |
Msa0268930 | Msa0437700 | 0.803899 | 2.796992e-49 | -8.615850e-47 |
Msa0269060 | Msa0437700 | 0.800472 | 1.418246e-48 | -8.615850e-47 |
Msa0280140 | Msa0437700 | 0.816390 | 5.668284e-52 | -8.615850e-47 |
Msa0284260 | Msa0437700 | 0.807798 | 4.239210e-50 | -8.615850e-47 |
Msa0292150 | Msa0437700 | 0.803158 | 3.983465e-49 | -8.615850e-47 |
Msa0296000 | Msa0437700 | 0.804546 | 2.050847e-49 | -8.615850e-47 |
Msa0301460 | Msa0437700 | 0.826399 | 2.771767e-54 | -8.615850e-47 |
Msa0304870 | Msa0437700 | 0.808991 | 2.359506e-50 | -8.615850e-47 |
Msa0306130 | Msa0437700 | 0.814862 | 1.241352e-51 | -8.615850e-47 |
Msa0308430 | Msa0437700 | 0.810996 | 8.731044e-51 | -8.615850e-47 |
Msa0324060 | Msa0437700 | 0.841716 | 4.012787e-58 | -8.615850e-47 |
Msa0333900 | Msa0437700 | 0.812525 | 4.057359e-51 | -8.615850e-47 |
Msa0334020 | Msa0437700 | 0.810905 | 9.135185e-51 | -8.615850e-47 |
Msa0338900 | Msa0437700 | 0.820025 | 8.530371e-53 | -8.615850e-47 |
Msa0341260 | Msa0437700 | 0.809187 | 2.141606e-50 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0437700 | MtrunA17_Chr3g0115111 | 98.229 | 734 | 11 | 1 | 1 | 734 | 1 | 732 | 0.0 | 1492 |
Msa0437700 | MtrunA17_Chr5g0424301 | 74.176 | 728 | 156 | 6 | 15 | 733 | 28 | 732 | 0.0 | 1092 |
Msa0437700 | MtrunA17_Chr3g0131001 | 61.497 | 748 | 231 | 11 | 1 | 734 | 1 | 705 | 0.0 | 868 |
Msa0437700 | MtrunA17_Chr8g0385201 | 59.494 | 711 | 219 | 10 | 38 | 734 | 12 | 667 | 0.0 | 827 |
Msa0437700 | MtrunA17_Chr3g0082501 | 53.186 | 722 | 278 | 14 | 52 | 733 | 59 | 760 | 0.0 | 692 |
Msa0437700 | MtrunA17_Chr8g0353121 | 50.811 | 740 | 300 | 12 | 37 | 733 | 32 | 750 | 0.0 | 685 |
Msa0437700 | MtrunA17_Chr1g0171491 | 49.202 | 752 | 298 | 11 | 52 | 733 | 56 | 793 | 0.0 | 662 |
Msa0437700 | MtrunA17_Chr1g0180261 | 41.657 | 845 | 339 | 18 | 15 | 733 | 2 | 818 | 0.0 | 571 |
Msa0437700 | MtrunA17_Chr8g0380791 | 38.697 | 783 | 367 | 18 | 45 | 732 | 1 | 765 | 6.94e-174 | 517 |
Msa0437700 | MtrunA17_Chr7g0256301 | 61.244 | 418 | 135 | 8 | 321 | 733 | 396 | 791 | 7.55e-168 | 503 |
Msa0437700 | MtrunA17_Chr7g0256301 | 54.271 | 199 | 89 | 2 | 51 | 249 | 65 | 261 | 1.30e-62 | 224 |
Msa0437700 | MtrunA17_Chr4g0059911 | 36.441 | 236 | 133 | 6 | 44 | 273 | 40 | 264 | 3.13e-33 | 132 |
Msa0437700 | MtrunA17_Chr4g0059911 | 39.583 | 192 | 112 | 3 | 59 | 247 | 11 | 201 | 9.48e-32 | 127 |
Msa0437700 | MtrunA17_Chr8g0377671 | 33.202 | 253 | 120 | 4 | 44 | 248 | 7 | 258 | 1.23e-31 | 125 |
Msa0437700 | MtrunA17_Chr8g0377671 | 32.143 | 196 | 130 | 2 | 23 | 216 | 76 | 270 | 1.54e-25 | 107 |
Msa0437700 | MtrunA17_Chr2g0316611 | 36.190 | 210 | 131 | 2 | 41 | 248 | 20 | 228 | 9.34e-31 | 124 |
Msa0437700 | MtrunA17_Chr2g0316611 | 36.406 | 217 | 133 | 3 | 36 | 248 | 151 | 366 | 9.20e-29 | 119 |
Msa0437700 | MtrunA17_Chr2g0316611 | 34.673 | 199 | 125 | 2 | 34 | 228 | 78 | 275 | 4.28e-24 | 105 |
Msa0437700 | MtrunA17_Chr2g0316611 | 39.216 | 153 | 88 | 2 | 33 | 181 | 215 | 366 | 2.74e-21 | 96.7 |
Msa0437700 | MtrunA17_Chr8g0382971 | 38.372 | 172 | 105 | 1 | 57 | 228 | 25 | 195 | 1.14e-30 | 124 |
Msa0437700 | MtrunA17_Chr8g0382971 | 34.135 | 208 | 133 | 3 | 43 | 248 | 58 | 263 | 1.34e-27 | 115 |
Msa0437700 | MtrunA17_Chr8g0382971 | 36.913 | 149 | 91 | 1 | 106 | 254 | 27 | 172 | 6.85e-22 | 98.2 |
Msa0437700 | MtrunA17_Chr8g0382971 | 37.278 | 169 | 101 | 2 | 57 | 221 | 117 | 284 | 1.51e-21 | 97.1 |
Msa0437700 | MtrunA17_Chr6g0467061 | 39.106 | 179 | 108 | 1 | 50 | 228 | 12 | 189 | 1.02e-29 | 120 |
Msa0437700 | MtrunA17_Chr6g0467061 | 32.653 | 245 | 135 | 5 | 33 | 248 | 60 | 303 | 2.28e-27 | 114 |
Msa0437700 | MtrunA17_Chr6g0467061 | 37.791 | 172 | 106 | 1 | 57 | 228 | 157 | 327 | 4.04e-23 | 101 |
Msa0437700 | MtrunA17_Chr6g0467061 | 38.129 | 139 | 81 | 2 | 33 | 167 | 198 | 335 | 1.80e-15 | 78.6 |
Msa0437700 | MtrunA17_Chr2g0316631 | 35.849 | 212 | 133 | 2 | 41 | 250 | 20 | 230 | 2.00e-29 | 119 |
Msa0437700 | MtrunA17_Chr2g0316631 | 36.683 | 199 | 121 | 3 | 34 | 228 | 78 | 275 | 1.72e-28 | 116 |
Msa0437700 | MtrunA17_Chr2g0316631 | 31.818 | 176 | 92 | 4 | 34 | 205 | 147 | 298 | 3.80e-17 | 83.2 |
Msa0437700 | MtrunA17_Chr8g0377191 | 36.181 | 199 | 103 | 2 | 53 | 228 | 8 | 205 | 4.74e-29 | 115 |
Msa0437700 | MtrunA17_Chr8g0377191 | 35.570 | 149 | 96 | 0 | 82 | 230 | 13 | 161 | 1.94e-19 | 87.4 |
Msa0437700 | MtrunA17_Chr8g0377191 | 33.108 | 148 | 97 | 1 | 102 | 247 | 10 | 157 | 5.21e-17 | 80.5 |
Msa0437700 | MtrunA17_Chr4g0055371 | 36.416 | 173 | 109 | 1 | 58 | 230 | 173 | 344 | 6.90e-27 | 114 |
Msa0437700 | MtrunA17_Chr4g0055371 | 37.931 | 116 | 72 | 0 | 73 | 188 | 233 | 348 | 3.26e-18 | 87.8 |
Msa0437700 | MtrunA17_Chr4g0055371 | 33.333 | 126 | 84 | 0 | 103 | 228 | 171 | 296 | 8.12e-15 | 77.4 |
Msa0437700 | MtrunA17_Chr7g0233351 | 34.673 | 199 | 127 | 2 | 58 | 256 | 193 | 388 | 9.76e-27 | 114 |
Msa0437700 | MtrunA17_Chr8g0377211 | 39.437 | 142 | 84 | 2 | 53 | 194 | 16 | 155 | 3.27e-25 | 102 |
Msa0437700 | MtrunA17_Chr8g0377211 | 39.394 | 132 | 80 | 0 | 85 | 216 | 23 | 154 | 8.15e-24 | 99.0 |
Msa0437700 | MtrunA17_Chr8g0377211 | 37.097 | 124 | 78 | 0 | 105 | 228 | 20 | 143 | 2.83e-17 | 80.1 |
Msa0437700 | MtrunA17_Chr8g0377211 | 39.167 | 120 | 71 | 1 | 131 | 248 | 23 | 142 | 3.49e-17 | 79.7 |
Msa0437700 | MtrunA17_Chr5g0424111 | 37.912 | 182 | 110 | 2 | 58 | 239 | 198 | 376 | 1.32e-24 | 107 |
Msa0437700 | MtrunA17_Chr5g0424111 | 34.000 | 150 | 99 | 0 | 80 | 229 | 196 | 345 | 2.77e-17 | 85.1 |
Msa0437700 | MtrunA17_Chr8g0336161 | 34.071 | 226 | 143 | 2 | 13 | 238 | 158 | 377 | 1.67e-24 | 107 |
Msa0437700 | MtrunA17_Chr3g0114791 | 34.328 | 201 | 130 | 2 | 32 | 232 | 161 | 359 | 4.29e-24 | 105 |
Msa0437700 | MtrunA17_Chr8g0377221 | 32.314 | 229 | 112 | 4 | 56 | 246 | 4 | 227 | 5.22e-23 | 99.8 |
Msa0437700 | MtrunA17_Chr8g0385241 | 34.826 | 201 | 95 | 3 | 64 | 228 | 13 | 213 | 4.79e-21 | 96.7 |
Msa0437700 | MtrunA17_Chr8g0385241 | 29.717 | 212 | 123 | 4 | 56 | 248 | 124 | 328 | 1.36e-19 | 92.0 |
Msa0437700 | MtrunA17_Chr8g0385241 | 29.386 | 228 | 123 | 4 | 57 | 250 | 56 | 279 | 7.79e-18 | 86.7 |
Msa0437700 | MtrunA17_Chr8g0385241 | 33.121 | 157 | 104 | 1 | 73 | 228 | 173 | 329 | 3.91e-16 | 81.6 |
Msa0437700 | MtrunA17_Chr8g0385241 | 32.121 | 165 | 102 | 1 | 80 | 234 | 9 | 173 | 9.58e-15 | 77.4 |
Msa0437700 | MtrunA17_Chr8g0385241 | 30.247 | 162 | 111 | 2 | 59 | 219 | 183 | 343 | 2.16e-13 | 73.2 |
Msa0437700 | MtrunA17_Chr8g0385241 | 30.216 | 139 | 97 | 0 | 57 | 195 | 204 | 342 | 2.73e-12 | 69.7 |
Msa0437700 | MtrunA17_Chr8g0383331 | 32.143 | 168 | 98 | 3 | 101 | 264 | 1 | 156 | 3.74e-19 | 85.5 |
Msa0437700 | MtrunA17_Chr8g0383331 | 32.653 | 147 | 98 | 1 | 57 | 203 | 4 | 149 | 1.43e-17 | 80.9 |
Msa0437700 | MtrunA17_Chr8g0383331 | 32.653 | 147 | 99 | 0 | 80 | 226 | 3 | 149 | 3.15e-17 | 79.7 |
Msa0437700 | MtrunA17_Chr5g0398011 | 41.525 | 118 | 68 | 1 | 55 | 172 | 33 | 149 | 5.02e-19 | 84.3 |
Msa0437700 | MtrunA17_Chr5g0398011 | 33.621 | 116 | 77 | 0 | 104 | 219 | 35 | 150 | 1.17e-13 | 68.9 |
Msa0437700 | MtrunA17_Chr5g0398011 | 31.579 | 114 | 78 | 0 | 82 | 195 | 36 | 149 | 9.62e-12 | 63.5 |
Msa0437700 | MtrunA17_Chr5g0398021 | 44.554 | 101 | 55 | 1 | 57 | 157 | 13 | 112 | 9.23e-18 | 80.9 |
Msa0437700 | MtrunA17_Chr5g0398021 | 39.423 | 104 | 63 | 0 | 123 | 226 | 9 | 112 | 1.06e-14 | 72.4 |
Msa0437700 | MtrunA17_Chr5g0398021 | 36.364 | 99 | 63 | 0 | 106 | 204 | 15 | 113 | 4.67e-13 | 67.4 |
Msa0437700 | MtrunA17_Chr5g0398021 | 33.333 | 99 | 64 | 1 | 151 | 247 | 14 | 112 | 5.85e-11 | 61.6 |
Msa0437700 | MtrunA17_Chr8g0383551 | 28.571 | 238 | 110 | 9 | 62 | 248 | 33 | 261 | 2.50e-16 | 81.6 |
Msa0437700 | MtrunA17_Chr8g0383551 | 27.607 | 163 | 110 | 4 | 68 | 222 | 129 | 291 | 1.30e-11 | 67.0 |
