AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1211930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211930 MtrunA17_Chr4g0060791 98.918 462 5 0 1 462 1 462 0.0 942
Msa1211930 MtrunA17_Chr5g0440511 62.700 437 154 4 27 460 18 448 0.0 561
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211930 AT1G74470.1 83.226 465 74 2 2 462 3 467 0.0 776

Find 193 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAATATGCTATTGCATTTC+AGG 0.142330 8_1:-71764421 Msa1211930:intron
GATTTCATGTGGATAGATTT+TGG 0.169020 8_1:+71765244 None:intergenic
CGGCGGTGGGAGATGGGTTT+GGG 0.176192 8_1:+71765011 None:intergenic
TAGGAGAATTGGGTGGTTTC+TGG 0.183189 8_1:+71765038 None:intergenic
ACAGCAACATGGTCACATTT+TGG 0.197386 8_1:+71763695 None:intergenic
AGGGGATTTGAGGAAATATT+TGG 0.198675 8_1:-71763381 Msa1211930:CDS
TTGTGATTTGTGGGAGTTTA+TGG 0.214340 8_1:+71765193 None:intergenic
GCGGCGGTGGGAGATGGGTT+TGG 0.244292 8_1:+71765010 None:intergenic
CTCCAATCACCAGTCTATAT+TGG 0.255864 8_1:+71762957 None:intergenic
CTTCCTCATCGAACGTAAAA+TGG 0.256761 8_1:-71764859 Msa1211930:CDS
TTGGCCTACTTATAAGGTTT+TGG 0.265070 8_1:-71763339 Msa1211930:CDS
GACATATTGGCCTACTTATA+AGG 0.266128 8_1:-71763345 Msa1211930:CDS
TGAGGAAATATTTGGAGAAA+TGG 0.276745 8_1:-71763373 Msa1211930:CDS
GAATTTGCGGCGGTGGGAGA+TGG 0.294183 8_1:+71765004 None:intergenic
AGAGCCGAGGACAAGATCTT+AGG 0.294607 8_1:-71763611 Msa1211930:CDS
TTGATGATTATCTTAGAAAT+AGG 0.295715 8_1:-71764653 Msa1211930:CDS
TTGGAAGTTGATGCTGTTAT+TGG 0.299811 8_1:-71764495 Msa1211930:CDS
GTTTGGGGCGGTAGGAGAAT+TGG 0.301030 8_1:+71765027 None:intergenic
CTTCGTGGCCTTGGATGTTC+TGG 0.306980 8_1:+71763554 None:intergenic
AGAAATAGGGCTAAGGAAAA+TGG 0.307503 8_1:-71764639 Msa1211930:CDS
TCTGCTGCTGCACCACCTGC+TGG 0.311242 8_1:+71764909 None:intergenic
CCTGACAATCTTCGTGGCCT+TGG 0.325683 8_1:+71763545 None:intergenic
GACGTTTCTCCTGACTTCTA+TGG 0.335820 8_1:-71763728 Msa1211930:CDS
ACACCATTGGGAGCTTGGTT+AGG 0.343371 8_1:-71763160 Msa1211930:CDS
TCTTCTTATGATGGGAAAAC+TGG 0.344602 8_1:-71764540 Msa1211930:CDS
CTTCATTATTCTTCTTATGA+TGG 0.346960 8_1:-71764549 Msa1211930:CDS
GAATTTATGAGATTTGATTT+AGG 0.351328 8_1:-71762851 Msa1211930:three_prime_UTR
TTTGGGGCGGTAGGAGAATT+GGG 0.355885 8_1:+71765028 None:intergenic
GATTCCTTCTCCAGAACATT+TGG 0.359585 8_1:+71763484 None:intergenic
TGCGCACATCCTCCCACTCT+TGG 0.361852 8_1:+71763451 None:intergenic
GAGGAAATATTTGGAGAAAT+GGG 0.367293 8_1:-71763372 Msa1211930:CDS
GGCCTTGGATGTTCTGGTAT+AGG 0.367492 8_1:+71763560 None:intergenic
TTAAATATACCAATGATAAT+TGG 0.368524 8_1:-71762778 Msa1211930:three_prime_UTR
TGATGATTATCTTAGAAATA+GGG 0.374290 8_1:-71764652 Msa1211930:CDS
GCCTTGGATGTTCTGGTATA+GGG 0.379558 8_1:+71763561 None:intergenic
GTCAGGGAGGGTCGCGCTTG+TGG 0.383632 8_1:-71763528 Msa1211930:CDS
GCGCTTGTGGGTGATGCTGC+TGG 0.386839 8_1:-71763515 Msa1211930:CDS
GATAATTGGTCTAGTTGATA+AGG 0.388986 8_1:-71762764 Msa1211930:three_prime_UTR
TTCTCCTGACTTCTATGGTT+GGG 0.390021 8_1:-71763723 Msa1211930:CDS
CTTAAGTCTCATGAGTATAT+TGG 0.401506 8_1:-71764696 Msa1211930:CDS
TCCCTTGTGTGTCACAGTTC+CGG 0.402699 8_1:+71763667 None:intergenic
TCCAATCACCAGTCTATATT+GGG 0.403384 8_1:+71762958 None:intergenic
TGGATATGGTTTGTGATTTG+TGG 0.404759 8_1:+71765183 None:intergenic
CGACGGTGAATTTGCGGCGG+TGG 0.405841 8_1:+71764997 None:intergenic
GAGCCGAGGACAAGATCTTA+GGG 0.407230 8_1:-71763610 Msa1211930:CDS
CCAAGGCCACGAAGATTGTC+AGG 0.407730 8_1:-71763545 Msa1211930:CDS
CACCATTGGGAGCTTGGTTA+GGG 0.417891 8_1:-71763159 Msa1211930:CDS
GGCTACGTGACCAAATGTTC+TGG 0.417975 8_1:-71763494 Msa1211930:CDS
TGGTTAGGGCTAATGCTCTA+AGG 0.419103 8_1:-71763145 Msa1211930:CDS
AGAGGCAATTGTGCAGGGTT+CGG 0.420268 8_1:-71763429 Msa1211930:CDS
GGATATGGTTTGTGATTTGT+GGG 0.424823 8_1:+71765184 None:intergenic
TATCAACACCATTGGGAGCT+TGG 0.425273 8_1:-71763165 Msa1211930:CDS
AGTGAGGGAGTGAGGAATGA+GGG 0.428654 8_1:+71765123 None:intergenic
TCAACTAGACCAATTATCAT+TGG 0.432252 8_1:+71762769 None:intergenic
TGATAAATTAATATGTATAC+AGG 0.436388 8_1:+71763064 None:intergenic
TCAACAAAAGCTTCCCTAGC+AGG 0.436433 8_1:+71763284 None:intergenic
TTCATTATTCTTCTTATGAT+GGG 0.438606 8_1:-71764548 Msa1211930:CDS
ACTGGTGATTGGAGCATAGC+AGG 0.439829 8_1:-71762948 Msa1211930:three_prime_UTR
CTGTACAAGACTGTTGTGCC+TGG 0.441769 8_1:-71763215 Msa1211930:CDS
GAAGAATAATGAAGAACATA+AGG 0.446087 8_1:+71764558 None:intergenic
TGCATGTAGTATTTATCAGC+TGG 0.447435 8_1:-71762873 Msa1211930:three_prime_UTR
