AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0087450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087450 MtrunA17_Chr1g0204321 98.314 771 13 0 1 771 12 782 0.0 1570
Msa0087450 MtrunA17_Chr4g0053781 51.245 763 348 7 9 767 14 756 0.0 799
Msa0087450 MtrunA17_Chr2g0300751 50.575 783 359 10 2 767 3 774 0.0 779
Msa0087450 MtrunA17_Chr4g0037221 49.548 775 351 12 14 771 22 773 0.0 743
Msa0087450 MtrunA17_Chr5g0401511 49.103 780 362 9 1 767 5 762 0.0 734
Msa0087450 MtrunA17_Chr1g0152771 48.771 773 361 11 10 767 12 764 0.0 717
Msa0087450 MtrunA17_Chr4g0020651 48.721 782 362 10 1 767 1 758 0.0 712
Msa0087450 MtrunA17_Chr4g0070391 49.032 775 353 12 4 767 10 753 0.0 711
Msa0087450 MtrunA17_Chr8g0344971 48.425 762 357 9 23 771 27 765 0.0 681
Msa0087450 MtrunA17_Chr3g0134621 46.565 786 352 11 1 767 1 737 0.0 670
Msa0087450 MtrunA17_Chr8g0344331 48.349 757 354 15 24 763 36 772 0.0 660
Msa0087450 MtrunA17_Chr7g0246461 45.232 776 365 11 9 767 9 741 0.0 643
Msa0087450 MtrunA17_Chr7g0262161 45.778 758 375 15 25 767 26 762 0.0 630
Msa0087450 MtrunA17_Chr4g0076611 43.865 709 369 13 70 765 1 693 0.0 577
Msa0087450 MtrunA17_Chr3g0120521 42.437 714 384 13 65 765 70 769 0.0 577
Msa0087450 MtrunA17_Chr8g0369891 41.854 755 397 13 21 765 30 752 0.0 568
Msa0087450 MtrunA17_Chr5g0407701 42.727 770 396 17 9 765 12 749 0.0 561
Msa0087450 MtrunA17_Chr8g0345981 41.762 783 402 21 8 766 6 758 0.0 557
Msa0087450 MtrunA17_Chr4g0057531 42.556 759 407 17 23 765 31 776 0.0 549
Msa0087450 MtrunA17_Chr1g0189251 39.290 789 425 18 1 768 1 756 0.0 548
Msa0087450 MtrunA17_Chr4g0057471 44.180 713 373 16 67 766 9 709 0.0 547
Msa0087450 MtrunA17_Chr4g0057481 45.214 679 352 13 99 767 23 691 0.0 543
Msa0087450 MtrunA17_Chr8g0345991 40.788 787 412 21 1 766 1 754 0.0 542
Msa0087450 MtrunA17_Chr8g0345971 38.812 791 431 18 1 768 1 761 0.0 541
Msa0087450 MtrunA17_Chr4g0026641 41.473 774 411 21 4 763 6 751 0.0 536
Msa0087450 MtrunA17_Chr4g0057061 42.245 793 375 25 11 767 31 776 2.01e-180 535
Msa0087450 MtrunA17_Chr2g0285111 41.622 740 385 15 61 767 62 787 1.63e-175 523
Msa0087450 MtrunA17_Chr2g0285121 42.282 745 374 17 63 768 58 785 2.10e-175 523
Msa0087450 MtrunA17_Chr8g0354771 41.688 770 405 16 13 761 13 759 4.40e-174 519
Msa0087450 MtrunA17_Chr1g0189561 39.922 774 426 17 4 765 14 760 1.15e-173 518
Msa0087450 MtrunA17_Chr7g0248871 38.412 781 439 18 1 765 9 763 2.59e-173 517
Msa0087450 MtrunA17_Chr8g0345961 38.981 785 421 19 4 766 9 757 1.15e-171 513
Msa0087450 MtrunA17_Chr5g0423261 44.921 630 330 11 147 767 2 623 1.81e-169 502
Msa0087450 MtrunA17_Chr7g0276151 38.590 780 433 15 4 768 10 758 2.38e-169 506
Msa0087450 MtrunA17_Chr4g0057491 44.356 629 333 11 148 767 3 623 4.74e-167 496
Msa0087450 MtrunA17_Chr7g0250481 38.599 785 424 22 23 765 29 797 1.71e-166 500
Msa0087450 MtrunA17_Chr5g0398331 40.873 756 390 15 25 768 43 753 4.03e-166 498
Msa0087450 MtrunA17_Chr7g0250371 39.464 783 426 22 13 765 20 784 9.06e-166 498
Msa0087450 MtrunA17_Chr5g0398311 41.301 753 387 14 25 768 43 749 2.64e-165 496
Msa0087450 MtrunA17_Chr5g0398241 41.138 756 390 18 25 768 44 756 1.83e-162 489
Msa0087450 MtrunA17_Chr2g0303881 39.252 749 406 17 36 766 9 726 3.20e-162 487
Msa0087450 MtrunA17_Chr4g0057511 43.860 627 329 13 152 767 3 617 4.78e-162 483
Msa0087450 MtrunA17_Chr8g0377961 38.701 770 429 15 13 765 31 774 1.94e-161 487
Msa0087450 MtrunA17_Chr3g0136151 41.111 720 388 18 66 766 60 762 6.86e-161 485
Msa0087450 MtrunA17_Chr5g0398401 40.662 755 393 18 25 767 44 755 1.47e-160 484
Msa0087450 MtrunA17_Chr7g0250411 38.599 785 429 23 13 765 20 783 3.30e-160 484
Msa0087450 MtrunA17_Chr3g0143251 40.358 726 386 19 66 768 66 767 6.09e-159 480
Msa0087450 MtrunA17_Chr5g0398351 40.921 760 397 13 18 767 18 735 8.95e-159 499
Msa0087450 MtrunA17_Chr5g0398351 40.903 753 394 14 25 767 795 1506 7.04e-156 491
Msa0087450 MtrunA17_Chr7g0266051 41.111 720 377 21 58 765 21 705 1.25e-158 477
Msa0087450 MtrunA17_Chr7g0250391 37.736 795 440 23 4 765 10 782 3.26e-157 476
Msa0087450 MtrunA17_Chr8g0351011 40.463 734 375 21 52 769 67 754 4.93e-157 474
Msa0087450 MtrunA17_Chr8g0334521 38.028 781 411 23 4 768 13 736 1.28e-156 473
Msa0087450 MtrunA17_Chr7g0227991 38.217 785 410 23 1 765 4 733 1.51e-156 473
Msa0087450 MtrunA17_Chr4g0057461 42.138 636 340 17 148 765 3 628 3.23e-155 466