Msa0437700 | MtrunA17_Chr1g0210831 | 35.200 | 125 | 79 | 2 | 86 | 209 | 618 | 741 | 4.23e-14 | 76.3 |
Msa0437700 | MtrunA17_Chr1g0210831 | 30.400 | 125 | 87 | 0 | 106 | 230 | 615 | 739 | 7.06e-12 | 68.9 |
Msa0437700 | MtrunA17_Chr4g0069951 | 32.927 | 164 | 94 | 7 | 430 | 580 | 1555 | 1715 | 4.98e-11 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0437700 | AT1G77740.2 | 70.914 | 722 | 183 | 6 | 22 | 733 | 49 | 753 | 0.0 | 1041 |
Msa0437700 | AT1G77740.1 | 70.914 | 722 | 183 | 6 | 22 | 733 | 49 | 753 | 0.0 | 1041 |
Msa0437700 | AT1G21980.1 | 69.819 | 719 | 194 | 6 | 22 | 733 | 49 | 751 | 0.0 | 1021 |
Msa0437700 | AT2G26420.2 | 55.510 | 726 | 268 | 15 | 32 | 734 | 26 | 719 | 0.0 | 764 |
Msa0437700 | AT2G26420.3 | 55.510 | 726 | 268 | 15 | 32 | 734 | 26 | 719 | 0.0 | 764 |
Msa0437700 | AT2G26420.1 | 55.034 | 725 | 259 | 14 | 32 | 734 | 26 | 705 | 0.0 | 757 |
Msa0437700 | AT3G07960.1 | 53.857 | 713 | 278 | 13 | 52 | 733 | 22 | 714 | 0.0 | 725 |
Msa0437700 | AT3G07960.1 | 35.514 | 107 | 67 | 1 | 144 | 248 | 21 | 127 | 2.76e-14 | 77.0 |
Msa0437700 | AT3G56960.2 | 51.226 | 734 | 284 | 14 | 52 | 733 | 67 | 778 | 0.0 | 723 |
Msa0437700 | AT3G56960.1 | 51.226 | 734 | 284 | 14 | 52 | 733 | 67 | 778 | 0.0 | 723 |
Msa0437700 | AT2G41210.1 | 51.293 | 735 | 277 | 14 | 52 | 733 | 65 | 771 | 0.0 | 709 |
Msa0437700 | AT3G07960.3 | 55.062 | 563 | 221 | 9 | 52 | 584 | 22 | 582 | 0.0 | 607 |
Msa0437700 | AT3G07960.3 | 35.514 | 107 | 67 | 1 | 144 | 248 | 21 | 127 | 5.77e-14 | 75.9 |
Msa0437700 | AT3G07960.2 | 55.062 | 563 | 221 | 9 | 52 | 584 | 22 | 582 | 0.0 | 607 |
Msa0437700 | AT3G07960.2 | 35.514 | 107 | 67 | 1 | 144 | 248 | 21 | 127 | 7.06e-14 | 75.5 |
Msa0437700 | AT3G07960.4 | 55.062 | 563 | 221 | 9 | 52 | 584 | 22 | 582 | 0.0 | 607 |
Msa0437700 | AT3G07960.4 | 35.514 | 107 | 67 | 1 | 144 | 248 | 21 | 127 | 7.06e-14 | 75.5 |
Msa0437700 | AT3G09920.3 | 40.814 | 811 | 347 | 19 | 29 | 733 | 29 | 812 | 0.0 | 559 |
Msa0437700 | AT3G09920.4 | 40.814 | 811 | 347 | 19 | 29 | 733 | 29 | 812 | 0.0 | 559 |
Msa0437700 | AT3G09920.2 | 40.814 | 811 | 347 | 19 | 29 | 733 | 29 | 812 | 0.0 | 559 |
Msa0437700 | AT3G09920.1 | 40.814 | 811 | 347 | 19 | 29 | 733 | 29 | 812 | 0.0 | 559 |
Msa0437700 | AT1G10900.2 | 41.146 | 768 | 352 | 14 | 50 | 734 | 4 | 754 | 0.0 | 545 |
Msa0437700 | AT1G10900.1 | 41.146 | 768 | 352 | 14 | 50 | 734 | 4 | 754 | 0.0 | 545 |
Msa0437700 | AT1G10900.3 | 41.146 | 768 | 352 | 14 | 50 | 734 | 4 | 754 | 0.0 | 545 |
Msa0437700 | AT1G60890.1 | 38.608 | 790 | 352 | 18 | 50 | 732 | 4 | 767 | 6.61e-171 | 510 |
Msa0437700 | AT1G60890.2 | 38.579 | 788 | 351 | 18 | 52 | 732 | 18 | 779 | 5.97e-170 | 508 |
Msa0437700 | AT1G01460.1 | 38.263 | 426 | 210 | 10 | 355 | 733 | 3 | 422 | 9.66e-79 | 259 |
Msa0437700 | AT4G01190.1 | 36.432 | 398 | 195 | 6 | 372 | 730 | 12 | 390 | 1.03e-73 | 244 |
Msa0437700 | AT4G01190.3 | 36.432 | 398 | 195 | 6 | 372 | 730 | 22 | 400 | 1.79e-73 | 244 |
Msa0437700 | AT4G01190.2 | 36.432 | 398 | 195 | 6 | 372 | 730 | 22 | 400 | 1.79e-73 | 244 |
Msa0437700 | AT2G35170.1 | 34.518 | 197 | 125 | 2 | 60 | 256 | 229 | 421 | 1.23e-26 | 114 |
Msa0437700 | AT4G17080.1 | 35.260 | 173 | 111 | 1 | 58 | 230 | 258 | 429 | 4.43e-25 | 110 |
Msa0437700 | AT4G17080.1 | 38.793 | 116 | 71 | 0 | 73 | 188 | 318 | 433 | 6.57e-21 | 97.4 |
Msa0437700 | AT4G17080.1 | 34.899 | 149 | 95 | 1 | 80 | 228 | 235 | 381 | 3.67e-17 | 85.9 |
Msa0437700 | AT1G77660.1 | 34.715 | 193 | 122 | 2 | 43 | 232 | 161 | 352 | 4.45e-24 | 106 |
Msa0437700 | AT1G21920.2 | 35.260 | 173 | 111 | 1 | 58 | 230 | 175 | 346 | 8.33e-23 | 101 |
Msa0437700 | AT1G21920.2 | 38.261 | 115 | 71 | 0 | 73 | 187 | 235 | 349 | 1.23e-15 | 79.7 |
Msa0437700 | AT1G21920.2 | 30.667 | 150 | 81 | 1 | 103 | 229 | 173 | 322 | 1.62e-12 | 70.1 |
Msa0437700 | AT1G21920.2 | 36.792 | 106 | 65 | 2 | 145 | 248 | 169 | 274 | 8.98e-11 | 64.7 |
Msa0437700 | AT1G21920.1 | 35.260 | 173 | 111 | 1 | 58 | 230 | 175 | 346 | 1.13e-22 | 101 |
Msa0437700 | AT1G21920.1 | 36.434 | 129 | 81 | 1 | 59 | 187 | 222 | 349 | 1.51e-15 | 80.1 |
Msa0437700 | AT1G21920.1 | 30.667 | 150 | 81 | 1 | 103 | 229 | 173 | 322 | 1.60e-12 | 70.5 |
Msa0437700 | AT1G21920.1 | 36.792 | 106 | 65 | 2 | 145 | 248 | 169 | 274 | 9.14e-11 | 65.1 |
Msa0437700 | AT1G34260.2 | 32.161 | 199 | 111 | 7 | 399 | 580 | 1192 | 1383 | 1.24e-14 | 79.0 |
Msa0437700 | AT1G34260.1 | 32.161 | 199 | 111 | 7 | 399 | 580 | 1192 | 1383 | 1.24e-14 | 79.0 |
Msa0437700 | AT1G34260.3 | 32.161 | 199 | 111 | 7 | 399 | 580 | 1192 | 1383 | 1.24e-14 | 79.0 |
Msa0437700 | AT1G34260.4 | 32.161 | 199 | 111 | 7 | 399 | 580 | 952 | 1143 | 1.39e-14 | 78.6 |
Msa0437700 | AT1G75010.1 | 33.594 | 128 | 83 | 2 | 83 | 209 | 604 | 730 | 6.70e-14 | 75.9 |
Msa0437700 | AT1G75010.1 | 28.000 | 125 | 90 | 0 | 106 | 230 | 604 | 728 | 6.08e-11 | 66.6 |
Find 220 sgRNAs with CRISPR-Local
Find 356 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TATGATGTTGTTCTATATTT+TGG | 0.034831 | 3_3:+1638458 | Msa0437700:CDS |
GTTGAAGGTGGAAAGGATTT+TGG | 0.125060 | 3_3:+1635882 | Msa0437700:CDS |
ATGGCAAAATCTTCAAAATT+TGG | 0.147602 | 3_3:-1638820 | None:intergenic |
CGAGTTTAAGTTAGGTAAAA+TGG | 0.171327 | 3_3:+1635437 | Msa0437700:CDS |
GCCATGCGCTCTGCTCTTGC+TGG | 0.224688 | 3_3:-1638362 | None:intergenic |
TTAATCTTCAATTGGGTATA+AGG | 0.226807 | 3_3:+1636117 | Msa0437700:CDS |
CAATAGACTGTTTGATTAAC+AGG | 0.251542 | 3_3:+1638769 | Msa0437700:three_prime_UTR |
TCGAAACTGCTTAATCTCTT+TGG | 0.256358 | 3_3:-1636012 | None:intergenic |
TCACTTGTGACAAAATTCTA+TGG | 0.265062 | 3_3:+1636934 | Msa0437700:CDS |
ACAATTGAGGAAGCGATTTC+AGG | 0.271948 | 3_3:+1636613 | Msa0437700:CDS |
CAATTTCGAGCTTTCTTTCC+TGG | 0.275413 | 3_3:-1638719 | None:intergenic |
TTGATTTGAAGGAGAAGTTT+TGG | 0.277331 | 3_3:+1636291 | Msa0437700:CDS |
CTTTGAACCAATTTCTTTGC+AGG | 0.287736 | 3_3:-1637242 | None:intergenic |
TGTTTCGCCTGCAAAGAAAT+TGG | 0.293239 | 3_3:+1637235 | Msa0437700:CDS |
CACTTTCCTCTCCTCTTTGC+CGG | 0.293574 | 3_3:+1635045 | Msa0437700:five_prime_UTR |
GAAGAGGTTTCGTGATTTCT+TGG | 0.294492 | 3_3:+1638592 | Msa0437700:CDS |
GGAAAATTCTCGTGGCCTTC+AGG | 0.294946 | 3_3:+1635399 | Msa0437700:CDS |
GTATCCGCGCATTTGGATTC+CGG | 0.295358 | 3_3:-1639030 | None:intergenic |
AAGCAGTTTCGACGGAATTC+TGG | 0.296681 | 3_3:+1636023 | Msa0437700:CDS |
TTTGGAAGCTGAAGGAATTA+TGG | 0.301969 | 3_3:+1637393 | Msa0437700:CDS |
TGATAATACTTGTGACAAAA+TGG | 0.310651 | 3_3:+1637450 | Msa0437700:CDS |
AATTATGGATTACAGTCTTT+TGG | 0.313536 | 3_3:+1637408 | Msa0437700:CDS |
AAGAGGTTTCGTGATTTCTT+GGG | 0.322150 | 3_3:+1638593 | Msa0437700:CDS |
CGAAACTGCTTAATCTCTTT+GGG | 0.329372 | 3_3:-1636011 | None:intergenic |
CCTTCAGTGAACCATCATTA+TGG | 0.332152 | 3_3:-1638839 | None:intergenic |
TCTTATGCTTAATCTTCAAT+TGG | 0.334042 | 3_3:+1636109 | Msa0437700:CDS |
GTTTCAGGAAATCATTGATT+AGG | 0.336752 | 3_3:+1638324 | Msa0437700:intron |
CCTTCAAGTCAAATCGTCTA+TGG | 0.339301 | 3_3:-1637128 | None:intergenic |
GTTGGGATGTGTAGATTCTT+TGG | 0.344943 | 3_3:+1638932 | Msa0437700:three_prime_UTR |
TGGGAATCTGATGGTGAAAA+AGG | 0.345497 | 3_3:+1635918 | Msa0437700:CDS |
TCCGTTTGGTGTGTTGTTGC+CGG | 0.352531 | 3_3:-1635304 | None:intergenic |
TTTCTGTCTTTCCATTGGTT+GGG | 0.355867 | 3_3:+1638915 | Msa0437700:three_prime_UTR |
CGAGGAAAAGCTTCCGGAAA+TGG | 0.359329 | 3_3:+1635378 | Msa0437700:CDS |
GGAACGCTTGTTTGGTTGAA+TGG | 0.360362 | 3_3:+1635675 | Msa0437700:CDS |
AAGGAAAAGGGAGGTATGTT+TGG | 0.362141 | 3_3:+1635598 | Msa0437700:CDS |
TAATATCATATTCTACTTTG+TGG | 0.362188 | 3_3:-1638958 | None:intergenic |
CGAACATGTTTCTCAATATG+AGG | 0.363324 | 3_3:+1636909 | Msa0437700:CDS |
GTAAACACACCTTGCCCTTT+CGG | 0.365516 | 3_3:-1635732 | None:intergenic |