AATTATCTGTATAAGCAAAC+GGG 0.451639 8_1:-71762998 Msa1211930:three_prime_UTR
TAATTATCTGTATAAGCAAA+CGG 0.452033 8_1:-71762999 Msa1211930:three_prime_UTR
GGCGGTGGGAGATGGGTTTG+GGG 0.452723 8_1:+71765012 None:intergenic
AAAAGCTTCCCTAGCAGGAT+TGG 0.453043 8_1:+71763289 None:intergenic
TGGTTGAAGAAGGGGATTTG+AGG 0.453345 8_1:-71763391 Msa1211930:CDS
AGATATATATAACTAACATA+AGG 0.453444 8_1:+71762819 None:intergenic
AAGTGAGGGAGTGAGGAATG+AGG 0.454571 8_1:+71765122 None:intergenic
GGGAAGAGGATGGTTGAAGA+AGG 0.458022 8_1:-71763401 Msa1211930:CDS
GTCATCGGCGGTGGTCCAGC+AGG 0.459749 8_1:-71764924 Msa1211930:CDS
GATGGGAAAACTGGTGGGGT+TGG 0.460324 8_1:-71764531 Msa1211930:CDS
GGAAGAGGATGGTTGAAGAA+GGG 0.461222 8_1:-71763400 Msa1211930:CDS
AATTTGCGGCGGTGGGAGAT+GGG 0.462248 8_1:+71765005 None:intergenic
AACCTCCGTGTCGCTGTCAT+CGG 0.466562 8_1:-71764939 Msa1211930:CDS
AGAAATGGGACAAGACATAT+TGG 0.468367 8_1:-71763358 Msa1211930:CDS
CGGAGAAATCATCTTCATCT+TGG 0.469756 8_1:+71764749 None:intergenic
AATGGAGCGAATATTATCAA+TGG 0.469785 8_1:-71764621 Msa1211930:CDS
GGAGATGGGTTTGGGGCGGT+AGG 0.470092 8_1:+71765019 None:intergenic
TGAGGGAAAGTGAGGGAGTG+AGG 0.480797 8_1:+71765115 None:intergenic
TTGTGCAGGGTTCGGCGAAT+GGG 0.480844 8_1:-71763421 Msa1211930:CDS
GGAGGCCGAGGAAGGATTTG+AGG 0.485174 8_1:+71765072 None:intergenic
AATGGAGCTCATGGTGATTG+AGG 0.485588 8_1:+71765097 None:intergenic
GTGCGCAGAGGCAATTGTGC+AGG 0.486232 8_1:-71763435 Msa1211930:CDS
TGACAGCGACACGGAGGTTA+CGG 0.488882 8_1:+71764943 None:intergenic
ATTGTGCAGGGTTCGGCGAA+TGG 0.489244 8_1:-71763422 Msa1211930:CDS
CAGCAACGACGGTGAATTTG+CGG 0.490011 8_1:+71764991 None:intergenic
AATTAATATGTATACAGGTC+AGG 0.493949 8_1:+71763069 None:intergenic
ACCCTCCCTGACAATCTTCG+TGG 0.495621 8_1:+71763539 None:intergenic
TTTCTCCTGACTTCTATGGT+TGG 0.498525 8_1:-71763724 Msa1211930:CDS
GTGAGGAAATGCGGAGGCCG+AGG 0.498992 8_1:+71765060 None:intergenic
GAAGAGGATGGTTGAAGAAG+GGG 0.499187 8_1:-71763399 Msa1211930:CDS
TCCCAATATAGACTGGTGAT+TGG 0.500678 8_1:-71762959 Msa1211930:three_prime_UTR
GATATATATAACTAACATAA+GGG 0.500690 8_1:+71762820 None:intergenic
TTGTGGGAGTTTATGGCCGT+TGG 0.501989 8_1:+71765200 None:intergenic
GCCATTCCTCTCTGCATGGT+TGG 0.506344 8_1:-71764813 Msa1211930:CDS
TCGAATGTCGCCGTCGACAT+TGG 0.508885 8_1:-71764726 Msa1211930:CDS
ATGGAGCGAATATTATCAAT+GGG 0.512254 8_1:-71764620 Msa1211930:CDS
CATGCAATCCCAATATAGAC+TGG 0.523727 8_1:-71762966 Msa1211930:three_prime_UTR
CGTGTCGCTGTCATCGGCGG+TGG 0.524419 8_1:-71764933 Msa1211930:CDS
GAGGCCGAGGAAGGATTTGA+GGG 0.525450 8_1:+71765073 None:intergenic
ATCTATTTCGCAGCCAAGAG+TGG 0.527822 8_1:-71763464 Msa1211930:CDS
ATGGAGCTCATGGTGATTGA+GGG 0.528894 8_1:+71765098 None:intergenic
TGTTGTGCCTGGGAGTCCAT+TGG 0.531085 8_1:-71763204 Msa1211930:CDS
GATGCTGTTATTGGTGCTGA+TGG 0.532399 8_1:-71764486 Msa1211930:CDS
GACCATGTTGCTGTCGGCAC+CGG 0.535481 8_1:-71763686 Msa1211930:CDS
AGTTGGCTATCAACACCATT+GGG 0.537596 8_1:-71763172 Msa1211930:CDS
CTTATGATGGGAAAACTGGT+GGG 0.540873 8_1:-71764536 Msa1211930:CDS
GCAGCAGAAACACTAGCAAA+AGG 0.541139 8_1:-71764894 Msa1211930:CDS
TTTACAGGTCCAATCCTGCT+AGG 0.541349 8_1:-71763298 Msa1211930:CDS
GACTTATTACGAGGATCTTG+CGG 0.541408 8_1:-71763768 Msa1211930:CDS
AACACCCAACCATAGAAGTC+AGG 0.543879 8_1:+71763719 None:intergenic
CTCCGTGTCGCTGTCATCGG+CGG 0.543928 8_1:-71764936 Msa1211930:CDS
ATATCCTCCAATGGACTCCC+AGG 0.545006 8_1:+71763197 None:intergenic
TCTTATGATGGGAAAACTGG+TGG 0.545852 8_1:-71764537 Msa1211930:CDS
ATATCCAAAACCTTATAAGT+AGG 0.547753 8_1:+71763335 None:intergenic
GTCTCATGAGTATATTGGTA+TGG 0.549402 8_1:-71764691 Msa1211930:CDS
GGGAGTTTATGGCCGTTGGA+TGG 0.554741 8_1:+71765204 None:intergenic
GAATTGGGTGGTTTCTGGTG+AGG 0.558563 8_1:+71765043 None:intergenic
TTACAGGTCCAATCCTGCTA+GGG 0.562987 8_1:-71763297 Msa1211930:CDS
AGGGTTCGGCGAATGGGAAG+AGG 0.563143 8_1:-71763415 Msa1211930:CDS
AAGTTGGCTATCAACACCAT+TGG 0.564334 8_1:-71763173 Msa1211930:CDS
CTGGTGATTGGAGCATAGCA+GGG 0.564836 8_1:-71762947 Msa1211930:three_prime_UTR
TTTGAGGGCAATGGAGCTCA+TGG 0.565078 8_1:+71765088 None:intergenic
GGATCTTGCGGAGATGTATG+TGG 0.566935 8_1:-71763756 Msa1211930:CDS
AGGAGCCATTCCTCTCTGCA+TGG 0.568282 8_1:-71764817 Msa1211930:CDS
GACGGTGAATTTGCGGCGGT+GGG 0.569026 8_1:+71764998 None:intergenic
GAGGAAGGATTTGAGGGCAA+TGG 0.569467 8_1:+71765079 None:intergenic
GTGAGGGAGTGAGGAATGAG+GGG 0.573874 8_1:+71765124 None:intergenic
TCCATTGGAGGATATCAAGT+TGG 0.576911 8_1:-71763189 Msa1211930:CDS