Msa0087450 MtrunA17_Chr7g0246451 40.056 714 378 19 67 769 74 748 1.83e-154 468
Msa0087450 MtrunA17_Chr7g0250331 38.250 800 424 26 18 765 25 806 1.54e-153 467
Msa0087450 MtrunA17_Chr8g0354741 42.746 641 332 13 137 765 16 633 6.68e-152 457
Msa0087450 MtrunA17_Chr6g0470851 39.360 719 368 24 62 765 64 729 1.51e-149 454
Msa0087450 MtrunA17_Chr1g0146271 39.394 759 388 26 24 768 35 735 4.17e-149 453
Msa0087450 MtrunA17_Chr1g0170081 37.227 779 421 22 1 768 12 733 7.89e-148 450
Msa0087450 MtrunA17_Chr1g0146251 39.972 723 369 24 62 768 64 737 7.79e-147 447
Msa0087450 MtrunA17_Chr6g0470881 39.470 717 365 24 64 765 67 729 2.53e-146 446
Msa0087450 MtrunA17_Chr3g0079971 36.650 794 410 29 4 768 5 734 1.02e-144 442
Msa0087450 MtrunA17_Chr5g0439271 42.645 605 312 15 185 765 8 601 3.73e-141 428
Msa0087450 MtrunA17_Chr8g0334491 37.466 734 377 25 58 769 58 731 4.75e-141 432
Msa0087450 MtrunA17_Chr7g0248861 39.839 620 339 16 18 622 22 622 2.51e-135 421
Msa0087450 MtrunA17_Chr7g0248861 49.356 233 115 3 131 362 629 859 2.90e-56 207
Msa0087450 MtrunA17_Chr8g0376841 40.342 585 284 18 23 584 39 581 3.02e-120 374
Msa0087450 MtrunA17_Chr2g0301011 38.899 563 244 19 98 647 3 478 3.39e-104 329
Msa0087450 MtrunA17_Chr2g0298601 33.423 742 425 25 71 763 90 811 1.05e-101 332
Msa0087450 MtrunA17_Chr4g0071871 32.577 749 434 23 71 769 90 817 2.21e-100 328
Msa0087450 MtrunA17_Chr7g0261691 44.868 341 173 6 144 475 13 347 1.94e-90 288
Msa0087450 MtrunA17_Chr2g0302951 30.937 779 457 29 46 767 86 840 4.02e-88 296
Msa0087450 MtrunA17_Chr5g0447171 36.276 521 256 13 299 765 9 507 5.98e-87 284
Msa0087450 MtrunA17_Chr4g0075331 30.475 758 460 23 58 769 3 739 1.38e-86 289
Msa0087450 MtrunA17_Chr3g0143241 36.518 471 265 12 15 475 26 472 1.25e-83 276
Msa0087450 MtrunA17_Chr7g0250461 36.111 468 262 15 13 457 20 473 5.08e-81 268
Msa0087450 MtrunA17_Chr8g0380961 30.371 754 440 28 71 765 118 845 1.23e-79 273
Msa0087450 MtrunA17_Chr6g0480721 44.025 318 158 6 70 384 5 305 1.56e-76 259
Msa0087450 MtrunA17_Chr6g0480721 40.446 314 174 6 453 765 298 599 6.72e-60 214
Msa0087450 MtrunA17_Chr7g0261701 45.196 281 143 6 486 765 19 289 1.96e-74 243
Msa0087450 MtrunA17_Chr4g0026651 43.987 316 141 6 85 367 2 314 3.46e-74 243
Msa0087450 MtrunA17_Chr4g0035881 40.000 370 158 8 223 584 4 317 4.57e-68 228
Msa0087450 MtrunA17_Chr3g0097061 40.000 325 158 11 98 413 3 299 3.20e-63 218
Msa0087450 MtrunA17_Chr3g0097061 54.167 96 36 2 543 638 330 417 1.19e-23 104
Msa0087450 MtrunA17_Chr8g0346361 41.026 312 156 8 467 768 206 499 7.39e-63 219
Msa0087450 MtrunA17_Chr8g0346361 44.554 202 93 5 161 360 4 188 3.44e-46 172
Msa0087450 MtrunA17_Chr7g0250441 46.127 284 144 6 485 765 5 282 9.96e-63 213
Msa0087450 MtrunA17_Chr4g0026661 44.706 255 129 8 512 763 12 257 1.35e-59 202
Msa0087450 MtrunA17_Chr3g0105461 38.384 297 137 6 66 358 65 319 1.16e-55 195
Msa0087450 MtrunA17_Chr2g0312861 41.923 260 131 8 512 765 1 246 1.29e-52 185
Msa0087450 MtrunA17_Chr3g0105451 40.411 292 142 10 486 766 9 279 2.26e-52 183
Msa0087450 MtrunA17_Chr2g0301911 36.388 371 180 16 161 515 30 360 4.12e-51 183
Msa0087450 MtrunA17_Chr2g0301031 41.699 259 133 8 512 765 1 246 7.09e-51 178
Msa0087450 MtrunA17_Chr3g0103071 35.540 287 175 5 271 551 1 283 1.64e-47 170
Msa0087450 MtrunA17_Chr3g0103061 36.122 263 156 5 5 263 8 262 4.44e-46 165
Msa0087450 MtrunA17_Chr2g0312841 41.327 196 97 4 161 354 9 188 6.52e-40 145
Msa0087450 MtrunA17_Chr4g0071191 41.827 208 102 5 493 695 57 250 9.03e-40 147
Msa0087450 MtrunA17_Chr5g0436021 48.193 166 73 3 186 348 31 186 4.69e-38 140
Msa0087450 MtrunA17_Chr2g0301921 37.788 217 119 7 553 765 1 205 4.56e-35 132
Msa0087450 MtrunA17_Chr5g0418921 47.826 138 67 3 481 615 1 136 1.65e-31 121
Msa0087450 MtrunA17_Chr3g0077671 82.192 73 12 1 543 614 236 308 6.43e-30 120
Msa0087450 MtrunA17_Chr2g0301021 28.217 443 195 18 9 437 10 343 6.92e-30 122
Msa0087450 MtrunA17_Chr7g0248851 40.268 149 83 3 620 765 1 146 6.41e-28 110
Msa0087450 MtrunA17_Chr3g0143021 43.925 107 57 1 66 172 3 106 4.22e-24 97.8
Msa0087450 MtrunA17_Chr5g0439281 35.196 179 101 5 4 173 8 180 8.53e-24 99.8
Msa0087450 MtrunA17_Chr3g0143231 57.778 90 37 1 495 584 1 89 9.84e-24 95.9
Msa0087450 MtrunA17_Chr3g0142971 58.140 86 35 1 495 580 1 85 4.81e-23 94.0
Msa0087450 MtrunA17_Chr3g0142981 36.994 173 69 3 211 369 47 193 6.37e-23 97.4