CAATGCGACAAGGAGTAAAA+TGG | 0.367842 | 3_3:-1638427 | None:intergenic |
CTAACTTATAGGTACTTATT+CGG | 0.368553 | 3_3:+1636869 | Msa0437700:intron |
AATTCGATTGTTATGCTTGT+TGG | 0.369321 | 3_3:-1635216 | None:intergenic |
TTCAATCTTCTTTATTGAAT+GGG | 0.369480 | 3_3:+1635808 | Msa0437700:CDS |
TTTCAATCTTCTTTATTGAA+TGG | 0.371669 | 3_3:+1635807 | Msa0437700:CDS |
TAGTGATTGGTGCTATTTAC+TGG | 0.377186 | 3_3:-1634829 | None:intergenic |
ATAATGTATCGGTGTTGAAT+AGG | 0.380784 | 3_3:+1635964 | Msa0437700:CDS |
GAGATATTTACAGTGGTTCA+TGG | 0.381217 | 3_3:+1635490 | Msa0437700:CDS |
CTCGAAATTGATTCGGGTGT+TGG | 0.382501 | 3_3:+1638732 | Msa0437700:three_prime_UTR |
GAAGTTGCTATGTTGGGAAT+TGG | 0.382649 | 3_3:+1635766 | Msa0437700:CDS |
TCTTACATGGGAACCTTCTC+CGG | 0.385552 | 3_3:+1635285 | Msa0437700:CDS |
TGTCTTGTAGCTCTGCTTCA+AGG | 0.388811 | 3_3:-1637642 | None:intergenic |
ACGGAAGAGGAACGCTTGTT+TGG | 0.389884 | 3_3:+1635667 | Msa0437700:CDS |
AAGAATGTTCAAGAAGGAAA+AGG | 0.390966 | 3_3:+1635585 | Msa0437700:CDS |
AAGTAAAGTATCCGCGCATT+TGG | 0.391357 | 3_3:-1639037 | None:intergenic |
CTCAGGGAGCTTTCATCTCC+TGG | 0.397244 | 3_3:+1636680 | Msa0437700:CDS |
AACCTCTTCGAGTAAAGCTT+TGG | 0.403371 | 3_3:-1638578 | None:intergenic |
TACGAAGGCGAGTTTAAGTT+AGG | 0.409763 | 3_3:+1635429 | Msa0437700:CDS |
AAGGGCAAGGTGTGTTTACT+TGG | 0.414183 | 3_3:+1635736 | Msa0437700:CDS |
TGCTGAAGTGTGACCGGGTA+CGG | 0.416039 | 3_3:-1635179 | None:intergenic |
TGATCATAAATCTGTCATCT+TGG | 0.417508 | 3_3:-1636730 | None:intergenic |
GATTACATGTTAGCTATTTG+TGG | 0.418084 | 3_3:+1636647 | Msa0437700:CDS |
GATTGCCCATCACGATGAAC+CGG | 0.420765 | 3_3:-1637083 | None:intergenic |
AAGAAAGCTCGAAATTGATT+CGG | 0.421732 | 3_3:+1638725 | Msa0437700:three_prime_UTR |
TTAGGTAAAATGGAAGGTTC+TGG | 0.422048 | 3_3:+1635447 | Msa0437700:CDS |
AGGAAATCATTGATTAGGTT+AGG | 0.422069 | 3_3:+1638329 | Msa0437700:intron |
TATGAAGGTGAATGGGAAAA+TGG | 0.423372 | 3_3:+1635705 | Msa0437700:CDS |
ATTGATTCGGGTGTTGGAAT+TGG | 0.431077 | 3_3:+1638738 | Msa0437700:three_prime_UTR |
GTACGGCCGGTGGTAGTAAC+CGG | 0.434456 | 3_3:-1635162 | None:intergenic |
TGGAAACGAGGAAAAGCTTC+CGG | 0.437406 | 3_3:+1635372 | Msa0437700:CDS |
CATACCTTCTGGCCTCCAAT+TGG | 0.438269 | 3_3:-1636973 | None:intergenic |
TTGACCAATACACCAGTCTT+GGG | 0.443312 | 3_3:+1638399 | Msa0437700:CDS |
ATTGAGATCGAGGTCTTTGA+GGG | 0.447025 | 3_3:-1637208 | None:intergenic |
ACCGGGTGAAACTATATGTA+AGG | 0.448524 | 3_3:+1636070 | Msa0437700:CDS |
ACGGAGATTATTATGAAGGT+TGG | 0.448575 | 3_3:+1635556 | Msa0437700:CDS |
CTTATGCTTAATCTTCAATT+GGG | 0.449000 | 3_3:+1636110 | Msa0437700:CDS |
TCCGGCTGCTGAAGTGTGAC+CGG | 0.449099 | 3_3:-1635185 | None:intergenic |
AGAAAGCTCGAAATTGATTC+GGG | 0.449961 | 3_3:+1638726 | Msa0437700:three_prime_UTR |
TTTGACCAATACACCAGTCT+TGG | 0.451828 | 3_3:+1638398 | Msa0437700:CDS |
AATTGAGATCGAGGTCTTTG+AGG | 0.452408 | 3_3:-1637209 | None:intergenic |
AGAATGTTCAAGAAGGAAAA+GGG | 0.454701 | 3_3:+1635586 | Msa0437700:CDS |
GATCATAAATCTGTCATCTT+GGG | 0.456803 | 3_3:-1636729 | None:intergenic |
TGGAGTAATCTAGTTATTGA+TGG | 0.457170 | 3_3:-1634907 | None:intergenic |
CACTTGTGACAAAATTCTAT+GGG | 0.459389 | 3_3:+1636935 | Msa0437700:CDS |
AATTGATCTGAATAATATCC+AGG | 0.461248 | 3_3:+1638701 | Msa0437700:three_prime_UTR |
GTACATTGTGTCAAACCAAT+TGG | 0.461773 | 3_3:+1636958 | Msa0437700:CDS |
TGGACTAGGTTTCCTTCTGA+AGG | 0.464564 | 3_3:+1636311 | Msa0437700:CDS |
TCATCCCAAGACTGGTGTAT+TGG | 0.465016 | 3_3:-1638403 | None:intergenic |
ACCCAACGGTGATTCTTACA+TGG | 0.468531 | 3_3:+1635272 | Msa0437700:CDS |
TGTTTCTGAGGTTAAGAGAC+CGG | 0.469082 | 3_3:+1636052 | Msa0437700:CDS |
GGAATCGTTATGAAGGTGAA+TGG | 0.469561 | 3_3:+1635697 | Msa0437700:CDS |
GGTAACGGAGATTATTATGA+AGG | 0.472824 | 3_3:+1635552 | Msa0437700:CDS |
TGGTGTGTTGTTGCCGGAGA+AGG | 0.473091 | 3_3:-1635298 | None:intergenic |
TGGAAGAACGGTGTTATTAA+CGG | 0.473795 | 3_3:+1635648 | Msa0437700:CDS |
GAACGCTTGTTTGGTTGAAT+GGG | 0.476408 | 3_3:+1635676 | Msa0437700:CDS |
AACAACACACCAAACGGATC+AGG | 0.483095 | 3_3:+1635309 | Msa0437700:CDS |
CCATAGACGATTTGACTTGA+AGG | 0.483414 | 3_3:+1637128 | Msa0437700:CDS |
AGAGAGAGGTGCATAGTGAT+TGG | 0.484279 | 3_3:-1634842 | None:intergenic |
TTTGTGGAAATGCTGCCCTC+AGG | 0.484497 | 3_3:+1636663 | Msa0437700:CDS |
AAAATATAGAACAACATCAT+AGG | 0.485216 | 3_3:-1638456 | None:intergenic |
AGGAGAGGAAAGTGTTGTGT+TGG | 0.487465 | 3_3:-1635036 | None:intergenic |
GACAGGGATAGAGTCAAATC+TGG | 0.491174 | 3_3:+1637661 | Msa0437700:CDS |
GTAATCTAGTTATTGATGGC+TGG | 0.491561 | 3_3:-1634903 | None:intergenic |
CAAGAGCAGAGCGCATGGCT+CGG | 0.492297 | 3_3:+1638366 | Msa0437700:CDS |
GAGATTATTATGAAGGTTGG+TGG | 0.493359 | 3_3:+1635559 | Msa0437700:CDS |
GTTGTATCTACGAAGGTGAA+TGG | 0.494101 | 3_3:+1635352 | Msa0437700:CDS |
CTTTCATCTCCTGGCAAAAG+TGG | 0.494331 | 3_3:+1636689 | Msa0437700:CDS |
TCCGGCAACAACACACCAAA+CGG | 0.494538 | 3_3:+1635303 | Msa0437700:CDS |
ACTGTTTGATTAACAGGCTA+TGG | 0.494837 | 3_3:+1638775 | Msa0437700:three_prime_UTR |
GTATCGGTGTTGAATAGGAT+TGG | 0.499415 | 3_3:+1635969 | Msa0437700:CDS |
CGAGTAAAGCTTTGGATCAA+CGG | 0.499572 | 3_3:-1638570 | None:intergenic |
ACGGATCAGGAAAATACAAA+TGG | 0.500009 | 3_3:+1635322 | Msa0437700:CDS |
CCGGCTGCTGAAGTGTGACC+GGG | 0.500586 | 3_3:-1635184 | None:intergenic |
TTGGAAGGATTACTGCCCTA+TGG | 0.500847 | 3_3:+1636373 | Msa0437700:CDS |
ATCCAAAGCTTTACTCGAAG+AGG | 0.501514 | 3_3:+1638576 | Msa0437700:CDS |
TTACGACATCAGCAAGAAGC+TGG | 0.503669 | 3_3:+1638502 | Msa0437700:CDS |
GTTCTGCTTTGTTTCTACTT+CGG | 0.504257 | 3_3:-1634947 | None:intergenic |
AAATGCGCGGATACTTTACT+TGG | 0.507314 | 3_3:+1639039 | Msa0437700:three_prime_UTR |
CGGCTGTGAGTCTGAGGAGG+AGG | 0.510524 | 3_3:-1635139 | None:intergenic |
ATCAATCGATGGAGTTCCGT+TGG | 0.514044 | 3_3:+1636354 | Msa0437700:CDS |
CCAACATAGCAACTTCCATC+AGG | 0.514644 | 3_3:-1635759 | None:intergenic |
AAGTCAAATCGTCTATGGAT+TGG | 0.518884 | 3_3:-1637123 | None:intergenic |
AACGGTGTTATTAACGGAAG+AGG | 0.520673 | 3_3:+1635654 | Msa0437700:CDS |
CTGATGGAAGTTGCTATGTT+GGG | 0.522196 | 3_3:+1635760 | Msa0437700:CDS |
GGAATGAGTATATTGGTGAA+TGG | 0.523321 | 3_3:+1635628 | Msa0437700:CDS |
TGTTTCATACTCGATGCTAC+CGG | 0.523766 | 3_3:-1638634 | None:intergenic |
CCCGGTCACACTTCAGCAGC+CGG | 0.523983 | 3_3:+1635184 | Msa0437700:CDS |
GGAAAGAAACGTTACGGTAA+CGG | 0.525703 | 3_3:+1635537 | Msa0437700:CDS |
GATAATACTTGTGACAAAAT+GGG | 0.528057 | 3_3:+1637451 | Msa0437700:CDS |
ATCGATGGAGTTCCGTTGGA+AGG | 0.528474 | 3_3:+1636358 | Msa0437700:CDS |
CCTGATGGAAGTTGCTATGT+TGG | 0.529482 | 3_3:+1635759 | Msa0437700:CDS |
TTGAAGCAGAGCTACAAGAC+AGG | 0.533588 | 3_3:+1637644 | Msa0437700:CDS |
GTTGGTAATAACAGAATGAA+AGG | 0.533700 | 3_3:-1635018 | None:intergenic |
CTGAGGAGGAGGTGTTGTTG+TGG | 0.534300 | 3_3:-1635128 | None:intergenic |
TTGTGGAAATGCTGCCCTCA+GGG | 0.535698 | 3_3:+1636664 | Msa0437700:CDS |
CCCAACGGTGATTCTTACAT+GGG | 0.537955 | 3_3:+1635273 | Msa0437700:CDS |
GAATCGTTATGAAGGTGAAT+GGG | 0.538035 | 3_3:+1635698 | Msa0437700:CDS |
CATAGACGATTTGACTTGAA+GGG | 0.539532 | 3_3:+1637129 | Msa0437700:CDS |
TGTATTTGTAGGCACTCTGT+TGG | 0.540782 | 3_3:+1636227 | Msa0437700:intron |
GGTGTGTTTACTTGGCCTGA+TGG | 0.542730 | 3_3:+1635744 | Msa0437700:CDS |
GGGAAAATGGTGTTCCGAAA+GGG | 0.544352 | 3_3:+1635718 | Msa0437700:CDS |
TTGTAGGCACTCTGTTGGAA+AGG | 0.546723 | 3_3:+1636232 | Msa0437700:intron |
ATAGCTAACATGTAATCAGC+AGG | 0.548324 | 3_3:-1636641 | None:intergenic |
CTCCTCAGACTCACAGCCGC+CGG | 0.550423 | 3_3:+1635143 | Msa0437700:CDS |
CCCTTACATATAGTTTCACC+CGG | 0.553878 | 3_3:-1636071 | None:intergenic |
TCAACGGCTGAGATTGATGA+AGG | 0.553947 | 3_3:-1638554 | None:intergenic |
CAGCCGCCGGTTACTACCAC+CGG | 0.555866 | 3_3:+1635156 | Msa0437700:CDS |