CACCGGAACTGTGACACACA+AGG 0.577442 8_1:-71763669 Msa1211930:CDS
GTTGCTAAGTCTATTGATGC+TGG 0.578907 8_1:-71764450 Msa1211930:CDS
ATGTCGCCGTCGACATTGGT+AGG 0.579219 8_1:-71764722 Msa1211930:CDS
TGGTTTCTGGTGAGGAAATG+CGG 0.579219 8_1:+71765051 None:intergenic
ATGTCGACGGCGACATTCGA+CGG 0.582173 8_1:+71764729 None:intergenic
ATCGGCGGTGGTCCAGCAGG+TGG 0.582561 8_1:-71764921 Msa1211930:CDS
ACCCTATACCAGAACATCCA+AGG 0.583597 8_1:-71763562 Msa1211930:CDS
ATTGCCCTCAAATCCTTCCT+CGG 0.585608 8_1:-71765077 Msa1211930:CDS
GCCACGAAGATTGTCAGGGA+GGG 0.591898 8_1:-71763540 Msa1211930:CDS
TGGCCGTTGGATGGATGCGA+TGG 0.593987 8_1:+71765213 None:intergenic
GGTGGGAGATGGGTTTGGGG+CGG 0.594547 8_1:+71765015 None:intergenic
TTATCTTAGAAATAGGGCTA+AGG 0.596386 8_1:-71764646 Msa1211930:CDS
TCTATTTCGCAGCCAAGAGT+GGG 0.596561 8_1:-71763463 Msa1211930:CDS
GTGACCAAATGTTCTGGAGA+AGG 0.597062 8_1:-71763488 Msa1211930:CDS
CGGCGGTCAATGATGTCTAG+TGG 0.598418 8_1:+71764777 None:intergenic
GGAAATGCGGAGGCCGAGGA+AGG 0.607962 8_1:+71765064 None:intergenic
TTATGATGGGAAAACTGGTG+GGG 0.607967 8_1:-71764535 Msa1211930:CDS
TGGAGAGTTGAGATTTCATG+TGG 0.610255 8_1:+71765233 None:intergenic
GATTCTTAATGATCTTACAA+AGG 0.611585 8_1:-71762742 Msa1211930:three_prime_UTR
TGTACAAGACTGTTGTGCCT+GGG 0.612477 8_1:-71763214 Msa1211930:CDS
TCTCCATCGCATCCATCCAA+CGG 0.613499 8_1:-71765216 Msa1211930:five_prime_UTR
ATGGTGATTGAGGGAAAGTG+AGG 0.615134 8_1:+71765107 None:intergenic
TTAGGGCTAATGCTCTAAGG+AGG 0.617977 8_1:-71763142 Msa1211930:CDS
TGCGCAGAGGCAATTGTGCA+GGG 0.620081 8_1:-71763434 Msa1211930:CDS
GGTCAATGATGTCTAGTGGA+AGG 0.620194 8_1:+71764781 None:intergenic
GCCAACTTGATATCCTCCAA+TGG 0.620794 8_1:+71763188 None:intergenic
CACCGCCGATGACAGCGACA+CGG 0.621764 8_1:+71764934 None:intergenic
ACCAACCATGCAGAGAGGAA+TGG 0.622279 8_1:+71764812 None:intergenic
AGAGGAATGGCTCCTCCACA+TGG 0.622376 8_1:+71764825 None:intergenic
TTCGGCGAATGGGAAGAGGA+TGG 0.627116 8_1:-71763411 Msa1211930:CDS
TTCCGGTGCCGACAGCAACA+TGG 0.628007 8_1:+71763684 None:intergenic
TAATGCTCTAAGGAGGGAGA+TGG 0.631923 8_1:-71763135 Msa1211930:CDS
AGCCCTAACCAAGCTCCCAA+TGG 0.636991 8_1:+71763157 None:intergenic
GCAGAAACACTAGCAAAAGG+TGG 0.639267 8_1:-71764891 Msa1211930:CDS
TAGGGCTAATGCTCTAAGGA+GGG 0.641569 8_1:-71763141 Msa1211930:CDS
ATTTCGCAGCCAAGAGTGGG+AGG 0.644515 8_1:-71763460 Msa1211930:CDS
TCATCTTCATCTTGGTAACA+CGG 0.646038 8_1:+71764757 None:intergenic
GCTGGTTGCTGCAGCAACGA+CGG 0.647516 8_1:+71764980 None:intergenic
TGGTGATTGAGGGAAAGTGA+GGG 0.648485 8_1:+71765108 None:intergenic
AGAAATTCCAACTAGCAACA+AGG 0.653031 8_1:-71763637 Msa1211930:CDS
GGGCAAGATTATCCGTGTGG+AGG 0.655629 8_1:-71763588 Msa1211930:CDS
GCCGAGGACAAGATCTTAGG+GGG 0.656426 8_1:-71763608 Msa1211930:CDS
ATGAGTATATTGGTATGGTG+AGG 0.657171 8_1:-71764686 Msa1211930:CDS
ACCGGAACTGTGACACACAA+GGG 0.664074 8_1:-71763668 Msa1211930:CDS
GACAACTGCAAACCATGTGG+AGG 0.664445 8_1:-71764837 Msa1211930:CDS
GGCCACGAAGATTGTCAGGG+AGG 0.664448 8_1:-71763541 Msa1211930:CDS
AGCAACAAGGAAAAGAGCCG+AGG 0.665901 8_1:-71763624 Msa1211930:CDS
CAAGGCCACGAAGATTGTCA+GGG 0.673953 8_1:-71763544 Msa1211930:CDS
AAGTGTCCTACCAATGTCGA+CGG 0.676648 8_1:+71764716 None:intergenic
GATCTTGCGGAGATGTATGT+GGG 0.677527 8_1:-71763755 Msa1211930:CDS
GTATAGGGTGAGCCTCCACA+CGG 0.681936 8_1:+71763576 None:intergenic
GAGTGGGAGGATGTGCGCAG+AGG 0.683072 8_1:-71763447 Msa1211930:CDS
CAACGACGGTGAATTTGCGG+CGG 0.685263 8_1:+71764994 None:intergenic
AAATGTGACCATGTTGCTGT+CGG 0.686456 8_1:-71763692 Msa1211930:CDS
ATGGACAACTGCAAACCATG+TGG 0.691065 8_1:-71764840 Msa1211930:CDS
TATTGGTATGGTGAGGCGTG+AGG 0.696798 8_1:-71764679 Msa1211930:CDS
AACTCACCAACCATGCAGAG+AGG 0.710486 8_1:+71764807 None:intergenic
AGCCGAGGACAAGATCTTAG+GGG 0.711384 8_1:-71763609 Msa1211930:CDS
GGGGCGGTAGGAGAATTGGG+TGG 0.719493 8_1:+71765031 None:intergenic
CGCCGATGACAGCGACACGG+AGG 0.724003 8_1:+71764937 None:intergenic
TGACAAAATGACTTATTACG+AGG 0.726774 8_1:-71763777 Msa1211930:CDS
TTTCTGGTGAGGAAATGCGG+AGG 0.741612 8_1:+71765054 None:intergenic
TCTTCATCTTGGTAACACGG+CGG 0.792919 8_1:+71764760 None:intergenic
ACAGTGATGAATGACTATTG+TGG 0.842544 8_1:+71763095 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGATAAATTAATATGTATAC+AGG + chr8_1:71764819-71764838 None:intergenic 15.0%
!! GATATATATAACTAACATAA+GGG + chr8_1:71765063-71765082 None:intergenic 15.0%
!! AGATATATATAACTAACATA+AGG + chr8_1:71765064-71765083 None:intergenic 15.0%