Msa0087450 MtrunA17_Chr5g0436031 35.542 166 102 2 600 765 20 180 1.35e-21 94.0
Msa0087450 MtrunA17_Chr8g0376851 34.524 168 102 4 601 765 9 171 2.47e-21 92.0
Msa0087450 MtrunA17_Chr3g0103081 38.255 149 86 5 620 767 1 144 2.67e-21 90.9
Msa0087450 MtrunA17_Chr5g0398341 51.613 93 28 3 553 637 1 84 1.07e-19 84.7
Msa0087450 MtrunA17_Chr8g0346351 34.356 163 93 6 5 167 17 165 1.23e-17 81.3
Msa0087450 MtrunA17_Chr4g0035871 32.331 133 61 2 67 185 33 150 9.10e-16 75.5
Msa0087450 MtrunA17_Chr3g0143011 56.000 50 22 0 309 358 1 50 2.50e-13 65.5
Msa0087450 MtrunA17_Chr3g0143221 31.765 170 92 7 603 766 12 163 2.58e-13 68.6
Msa0087450 MtrunA17_Chr4g0057521 41.304 92 51 2 58 147 7 97 1.07e-12 66.6
Msa0087450 MtrunA17_Chr3g0142961 34.109 129 76 5 603 725 12 137 1.12e-12 65.9
Msa0087450 MtrunA17_Chr4g0057501 45.882 85 43 2 67 149 47 130 3.54e-12 64.3
Msa0087450 MtrunA17_Chr8g0346961 29.167 120 79 3 582 698 1 117 9.92e-12 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0087450 AT5G51750.1 70.026 774 216 5 10 771 11 780 0.0 1120
Msa0087450 AT5G67360.1 51.100 773 351 9 2 767 4 756 0.0 788
Msa0087450 AT2G05920.1 50.852 763 342 9 10 767 17 751 0.0 753
Msa0087450 AT3G14240.1 49.410 763 356 9 25 771 27 775 0.0 737
Msa0087450 AT4G34980.1 48.780 779 366 10 2 768 4 761 0.0 728
Msa0087450 AT3G14067.1 48.221 759 358 13 24 767 31 769 0.0 689
Msa0087450 AT1G04110.1 44.000 775 406 13 8 766 9 771 0.0 621
Msa0087450 AT1G01900.1 44.768 755 385 10 23 767 41 773 0.0 609
Msa0087450 AT2G04160.1 44.585 711 368 13 68 765 73 770 0.0 592
Msa0087450 AT5G59810.1 41.347 757 411 15 22 765 38 774 0.0 548
Msa0087450 AT5G45650.2 40.304 789 403 16 23 766 24 789 6.92e-180 535
Msa0087450 AT5G45650.1 40.304 789 403 16 23 766 24 789 6.92e-180 535
Msa0087450 AT1G20160.2 40.979 715 385 16 70 766 28 723 2.77e-165 495
Msa0087450 AT1G20160.1 40.979 715 385 16 70 766 67 762 8.41e-165 495
Msa0087450 AT4G00230.1 41.352 769 386 22 16 769 28 746 6.23e-164 493
Msa0087450 AT5G67090.1 38.521 771 393 18 4 755 8 716 1.90e-159 481
Msa0087450 AT5G59090.1 38.654 758 395 19 24 768 31 731 5.75e-159 479
Msa0087450 AT5G59120.1 38.992 754 394 18 23 765 29 727 1.49e-158 478
Msa0087450 AT5G59090.3 38.940 755 395 21 24 768 31 729 1.52e-158 478
Msa0087450 AT4G10520.1 38.630 774 429 18 4 765 5 744 4.73e-158 478
Msa0087450 AT5G59090.2 38.675 755 394 20 24 768 31 726 2.52e-157 475
Msa0087450 AT5G58840.1 37.792 770 400 19 1 765 11 706 3.82e-157 474
Msa0087450 AT4G10550.1 38.314 783 425 19 11 765 14 766 4.20e-154 468
Msa0087450 AT5G59190.1 40.845 710 363 21 70 770 32 693 7.42e-154 464
Msa0087450 AT4G10550.3 38.138 784 423 19 12 765 31 782 2.59e-153 466
Msa0087450 AT4G10550.4 39.834 723 386 16 67 765 13 710 2.63e-153 464
Msa0087450 AT4G10550.2 39.834 723 386 16 67 765 13 710 2.63e-153 464
Msa0087450 AT4G26330.2 38.536 724 406 18 64 765 15 721 6.32e-153 463
Msa0087450 AT5G03620.1 38.636 792 414 24 4 765 9 758 1.09e-152 464
Msa0087450 AT1G32940.1 38.158 760 427 16 24 765 28 762 2.47e-152 463
Msa0087450 AT5G59100.1 38.990 713 384 17 67 768 68 740 5.99e-151 459
Msa0087450 AT1G32940.4 38.851 731 409 15 53 765 1 711 9.99e-151 457
Msa0087450 AT1G32940.2 38.851 731 409 15 53 765 1 711 9.99e-151 457
Msa0087450 AT1G32960.1 37.760 768 431 18 18 765 25 765 3.24e-149 455
Msa0087450 AT4G26330.1 37.805 738 406 19 64 765 15 735 6.23e-149 454
Msa0087450 AT1G20150.1 38.820 729 390 18 71 766 66 771 2.13e-148 453
Msa0087450 AT4G10530.1 36.889 778 428 18 4 765 5 735 5.64e-148 451
Msa0087450 AT5G58830.1 36.598 776 401 21 1 765 10 705 7.01e-147 447
Msa0087450 AT5G58820.1 37.484 771 391 20 8 765 8 700 1.36e-146 446
Msa0087450 AT3G46850.1 38.452 775 417 22 3 765 8 734 1.17e-145 445
Msa0087450 AT4G10510.2 38.981 726 381 18 70 765 1 694 3.08e-145 443
Msa0087450 AT4G10540.1 36.849 787 440 20 7 765 6 763 4.83e-145 444
Msa0087450 AT4G10510.4 38.934 732 386 18 65 765 8 709 8.14e-145 442
Msa0087450 AT1G32950.1 37.389 789 436 19 2 765 6 761 1.16e-144 443
Msa0087450 AT4G10510.3 37.247 792 420 21 11 765 14 765 1.16e-144 444
Msa0087450 AT4G10510.1 38.934 732 386 18 65 765 52 753 3.06e-144 442
Msa0087450 AT1G32950.2 39.281 723 388 17 68 765 14 710 1.20e-143 439
Msa0087450 AT5G59130.4 35.696 776 425 21 2 765 12 725 9.05e-143 437
Msa0087450 AT3G46840.1 37.967 777 417 24 1 765 11 734 1.03e-142 437