ACAGACCCGGTTCATCGTGA+TGG | 0.557962 | 3_3:+1637077 | Msa0437700:intron |
CTTCAGTCTTATCTGTCGTA+CGG | 0.558988 | 3_3:-1637164 | None:intergenic |
AGCTCAGAAAAGAAGTCAGA+AGG | 0.561565 | 3_3:-1634878 | None:intergenic |
CCCATGTAAGAATCACCGTT+GGG | 0.561567 | 3_3:-1635273 | None:intergenic |
CCATAATGATGGTTCACTGA+AGG | 0.562321 | 3_3:+1638839 | Msa0437700:three_prime_UTR |
AAAATGGCTCATCCCAAGAC+TGG | 0.564949 | 3_3:-1638411 | None:intergenic |
AGAGGTTTCGTGATTTCTTG+GGG | 0.567121 | 3_3:+1638594 | Msa0437700:CDS |
TTACTACCACCGGCCGTACC+CGG | 0.570013 | 3_3:+1635166 | Msa0437700:CDS |
GCCAGCAAGAGCAGAGCGCA+TGG | 0.570278 | 3_3:+1638361 | Msa0437700:CDS |
TTTAAGTTAGGTAAAATGGA+AGG | 0.570615 | 3_3:+1635441 | Msa0437700:CDS |
TTGCTGTGACAATGAGGAAG+AGG | 0.570749 | 3_3:+1635853 | Msa0437700:CDS |
GACTTGAAGGGATCGTCACA+TGG | 0.570790 | 3_3:+1637141 | Msa0437700:CDS |
CAGACCCGGTTCATCGTGAT+GGG | 0.574346 | 3_3:+1637078 | Msa0437700:intron |
ATGATGGTTCACTGAAGGCA+AGG | 0.575597 | 3_3:+1638844 | Msa0437700:three_prime_UTR |
GTGTGACCGGGTACGGCCGG+TGG | 0.576629 | 3_3:-1635172 | None:intergenic |
TGGGAAAATGGTGTTCCGAA+AGG | 0.578671 | 3_3:+1635717 | Msa0437700:CDS |
AACCGGCGGCTGTGAGTCTG+AGG | 0.581864 | 3_3:-1635145 | None:intergenic |
AACTCCATCGATTGATGTGG+TGG | 0.582178 | 3_3:-1636347 | None:intergenic |
ATTTGTATTTGGGAATCTGA+TGG | 0.583123 | 3_3:+1635909 | Msa0437700:CDS |
AATCTACACATCCCAACCAA+TGG | 0.584960 | 3_3:-1638926 | None:intergenic |
TCCCATGTAAGAATCACCGT+TGG | 0.585589 | 3_3:-1635274 | None:intergenic |
TGATATTGTTGATAATGTAT+CGG | 0.585855 | 3_3:+1635953 | Msa0437700:CDS |
ATTGAGGAAGCGATTTCAGG+TGG | 0.589268 | 3_3:+1636616 | Msa0437700:CDS |
GAGCAGAGCGCATGGCTCGG+AGG | 0.591132 | 3_3:+1638369 | Msa0437700:CDS |
TTGAATGGGAATCGTTATGA+AGG | 0.597420 | 3_3:+1635690 | Msa0437700:CDS |
AATGGTGTTCCGAAAGGGCA+AGG | 0.597645 | 3_3:+1635723 | Msa0437700:CDS |
GTTTCTGAGGTTAAGAGACC+GGG | 0.597952 | 3_3:+1636053 | Msa0437700:CDS |
GAAGTGTGACCGGGTACGGC+CGG | 0.598746 | 3_3:-1635175 | None:intergenic |
ATTGTCCAGACAAATTGAGA+GGG | 0.600968 | 3_3:+1637360 | Msa0437700:intron |
TCCTTCAAATCAAAATCACT+CGG | 0.601151 | 3_3:-1636281 | None:intergenic |
TGGAAGAAGAATGTTCAAGA+AGG | 0.601723 | 3_3:+1635579 | Msa0437700:CDS |
CAAACCAATTGGAGGCCAGA+AGG | 0.602903 | 3_3:+1636969 | Msa0437700:CDS |
GCATGCATACAAGTCACTGC+AGG | 0.604105 | 3_3:+1638526 | Msa0437700:CDS |
GTAATCTTAGATCCTTCAGA+AGG | 0.607853 | 3_3:-1636323 | None:intergenic |
CCGGGTGAAACTATATGTAA+GGG | 0.608012 | 3_3:+1636071 | Msa0437700:CDS |
AATTGTCCAGACAAATTGAG+AGG | 0.609484 | 3_3:+1637359 | Msa0437700:intron |
ATTGCCCATCACGATGAACC+GGG | 0.610262 | 3_3:-1637082 | None:intergenic |
GGGATAGAGTCAAATCTGGC+CGG | 0.612890 | 3_3:+1637665 | Msa0437700:CDS |
GGAGAATATTCAGTGAGGAC+CGG | 0.614114 | 3_3:+1638615 | Msa0437700:CDS |
CCTTCAGGTTCTATTTACGA+AGG | 0.614367 | 3_3:+1635414 | Msa0437700:CDS |
GGAAAATACAAATGGAACGA+TGG | 0.614574 | 3_3:+1635330 | Msa0437700:CDS |
CGGCGGCTGTGAGTCTGAGG+AGG | 0.620840 | 3_3:-1635142 | None:intergenic |
CATTGTGTCAAACCAATTGG+AGG | 0.621598 | 3_3:+1636961 | Msa0437700:CDS |
CAGAGTGAAAAGTTTATGCG+TGG | 0.622075 | 3_3:+1637610 | Msa0437700:CDS |
GTCACAGCAAAATCATCACC+AGG | 0.624630 | 3_3:-1635840 | None:intergenic |
AGGAGATGAAAGCTCCCTGA+GGG | 0.626112 | 3_3:-1636678 | None:intergenic |
CCTTCGTAAATAGAACCTGA+AGG | 0.628853 | 3_3:-1635414 | None:intergenic |
TATATTGGTGAATGGAAGAA+CGG | 0.630785 | 3_3:+1635636 | Msa0437700:CDS |
TGATGGTTCACTGAAGGCAA+GGG | 0.631854 | 3_3:+1638845 | Msa0437700:three_prime_UTR |
TACGCCACCACATCAATCGA+TGG | 0.633033 | 3_3:+1636343 | Msa0437700:CDS |
AAGAGATTAAGCAGTTTCGA+CGG | 0.635005 | 3_3:+1636015 | Msa0437700:CDS |
CGGAACTCCATCGATTGATG+TGG | 0.636137 | 3_3:-1636350 | None:intergenic |
TGATCTTTGTACATGAAAGA+TGG | 0.636260 | 3_3:+1638868 | Msa0437700:three_prime_UTR |
GAAACACAAAATTGAGATCG+AGG | 0.636698 | 3_3:-1637218 | None:intergenic |
GAGATCGAGGTCTTTGAGGG+TGG | 0.639500 | 3_3:-1637205 | None:intergenic |
CGGGTGAAACTATATGTAAG+GGG | 0.642189 | 3_3:+1636072 | Msa0437700:CDS |
CCGGAAATGGAAAATTCTCG+TGG | 0.642730 | 3_3:+1635391 | Msa0437700:CDS |
AATGTTGTCATGAATCATGA+TGG | 0.647937 | 3_3:+1638665 | Msa0437700:three_prime_UTR |
TGAAGCAGAGCTACAAGACA+GGG | 0.650372 | 3_3:+1637645 | Msa0437700:CDS |
ATGTTCAAGAAGGAAAAGGG+AGG | 0.651936 | 3_3:+1635589 | Msa0437700:CDS |
TAGCATCGAGTATGAAACAA+AGG | 0.652241 | 3_3:+1638638 | Msa0437700:exon |
ACCACTGTAAATATCTCCGT+CGG | 0.657482 | 3_3:-1635484 | None:intergenic |
GGTTACGGAAAGAAACGTTA+CGG | 0.659807 | 3_3:+1635531 | Msa0437700:CDS |
TAGGTCTCCCCAATGCGACA+AGG | 0.659959 | 3_3:-1638437 | None:intergenic |
TAGGGCAGTAATCCTTCCAA+CGG | 0.670381 | 3_3:-1636370 | None:intergenic |
CGGCCGGTGGTAGTAACCGG+CGG | 0.680663 | 3_3:-1635159 | None:intergenic |
TCTTTGTACATGAAAGATGG+TGG | 0.688843 | 3_3:+1638871 | Msa0437700:three_prime_UTR |
AACGATGGTTGTATCTACGA+AGG | 0.690640 | 3_3:+1635345 | Msa0437700:CDS |
CTTGGGGAGAATATTCAGTG+AGG | 0.694230 | 3_3:+1638610 | Msa0437700:CDS |
ACTTGTGACAAAATTCTATG+GGG | 0.699706 | 3_3:+1636936 | Msa0437700:CDS |
GAAACCGGAATCCAAATGCG+CGG | 0.700353 | 3_3:+1639026 | Msa0437700:three_prime_UTR |
CAGGAGATGAAAGCTCCCTG+AGG | 0.700563 | 3_3:-1636679 | None:intergenic |
TCCGACGGAGATATTTACAG+TGG | 0.708834 | 3_3:+1635483 | Msa0437700:CDS |
TGAAAGGAAATGAATCACTG+TGG | 0.718371 | 3_3:-1635002 | None:intergenic |
TACGAAGGTGAATGGAAACG+AGG | 0.723760 | 3_3:+1635360 | Msa0437700:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAAATTATTGCTATTTTAA+GGG | + | chr3_3:1637008-1637027 | Msa0437700:intron | 10.0% |
!!! | TTTAAGTTGATAAAATAATT+AGG | + | chr3_3:1637717-1637736 | Msa0437700:intron | 10.0% |
!!! | GATAAATTATTGCTATTTTA+AGG | + | chr3_3:1637007-1637026 | Msa0437700:intron | 15.0% |
!!! | ATTATATTGTTTATCCTTTT+AGG | + | chr3_3:1637571-1637590 | Msa0437700:intron | 15.0% |
!!! | TTCTATAAAATGTTGATTTA+GGG | - | chr3_3:1637799-1637818 | None:intergenic | 15.0% |
!!! | ATTCTATAAAATGTTGATTT+AGG | - | chr3_3:1637800-1637819 | None:intergenic | 15.0% |
!!! | CAACATTTTATAGAATAATT+AGG | + | chr3_3:1637804-1637823 | Msa0437700:intron | 15.0% |
!! | ACATAAAAATATGAATGATT+AGG | - | chr3_3:1637986-1638005 | None:intergenic | 15.0% |
!! | TTATGAATGTAAAAAATGTT+AGG | + | chr3_3:1638978-1638997 | Msa0437700:three_prime_UTR | 15.0% |
!!! | AATCAATGCATTTTTTTTTC+CGG | - | chr3_3:1635067-1635086 | None:intergenic | 20.0% |
!! | TTTCAATCTTCTTTATTGAA+TGG | + | chr3_3:1635807-1635826 | Msa0437700:CDS | 20.0% |
!! | TTCAATCTTCTTTATTGAAT+GGG | + | chr3_3:1635808-1635827 | Msa0437700:CDS | 20.0% |
!!! | TGATATTGTTGATAATGTAT+CGG | + | chr3_3:1635953-1635972 | Msa0437700:CDS | 20.0% |
!! | CAATAATTTATCTTCAACAA+AGG | - | chr3_3:1636999-1637018 | None:intergenic | 20.0% |
!! | AAACAAGCAATCAATTAATT+AGG | - | chr3_3:1638120-1638139 | None:intergenic | 20.0% |
!!! | ATACCATCTCTATATTTTAT+TGG | + | chr3_3:1638156-1638175 | Msa0437700:intron | 20.0% |
!!! | TAAATTTTGATGTGTTAAGT+AGG | + | chr3_3:1638292-1638311 | Msa0437700:intron | 20.0% |
!! | AAAATATAGAACAACATCAT+AGG | - | chr3_3:1638459-1638478 | None:intergenic | 20.0% |
!!! | TATGATGTTGTTCTATATTT+TGG | + | chr3_3:1638458-1638477 | Msa0437700:CDS | 20.0% |
!!! | ATGATGTTGTTCTATATTTT+GGG | + | chr3_3:1638459-1638478 | Msa0437700:CDS | 20.0% |
!! | TAATATCATATTCTACTTTG+TGG | - | chr3_3:1638961-1638980 | None:intergenic | 20.0% |
!! | AATGTAAAAAATGTTAGGTA+GGG | + | chr3_3:1638983-1639002 | Msa0437700:three_prime_UTR | 20.0% |
!! | TTTAAGTTAGGTAAAATGGA+AGG | + | chr3_3:1635441-1635460 | Msa0437700:CDS | 25.0% |
!!! | ATTTTGGGAAGATTTGTATT+TGG | + | chr3_3:1635898-1635917 | Msa0437700:CDS | 25.0% |
!!! | TTTTGGGAAGATTTGTATTT+GGG | + | chr3_3:1635899-1635918 | Msa0437700:CDS | 25.0% |