!! TTAAATATACCAATGATAAT+TGG - chr8_1:71765102-71765121 Msa1211930:exon 15.0%
!!! TTGATGATTATCTTAGAAAT+AGG - chr8_1:71763227-71763246 Msa1211930:CDS 20.0%
!! TGATGATTATCTTAGAAATA+GGG - chr8_1:71763228-71763247 Msa1211930:CDS 20.0%
!! TTCATTATTCTTCTTATGAT+GGG - chr8_1:71763332-71763351 Msa1211930:CDS 20.0%
!! AATTGTAAGATGTAACAATT+TGG - chr8_1:71763620-71763639 Msa1211930:CDS 20.0%
!!! ACAATTTGGTCTTAAAATTA+AGG - chr8_1:71763634-71763653 Msa1211930:CDS 20.0%
!!! CAATTTGGTCTTAAAATTAA+GGG - chr8_1:71763635-71763654 Msa1211930:CDS 20.0%
!!! TCACATTAGTGTTATTATTT+TGG - chr8_1:71763678-71763697 Msa1211930:CDS 20.0%
!!! TCAAGTATTGTTCAATTTAA+GGG + chr8_1:71763843-71763862 None:intergenic 20.0%
!!! ATCAAGTATTGTTCAATTTA+AGG + chr8_1:71763844-71763863 None:intergenic 20.0%
!! TAATTATCTGTATAAGCAAA+CGG - chr8_1:71764881-71764900 Msa1211930:CDS 20.0%
!!! GAATTTATGAGATTTGATTT+AGG - chr8_1:71765029-71765048 Msa1211930:CDS 20.0%
!! ATTTCATGTGGATAGATTTT+GGG + chr8_1:71762638-71762657 None:intergenic 25.0%
! GAAGAATAATGAAGAACATA+AGG + chr8_1:71763325-71763344 None:intergenic 25.0%
! CTTCATTATTCTTCTTATGA+TGG - chr8_1:71763331-71763350 Msa1211930:CDS 25.0%
!! TTCTGTGAATTAGCAATTTT+TGG - chr8_1:71763522-71763541 Msa1211930:CDS 25.0%
! ATATGAAACCTTCCTAAATA+CGG + chr8_1:71763741-71763760 None:intergenic 25.0%
!!! CAAATTAGTCTTGAAATAGT+AGG + chr8_1:71763938-71763957 None:intergenic 25.0%
! CTACTATTTCAAGACTAATT+TGG - chr8_1:71763936-71763955 Msa1211930:intron 25.0%
!!! ATGTGGTTTCTATTTTTGAA+AGG - chr8_1:71764008-71764027 Msa1211930:intron 25.0%
!! ATTAGCATGTTTCATTTTGA+TGG - chr8_1:71764042-71764061 Msa1211930:intron 25.0%
!!! TAATAAGTCATTTTGTCATC+CGG + chr8_1:71764101-71764120 None:intergenic 25.0%
! ATATCCAAAACCTTATAAGT+AGG + chr8_1:71764548-71764567 None:intergenic 25.0%
! AATTAATATGTATACAGGTC+AGG + chr8_1:71764814-71764833 None:intergenic 25.0%
! AATTATCTGTATAAGCAAAC+GGG - chr8_1:71764882-71764901 Msa1211930:CDS 25.0%
! GATTCTTAATGATCTTACAA+AGG - chr8_1:71765138-71765157 Msa1211930:five_prime_UTR 25.0%
!! CAATGTAAGAATTTTATCAG+TGG - chr8_1:71765182-71765201 Msa1211930:five_prime_UTR 25.0%
! GATTTCATGTGGATAGATTT+TGG + chr8_1:71762639-71762658 None:intergenic 30.0%
!!! TTTTATTGGAATGGTGGATA+TGG + chr8_1:71762714-71762733 None:intergenic 30.0%
!! TTTGTGGTGATGTGTTTTAT+TGG + chr8_1:71762728-71762747 None:intergenic 30.0%
CTTAAGTCTCATGAGTATAT+TGG - chr8_1:71763184-71763203 Msa1211930:CDS 30.0%
TTATCTTAGAAATAGGGCTA+AGG - chr8_1:71763234-71763253 Msa1211930:CDS 30.0%
AATGGAGCGAATATTATCAA+TGG - chr8_1:71763259-71763278 Msa1211930:CDS 30.0%
ATGGAGCGAATATTATCAAT+GGG - chr8_1:71763260-71763279 Msa1211930:CDS 30.0%
!!! CAATGGGTTGTTTTTGAAAA+TGG - chr8_1:71763276-71763295 Msa1211930:CDS 30.0%
TGAATATGCTATTGCATTTC+AGG - chr8_1:71763459-71763478 Msa1211930:CDS 30.0%
AGGGTAAATACTCTATAACA+TGG - chr8_1:71763654-71763673 Msa1211930:CDS 30.0%
! TGAGTTTGAAATCCGTATTT+AGG - chr8_1:71763726-71763745 Msa1211930:CDS 30.0%
! TTTGAAATCCGTATTTAGGA+AGG - chr8_1:71763730-71763749 Msa1211930:CDS 30.0%
AATGAGACCAATGACAAAAT+TGG + chr8_1:71763888-71763907 None:intergenic 30.0%
TTGGTCTCATTTACTCATTT+AGG - chr8_1:71763897-71763916 Msa1211930:intron 30.0%
TGGTCTCATTTACTCATTTA+GGG - chr8_1:71763898-71763917 Msa1211930:intron 30.0%
AATAGTAGGATTAGACAACT+TGG + chr8_1:71763924-71763943 None:intergenic 30.0%
! TAGTTCATTGTGGTGTTTTA+TGG - chr8_1:71763980-71763999 Msa1211930:intron 30.0%
! GGTGTTTTATGGTTTATATG+TGG - chr8_1:71763991-71764010 Msa1211930:intron 30.0%
!! CATGTTTCATTTTGATGGTA+TGG - chr8_1:71764047-71764066 Msa1211930:intron 30.0%
ATGGTATGGTTAAATTTCTC+AGG - chr8_1:71764061-71764080 Msa1211930:intron 30.0%
!! AATAAGTCATTTTGTCATCC+GGG + chr8_1:71764100-71764119 None:intergenic 30.0%
TGACAAAATGACTTATTACG+AGG - chr8_1:71764103-71764122 Msa1211930:intron 30.0%
TGAGGAAATATTTGGAGAAA+TGG - chr8_1:71764507-71764526 Msa1211930:CDS 30.0%
GAGGAAATATTTGGAGAAAT+GGG - chr8_1:71764508-71764527 Msa1211930:CDS 30.0%
TCAACTAGACCAATTATCAT+TGG + chr8_1:71765114-71765133 None:intergenic 30.0%
! GATAATTGGTCTAGTTGATA+AGG - chr8_1:71765116-71765135 Msa1211930:five_prime_UTR 30.0%
! TTGTGATTTGTGGGAGTTTA+TGG + chr8_1:71762690-71762709 None:intergenic 35.0%
! GGATATGGTTTGTGATTTGT+GGG + chr8_1:71762699-71762718 None:intergenic 35.0%
! TGGATATGGTTTGTGATTTG+TGG + chr8_1:71762700-71762719 None:intergenic 35.0%
!! GATGTGTTTTATTGGAATGG+TGG + chr8_1:71762720-71762739 None:intergenic 35.0%