Msa0087450 AT5G59130.2 35.825 776 414 22 2 765 12 715 4.35e-141 432
Msa0087450 AT5G59130.3 36.996 719 387 19 59 765 22 686 8.60e-141 431
Msa0087450 AT5G59130.1 35.567 776 422 22 2 765 12 721 1.92e-140 431
Msa0087450 AT1G66220.1 36.317 782 431 21 2 765 12 744 3.48e-140 431
Msa0087450 AT4G21650.1 36.269 772 411 21 24 765 40 760 2.02e-138 427
Msa0087450 AT4G21630.1 35.456 801 430 22 2 765 3 753 4.40e-136 421
Msa0087450 AT1G66210.1 35.135 777 446 18 3 765 18 750 5.87e-136 421
Msa0087450 AT5G11940.1 36.364 759 424 20 24 765 36 752 1.81e-135 419
Msa0087450 AT5G45640.1 36.218 751 407 18 65 766 25 752 4.12e-134 416
Msa0087450 AT4G15040.2 36.842 722 396 16 51 765 17 685 2.61e-130 403
Msa0087450 AT4G15040.1 36.842 722 396 16 51 765 17 685 2.61e-130 403
Msa0087450 AT4G00230.2 42.808 577 286 15 16 584 28 568 7.71e-128 394
Msa0087450 AT5G03620.2 40.336 595 315 15 4 585 9 576 1.13e-125 388
Msa0087450 AT5G58840.3 39.353 587 289 15 1 585 11 532 5.93e-124 382
Msa0087450 AT4G21326.1 35.359 724 414 17 58 765 2 687 1.15e-122 384
Msa0087450 AT4G21323.1 34.570 755 433 20 26 763 81 791 1.19e-121 384
Msa0087450 AT1G32940.3 38.983 590 323 13 24 596 28 597 1.80e-117 367
Msa0087450 AT1G32970.1 40.278 576 309 14 206 765 166 722 1.73e-111 355
Msa0087450 AT2G19170.1 32.387 775 447 22 47 764 55 809 4.11e-105 341
Msa0087450 AT2G19170.2 32.387 775 447 22 47 764 55 809 4.11e-105 341
Msa0087450 AT4G30020.3 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0087450 AT4G30020.1 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0087450 AT4G30020.4 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0087450 AT4G30020.2 32.974 743 431 21 71 764 86 810 1.55e-103 337
Msa0087450 AT1G20160.3 41.228 456 242 9 70 513 67 508 2.44e-99 318
Msa0087450 AT5G44530.1 32.527 744 437 24 71 765 106 833 8.80e-99 325
Msa0087450 AT4G20430.3 32.672 756 424 31 71 766 119 849 1.53e-95 317
Msa0087450 AT4G20430.1 32.672 756 424 31 71 766 119 849 1.53e-95 317
Msa0087450 AT1G30600.1 31.740 753 436 25 71 767 98 828 5.09e-95 315
Msa0087450 AT1G62340.1 32.097 782 449 25 47 765 67 829 3.23e-94 312
Msa0087450 AT5G44530.2 31.599 769 436 26 71 765 106 858 6.93e-94 312
Msa0087450 AT4G20430.2 32.483 745 416 30 71 766 119 825 2.82e-93 310
Msa0087450 AT5G58840.2 35.922 515 263 15 1 513 11 460 3.19e-88 286
Msa0087450 AT2G39850.1 30.230 784 461 25 23 765 27 765 3.47e-88 295
Msa0087450 AT4G21640.1 37.596 391 206 8 8 367 11 394 2.41e-70 245
Msa0087450 AT4G21640.1 38.762 307 169 8 464 765 435 727 1.55e-48 183
Msa0087450 AT5G44530.3 32.530 498 291 15 71 528 106 598 5.82e-62 220
Msa0087450 AT1G32980.1 42.781 187 101 3 549 734 3 184 6.60e-37 137
Msa0087450 AT5G59110.1 35.185 162 98 3 609 765 7 166 1.01e-22 96.3

Find 164 sgRNAs with CRISPR-Local

Find 218 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAGAAAATTTAATTATA+AGG 0.168935 1_2:+68403542 None:intergenic
GTCATTGTTACACCATTTAA+AGG 0.178184 1_2:-68400827 Msa0087450:CDS
GCTGCTTGGAGTGGACTTAC+TGG 0.235422 1_2:-68401364 Msa0087450:CDS
CACACCAAACCTCCAAATTC+TGG 0.235592 1_2:+68400704 None:intergenic
TCATGTTCAGCTGGAAATTC+AGG 0.240133 1_2:-68401991 Msa0087450:CDS
TGTAGTTGGTACTTTGTATC+TGG 0.249389 1_2:+68403111 None:intergenic
GTTCATGGTGCTAATCTTCT+TGG 0.267962 1_2:-68402727 Msa0087450:CDS
TGTAACAATGACATGATATT+TGG 0.274740 1_2:+68400838 None:intergenic
TTAACAACAGCGCCTTTAAA+TGG 0.275106 1_2:+68400815 None:intergenic
CTTGTAAAATTCAATGTATC+TGG 0.289773 1_2:+68400785 None:intergenic
TGAAGAAAATTTAATTATAA+GGG 0.294452 1_2:+68403543 None:intergenic
AGGCAAAGTGAACCAGAATT+TGG 0.295595 1_2:-68400716 Msa0087450:CDS
TTAACCCTTCTATGATCTAT+TGG 0.295681 1_2:+68401328 None:intergenic
GTGAATCGTCGAAGCAAAAT+TGG 0.296323 1_2:+68400892 None:intergenic
GTACTTTGTATCTGGGAATA+TGG 0.302816 1_2:+68403119 None:intergenic
GTTAAGTTTAACATACTTTC+CGG 0.306723 1_2:-68401310 Msa0087450:CDS
ATAGCAGCTGGACTCCATTC+AGG 0.318680 1_2:+68401229 None:intergenic
GGTTCAAGACCAAGGAAATA+TGG 0.331175 1_2:+68403075 None:intergenic
GAGTCTTAGACACTGGTATT+TGG 0.332570 1_2:-68402993 Msa0087450:CDS
GTTTACCAATAGATCATAGA+AGG 0.337442 1_2:-68401333 Msa0087450:CDS
AGTTTATCTGTAGCTTCATT+TGG 0.341083 1_2:-68402039 Msa0087450:CDS
CTTTATTTCCATTGCACTGC+TGG 0.341417 1_2:-68403646 Msa0087450:five_prime_UTR
ACAATACCCGTTGGTTTACA+TGG 0.345106 1_2:-68401809 Msa0087450:CDS
ACACCAGGTGCTACTATATC+AGG 0.364343 1_2:+68401397 None:intergenic