! | TCTTATGCTTAATCTTCAAT+TGG | + | chr3_3:1636109-1636128 | Msa0437700:CDS | 25.0% |
! | CTTATGCTTAATCTTCAATT+GGG | + | chr3_3:1636110-1636129 | Msa0437700:CDS | 25.0% |
! | TTAATCTTCAATTGGGTATA+AGG | + | chr3_3:1636117-1636136 | Msa0437700:CDS | 25.0% |
!! | TTTGTAATTTGCATTAGTTC+TGG | + | chr3_3:1636183-1636202 | Msa0437700:intron | 25.0% |
!! | TTCTGGATTTAAGGAATTTT+TGG | + | chr3_3:1636200-1636219 | Msa0437700:intron | 25.0% |
!!! | TTTTTGGTTTGTGTATTTGT+AGG | + | chr3_3:1636216-1636235 | Msa0437700:intron | 25.0% |
! | AATGATTAACATTAACTACC+AGG | - | chr3_3:1636427-1636446 | None:intergenic | 25.0% |
! | TTATTCTCCTTGTGTTAATT+AGG | - | chr3_3:1636572-1636591 | None:intergenic | 25.0% |
!! | TTTTGAATTTCAGACAATTG+AGG | + | chr3_3:1636600-1636619 | Msa0437700:intron | 25.0% |
! | CTAACTTATAGGTACTTATT+CGG | + | chr3_3:1636869-1636888 | Msa0437700:intron | 25.0% |
!!! | AATTATGGATTACAGTCTTT+TGG | + | chr3_3:1637408-1637427 | Msa0437700:CDS | 25.0% |
! | TGATAATACTTGTGACAAAA+TGG | + | chr3_3:1637450-1637469 | Msa0437700:CDS | 25.0% |
! | GATAATACTTGTGACAAAAT+GGG | + | chr3_3:1637451-1637470 | Msa0437700:CDS | 25.0% |
!! | TTTTATGTTGACGACATTAA+TGG | + | chr3_3:1637998-1638017 | Msa0437700:intron | 25.0% |
! | TTGAATTATCTTTAGCAAGT+AGG | + | chr3_3:1638038-1638057 | Msa0437700:intron | 25.0% |
! | ATTAATTGATTGCTTGTTTC+TGG | + | chr3_3:1638121-1638140 | Msa0437700:intron | 25.0% |
! | TTGCCAATAAAATATAGAGA+TGG | - | chr3_3:1638162-1638181 | None:intergenic | 25.0% |
! | CTTTATAAATGCTGAAGTAT+AGG | - | chr3_3:1638196-1638215 | None:intergenic | 25.0% |
! | CAGCATTTATAAAGTAGTTA+TGG | + | chr3_3:1638202-1638221 | Msa0437700:intron | 25.0% |
! | TATAAAGTAGTTATGGTTGT+TGG | + | chr3_3:1638209-1638228 | Msa0437700:intron | 25.0% |
! | AATTGATCTGAATAATATCC+AGG | + | chr3_3:1638701-1638720 | Msa0437700:three_prime_UTR | 25.0% |
!!! | GCATTGATAATCTTTTTCTA+TGG | + | chr3_3:1638797-1638816 | Msa0437700:three_prime_UTR | 25.0% |
! | ATGGCAAAATCTTCAAAATT+TGG | - | chr3_3:1638823-1638842 | None:intergenic | 25.0% |
! | TGGAAAGACAGAAAAAAAAA+AGG | - | chr3_3:1638909-1638928 | None:intergenic | 25.0% |
!!! | TTTTTTTTCTGTCTTTCCAT+TGG | + | chr3_3:1638910-1638929 | Msa0437700:three_prime_UTR | 25.0% |
! | GAATGTAAAAAATGTTAGGT+AGG | + | chr3_3:1638982-1639001 | Msa0437700:three_prime_UTR | 25.0% |
! | ATGTAAAAAATGTTAGGTAG+GGG | + | chr3_3:1638984-1639003 | Msa0437700:three_prime_UTR | 25.0% |
!! | ATGAAAATGTTTTCAGAAAC+CGG | + | chr3_3:1639011-1639030 | Msa0437700:three_prime_UTR | 25.0% |
TGGAGTAATCTAGTTATTGA+TGG | - | chr3_3:1634910-1634929 | None:intergenic | 30.0% | |
CTTCGGAGAAAAATAAAAGT+TGG | - | chr3_3:1634933-1634952 | None:intergenic | 30.0% | |
!! | GTTGGTAATAACAGAATGAA+AGG | - | chr3_3:1635021-1635040 | None:intergenic | 30.0% |
AATTCGATTGTTATGCTTGT+TGG | - | chr3_3:1635219-1635238 | None:intergenic | 30.0% | |
! | CGAGTTTAAGTTAGGTAAAA+TGG | + | chr3_3:1635437-1635456 | Msa0437700:CDS | 30.0% |
AAGAATGTTCAAGAAGGAAA+AGG | + | chr3_3:1635585-1635604 | Msa0437700:CDS | 30.0% | |
AGAATGTTCAAGAAGGAAAA+GGG | + | chr3_3:1635586-1635605 | Msa0437700:CDS | 30.0% | |
AAAAACGGGAATGAGTATAT+TGG | + | chr3_3:1635621-1635640 | Msa0437700:CDS | 30.0% | |
TATATTGGTGAATGGAAGAA+CGG | + | chr3_3:1635636-1635655 | Msa0437700:CDS | 30.0% | |
ATTTGTATTTGGGAATCTGA+TGG | + | chr3_3:1635909-1635928 | Msa0437700:CDS | 30.0% | |
!! | ATAATGTATCGGTGTTGAAT+AGG | + | chr3_3:1635964-1635983 | Msa0437700:CDS | 30.0% |
TGTAGTGTTCATTGTTTGTT+TGG | + | chr3_3:1636157-1636176 | Msa0437700:intron | 30.0% | |
GTAGTGTTCATTGTTTGTTT+GGG | + | chr3_3:1636158-1636177 | Msa0437700:intron | 30.0% | |
!! | TTGCATTAGTTCTGGATTTA+AGG | + | chr3_3:1636191-1636210 | Msa0437700:intron | 30.0% |
TCCTTCAAATCAAAATCACT+CGG | - | chr3_3:1636284-1636303 | None:intergenic | 30.0% | |
!! | TTGATTTGAAGGAGAAGTTT+TGG | + | chr3_3:1636291-1636310 | Msa0437700:CDS | 30.0% |
AGTTTCGTTCTTTACATTTC+TGG | + | chr3_3:1636542-1636561 | Msa0437700:intron | 30.0% | |
ACACAAGGAGAATAATGTTA+TGG | + | chr3_3:1636577-1636596 | Msa0437700:intron | 30.0% | |
GATTACATGTTAGCTATTTG+TGG | + | chr3_3:1636647-1636666 | Msa0437700:CDS | 30.0% | |
GATCATAAATCTGTCATCTT+GGG | - | chr3_3:1636732-1636751 | None:intergenic | 30.0% | |
TGATCATAAATCTGTCATCT+TGG | - | chr3_3:1636733-1636752 | None:intergenic | 30.0% | |
!! | GAGTTTTGTGACTAACTTAT+AGG | + | chr3_3:1636858-1636877 | Msa0437700:intron | 30.0% |
TCACTTGTGACAAAATTCTA+TGG | + | chr3_3:1636934-1636953 | Msa0437700:CDS | 30.0% | |
CACTTGTGACAAAATTCTAT+GGG | + | chr3_3:1636935-1636954 | Msa0437700:CDS | 30.0% | |
ACTTGTGACAAAATTCTATG+GGG | + | chr3_3:1636936-1636955 | Msa0437700:CDS | 30.0% | |
!! | TTGTTATTTAAACACAGACC+CGG | + | chr3_3:1637064-1637083 | Msa0437700:intron | 30.0% |
TTGTCTGGACAATTATATCA+AGG | - | chr3_3:1637353-1637372 | None:intergenic | 30.0% | |
CAGAACATATTTCAACTTAC+CGG | - | chr3_3:1637687-1637706 | None:intergenic | 30.0% | |
TGTATCATTGTGTTCCTTAA+AGG | + | chr3_3:1637851-1637870 | Msa0437700:intron | 30.0% | |
AATTATCTTTAGCAAGTAGG+TGG | + | chr3_3:1638041-1638060 | Msa0437700:intron | 30.0% | |
ATTATCTTTAGCAAGTAGGT+GGG | + | chr3_3:1638042-1638061 | Msa0437700:intron | 30.0% | |
!! | AGTAGGATTTTTCTTGTTTC+AGG | + | chr3_3:1638309-1638328 | Msa0437700:intron | 30.0% |
! | GTTTCAGGAAATCATTGATT+AGG | + | chr3_3:1638324-1638343 | Msa0437700:intron | 30.0% |
! | AGGAAATCATTGATTAGGTT+AGG | + | chr3_3:1638329-1638348 | Msa0437700:intron | 30.0% |
AATGTTGTCATGAATCATGA+TGG | + | chr3_3:1638665-1638684 | Msa0437700:three_prime_UTR | 30.0% | |
AAGAAAGCTCGAAATTGATT+CGG | + | chr3_3:1638725-1638744 | Msa0437700:three_prime_UTR | 30.0% | |
CAATAGACTGTTTGATTAAC+AGG | + | chr3_3:1638769-1638788 | Msa0437700:three_prime_UTR | 30.0% | |
! | TGAAGATTTTGCCATAATGA+TGG | + | chr3_3:1638828-1638847 | Msa0437700:three_prime_UTR | 30.0% |
TGATCTTTGTACATGAAAGA+TGG | + | chr3_3:1638868-1638887 | Msa0437700:three_prime_UTR | 30.0% | |
!!! | GAAAGTGTACAGTTCTTTTT+TGG | + | chr3_3:1639069-1639088 | Msa0437700:three_prime_UTR | 30.0% |
!! | TAGTGATTGGTGCTATTTAC+TGG | - | chr3_3:1634832-1634851 | None:intergenic | 35.0% |
! | GTAATCTAGTTATTGATGGC+TGG | - | chr3_3:1634906-1634925 | None:intergenic | 35.0% |
CGGAGAAAAATAAAAGTTGG+TGG | - | chr3_3:1634930-1634949 | None:intergenic | 35.0% | |
!! | GTTCTGCTTTGTTTCTACTT+CGG | - | chr3_3:1634950-1634969 | None:intergenic | 35.0% |
TGAAAGGAAATGAATCACTG+TGG | - | chr3_3:1635005-1635024 | None:intergenic | 35.0% | |
!!! | CATTTTTTTTTCCGGCAAAG+AGG | - | chr3_3:1635059-1635078 | None:intergenic | 35.0% |
!!! | GTGATTGACGCATTTTTTGA+AGG | - | chr3_3:1635098-1635117 | None:intergenic | 35.0% |
! | TTGTATTTTCCTGATCCGTT+TGG | - | chr3_3:1635321-1635340 | None:intergenic | 35.0% |
ACGGATCAGGAAAATACAAA+TGG | + | chr3_3:1635322-1635341 | Msa0437700:CDS | 35.0% | |
GGAAAATACAAATGGAACGA+TGG | + | chr3_3:1635330-1635349 | Msa0437700:CDS | 35.0% | |
TTAGGTAAAATGGAAGGTTC+TGG | + | chr3_3:1635447-1635466 | Msa0437700:CDS | 35.0% | |
GAGATATTTACAGTGGTTCA+TGG | + | chr3_3:1635490-1635509 | Msa0437700:CDS | 35.0% | |
TGGAGTTCCGATAGAAAAAA+CGG | + | chr3_3:1635510-1635529 | Msa0437700:CDS | 35.0% | |
TCCGATAGAAAAAACGGTTA+CGG | + | chr3_3:1635516-1635535 | Msa0437700:CDS | 35.0% | |
!!! | TCCGTAACCGTTTTTTCTAT+CGG | - | chr3_3:1635520-1635539 | None:intergenic | 35.0% |
!! | GGTAACGGAGATTATTATGA+AGG | + | chr3_3:1635552-1635571 | Msa0437700:CDS | 35.0% |
ACGGAGATTATTATGAAGGT+TGG | + | chr3_3:1635556-1635575 | Msa0437700:CDS | 35.0% | |
GAGATTATTATGAAGGTTGG+TGG | + | chr3_3:1635559-1635578 | Msa0437700:CDS | 35.0% | |
TGGAAGAAGAATGTTCAAGA+AGG | + | chr3_3:1635579-1635598 | Msa0437700:CDS | 35.0% | |