!! GGTGATGTGTTTTATTGGAA+TGG + chr8_1:71762723-71762742 None:intergenic 35.0%
!! ATGAGGGGTTTGAAATTTTG+TGG + chr8_1:71762744-71762763 None:intergenic 35.0%
! TCATCTTCATCTTGGTAACA+CGG + chr8_1:71763126-71763145 None:intergenic 35.0%
GTCTCATGAGTATATTGGTA+TGG - chr8_1:71763189-71763208 Msa1211930:CDS 35.0%
ATGAGTATATTGGTATGGTG+AGG - chr8_1:71763194-71763213 Msa1211930:CDS 35.0%
AGAAATAGGGCTAAGGAAAA+TGG - chr8_1:71763241-71763260 Msa1211930:CDS 35.0%
!! TAAGGCGCATTCTTTTGTTT+AGG + chr8_1:71763307-71763326 None:intergenic 35.0%
! TCTTCTTATGATGGGAAAAC+TGG - chr8_1:71763340-71763359 Msa1211930:CDS 35.0%
!! GGTTGGTGAAAAAACTACTT+TGG - chr8_1:71763366-71763385 Msa1211930:CDS 35.0%
!! TTGGAAGTTGATGCTGTTAT+TGG - chr8_1:71763385-71763404 Msa1211930:CDS 35.0%
ATGTCAACCGAGTCTTTAAT+CGG - chr8_1:71763551-71763570 Msa1211930:CDS 35.0%
!! TTTATAGTCTTGTCTTGTGC+AGG - chr8_1:71763782-71763801 Msa1211930:CDS 35.0%
!! TTATAGTCTTGTCTTGTGCA+GGG - chr8_1:71763783-71763802 Msa1211930:CDS 35.0%
ACAAAATTGGCATGCACAAA+AGG + chr8_1:71763875-71763894 None:intergenic 35.0%
GACTTAGATGTAGTTCATTG+TGG - chr8_1:71763970-71763989 Msa1211930:intron 35.0%
ATGGTTAAATTTCTCAGGAG+AGG - chr8_1:71764066-71764085 Msa1211930:intron 35.0%
AGAAATTCCAACTAGCAACA+AGG - chr8_1:71764243-71764262 Msa1211930:intron 35.0%
AGGGGATTTGAGGAAATATT+TGG - chr8_1:71764499-71764518 Msa1211930:CDS 35.0%
AGAAATGGGACAAGACATAT+TGG - chr8_1:71764522-71764541 Msa1211930:CDS 35.0%
! GACATATTGGCCTACTTATA+AGG - chr8_1:71764535-71764554 Msa1211930:CDS 35.0%
! TTGGCCTACTTATAAGGTTT+TGG - chr8_1:71764541-71764560 Msa1211930:CDS 35.0%
!!! GGTTTTGGATATTCTTCAGA+AGG - chr8_1:71764556-71764575 Msa1211930:CDS 35.0%
!!! TTCTTCAGAAGGTGTTTTAC+AGG - chr8_1:71764567-71764586 Msa1211930:CDS 35.0%
ACAGTGATGAATGACTATTG+TGG + chr8_1:71764788-71764807 None:intergenic 35.0%
TCCAATCACCAGTCTATATT+GGG + chr8_1:71764925-71764944 None:intergenic 35.0%
TGCATGTAGTATTTATCAGC+TGG - chr8_1:71765007-71765026 Msa1211930:CDS 35.0%
TGGAGAGTTGAGATTTCATG+TGG + chr8_1:71762650-71762669 None:intergenic 40.0%
! CATTTTACGTTCGATGAGGA+AGG + chr8_1:71763023-71763042 None:intergenic 40.0%
CTTCCTCATCGAACGTAAAA+TGG - chr8_1:71763021-71763040 Msa1211930:three_prime_UTR 40.0%
! TGTCCATTTTACGTTCGATG+AGG + chr8_1:71763027-71763046 None:intergenic 40.0%
CGGAGAAATCATCTTCATCT+TGG + chr8_1:71763134-71763153 None:intergenic 40.0%
! TCTTATGATGGGAAAACTGG+TGG - chr8_1:71763343-71763362 Msa1211930:CDS 40.0%
! CTTATGATGGGAAAACTGGT+GGG - chr8_1:71763344-71763363 Msa1211930:CDS 40.0%
! TTATGATGGGAAAACTGGTG+GGG - chr8_1:71763345-71763364 Msa1211930:CDS 40.0%
GTTGCTAAGTCTATTGATGC+TGG - chr8_1:71763430-71763449 Msa1211930:CDS 40.0%
TGTCAACCGAGTCTTTAATC+GGG - chr8_1:71763552-71763571 Msa1211930:CDS 40.0%
CTAGAACCCGATTAAAGACT+CGG + chr8_1:71763561-71763580 None:intergenic 40.0%
! GTGCATGCCAATTTTGTCAT+TGG - chr8_1:71763878-71763897 Msa1211930:intron 40.0%
TCAGGAGAGGATAAAAATCC+CGG - chr8_1:71764079-71764098 Msa1211930:intron 40.0%
GACTTATTACGAGGATCTTG+CGG - chr8_1:71764112-71764131 Msa1211930:intron 40.0%
TTTCTCCTGACTTCTATGGT+TGG - chr8_1:71764156-71764175 Msa1211930:intron 40.0%
TTCTCCTGACTTCTATGGTT+GGG - chr8_1:71764157-71764176 Msa1211930:intron 40.0%
! CAGCAACATGGTCACATTTT+GGG + chr8_1:71764187-71764206 None:intergenic 40.0%
! ACAGCAACATGGTCACATTT+TGG + chr8_1:71764188-71764207 None:intergenic 40.0%
AAATGTGACCATGTTGCTGT+CGG - chr8_1:71764188-71764207 Msa1211930:intron 40.0%
! CTCTTTTCCTTGTTGCTAGT+TGG + chr8_1:71764253-71764272 None:intergenic 40.0%
GATTCCTTCTCCAGAACATT+TGG + chr8_1:71764399-71764418 None:intergenic 40.0%
TCCATTGGAGGATATCAAGT+TGG - chr8_1:71764691-71764710 Msa1211930:CDS 40.0%
AAGTTGGCTATCAACACCAT+TGG - chr8_1:71764707-71764726 Msa1211930:CDS 40.0%
AGTTGGCTATCAACACCATT+GGG - chr8_1:71764708-71764727 Msa1211930:CDS 40.0%
CATGCAATCCCAATATAGAC+TGG - chr8_1:71764914-71764933 Msa1211930:CDS 40.0%
TCCCAATATAGACTGGTGAT+TGG - chr8_1:71764921-71764940 Msa1211930:CDS 40.0%
CTCCAATCACCAGTCTATAT+TGG + chr8_1:71764926-71764945 None:intergenic 40.0%
TGGTGATTGAGGGAAAGTGA+GGG + chr8_1:71762775-71762794 None:intergenic 45.0%
ATGGTGATTGAGGGAAAGTG+AGG + chr8_1:71762776-71762795 None:intergenic 45.0%
ATGGAGCTCATGGTGATTGA+GGG + chr8_1:71762785-71762804 None:intergenic 45.0%
AATGGAGCTCATGGTGATTG+AGG + chr8_1:71762786-71762805 None:intergenic 45.0%
ATTGCCCTCAAATCCTTCCT+CGG - chr8_1:71762803-71762822 Msa1211930:three_prime_UTR 45.0%