GATGAAAATGCTGCTACTAT+AGG 0.369103 1_2:+68401457 None:intergenic
TGAACCAGAATTTGGAGGTT+TGG 0.376243 1_2:-68400708 Msa0087450:CDS
TGATCTATTGGTAAACTTGA+TGG 0.377526 1_2:+68401340 None:intergenic
CCATGACCATCTTGATCTCT+TGG 0.381927 1_2:+68402784 None:intergenic
CTTCAATCACCAACCTCTAT+AGG 0.387330 1_2:-68403724 None:intergenic
AATCTTCTTGGTTATGCCTA+TGG 0.387556 1_2:-68402715 Msa0087450:CDS
TCAGGAGCATCAATCTATAA+AGG 0.389240 1_2:-68401856 Msa0087450:CDS
GAGGTTTGGTGTGGAAAGAT+AGG 0.390179 1_2:-68400694 Msa0087450:CDS
AGTGAGAGTTTCATTGATAC+AGG 0.401477 1_2:-68402964 Msa0087450:CDS
AGGACATGACATTGAAGTTC+CGG 0.408580 1_2:+68401291 None:intergenic
CACACTGCAGCTACTGTTGC+CGG 0.410503 1_2:-68402757 Msa0087450:CDS
GTTGCCGGATCTCCGGTTCA+TGG 0.413429 1_2:-68402742 Msa0087450:CDS
TGATCCAAGATCTTTGTGTT+TGG 0.414895 1_2:-68401767 Msa0087450:CDS
ACGGTTGATTCTTGTTGAAT+TGG 0.417625 1_2:+68403673 None:intergenic
CATTGCAATAAGAAGATTGT+AGG 0.420094 1_2:-68402877 Msa0087450:CDS
CATTCCTCTTGCTGTTCCAT+AGG 0.422540 1_2:+68402699 None:intergenic
GACTTCTTGTTGTGTGTAGT+TGG 0.425321 1_2:+68403097 None:intergenic
TTCATTTGGAGCAATGGAAA+AGG 0.428283 1_2:-68402025 Msa0087450:CDS
CCTTCCAAACACAAAGATCT+TGG 0.429162 1_2:+68401763 None:intergenic
CATTTGGTTATAAAGTGAAA+TGG 0.430653 1_2:+68403515 None:intergenic
CAGCAGTGCAATGGAAATAA+AGG 0.431356 1_2:+68403647 None:intergenic
GCAGAAGAAGCATCTCTAAG+AGG 0.432819 1_2:+68401157 None:intergenic
AATTAGTCCAAGAGTGCAAA+AGG 0.434495 1_2:-68401689 Msa0087450:CDS
AACTTATGTTATTACAAGAA+TGG 0.435169 1_2:+68400459 None:intergenic
GGCATATATGTTATCACAAT+CGG 0.437021 1_2:+68400653 None:intergenic
AAGATTGTGATTTGTGATAG+AGG 0.446697 1_2:-68401712 Msa0087450:CDS
TTTGTGTTTGGAAGGCACTT+TGG 0.448585 1_2:-68401755 Msa0087450:CDS
AGCTACTGTTGCCGGATCTC+CGG 0.449003 1_2:-68402749 Msa0087450:CDS
CCTAGAAAAGCTCTTGATCC+AGG 0.449023 1_2:-68401091 Msa0087450:CDS
TGGAAAGGTGCATGTGAAAC+TGG 0.450416 1_2:-68402919 Msa0087450:CDS
TTATCCATCTCTTTAGGTGG+TGG 0.450538 1_2:-68402084 Msa0087450:CDS
GTAACTAGTCTTGGACTCCT+AGG 0.451698 1_2:+68400611 None:intergenic
TGAATACCACTCTGGGTGAC+TGG 0.456442 1_2:+68403302 None:intergenic
GCAGATGTTAGCCTTGGAAA+TGG 0.460229 1_2:-68401889 Msa0087450:CDS
AGCAGTAGCAGTAGGAGAAA+AGG 0.461044 1_2:-68401572 Msa0087450:CDS
CTCACAAACACTGCAGCAAA+TGG 0.464969 1_2:-68401628 Msa0087450:CDS
TGCTGAATAGTAACTAGTCT+TGG 0.467311 1_2:+68400602 None:intergenic
AAGCTACAGATAAACTATCA+TGG 0.467658 1_2:+68402046 None:intergenic
CCTTTCCAGTGAGAAGGTAC+TGG 0.468930 1_2:+68402934 None:intergenic
ATAGTTGGAGTCTTAGACAC+TGG 0.469054 1_2:-68403000 Msa0087450:CDS
CCAAGATCTTTGTGTTTGGA+AGG 0.470345 1_2:-68401763 Msa0087450:CDS
TCAGTTTCAAAGTGACATCT+AGG 0.470839 1_2:-68400736 Msa0087450:CDS
GTGTGAACATTCTTGCTGCT+TGG 0.471231 1_2:-68401378 Msa0087450:CDS
TTTCCTGCAGATGTTAGCCT+TGG 0.473741 1_2:-68401895 Msa0087450:CDS
AGCACCATGAACCGGAGATC+CGG 0.473779 1_2:+68402738 None:intergenic
GCTAACCATGATGTTATAGT+TGG 0.475358 1_2:-68403015 Msa0087450:CDS
AACATTCTTGCTGCTTGGAG+TGG 0.477323 1_2:-68401373 Msa0087450:CDS
ATGTCATGTCCTCATGTAAG+TGG 0.481265 1_2:-68401280 Msa0087450:CDS
CTGTTGCTGCTTCATATCCA+TGG 0.481970 1_2:+68402839 None:intergenic
GTAGTTGGTACTTTGTATCT+GGG 0.485251 1_2:+68403112 None:intergenic
TGCTTCCCATGTAAACCAAC+GGG 0.486395 1_2:+68401803 None:intergenic
CATGGATATGAAGCAGCAAC+AGG 0.490558 1_2:-68402838 Msa0087450:CDS
GAAACATTTGTGAGACTGAC+AGG 0.491134 1_2:+68401961 None:intergenic
ATCTTCCTTGCTTGTATACA+CGG 0.491848 1_2:-68403472 Msa0087450:five_prime_UTR
AGTATATGATATCGAACCTC+AGG 0.493737 1_2:-68401065 Msa0087450:CDS
TCCAAGAGTGCAAAAGGGCC+AGG 0.494894 1_2:-68401683 Msa0087450:CDS
TTTGTGAGACTGACAGGGTC+AGG 0.495230 1_2:+68401967 None:intergenic
TGGCCAGCACCATGATCATA+AGG 0.495707 1_2:+68401121 None:intergenic
TGTAGCTTCATTTGGAGCAA+TGG 0.496713 1_2:-68402031 Msa0087450:CDS
GGGTGACTGGAAAAGATGTC+TGG 0.499182 1_2:+68403315 None:intergenic
TTATTTAAGACTTAAGAGAA+AGG 0.500236 1_2:+68403594 None:intergenic
GGAAATGGAAGAAAATTCTC+AGG 0.500504 1_2:-68401874 Msa0087450:CDS
ACAAGAAGTCCATATTTCCT+TGG 0.505491 1_2:-68403084 Msa0087450:CDS
CACCGCACTGTTACCAATGT+TGG 0.506302 1_2:-68400872 Msa0087450:CDS
TTCAAAACACCAACAGAAGC+TGG 0.506627 1_2:-68403050 Msa0087450:CDS
ATTTCAAGTGTGAGTAAACT+AGG 0.508793 1_2:+68401427 None:intergenic
AAACACAAAGATCTTGGATC+AGG 0.511063 1_2:+68401769 None:intergenic