GGAATGAGTATATTGGTGAA+TGG | + | chr3_3:1635628-1635647 | Msa0437700:CDS | 35.0% | |
!! | TGGAAGAACGGTGTTATTAA+CGG | + | chr3_3:1635648-1635667 | Msa0437700:CDS | 35.0% |
TTGAATGGGAATCGTTATGA+AGG | + | chr3_3:1635690-1635709 | Msa0437700:CDS | 35.0% | |
GAATCGTTATGAAGGTGAAT+GGG | + | chr3_3:1635698-1635717 | Msa0437700:CDS | 35.0% | |
TATGAAGGTGAATGGGAAAA+TGG | + | chr3_3:1635705-1635724 | Msa0437700:CDS | 35.0% | |
! | TTGAATGGGAGTTTTTATCC+TGG | + | chr3_3:1635822-1635841 | Msa0437700:CDS | 35.0% |
!! | ATGATTTTGCTGTGACAATG+AGG | + | chr3_3:1635847-1635866 | Msa0437700:CDS | 35.0% |
! | TTGAAGGTGGAAAGGATTTT+GGG | + | chr3_3:1635883-1635902 | Msa0437700:CDS | 35.0% |
CGAAACTGCTTAATCTCTTT+GGG | - | chr3_3:1636014-1636033 | None:intergenic | 35.0% | |
TCGAAACTGCTTAATCTCTT+TGG | - | chr3_3:1636015-1636034 | None:intergenic | 35.0% | |
AAGAGATTAAGCAGTTTCGA+CGG | + | chr3_3:1636015-1636034 | Msa0437700:CDS | 35.0% | |
!!! | TTCTGGTTGTTTTGTTTCTG+AGG | + | chr3_3:1636040-1636059 | Msa0437700:CDS | 35.0% |
!!! | ACCGAGTGATTTTGATTTGA+AGG | + | chr3_3:1636280-1636299 | Msa0437700:CDS | 35.0% |
GTAATCTTAGATCCTTCAGA+AGG | - | chr3_3:1636326-1636345 | None:intergenic | 35.0% | |
! | ATTACTGCCCTATGGTTTTT+AGG | + | chr3_3:1636381-1636400 | Msa0437700:CDS | 35.0% |
GGCTATACCTAAAAACCATA+GGG | - | chr3_3:1636391-1636410 | None:intergenic | 35.0% | |
AGGCTATACCTAAAAACCAT+AGG | - | chr3_3:1636392-1636411 | None:intergenic | 35.0% | |
!!! | TAGCCTTTTTGTTTTTCACC+TGG | + | chr3_3:1636406-1636425 | Msa0437700:intron | 35.0% |
CTACCAGGTGAAAAACAAAA+AGG | - | chr3_3:1636412-1636431 | None:intergenic | 35.0% | |
CATTTCTTTAGCACTCACAT+AGG | + | chr3_3:1636443-1636462 | Msa0437700:intron | 35.0% | |
ATAGCTAACATGTAATCAGC+AGG | - | chr3_3:1636644-1636663 | None:intergenic | 35.0% | |
AGTGAAAAAATCCGAAGTCA+AGG | + | chr3_3:1636757-1636776 | Msa0437700:CDS | 35.0% | |
CCAAAAACAAACCTTGACTT+CGG | - | chr3_3:1636771-1636790 | None:intergenic | 35.0% | |
! | CATACTAGTTTGAACGAACA+CGG | - | chr3_3:1636816-1636835 | None:intergenic | 35.0% |
CGAACATGTTTCTCAATATG+AGG | + | chr3_3:1636909-1636928 | Msa0437700:CDS | 35.0% | |
GTACATTGTGTCAAACCAAT+TGG | + | chr3_3:1636958-1636977 | Msa0437700:CDS | 35.0% | |
AAGTCAAATCGTCTATGGAT+TGG | - | chr3_3:1637126-1637145 | None:intergenic | 35.0% | |
!! | CATAGACGATTTGACTTGAA+GGG | + | chr3_3:1637129-1637148 | Msa0437700:CDS | 35.0% |
GAAACACAAAATTGAGATCG+AGG | - | chr3_3:1637221-1637240 | None:intergenic | 35.0% | |
CTTTGAACCAATTTCTTTGC+AGG | - | chr3_3:1637245-1637264 | None:intergenic | 35.0% | |
AATTGTCCAGACAAATTGAG+AGG | + | chr3_3:1637359-1637378 | Msa0437700:intron | 35.0% | |
ATTGTCCAGACAAATTGAGA+GGG | + | chr3_3:1637360-1637379 | Msa0437700:intron | 35.0% | |
TTTGGAAGCTGAAGGAATTA+TGG | + | chr3_3:1637393-1637412 | Msa0437700:CDS | 35.0% | |
!! | ATGGATTACAGTCTTTTGGT+CGG | + | chr3_3:1637412-1637431 | Msa0437700:CDS | 35.0% |
CATCTACAATATGCACAGAA+AGG | - | chr3_3:1637519-1637538 | None:intergenic | 35.0% | |
AAGAGTCATGCTTTCCTAAA+AGG | - | chr3_3:1637588-1637607 | None:intergenic | 35.0% | |
! | CGGTAAGTTGAAATATGTTC+TGG | + | chr3_3:1637685-1637704 | Msa0437700:intron | 35.0% |
ACCACATCCATAGTTTAAGT+GGG | + | chr3_3:1637757-1637776 | Msa0437700:intron | 35.0% | |
GTAACTACCCACTTAAACTA+TGG | - | chr3_3:1637767-1637786 | None:intergenic | 35.0% | |
TCTATCACTGTGTTCCATAA+AGG | + | chr3_3:1637892-1637911 | Msa0437700:intron | 35.0% | |
TACAACATCTCACTCCTTTA+TGG | - | chr3_3:1637909-1637928 | None:intergenic | 35.0% | |
ATAAAGGAGTGAGATGTTGT+AGG | + | chr3_3:1637908-1637927 | Msa0437700:intron | 35.0% | |
! | ATTTTACTCCTTGTCGCATT+GGG | + | chr3_3:1638429-1638448 | Msa0437700:CDS | 35.0% |
AAGAGGTTTCGTGATTTCTT+GGG | + | chr3_3:1638593-1638612 | Msa0437700:CDS | 35.0% | |
! | TAGCATCGAGTATGAAACAA+AGG | + | chr3_3:1638638-1638657 | Msa0437700:exon | 35.0% |
! | AGAAAGCTCGAAATTGATTC+GGG | + | chr3_3:1638726-1638745 | Msa0437700:three_prime_UTR | 35.0% |
ACTGTTTGATTAACAGGCTA+TGG | + | chr3_3:1638775-1638794 | Msa0437700:three_prime_UTR | 35.0% | |
TCTTTGTACATGAAAGATGG+TGG | + | chr3_3:1638871-1638890 | Msa0437700:three_prime_UTR | 35.0% | |
! | TTTTCTGTCTTTCCATTGGT+TGG | + | chr3_3:1638914-1638933 | Msa0437700:three_prime_UTR | 35.0% |
! | TTTCTGTCTTTCCATTGGTT+GGG | + | chr3_3:1638915-1638934 | Msa0437700:three_prime_UTR | 35.0% |
GATATAAGAGAGAGAGAGAG+AGG | - | chr3_3:1634859-1634878 | None:intergenic | 40.0% | |
AGCTCAGAAAAGAAGTCAGA+AGG | - | chr3_3:1634881-1634900 | None:intergenic | 40.0% | |
!! | TGCTTGTTGGTGAGATTTTC+CGG | - | chr3_3:1635206-1635225 | None:intergenic | 40.0% |
!! | ATGCTTTTTGGCGGTTCTTT+TGG | - | chr3_3:1635250-1635269 | None:intergenic | 40.0% |
!! | GTTGGGTAAATGCTTTTTGG+CGG | - | chr3_3:1635259-1635278 | None:intergenic | 40.0% |
!! | GCCAAAAAGCATTTACCCAA+CGG | + | chr3_3:1635258-1635277 | Msa0437700:CDS | 40.0% |
! | ACCGTTGGGTAAATGCTTTT+TGG | - | chr3_3:1635262-1635281 | None:intergenic | 40.0% |
AACGATGGTTGTATCTACGA+AGG | + | chr3_3:1635345-1635364 | Msa0437700:CDS | 40.0% | |
GTTGTATCTACGAAGGTGAA+TGG | + | chr3_3:1635352-1635371 | Msa0437700:CDS | 40.0% | |
! | CCACGAGAATTTTCCATTTC+CGG | - | chr3_3:1635394-1635413 | None:intergenic | 40.0% |
CCTTCGTAAATAGAACCTGA+AGG | - | chr3_3:1635417-1635436 | None:intergenic | 40.0% | |
! | CCTTCAGGTTCTATTTACGA+AGG | + | chr3_3:1635414-1635433 | Msa0437700:CDS | 40.0% |
! | TACGAAGGCGAGTTTAAGTT+AGG | + | chr3_3:1635429-1635448 | Msa0437700:CDS | 40.0% |
!!! | GAAGGTTCTGGAACTTTTAC+TGG | + | chr3_3:1635459-1635478 | Msa0437700:CDS | 40.0% |
ACCACTGTAAATATCTCCGT+CGG | - | chr3_3:1635487-1635506 | None:intergenic | 40.0% | |
GGTTACGGAAAGAAACGTTA+CGG | + | chr3_3:1635531-1635550 | Msa0437700:CDS | 40.0% | |
GGAAAGAAACGTTACGGTAA+CGG | + | chr3_3:1635537-1635556 | Msa0437700:CDS | 40.0% | |
ATGTTCAAGAAGGAAAAGGG+AGG | + | chr3_3:1635589-1635608 | Msa0437700:CDS | 40.0% | |
! | AAGGAAAAGGGAGGTATGTT+TGG | + | chr3_3:1635598-1635617 | Msa0437700:CDS | 40.0% |
! | GGGAGGTATGTTTGGAAAAA+CGG | + | chr3_3:1635606-1635625 | Msa0437700:CDS | 40.0% |
! | GGAGGTATGTTTGGAAAAAC+GGG | + | chr3_3:1635607-1635626 | Msa0437700:CDS | 40.0% |
!! | AACGGTGTTATTAACGGAAG+AGG | + | chr3_3:1635654-1635673 | Msa0437700:CDS | 40.0% |
GAACGCTTGTTTGGTTGAAT+GGG | + | chr3_3:1635676-1635695 | Msa0437700:CDS | 40.0% | |
GGAATCGTTATGAAGGTGAA+TGG | + | chr3_3:1635697-1635716 | Msa0437700:CDS | 40.0% | |
CTGATGGAAGTTGCTATGTT+GGG | + | chr3_3:1635760-1635779 | Msa0437700:CDS | 40.0% | |
GAAGTTGCTATGTTGGGAAT+TGG | + | chr3_3:1635766-1635785 | Msa0437700:CDS | 40.0% | |
!!! | AGGAAGAGGTGTTTTGTTGA+AGG | + | chr3_3:1635867-1635886 | Msa0437700:CDS | 40.0% |
!!! | AAGAGGTGTTTTGTTGAAGG+TGG | + | chr3_3:1635870-1635889 | Msa0437700:CDS | 40.0% |
!! | GTGTTTTGTTGAAGGTGGAA+AGG | + | chr3_3:1635875-1635894 | Msa0437700:CDS | 40.0% |
! | GTTGAAGGTGGAAAGGATTT+TGG | + | chr3_3:1635882-1635901 | Msa0437700:CDS | 40.0% |
! | TGGGAATCTGATGGTGAAAA+AGG | + | chr3_3:1635918-1635937 | Msa0437700:CDS | 40.0% |
!! | GTATCGGTGTTGAATAGGAT+TGG | + | chr3_3:1635969-1635988 | Msa0437700:CDS | 40.0% |
!! | TGTTTCTGAGGTTAAGAGAC+CGG | + | chr3_3:1636052-1636071 | Msa0437700:CDS | 40.0% |
ACCGGGTGAAACTATATGTA+AGG | + | chr3_3:1636070-1636089 | Msa0437700:CDS | 40.0% | |
CCCTTACATATAGTTTCACC+CGG | - | chr3_3:1636074-1636093 | None:intergenic | 40.0% | |
CCGGGTGAAACTATATGTAA+GGG | + | chr3_3:1636071-1636090 | Msa0437700:CDS | 40.0% | |
CGGGTGAAACTATATGTAAG+GGG | + | chr3_3:1636072-1636091 | Msa0437700:CDS | 40.0% | |
TGTATTTGTAGGCACTCTGT+TGG | + | chr3_3:1636227-1636246 | Msa0437700:intron | 40.0% | |
!!! | TGAAGGAGAAGTTTTGGACT+AGG | + | chr3_3:1636297-1636316 | Msa0437700:CDS | 40.0% |