!! TGGTTTCTGGTGAGGAAATG+CGG + chr8_1:71762832-71762851 None:intergenic 45.0%
TAGGAGAATTGGGTGGTTTC+TGG + chr8_1:71762845-71762864 None:intergenic 45.0%
!!! GGTTACGGCCATCGATTTTT+GGG + chr8_1:71762925-71762944 None:intergenic 45.0%
!!! AGGTTACGGCCATCGATTTT+TGG + chr8_1:71762926-71762945 None:intergenic 45.0%
GCAGCAGAAACACTAGCAAA+AGG - chr8_1:71762986-71763005 Msa1211930:three_prime_UTR 45.0%
GCAGAAACACTAGCAAAAGG+TGG - chr8_1:71762989-71763008 Msa1211930:three_prime_UTR 45.0%
ATGGACAACTGCAAACCATG+TGG - chr8_1:71763040-71763059 Msa1211930:three_prime_UTR 45.0%
GGTCAATGATGTCTAGTGGA+AGG + chr8_1:71763102-71763121 None:intergenic 45.0%
! TCTTCATCTTGGTAACACGG+CGG + chr8_1:71763123-71763142 None:intergenic 45.0%
AAGTGTCCTACCAATGTCGA+CGG + chr8_1:71763167-71763186 None:intergenic 45.0%
!! GATGCTGTTATTGGTGCTGA+TGG - chr8_1:71763394-71763413 Msa1211930:CDS 45.0%
CGAGTCTTTAATCGGGTTCT+AGG - chr8_1:71763559-71763578 Msa1211930:CDS 45.0%
GATCTTGCGGAGATGTATGT+GGG - chr8_1:71764125-71764144 Msa1211930:intron 45.0%
GACGTTTCTCCTGACTTCTA+TGG - chr8_1:71764152-71764171 Msa1211930:intron 45.0%
AACACCCAACCATAGAAGTC+AGG + chr8_1:71764164-71764183 None:intergenic 45.0%
ACCCTATACCAGAACATCCA+AGG - chr8_1:71764318-71764337 Msa1211930:intron 45.0%
GCCTTGGATGTTCTGGTATA+GGG + chr8_1:71764322-71764341 None:intergenic 45.0%
!! GTGACCAAATGTTCTGGAGA+AGG - chr8_1:71764392-71764411 Msa1211930:intron 45.0%
ATCTATTTCGCAGCCAAGAG+TGG - chr8_1:71764416-71764435 Msa1211930:intron 45.0%
TCTATTTCGCAGCCAAGAGT+GGG - chr8_1:71764417-71764436 Msa1211930:intron 45.0%
GGAAGAGGATGGTTGAAGAA+GGG - chr8_1:71764480-71764499 Msa1211930:CDS 45.0%
GAAGAGGATGGTTGAAGAAG+GGG - chr8_1:71764481-71764500 Msa1211930:CDS 45.0%
TGGTTGAAGAAGGGGATTTG+AGG - chr8_1:71764489-71764508 Msa1211930:CDS 45.0%
TTTACAGGTCCAATCCTGCT+AGG - chr8_1:71764582-71764601 Msa1211930:CDS 45.0%
TTACAGGTCCAATCCTGCTA+GGG - chr8_1:71764583-71764602 Msa1211930:CDS 45.0%
AAAAGCTTCCCTAGCAGGAT+TGG + chr8_1:71764594-71764613 None:intergenic 45.0%
TCAACAAAAGCTTCCCTAGC+AGG + chr8_1:71764599-71764618 None:intergenic 45.0%
TGTACAAGACTGTTGTGCCT+GGG - chr8_1:71764666-71764685 Msa1211930:CDS 45.0%
GCCAACTTGATATCCTCCAA+TGG + chr8_1:71764695-71764714 None:intergenic 45.0%
TATCAACACCATTGGGAGCT+TGG - chr8_1:71764715-71764734 Msa1211930:CDS 45.0%
TGGTTAGGGCTAATGCTCTA+AGG - chr8_1:71764735-71764754 Msa1211930:CDS 45.0%
!! TTAGGGCTAATGCTCTAAGG+AGG - chr8_1:71764738-71764757 Msa1211930:CDS 45.0%
!! TAGGGCTAATGCTCTAAGGA+GGG - chr8_1:71764739-71764758 Msa1211930:CDS 45.0%
!! TAATGCTCTAAGGAGGGAGA+TGG - chr8_1:71764745-71764764 Msa1211930:CDS 45.0%
!!! TTACAATTTTAAAATTAAAT+TGG + chr8_1:71763608-71763627 None:intergenic 5.0%
TCTCCATCGCATCCATCCAA+CGG - chr8_1:71762664-71762683 Msa1211930:three_prime_UTR 50.0%
TTGTGGGAGTTTATGGCCGT+TGG + chr8_1:71762683-71762702 None:intergenic 50.0%
AGTGAGGGAGTGAGGAATGA+GGG + chr8_1:71762760-71762779 None:intergenic 50.0%
AAGTGAGGGAGTGAGGAATG+AGG + chr8_1:71762761-71762780 None:intergenic 50.0%
TTTGAGGGCAATGGAGCTCA+TGG + chr8_1:71762795-71762814 None:intergenic 50.0%
GAGGAAGGATTTGAGGGCAA+TGG + chr8_1:71762804-71762823 None:intergenic 50.0%
! TTTCTGGTGAGGAAATGCGG+AGG + chr8_1:71762829-71762848 None:intergenic 50.0%
!! GAATTGGGTGGTTTCTGGTG+AGG + chr8_1:71762840-71762859 None:intergenic 50.0%
! TTTGGGGCGGTAGGAGAATT+GGG + chr8_1:71762855-71762874 None:intergenic 50.0%
CAGCAACGACGGTGAATTTG+CGG + chr8_1:71762892-71762911 None:intergenic 50.0%
GCAACCAGCCCAAAAATCGA+TGG - chr8_1:71762914-71762933 Msa1211930:three_prime_UTR 50.0%
GACAACTGCAAACCATGTGG+AGG - chr8_1:71763043-71763062 Msa1211930:three_prime_UTR 50.0%
ACCAACCATGCAGAGAGGAA+TGG + chr8_1:71763071-71763090 None:intergenic 50.0%
AACTCACCAACCATGCAGAG+AGG + chr8_1:71763076-71763095 None:intergenic 50.0%
TATTGGTATGGTGAGGCGTG+AGG - chr8_1:71763201-71763220 Msa1211930:CDS 50.0%
GGATCTTGCGGAGATGTATG+TGG - chr8_1:71764124-71764143 Msa1211930:intron 50.0%
ACCGGAACTGTGACACACAA+GGG - chr8_1:71764212-71764231 Msa1211930:intron 50.0%
TCCCTTGTGTGTCACAGTTC+CGG + chr8_1:71764216-71764235 None:intergenic 50.0%
AGCAACAAGGAAAAGAGCCG+AGG - chr8_1:71764256-71764275 Msa1211930:intron 50.0%
AGAGCCGAGGACAAGATCTT+AGG - chr8_1:71764269-71764288 Msa1211930:intron 50.0%
GAGCCGAGGACAAGATCTTA+GGG - chr8_1:71764270-71764289 Msa1211930:intron 50.0%
AGCCGAGGACAAGATCTTAG+GGG - chr8_1:71764271-71764290 Msa1211930:intron 50.0%