TCATTTGGAGCAATGGAAAA+GGG 0.512583 1_2:-68402024 Msa0087450:CDS
TTGGATCGTCGAACGGTCAC+GGG 0.513779 1_2:-68401736 Msa0087450:CDS
CAGAATTTGGAGGTTTGGTG+TGG 0.515812 1_2:-68400703 Msa0087450:CDS
TAACTAGTCTTGGACTCCTA+GGG 0.518676 1_2:+68400612 None:intergenic
CAAAGTGAACCAGAATTTGG+AGG 0.522433 1_2:-68400713 Msa0087450:CDS
AGAAGATTAGCACCATGAAC+CGG 0.523555 1_2:+68402730 None:intergenic
TTTCCAAGGCTAACATCTGC+AGG 0.523747 1_2:+68401892 None:intergenic
TCAATGAAACTCTCACTCTC+AGG 0.530295 1_2:+68402970 None:intergenic
TCAAAGCTAAACATCCTGAA+TGG 0.530445 1_2:-68401243 Msa0087450:CDS
GGTTATAAAGTGAAATGGAT+AGG 0.531723 1_2:+68403520 None:intergenic
ATTAAAAGAGCTACCTATAG+AGG 0.531856 1_2:+68403711 None:intergenic
TTGTTGAATTGGTAAATTGA+AGG 0.533971 1_2:+68403684 None:intergenic
ACACCTTATGATCATGGTGC+TGG 0.538752 1_2:-68401124 Msa0087450:CDS
GGGGAAGAACTTCACATTGG+TGG 0.539133 1_2:+68400632 None:intergenic
AGGTTTGGTGTGGAAAGATA+GGG 0.539280 1_2:-68400693 Msa0087450:CDS
ATCGTCGAAGCAAAATTGGT+TGG 0.539328 1_2:+68400896 None:intergenic
TTTGGATCGTCGAACGGTCA+CGG 0.541166 1_2:-68401737 Msa0087450:CDS
GTGTATACAAGCAAGGAAGA+TGG 0.541226 1_2:+68403474 None:intergenic
GCTCCAACCGTGGTGATCCA+TGG 0.546621 1_2:+68401937 None:intergenic
GGAAACACAACTGATATAGC+AGG 0.548430 1_2:+68400926 None:intergenic
AAATGCTTCTCACACTATTG+TGG 0.548640 1_2:+68400363 None:intergenic
TTGCAGCTTACAAAGTGTGT+TGG 0.551123 1_2:-68402176 Msa0087450:CDS
AGCTACAGATAAACTATCAT+GGG 0.558604 1_2:+68402047 None:intergenic
TGTTGAATTGGTAAATTGAA+GGG 0.559566 1_2:+68403685 None:intergenic
TGAGAATCCATTAAAAGAGA+AGG 0.560660 1_2:-68400489 Msa0087450:three_prime_UTR
TCGATATCATATACTAAACC+TGG 0.561273 1_2:+68401073 None:intergenic
GACTCCACCACCTAAAGAGA+TGG 0.565490 1_2:+68402080 None:intergenic
TCACCATGGATCACCACGGT+TGG 0.567091 1_2:-68401940 Msa0087450:CDS
ACATGATATTTGGAAACAGC+AGG 0.567192 1_2:+68400848 None:intergenic
TGAAACCAGTACCTTCTCAC+TGG 0.571834 1_2:-68402939 Msa0087450:CDS
CAATGTGAAGTTCTTCCCCT+AGG 0.572767 1_2:-68400628 Msa0087450:exon
CCAAGAGATCAAGATGGTCA+TGG 0.573050 1_2:-68402784 Msa0087450:CDS
GCTTACAAAGTGTGTTGGAC+TGG 0.581550 1_2:-68402171 Msa0087450:CDS
CATTGTGCTAGCTCCAACCG+TGG 0.583490 1_2:+68401927 None:intergenic
GGAAACAGCAGGACCAACAT+TGG 0.584506 1_2:+68400859 None:intergenic
TAGATAAGACTATACTCAAG+AGG 0.584910 1_2:+68403394 None:intergenic
TTTGAATTGGTTCAAGACCA+AGG 0.585704 1_2:+68403067 None:intergenic
CTACTGCTACTGCTGGAAGT+AGG 0.588254 1_2:+68401581 None:intergenic
TATGCCTATGGAACAGCAAG+AGG 0.591767 1_2:-68402703 Msa0087450:CDS
CAATACCCGTTGGTTTACAT+GGG 0.593314 1_2:-68401808 Msa0087450:CDS
TACAAAGTGTGTTGGACTGG+TGG 0.597149 1_2:-68402168 Msa0087450:CDS
TTGCTTCCCATGTAAACCAA+CGG 0.597540 1_2:+68401802 None:intergenic
CTATGGAACAGCAAGAGGAA+TGG 0.598450 1_2:-68402698 Msa0087450:CDS
CTACTTCCAGCAGTAGCAGT+AGG 0.599375 1_2:-68401580 Msa0087450:CDS
TTAGTGTGCCAGCAGTGCAA+TGG 0.601116 1_2:+68403638 None:intergenic
AGACTCCAACTATAACATCA+TGG 0.601238 1_2:+68403010 None:intergenic
GTTGATACAGCTGTAGCTGA+TGG 0.601842 1_2:-68402117 Msa0087450:CDS
CATGCACCTTTCCAGTGAGA+AGG 0.602893 1_2:+68402928 None:intergenic
AGTTAGAAAACAATACCCGT+TGG 0.603031 1_2:-68401818 Msa0087450:CDS
CTTAGCCGTGTATACAAGCA+AGG 0.603309 1_2:+68403467 None:intergenic
GGTGCATGTGAAACTGGTAG+AGG 0.604367 1_2:-68402913 Msa0087450:CDS
ATTAGTCCAAGAGTGCAAAA+GGG 0.604652 1_2:-68401688 Msa0087450:CDS
AATGCTGCTACTATAGGAGA+TGG 0.611627 1_2:+68401463 None:intergenic
TTTACCAATAGATCATAGAA+GGG 0.613414 1_2:-68401332 Msa0087450:CDS
ACAGCAAGAGGAATGGCACC+AGG 0.615072 1_2:-68402691 Msa0087450:intron
CCAGTACCTTCTCACTGGAA+AGG 0.621307 1_2:-68402934 Msa0087450:CDS
TCCTCATGTAAGTGGAATCG+CGG 0.624644 1_2:-68401272 Msa0087450:CDS
AGGCACTTTGGATCGTCGAA+CGG 0.635511 1_2:-68401743 Msa0087450:CDS
GCAGCAAGAATGTTCACACC+AGG 0.640405 1_2:+68401382 None:intergenic
CACGGTTGGAGCTAGCACAA+TGG 0.640840 1_2:-68401926 Msa0087450:CDS
GTCTCACAAATGTTTCACCA+TGG 0.646444 1_2:-68401954 Msa0087450:CDS
AAACCTGATATAGTAGCACC+TGG 0.653822 1_2:-68401400 Msa0087450:CDS
AAATCACCAAGAGATCAAGA+TGG 0.659141 1_2:-68402790 Msa0087450:CDS
AACTAGTCTTGGACTCCTAG+GGG 0.659885 1_2:+68400613 None:intergenic
GGTGCAAGAATATTCTACCA+TGG 0.660702 1_2:-68402856 Msa0087450:CDS
GCAATGGAAATAAAGGTGAA+CGG 0.662242 1_2:+68403654 None:intergenic
AGAAACTCAAAGTAATCCTG+AGG 0.669990 1_2:+68401049 None:intergenic