! | GCAACATTTGATTTCGTCGA+AGG | + | chr3_3:1636465-1636484 | Msa0437700:intron | 40.0% |
TGGTCAGCCTAATTAACACA+AGG | + | chr3_3:1636562-1636581 | Msa0437700:intron | 40.0% | |
ACAATTGAGGAAGCGATTTC+AGG | + | chr3_3:1636613-1636632 | Msa0437700:CDS | 40.0% | |
!! | CCGAAGTCAAGGTTTGTTTT+TGG | + | chr3_3:1636768-1636787 | Msa0437700:intron | 40.0% |
CATTGTGTCAAACCAATTGG+AGG | + | chr3_3:1636961-1636980 | Msa0437700:CDS | 40.0% | |
! | TTCAACAAAGGCATACCTTC+TGG | - | chr3_3:1636987-1637006 | None:intergenic | 40.0% |
!!! | GATGGGCAATCTTTTTTGCT+CGG | + | chr3_3:1637095-1637114 | Msa0437700:CDS | 40.0% |
CCTTCAAGTCAAATCGTCTA+TGG | - | chr3_3:1637131-1637150 | None:intergenic | 40.0% | |
!! | CCATAGACGATTTGACTTGA+AGG | + | chr3_3:1637128-1637147 | Msa0437700:CDS | 40.0% |
! | CTTCAGTCTTATCTGTCGTA+CGG | - | chr3_3:1637167-1637186 | None:intergenic | 40.0% |
ATTGAGATCGAGGTCTTTGA+GGG | - | chr3_3:1637211-1637230 | None:intergenic | 40.0% | |
AATTGAGATCGAGGTCTTTG+AGG | - | chr3_3:1637212-1637231 | None:intergenic | 40.0% | |
TGTTTCGCCTGCAAAGAAAT+TGG | + | chr3_3:1637235-1637254 | Msa0437700:CDS | 40.0% | |
ACAATCCCTCTCAATTTGTC+TGG | - | chr3_3:1637368-1637387 | None:intergenic | 40.0% | |
!!! | TCACCATTTTTTTTGCGCAC+TGG | + | chr3_3:1637478-1637497 | Msa0437700:CDS | 40.0% |
GTACCAGTGCGCAAAAAAAA+TGG | - | chr3_3:1637484-1637503 | None:intergenic | 40.0% | |
CAGAGTGAAAAGTTTATGCG+TGG | + | chr3_3:1637610-1637629 | Msa0437700:CDS | 40.0% | |
CACCACATCCATAGTTTAAG+TGG | + | chr3_3:1637756-1637775 | Msa0437700:intron | 40.0% | |
ACCCACTTAAACTATGGATG+TGG | - | chr3_3:1637761-1637780 | None:intergenic | 40.0% | |
TACAGCATCTCACTCCTTTA+AGG | - | chr3_3:1637868-1637887 | None:intergenic | 40.0% | |
TTAAAGGAGTGAGATGCTGT+AGG | + | chr3_3:1637867-1637886 | Msa0437700:intron | 40.0% | |
TAGGTGGGAATAATGTAGAG+CGG | + | chr3_3:1638057-1638076 | Msa0437700:intron | 40.0% | |
GAATAATGTAGAGCGGGAAA+CGG | + | chr3_3:1638064-1638083 | Msa0437700:intron | 40.0% | |
ATTAATTAGGACCACGACCT+GGG | - | chr3_3:1638107-1638126 | None:intergenic | 40.0% | |
AATTAATTAGGACCACGACC+TGG | - | chr3_3:1638108-1638127 | None:intergenic | 40.0% | |
TTTGACCAATACACCAGTCT+TGG | + | chr3_3:1638398-1638417 | Msa0437700:CDS | 40.0% | |
TTGACCAATACACCAGTCTT+GGG | + | chr3_3:1638399-1638418 | Msa0437700:CDS | 40.0% | |
CAATGCGACAAGGAGTAAAA+TGG | - | chr3_3:1638430-1638449 | None:intergenic | 40.0% | |
! | CATTTTACTCCTTGTCGCAT+TGG | + | chr3_3:1638428-1638447 | Msa0437700:CDS | 40.0% |
! | TTTTACTCCTTGTCGCATTG+GGG | + | chr3_3:1638430-1638449 | Msa0437700:CDS | 40.0% |
!! | CGAGTAAAGCTTTGGATCAA+CGG | - | chr3_3:1638573-1638592 | None:intergenic | 40.0% |
ATCCAAAGCTTTACTCGAAG+AGG | + | chr3_3:1638576-1638595 | Msa0437700:CDS | 40.0% | |
AACCTCTTCGAGTAAAGCTT+TGG | - | chr3_3:1638581-1638600 | None:intergenic | 40.0% | |
GAAGAGGTTTCGTGATTTCT+TGG | + | chr3_3:1638592-1638611 | Msa0437700:CDS | 40.0% | |
AGAGGTTTCGTGATTTCTTG+GGG | + | chr3_3:1638594-1638613 | Msa0437700:CDS | 40.0% | |
TGTTTCATACTCGATGCTAC+CGG | - | chr3_3:1638637-1638656 | None:intergenic | 40.0% | |
CAATTTCGAGCTTTCTTTCC+TGG | - | chr3_3:1638722-1638741 | None:intergenic | 40.0% | |
!! | ATTGATTCGGGTGTTGGAAT+TGG | + | chr3_3:1638738-1638757 | Msa0437700:three_prime_UTR | 40.0% |
CCTTCAGTGAACCATCATTA+TGG | - | chr3_3:1638842-1638861 | None:intergenic | 40.0% | |
CCATAATGATGGTTCACTGA+AGG | + | chr3_3:1638839-1638858 | Msa0437700:three_prime_UTR | 40.0% | |
AATCTACACATCCCAACCAA+TGG | - | chr3_3:1638929-1638948 | None:intergenic | 40.0% | |
GTTGGGATGTGTAGATTCTT+TGG | + | chr3_3:1638932-1638951 | Msa0437700:three_prime_UTR | 40.0% | |
! | AAGTAAAGTATCCGCGCATT+TGG | - | chr3_3:1639040-1639059 | None:intergenic | 40.0% |
AAATGCGCGGATACTTTACT+TGG | + | chr3_3:1639039-1639058 | Msa0437700:three_prime_UTR | 40.0% | |
! | AGAGAGAGGTGCATAGTGAT+TGG | - | chr3_3:1634845-1634864 | None:intergenic | 45.0% |
!! | AGGAGAGGAAAGTGTTGTGT+TGG | - | chr3_3:1635039-1635058 | None:intergenic | 45.0% |
!!! | TTTTTTCCGGCAAAGAGGAG+AGG | - | chr3_3:1635054-1635073 | None:intergenic | 45.0% |
ACCCAACGGTGATTCTTACA+TGG | + | chr3_3:1635272-1635291 | Msa0437700:CDS | 45.0% | |
CCCATGTAAGAATCACCGTT+GGG | - | chr3_3:1635276-1635295 | None:intergenic | 45.0% | |
CCCAACGGTGATTCTTACAT+GGG | + | chr3_3:1635273-1635292 | Msa0437700:CDS | 45.0% | |
TCCCATGTAAGAATCACCGT+TGG | - | chr3_3:1635277-1635296 | None:intergenic | 45.0% | |
TCTTACATGGGAACCTTCTC+CGG | + | chr3_3:1635285-1635304 | Msa0437700:CDS | 45.0% | |
AACAACACACCAAACGGATC+AGG | + | chr3_3:1635309-1635328 | Msa0437700:CDS | 45.0% | |
TACGAAGGTGAATGGAAACG+AGG | + | chr3_3:1635360-1635379 | Msa0437700:CDS | 45.0% | |
TGGAAACGAGGAAAAGCTTC+CGG | + | chr3_3:1635372-1635391 | Msa0437700:CDS | 45.0% | |
CCGGAAATGGAAAATTCTCG+TGG | + | chr3_3:1635391-1635410 | Msa0437700:CDS | 45.0% | |
! | GGAACTTTTACTGGATCCGA+CGG | + | chr3_3:1635468-1635487 | Msa0437700:CDS | 45.0% |
TCCGACGGAGATATTTACAG+TGG | + | chr3_3:1635483-1635502 | Msa0437700:CDS | 45.0% | |
GGAACGCTTGTTTGGTTGAA+TGG | + | chr3_3:1635675-1635694 | Msa0437700:CDS | 45.0% | |
TGGGAAAATGGTGTTCCGAA+AGG | + | chr3_3:1635717-1635736 | Msa0437700:CDS | 45.0% | |
GGGAAAATGGTGTTCCGAAA+GGG | + | chr3_3:1635718-1635737 | Msa0437700:CDS | 45.0% | |
GTAAACACACCTTGCCCTTT+CGG | - | chr3_3:1635735-1635754 | None:intergenic | 45.0% | |
AAGGGCAAGGTGTGTTTACT+TGG | + | chr3_3:1635736-1635755 | Msa0437700:CDS | 45.0% | |
CCAACATAGCAACTTCCATC+AGG | - | chr3_3:1635762-1635781 | None:intergenic | 45.0% | |
CCTGATGGAAGTTGCTATGT+TGG | + | chr3_3:1635759-1635778 | Msa0437700:CDS | 45.0% | |
GTCACAGCAAAATCATCACC+AGG | - | chr3_3:1635843-1635862 | None:intergenic | 45.0% | |
TTGCTGTGACAATGAGGAAG+AGG | + | chr3_3:1635853-1635872 | Msa0437700:CDS | 45.0% | |
AAGCAGTTTCGACGGAATTC+TGG | + | chr3_3:1636023-1636042 | Msa0437700:CDS | 45.0% | |
!! | GTTTCTGAGGTTAAGAGACC+GGG | + | chr3_3:1636053-1636072 | Msa0437700:CDS | 45.0% |
TTGTAGGCACTCTGTTGGAA+AGG | + | chr3_3:1636232-1636251 | Msa0437700:intron | 45.0% | |
! | TGGACTAGGTTTCCTTCTGA+AGG | + | chr3_3:1636311-1636330 | Msa0437700:CDS | 45.0% |
! | AACTCCATCGATTGATGTGG+TGG | - | chr3_3:1636350-1636369 | None:intergenic | 45.0% |
ATCAATCGATGGAGTTCCGT+TGG | + | chr3_3:1636354-1636373 | Msa0437700:CDS | 45.0% | |
TAGGGCAGTAATCCTTCCAA+CGG | - | chr3_3:1636373-1636392 | None:intergenic | 45.0% | |
TTGGAAGGATTACTGCCCTA+TGG | + | chr3_3:1636373-1636392 | Msa0437700:CDS | 45.0% | |
ATTGAGGAAGCGATTTCAGG+TGG | + | chr3_3:1636616-1636635 | Msa0437700:CDS | 45.0% | |
CTTTCATCTCCTGGCAAAAG+TGG | + | chr3_3:1636689-1636708 | Msa0437700:CDS | 45.0% | |
!! | AAGAAGCTTCCACTTTTGCC+AGG | - | chr3_3:1636701-1636720 | None:intergenic | 45.0% |
GGGTTTAGTCTACGATTTGC+AGG | + | chr3_3:1637028-1637047 | Msa0437700:intron | 45.0% | |
! | TGAGAGGGATTGTGCGTTTT+TGG | + | chr3_3:1637375-1637394 | Msa0437700:CDS | 45.0% |
!! | TGTGCGTTTTTGGAAGCTGA+AGG | + | chr3_3:1637385-1637404 | Msa0437700:CDS | 45.0% |
! | TGTCTTGTAGCTCTGCTTCA+AGG | - | chr3_3:1637645-1637664 | None:intergenic | 45.0% |
TTGAAGCAGAGCTACAAGAC+AGG | + | chr3_3:1637644-1637663 | Msa0437700:CDS | 45.0% | |
TGAAGCAGAGCTACAAGACA+GGG | + | chr3_3:1637645-1637664 | Msa0437700:CDS | 45.0% | |
GACAGGGATAGAGTCAAATC+TGG | + | chr3_3:1637661-1637680 | Msa0437700:CDS | 45.0% | |
TGATACAAGCCTCTCTTCTC+AGG | - | chr3_3:1637838-1637857 | None:intergenic | 45.0% | |
AGGTGGGAATAATGTAGAGC+GGG | + | chr3_3:1638058-1638077 | Msa0437700:intron | 45.0% | |
TGCATAGCTGCAACTCTGTT+TGG | + | chr3_3:1638245-1638264 | Msa0437700:intron | 45.0% | |
GCATAGCTGCAACTCTGTTT+GGG | + | chr3_3:1638246-1638265 | Msa0437700:intron | 45.0% | |
TGCAACTCTGTTTGGGAGTA+AGG | + | chr3_3:1638253-1638272 | Msa0437700:intron | 45.0% | |