GGCCTTGGATGTTCTGGTAT+AGG + chr8_1:71764323-71764342 None:intergenic 50.0%
CAAGGCCACGAAGATTGTCA+GGG - chr8_1:71764336-71764355 Msa1211930:intron 50.0%
GGCTACGTGACCAAATGTTC+TGG - chr8_1:71764386-71764405 Msa1211930:intron 50.0%
AGAGGCAATTGTGCAGGGTT+CGG - chr8_1:71764451-71764470 Msa1211930:CDS 50.0%
GGGAAGAGGATGGTTGAAGA+AGG - chr8_1:71764479-71764498 Msa1211930:CDS 50.0%
CTGTACAAGACTGTTGTGCC+TGG - chr8_1:71764665-71764684 Msa1211930:CDS 50.0%
! ATATCCTCCAATGGACTCCC+AGG + chr8_1:71764686-71764705 None:intergenic 50.0%
ACACCATTGGGAGCTTGGTT+AGG - chr8_1:71764720-71764739 Msa1211930:CDS 50.0%
CACCATTGGGAGCTTGGTTA+GGG - chr8_1:71764721-71764740 Msa1211930:CDS 50.0%
ACTGGTGATTGGAGCATAGC+AGG - chr8_1:71764932-71764951 Msa1211930:CDS 50.0%
CTGGTGATTGGAGCATAGCA+GGG - chr8_1:71764933-71764952 Msa1211930:CDS 50.0%
GGGAGTTTATGGCCGTTGGA+TGG + chr8_1:71762679-71762698 None:intergenic 55.0%
GTGAGGGAGTGAGGAATGAG+GGG + chr8_1:71762759-71762778 None:intergenic 55.0%
TGAGGGAAAGTGAGGGAGTG+AGG + chr8_1:71762768-71762787 None:intergenic 55.0%
GAGGCCGAGGAAGGATTTGA+GGG + chr8_1:71762810-71762829 None:intergenic 55.0%
! GTTTGGGGCGGTAGGAGAAT+TGG + chr8_1:71762856-71762875 None:intergenic 55.0%
AATTTGCGGCGGTGGGAGAT+GGG + chr8_1:71762878-71762897 None:intergenic 55.0%
CAACGACGGTGAATTTGCGG+CGG + chr8_1:71762889-71762908 None:intergenic 55.0%
!!! ACGGCCATCGATTTTTGGGC+TGG + chr8_1:71762921-71762940 None:intergenic 55.0%
TGACAGCGACACGGAGGTTA+CGG + chr8_1:71762940-71762959 None:intergenic 55.0%
! AACCTCCGTGTCGCTGTCAT+CGG - chr8_1:71762941-71762960 Msa1211930:three_prime_UTR 55.0%
AGAGGAATGGCTCCTCCACA+TGG + chr8_1:71763058-71763077 None:intergenic 55.0%
AGGAGCCATTCCTCTCTGCA+TGG - chr8_1:71763063-71763082 Msa1211930:three_prime_UTR 55.0%
GCCATTCCTCTCTGCATGGT+TGG - chr8_1:71763067-71763086 Msa1211930:three_prime_UTR 55.0%
CGGCGGTCAATGATGTCTAG+TGG + chr8_1:71763106-71763125 None:intergenic 55.0%
ATGTCGACGGCGACATTCGA+CGG + chr8_1:71763154-71763173 None:intergenic 55.0%
TCGAATGTCGCCGTCGACAT+TGG - chr8_1:71763154-71763173 Msa1211930:CDS 55.0%
ATGTCGCCGTCGACATTGGT+AGG - chr8_1:71763158-71763177 Msa1211930:CDS 55.0%
GATGGGAAAACTGGTGGGGT+TGG - chr8_1:71763349-71763368 Msa1211930:CDS 55.0%
CACCGGAACTGTGACACACA+AGG - chr8_1:71764211-71764230 Msa1211930:intron 55.0%
GCCGAGGACAAGATCTTAGG+GGG - chr8_1:71764272-71764291 Msa1211930:intron 55.0%
GCCCCCTAAGATCTTGTCCT+CGG + chr8_1:71764276-71764295 None:intergenic 55.0%
AGGGGGCAAGATTATCCGTG+TGG - chr8_1:71764289-71764308 Msa1211930:intron 55.0%
GGGCAAGATTATCCGTGTGG+AGG - chr8_1:71764292-71764311 Msa1211930:intron 55.0%
GTATAGGGTGAGCCTCCACA+CGG + chr8_1:71764307-71764326 None:intergenic 55.0%
! CTTCGTGGCCTTGGATGTTC+TGG + chr8_1:71764329-71764348 None:intergenic 55.0%
CCTGACAATCTTCGTGGCCT+TGG + chr8_1:71764338-71764357 None:intergenic 55.0%
CCAAGGCCACGAAGATTGTC+AGG - chr8_1:71764335-71764354 Msa1211930:intron 55.0%
GCCACGAAGATTGTCAGGGA+GGG - chr8_1:71764340-71764359 Msa1211930:intron 55.0%
ACCCTCCCTGACAATCTTCG+TGG + chr8_1:71764344-71764363 None:intergenic 55.0%
ATTTCGCAGCCAAGAGTGGG+AGG - chr8_1:71764420-71764439 Msa1211930:intron 55.0%
TGCGCAGAGGCAATTGTGCA+GGG - chr8_1:71764446-71764465 Msa1211930:CDS 55.0%
ATTGTGCAGGGTTCGGCGAA+TGG - chr8_1:71764458-71764477 Msa1211930:CDS 55.0%
TTGTGCAGGGTTCGGCGAAT+GGG - chr8_1:71764459-71764478 Msa1211930:CDS 55.0%
TTCGGCGAATGGGAAGAGGA+TGG - chr8_1:71764469-71764488 Msa1211930:CDS 55.0%
TGTTGTGCCTGGGAGTCCAT+TGG - chr8_1:71764676-71764695 Msa1211930:CDS 55.0%
AGCCCTAACCAAGCTCCCAA+TGG + chr8_1:71764726-71764745 None:intergenic 55.0%
TGGCCGTTGGATGGATGCGA+TGG + chr8_1:71762670-71762689 None:intergenic 60.0%
GGAGGCCGAGGAAGGATTTG+AGG + chr8_1:71762811-71762830 None:intergenic 60.0%
GAATTTGCGGCGGTGGGAGA+TGG + chr8_1:71762879-71762898 None:intergenic 60.0%
GACGGTGAATTTGCGGCGGT+GGG + chr8_1:71762885-71762904 None:intergenic 60.0%
GCTGGTTGCTGCAGCAACGA+CGG + chr8_1:71762903-71762922 None:intergenic 60.0%
GACCATGTTGCTGTCGGCAC+CGG - chr8_1:71764194-71764213 Msa1211930:intron 60.0%
!! TTCCGGTGCCGACAGCAACA+TGG + chr8_1:71764199-71764218 None:intergenic 60.0%
GGCCACGAAGATTGTCAGGG+AGG - chr8_1:71764339-71764358 Msa1211930:intron 60.0%
TGCGCACATCCTCCCACTCT+TGG + chr8_1:71764432-71764451 None:intergenic 60.0%
GTGCGCAGAGGCAATTGTGC+AGG - chr8_1:71764445-71764464 Msa1211930:CDS 60.0%
AGGGTTCGGCGAATGGGAAG+AGG - chr8_1:71764465-71764484 Msa1211930:CDS 60.0%