CTAGGGGAAGAACTTCACAT+TGG 0.680242 1_2:+68400629 None:intergenic
GCCGCGATTCCACTTACATG+AGG 0.688521 1_2:+68401271 None:intergenic
AAACATTTGTGAGACTGACA+GGG 0.693774 1_2:+68401962 None:intergenic
GTAGCAGTAGGAGAAAAGGA+AGG 0.705004 1_2:-68401568 Msa0087450:CDS
TGTTTCACCATGGATCACCA+CGG 0.715840 1_2:-68401944 Msa0087450:CDS
GACCAACATTGGTAACAGTG+CGG 0.756399 1_2:+68400870 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAGAAAATTTAATTATAA+GGG + chr1_2:68400493-68400512 None:intergenic 10.0%
!! GTGAAGAAAATTTAATTATA+AGG + chr1_2:68400494-68400513 None:intergenic 15.0%
!!! TTAACCATCTTTTATTTTTA+TGG - chr1_2:68401617-68401636 Msa0087450:CDS 15.0%
!!! TTATTTAAGACTTAAGAGAA+AGG + chr1_2:68400442-68400461 None:intergenic 20.0%
!! AAAAACTTACATCATTCATA+TGG - chr1_2:68400681-68400700 Msa0087450:CDS 20.0%
!!! CAAAATATTTTAGTAATACC+TGG + chr1_2:68401363-68401382 None:intergenic 20.0%
!!! CTTTTTTAAATTTTCCAATC+TGG + chr1_2:68401548-68401567 None:intergenic 20.0%
!!! AAACATTTTTCATTCTTTCT+AGG + chr1_2:68401733-68401752 None:intergenic 20.0%
!! AACATAAAGATAGTATTAGA+TGG + chr1_2:68401758-68401777 None:intergenic 20.0%
!! AAAAAACTACTAATTCTGAA+GGG + chr1_2:68403028-68403047 None:intergenic 20.0%
!!! TTATATACCTTCTCTTTTAA+TGG + chr1_2:68403554-68403573 None:intergenic 20.0%
!! AACTTATGTTATTACAAGAA+TGG + chr1_2:68403577-68403596 None:intergenic 20.0%
!!! ACATCTTTTTTTTTTTTTGG+TGG + chr1_2:68403627-68403646 None:intergenic 20.0%
!!! GTCACATCTTTTTTTTTTTT+TGG + chr1_2:68403630-68403649 None:intergenic 20.0%
! TGTTGAATTGGTAAATTGAA+GGG + chr1_2:68400351-68400370 None:intergenic 25.0%
! TTGTTGAATTGGTAAATTGA+AGG + chr1_2:68400352-68400371 None:intergenic 25.0%
! CATTTGGTTATAAAGTGAAA+TGG + chr1_2:68400521-68400540 None:intergenic 25.0%
!!! ACTAAGATTTTTGAAGCATT+TGG + chr1_2:68400537-68400556 None:intergenic 25.0%
! AGTTCATATGAAAATGAAGA+AGG - chr1_2:68401424-68401443 Msa0087450:CDS 25.0%
!!! CCATCTTTTATTTTTATGGA+CGG - chr1_2:68401621-68401640 Msa0087450:CDS 25.0%
! TTAACCATGCATTATCTTTA+TGG - chr1_2:68401684-68401703 Msa0087450:CDS 25.0%
!! AATGTTTTATCCATCTCTTT+AGG - chr1_2:68401943-68401962 Msa0087450:CDS 25.0%
! TTTACCAATAGATCATAGAA+GGG - chr1_2:68402701-68402720 Msa0087450:CDS 25.0%
! GTTAAGTTTAACATACTTTC+CGG - chr1_2:68402723-68402742 Msa0087450:CDS 25.0%
! GAAAAAACTACTAATTCTGA+AGG + chr1_2:68403029-68403048 None:intergenic 25.0%
! TGTAACAATGACATGATATT+TGG + chr1_2:68403198-68403217 None:intergenic 25.0%
! CTTGTAAAATTCAATGTATC+TGG + chr1_2:68403251-68403270 None:intergenic 25.0%
GGTTATAAAGTGAAATGGAT+AGG + chr1_2:68400516-68400535 None:intergenic 30.0%
! ATGCAACTCATCTTTTCAAT+GGG + chr1_2:68400604-68400623 None:intergenic 30.0%
! AATGCAACTCATCTTTTCAA+TGG + chr1_2:68400605-68400624 None:intergenic 30.0%
TAGATAAGACTATACTCAAG+AGG + chr1_2:68400642-68400661 None:intergenic 30.0%
!! AATTACAACACTGCTTTTCA+TGG - chr1_2:68400829-68400848 Msa0087450:CDS 30.0%
CATTGCAATAAGAAGATTGT+AGG - chr1_2:68401156-68401175 Msa0087450:CDS 30.0%
TGTTTAGTACAATTCCAGAT+TGG - chr1_2:68401531-68401550 Msa0087450:CDS 30.0%
!!! TTTTTAGTTTCTGCCTTGTA+TGG + chr1_2:68401592-68401611 None:intergenic 30.0%
CCGTCCATAAAAATAAAAGA+TGG + chr1_2:68401624-68401643 None:intergenic 30.0%
CATCCATTATCTTTATGTAC+AGG - chr1_2:68401826-68401845 Msa0087450:CDS 30.0%
AGCTACAGATAAACTATCAT+GGG + chr1_2:68401989-68402008 None:intergenic 30.0%
AAGCTACAGATAAACTATCA+TGG + chr1_2:68401990-68402009 None:intergenic 30.0%
AGTTTATCTGTAGCTTCATT+TGG - chr1_2:68401994-68402013 Msa0087450:CDS 30.0%
! AGAATTTTCTTCCATTTCCA+AGG + chr1_2:68402158-68402177 None:intergenic 30.0%
! AAGATTGTGATTTGTGATAG+AGG - chr1_2:68402321-68402340 Msa0087450:intron 30.0%
! GCTTTTCATAACACAAGATT+AGG - chr1_2:68402540-68402559 Msa0087450:intron 30.0%
! ATTTCAAGTGTGAGTAAACT+AGG + chr1_2:68402609-68402628 None:intergenic 30.0%
TGATCTATTGGTAAACTTGA+TGG + chr1_2:68402696-68402715 None:intergenic 30.0%
GTTTACCAATAGATCATAGA+AGG - chr1_2:68402700-68402719 Msa0087450:CDS 30.0%
TTAACCCTTCTATGATCTAT+TGG + chr1_2:68402708-68402727 None:intergenic 30.0%
! TTTTCAACACCTTATGATCA+TGG - chr1_2:68402903-68402922 Msa0087450:CDS 30.0%
!!! GAGCTTTTCTAGGATTAATA+TGG + chr1_2:68402935-68402954 None:intergenic 30.0%
TCGATATCATATACTAAACC+TGG + chr1_2:68402963-68402982 None:intergenic 30.0%
GTCATTGTTACACCATTTAA+AGG - chr1_2:68403206-68403225 Msa0087450:CDS 30.0%