TCATCCCAAGACTGGTGTAT+TGG | - | chr3_3:1638406-1638425 | None:intergenic | 45.0% | |
AAAATGGCTCATCCCAAGAC+TGG | - | chr3_3:1638414-1638433 | None:intergenic | 45.0% | |
TTACGACATCAGCAAGAAGC+TGG | + | chr3_3:1638502-1638521 | Msa0437700:CDS | 45.0% | |
TCAACGGCTGAGATTGATGA+AGG | - | chr3_3:1638557-1638576 | None:intergenic | 45.0% | |
CTTGGGGAGAATATTCAGTG+AGG | + | chr3_3:1638610-1638629 | Msa0437700:CDS | 45.0% | |
GGAGAATATTCAGTGAGGAC+CGG | + | chr3_3:1638615-1638634 | Msa0437700:CDS | 45.0% | |
!! | CTCGAAATTGATTCGGGTGT+TGG | + | chr3_3:1638732-1638751 | Msa0437700:three_prime_UTR | 45.0% |
ATGATGGTTCACTGAAGGCA+AGG | + | chr3_3:1638844-1638863 | Msa0437700:three_prime_UTR | 45.0% | |
TGATGGTTCACTGAAGGCAA+GGG | + | chr3_3:1638845-1638864 | Msa0437700:three_prime_UTR | 45.0% | |
CACTTTCCTCTCCTCTTTGC+CGG | + | chr3_3:1635045-1635064 | Msa0437700:five_prime_UTR | 50.0% | |
TCCGGCAACAACACACCAAA+CGG | + | chr3_3:1635303-1635322 | Msa0437700:CDS | 50.0% | |
!! | TCCGTTTGGTGTGTTGTTGC+CGG | - | chr3_3:1635307-1635326 | None:intergenic | 50.0% |
CGAGGAAAAGCTTCCGGAAA+TGG | + | chr3_3:1635378-1635397 | Msa0437700:CDS | 50.0% | |
GGAAAATTCTCGTGGCCTTC+AGG | + | chr3_3:1635399-1635418 | Msa0437700:CDS | 50.0% | |
ACGGAAGAGGAACGCTTGTT+TGG | + | chr3_3:1635667-1635686 | Msa0437700:CDS | 50.0% | |
AATGGTGTTCCGAAAGGGCA+AGG | + | chr3_3:1635723-1635742 | Msa0437700:CDS | 50.0% | |
GGTGTGTTTACTTGGCCTGA+TGG | + | chr3_3:1635744-1635763 | Msa0437700:CDS | 50.0% | |
TACGCCACCACATCAATCGA+TGG | + | chr3_3:1636343-1636362 | Msa0437700:CDS | 50.0% | |
! | CGGAACTCCATCGATTGATG+TGG | - | chr3_3:1636353-1636372 | None:intergenic | 50.0% |
ATCGATGGAGTTCCGTTGGA+AGG | + | chr3_3:1636358-1636377 | Msa0437700:CDS | 50.0% | |
TTTGTGGAAATGCTGCCCTC+AGG | + | chr3_3:1636663-1636682 | Msa0437700:CDS | 50.0% | |
TTGTGGAAATGCTGCCCTCA+GGG | + | chr3_3:1636664-1636683 | Msa0437700:CDS | 50.0% | |
AGGAGATGAAAGCTCCCTGA+GGG | - | chr3_3:1636681-1636700 | None:intergenic | 50.0% | |
CAAACCAATTGGAGGCCAGA+AGG | + | chr3_3:1636969-1636988 | Msa0437700:CDS | 50.0% | |
CATACCTTCTGGCCTCCAAT+TGG | - | chr3_3:1636976-1636995 | None:intergenic | 50.0% | |
ATTGCCCATCACGATGAACC+GGG | - | chr3_3:1637085-1637104 | None:intergenic | 50.0% | |
GATTGCCCATCACGATGAAC+CGG | - | chr3_3:1637086-1637105 | None:intergenic | 50.0% | |
GACTTGAAGGGATCGTCACA+TGG | + | chr3_3:1637141-1637160 | Msa0437700:CDS | 50.0% | |
GGGATAGAGTCAAATCTGGC+CGG | + | chr3_3:1637665-1637684 | Msa0437700:CDS | 50.0% | |
GTCGAAGAACCTGAGAAGAG+AGG | + | chr3_3:1637826-1637845 | Msa0437700:intron | 50.0% | |
AGCGGGAAACGGTTGTTTGT+GGG | + | chr3_3:1638075-1638094 | Msa0437700:intron | 50.0% | |
GCATGCATACAAGTCACTGC+AGG | + | chr3_3:1638526-1638545 | Msa0437700:CDS | 50.0% | |
GAAACCGGAATCCAAATGCG+CGG | + | chr3_3:1639026-1639045 | Msa0437700:three_prime_UTR | 50.0% | |
GTATCCGCGCATTTGGATTC+CGG | - | chr3_3:1639033-1639052 | None:intergenic | 50.0% | |
!! | CTGAGGAGGAGGTGTTGTTG+TGG | - | chr3_3:1635131-1635150 | None:intergenic | 55.0% |
TGCTGAAGTGTGACCGGGTA+CGG | - | chr3_3:1635182-1635201 | None:intergenic | 55.0% | |
! | TGGTGTGTTGTTGCCGGAGA+AGG | - | chr3_3:1635301-1635320 | None:intergenic | 55.0% |
CAGGAGATGAAAGCTCCCTG+AGG | - | chr3_3:1636682-1636701 | None:intergenic | 55.0% | |
CTCAGGGAGCTTTCATCTCC+TGG | + | chr3_3:1636680-1636699 | Msa0437700:CDS | 55.0% | |
ACAGACCCGGTTCATCGTGA+TGG | + | chr3_3:1637077-1637096 | Msa0437700:intron | 55.0% | |
CAGACCCGGTTCATCGTGAT+GGG | + | chr3_3:1637078-1637097 | Msa0437700:intron | 55.0% | |
! | GAGATCGAGGTCTTTGAGGG+TGG | - | chr3_3:1637208-1637227 | None:intergenic | 55.0% |
GAGCGGGAAACGGTTGTTTG+TGG | + | chr3_3:1638074-1638093 | Msa0437700:intron | 55.0% | |
GCGGGAAACGGTTGTTTGTG+GGG | + | chr3_3:1638076-1638095 | Msa0437700:intron | 55.0% | |
CGGGAAACGGTTGTTTGTGG+GGG | + | chr3_3:1638077-1638096 | Msa0437700:intron | 55.0% | |
! | TTGTTTGTGGGGGCATACCC+AGG | + | chr3_3:1638087-1638106 | Msa0437700:intron | 55.0% |
TAGGTCTCCCCAATGCGACA+AGG | - | chr3_3:1638440-1638459 | None:intergenic | 55.0% | |
GTACGGCCGGTGGTAGTAAC+CGG | - | chr3_3:1635165-1635184 | None:intergenic | 60.0% | |
TTACTACCACCGGCCGTACC+CGG | + | chr3_3:1635166-1635185 | Msa0437700:CDS | 60.0% | |
TCCGGCTGCTGAAGTGTGAC+CGG | - | chr3_3:1635188-1635207 | None:intergenic | 60.0% | |
CAAGAGCAGAGCGCATGGCT+CGG | + | chr3_3:1638366-1638385 | Msa0437700:CDS | 60.0% | |
CGGCTGTGAGTCTGAGGAGG+AGG | - | chr3_3:1635142-1635161 | None:intergenic | 65.0% | |
CTCCTCAGACTCACAGCCGC+CGG | + | chr3_3:1635143-1635162 | Msa0437700:CDS | 65.0% | |
AACCGGCGGCTGTGAGTCTG+AGG | - | chr3_3:1635148-1635167 | None:intergenic | 65.0% | |
! | CAGCCGCCGGTTACTACCAC+CGG | + | chr3_3:1635156-1635175 | Msa0437700:CDS | 65.0% |
GAAGTGTGACCGGGTACGGC+CGG | - | chr3_3:1635178-1635197 | None:intergenic | 65.0% | |
CCGGCTGCTGAAGTGTGACC+GGG | - | chr3_3:1635187-1635206 | None:intergenic | 65.0% | |
CCCGGTCACACTTCAGCAGC+CGG | + | chr3_3:1635184-1635203 | Msa0437700:CDS | 65.0% | |
GCCAGCAAGAGCAGAGCGCA+TGG | + | chr3_3:1638361-1638380 | Msa0437700:CDS | 65.0% | |
GCCATGCGCTCTGCTCTTGC+TGG | - | chr3_3:1638365-1638384 | None:intergenic | 65.0% | |
CGGCGGCTGTGAGTCTGAGG+AGG | - | chr3_3:1635145-1635164 | None:intergenic | 70.0% | |
CGGCCGGTGGTAGTAACCGG+CGG | - | chr3_3:1635162-1635181 | None:intergenic | 70.0% | |
! | GTGGGGGCATACCCAGGTCG+TGG | + | chr3_3:1638093-1638112 | Msa0437700:intron | 70.0% |
! | GAGCAGAGCGCATGGCTCGG+AGG | + | chr3_3:1638369-1638388 | Msa0437700:CDS | 70.0% |
GTGTGACCGGGTACGGCCGG+TGG | - | chr3_3:1635175-1635194 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 1634817 | 1639109 | 1634817 | ID=Msa0437700;Name=Msa0437700 |
chr3_3 | mRNA | 1634817 | 1639109 | 1634817 | ID=Msa0437700-mRNA-1;Parent=Msa0437700;Name=Msa0437700-mRNA-1;_AED=0.07;_eAED=0.07;_QI=288|1|1|1|1|1|8|469|734 |
chr3_3 | exon | 1634817 | 1636138 | 1634817 | ID=Msa0437700-mRNA-1:exon:192;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1636238 | 1636402 | 1636238 | ID=Msa0437700-mRNA-1:exon:193;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1636613 | 1636778 | 1636613 | ID=Msa0437700-mRNA-1:exon:194;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1636880 | 1636990 | 1636880 | ID=Msa0437700-mRNA-1:exon:195;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1637081 | 1637274 | 1637081 | ID=Msa0437700-mRNA-1:exon:196;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1637369 | 1637499 | 1637369 | ID=Msa0437700-mRNA-1:exon:197;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1637593 | 1637686 | 1637593 | ID=Msa0437700-mRNA-1:exon:198;Parent=Msa0437700-mRNA-1 |
chr3_3 | exon | 1638331 | 1639109 | 1638331 | ID=Msa0437700-mRNA-1:exon:199;Parent=Msa0437700-mRNA-1 |
chr3_3 | five_prime_UTR | 1634817 | 1635104 | 1634817 | ID=Msa0437700-mRNA-1:five_prime_utr;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1635105 | 1636138 | 1635105 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1636238 | 1636402 | 1636238 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1636613 | 1636778 | 1636613 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1636880 | 1636990 | 1636880 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1637081 | 1637274 | 1637081 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1637369 | 1637499 | 1637369 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1637593 | 1637686 | 1637593 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | CDS | 1638331 | 1638640 | 1638331 | ID=Msa0437700-mRNA-1:cds;Parent=Msa0437700-mRNA-1 |
chr3_3 | three_prime_UTR | 1638641 | 1639109 | 1638641 | ID=Msa0437700-mRNA-1:three_prime_utr;Parent=Msa0437700-mRNA-1 |
Gene Sequence |
Protein sequence |