TGTGCCTGGGAGTCCATTGG+AGG - chr8_1:71764679-71764698 Msa1211930:CDS 60.0%
GGAAATGCGGAGGCCGAGGA+AGG + chr8_1:71762819-71762838 None:intergenic 65.0%
GTGAGGAAATGCGGAGGCCG+AGG + chr8_1:71762823-71762842 None:intergenic 65.0%
GGGGCGGTAGGAGAATTGGG+TGG + chr8_1:71762852-71762871 None:intergenic 65.0%
! GGAGATGGGTTTGGGGCGGT+AGG + chr8_1:71762864-71762883 None:intergenic 65.0%
! GGTGGGAGATGGGTTTGGGG+CGG + chr8_1:71762868-71762887 None:intergenic 65.0%
! GGCGGTGGGAGATGGGTTTG+GGG + chr8_1:71762871-71762890 None:intergenic 65.0%
! CGGCGGTGGGAGATGGGTTT+GGG + chr8_1:71762872-71762891 None:intergenic 65.0%
CGACGGTGAATTTGCGGCGG+TGG + chr8_1:71762886-71762905 None:intergenic 65.0%
! CTCCGTGTCGCTGTCATCGG+CGG - chr8_1:71762944-71762963 Msa1211930:three_prime_UTR 65.0%
CACCGCCGATGACAGCGACA+CGG + chr8_1:71762949-71762968 None:intergenic 65.0%
TCTGCTGCTGCACCACCTGC+TGG + chr8_1:71762974-71762993 None:intergenic 65.0%
TCAGGGAGGGTCGCGCTTGT+GGG - chr8_1:71764353-71764372 Msa1211930:intron 65.0%
GCGCTTGTGGGTGATGCTGC+TGG - chr8_1:71764365-71764384 Msa1211930:intron 65.0%
GAGTGGGAGGATGTGCGCAG+AGG - chr8_1:71764433-71764452 Msa1211930:CDS 65.0%
! GCGGCGGTGGGAGATGGGTT+TGG + chr8_1:71762873-71762892 None:intergenic 70.0%
CGCCGATGACAGCGACACGG+AGG + chr8_1:71762946-71762965 None:intergenic 70.0%
! CGTGTCGCTGTCATCGGCGG+TGG - chr8_1:71762947-71762966 Msa1211930:three_prime_UTR 70.0%
GTCATCGGCGGTGGTCCAGC+AGG - chr8_1:71762956-71762975 Msa1211930:three_prime_UTR 70.0%
ATCGGCGGTGGTCCAGCAGG+TGG - chr8_1:71762959-71762978 Msa1211930:three_prime_UTR 70.0%
GTCAGGGAGGGTCGCGCTTG+TGG - chr8_1:71764352-71764371 Msa1211930:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 71762632 71765270 71762632 ID=Msa1211930;Name=Msa1211930
chr8_1 mRNA 71762632 71765270 71762632 ID=Msa1211930-mRNA-1;Parent=Msa1211930;Name=Msa1211930-mRNA-1;_AED=0.00;_eAED=0.00;_QI=162|1|1|1|1|1|2|486|462
chr8_1 exon 71762632 71763819 71762632 ID=Msa1211930-mRNA-1:exon:24148;Parent=Msa1211930-mRNA-1
chr8_1 exon 71764422 71765270 71764422 ID=Msa1211930-mRNA-1:exon:24147;Parent=Msa1211930-mRNA-1
chr8_1 five_prime_UTR 71765109 71765270 71765109 ID=Msa1211930-mRNA-1:five_prime_utr;Parent=Msa1211930-mRNA-1
chr8_1 CDS 71764422 71765108 71764422 ID=Msa1211930-mRNA-1:cds;Parent=Msa1211930-mRNA-1
chr8_1 CDS 71763118 71763819 71763118 ID=Msa1211930-mRNA-1:cds;Parent=Msa1211930-mRNA-1
chr8_1 three_prime_UTR 71762632 71763117 71762632 ID=Msa1211930-mRNA-1:three_prime_utr;Parent=Msa1211930-mRNA-1
Gene Sequence

>Msa1211930

ATGAGCTCCATTGCCCTCAAATCCTTCCTCGGCCTCCGCATTTCCTCACCAGAAACCACCCAATTCTCCTACCGCCCCAAACCCATCTCCCACCGCCGCAAATTCACCGTCGTTGCTGCAGCAACCAGCCCAAAAATCGATGGCCGTAACCTCCGTGTCGCTGTCATCGGCGGTGGTCCAGCAGGTGGTGCAGCAGCAGAAACACTAGCAAAAGGTGGAATAGAAACCTTCCTCATCGAACGTAAAATGGACAACTGCAAACCATGTGGAGGAGCCATTCCTCTCTGCATGGTTGGTGAGTTCGACCTTCCACTAGACATCATTGACCGCCGTGTTACCAAGATGAAGATGATTTCTCCGTCGAATGTCGCCGTCGACATTGGTAGGACACTTAAGTCTCATGAGTATATTGGTATGGTGAGGCGTGAGGTGCTTGATGATTATCTTAGAAATAGGGCTAAGGAAAATGGAGCGAATATTATCAATGGGTTGTTTTTGAAAATGGATATTCCTAAACAAAAGAATGCGCCTTATGTTCTTCATTATTCTTCTTATGATGGGAAAACTGGTGGGGTTGGTGAAAAAACTACTTTGGAAGTTGATGCTGTTATTGGTGCTGATGGAGCTAATTCTAGAGTTGCTAAGTCTATTGATGCTGGTGATTATGAATATGCTATTGCATTTCAGGAGAGGATAAAAATCCCGGATGACAAAATGACTTATTACGAGGATCTTGCGGAGATGTATGTGGGTGACGACGTTTCTCCTGACTTCTATGGTTGGGTGTTCCCAAAATGTGACCATGTTGCTGTCGGCACCGGAACTGTGACACACAAGGGAGACATCAAGAAATTCCAACTAGCAACAAGGAAAAGAGCCGAGGACAAGATCTTAGGGGGCAAGATTATCCGTGTGGAGGCTCACCCTATACCAGAACATCCAAGGCCACGAAGATTGTCAGGGAGGGTCGCGCTTGTGGGTGATGCTGCTGGCTACGTGACCAAATGTTCTGGAGAAGGAATCTATTTCGCAGCCAAGAGTGGGAGGATGTGCGCAGAGGCAATTGTGCAGGGTTCGGCGAATGGGAAGAGGATGGTTGAAGAAGGGGATTTGAGGAAATATTTGGAGAAATGGGACAAGACATATTGGCCTACTTATAAGGTTTTGGATATTCTTCAGAAGGTGTTTTACAGGTCCAATCCTGCTAGGGAAGCTTTTGTTGAAATGTGTGCTGATGAATATGTGCAGAAGATGACATTTGATAGTTATCTGTACAAGACTGTTGTGCCTGGGAGTCCATTGGAGGATATCAAGTTGGCTATCAACACCATTGGGAGCTTGGTTAGGGCTAATGCTCTAAGGAGGGAGATGGACAAACTTAATGTATGA

Protein sequence

>Msa1211930

MSSIALKSFLGLRISSPETTQFSYRPKPISHRRKFTVVAAATSPKIDGRNLRVAVIGGGPAGGAAAETLAKGGIETFLIERKMDNCKPCGGAIPLCMVGEFDLPLDIIDRRVTKMKMISPSNVAVDIGRTLKSHEYIGMVRREVLDDYLRNRAKENGANIINGLFLKMDIPKQKNAPYVLHYSSYDGKTGGVGEKTTLEVDAVIGADGANSRVAKSIDAGDYEYAIAFQERIKIPDDKMTYYEDLAEMYVGDDVSPDFYGWVFPKCDHVAVGTGTVTHKGDIKKFQLATRKRAEDKILGGKIIRVEAHPIPEHPRPRRLSGRVALVGDAAGYVTKCSGEGIYFAAKSGRMCAEAIVQGSANGKRMVEEGDLRKYLEKWDKTYWPTYKVLDILQKVFYRSNPAREAFVEMCADEYVQKMTFDSYLYKTVVPGSPLEDIKLAINTIGSLVRANALRREMDKLNV*