GGCATATATGTTATCACAAT+CGG + chr1_2:68403383-68403402 None:intergenic 30.0%
TGAGAATCCATTAAAAGAGA+AGG - chr1_2:68403544-68403563 Msa0087450:five_prime_UTR 30.0%
! ACGGTTGATTCTTGTTGAAT+TGG + chr1_2:68400363-68400382 None:intergenic 35.0%
GCAATGGAAATAAAGGTGAA+CGG + chr1_2:68400382-68400401 None:intergenic 35.0%
ATCTTCCTTGCTTGTATACA+CGG - chr1_2:68400561-68400580 Msa0087450:three_prime_UTR 35.0%
! CTTTTGATGAATACCACTCT+GGG + chr1_2:68400741-68400760 None:intergenic 35.0%
! ACTTTTGATGAATACCACTC+TGG + chr1_2:68400742-68400761 None:intergenic 35.0%
! AAAAAGCTAGAATCTGAAGC+TGG - chr1_2:68400883-68400902 Msa0087450:CDS 35.0%
GTACTTTGTATCTGGGAATA+TGG + chr1_2:68400917-68400936 None:intergenic 35.0%
! GTAGTTGGTACTTTGTATCT+GGG + chr1_2:68400924-68400943 None:intergenic 35.0%
! TGTAGTTGGTACTTTGTATC+TGG + chr1_2:68400925-68400944 None:intergenic 35.0%
ACAAGAAGTCCATATTTCCT+TGG - chr1_2:68400949-68400968 Msa0087450:CDS 35.0%
! TTTGAATTGGTTCAAGACCA+AGG + chr1_2:68400969-68400988 None:intergenic 35.0%
!! CTTCTGTTGGTGTTTTGAAT+TGG + chr1_2:68400982-68401001 None:intergenic 35.0%
GCTAACCATGATGTTATAGT+TGG - chr1_2:68401018-68401037 Msa0087450:CDS 35.0%
AGACTCCAACTATAACATCA+TGG + chr1_2:68401026-68401045 None:intergenic 35.0%
AGTGAGAGTTTCATTGATAC+AGG - chr1_2:68401069-68401088 Msa0087450:CDS 35.0%
AAATCACCAAGAGATCAAGA+TGG - chr1_2:68401243-68401262 Msa0087450:CDS 35.0%
AATCTTCTTGGTTATGCCTA+TGG - chr1_2:68401318-68401337 Msa0087450:CDS 35.0%
!! CATAGTTTTACCACCATACA+AGG - chr1_2:68401576-68401595 Msa0087450:CDS 35.0%
CTGTCCATAAAGATAATGCA+TGG + chr1_2:68401691-68401710 None:intergenic 35.0%
GCACCTGTACATAAAGATAA+TGG + chr1_2:68401832-68401851 None:intergenic 35.0%
! GTTTTATCCATCTCTTTAGG+TGG - chr1_2:68401946-68401965 Msa0087450:CDS 35.0%
! TTCATTTGGAGCAATGGAAA+AGG - chr1_2:68402008-68402027 Msa0087450:CDS 35.0%
! TCATTTGGAGCAATGGAAAA+GGG - chr1_2:68402009-68402028 Msa0087450:CDS 35.0%
!! GTTTTTGTTTCATGTTCAGC+TGG - chr1_2:68402033-68402052 Msa0087450:CDS 35.0%
AAACATTTGTGAGACTGACA+GGG + chr1_2:68402074-68402093 None:intergenic 35.0%
GGAAATGGAAGAAAATTCTC+AGG - chr1_2:68402159-68402178 Msa0087450:CDS 35.0%
!! TCAGGAGCATCAATCTATAA+AGG - chr1_2:68402177-68402196 Msa0087450:CDS 35.0%
! TTGTTTTCTAACTGAGAGCA+CGG + chr1_2:68402208-68402227 None:intergenic 35.0%
AGTTAGAAAACAATACCCGT+TGG - chr1_2:68402215-68402234 Msa0087450:intron 35.0%
AAACACAAAGATCTTGGATC+AGG + chr1_2:68402267-68402286 None:intergenic 35.0%
TGATCCAAGATCTTTGTGTT+TGG - chr1_2:68402266-68402285 Msa0087450:intron 35.0%
! AATTAGTCCAAGAGTGCAAA+AGG - chr1_2:68402344-68402363 Msa0087450:intron 35.0%
! ATTAGTCCAAGAGTGCAAAA+GGG - chr1_2:68402345-68402364 Msa0087450:intron 35.0%
GATGAAAATGCTGCTACTAT+AGG + chr1_2:68402579-68402598 None:intergenic 35.0%
! TAGCAGCATTTTCATCAAGA+GGG - chr1_2:68402583-68402602 Msa0087450:intron 35.0%
!! GTGCTACTATATCAGGTTTT+AGG + chr1_2:68402632-68402651 None:intergenic 35.0%
TCAAAGCTAAACATCCTGAA+TGG - chr1_2:68402790-68402809 Msa0087450:CDS 35.0%
! ATTGCAGATTTTATAGCAGC+TGG + chr1_2:68402819-68402838 None:intergenic 35.0%
AGTATATGATATCGAACCTC+AGG - chr1_2:68402968-68402987 Msa0087450:CDS 35.0%
AGAAACTCAAAGTAATCCTG+AGG + chr1_2:68402987-68403006 None:intergenic 35.0%
ACATGATATTTGGAAACAGC+AGG + chr1_2:68403188-68403207 None:intergenic 35.0%
TTAACAACAGCGCCTTTAAA+TGG + chr1_2:68403221-68403240 None:intergenic 35.0%
TCAGTTTCAAAGTGACATCT+AGG - chr1_2:68403297-68403316 Msa0087450:CDS 35.0%
! TGCTGAATAGTAACTAGTCT+TGG + chr1_2:68403434-68403453 None:intergenic 35.0%
AAATGCTTCTCACACTATTG+TGG + chr1_2:68403673-68403692 None:intergenic 35.0%
CAGCAGTGCAATGGAAATAA+AGG + chr1_2:68400389-68400408 None:intergenic 40.0%
! CTTTATTTCCATTGCACTGC+TGG - chr1_2:68400387-68400406 Msa0087450:three_prime_UTR 40.0%
GTGTATACAAGCAAGGAAGA+TGG + chr1_2:68400562-68400581 None:intergenic 40.0%
!! CAACACTGCTTTTCATGGAA+TGG - chr1_2:68400834-68400853 Msa0087450:CDS 40.0%
! GACTTCTTGTTGTGTGTAGT+TGG + chr1_2:68400939-68400958 None:intergenic 40.0%
GGTTCAAGACCAAGGAAATA+TGG + chr1_2:68400961-68400980 None:intergenic 40.0%
TTCAAAACACCAACAGAAGC+TGG - chr1_2:68400983-68401002 Msa0087450:CDS 40.0%
! TTTTTCTGACCAGCTTCTGT+TGG + chr1_2:68400995-68401014 None:intergenic 40.0%
ATAGTTGGAGTCTTAGACAC+TGG - chr1_2:68401033-68401052 Msa0087450:CDS 40.0%
GAGTCTTAGACACTGGTATT+TGG - chr1_2:68401040-68401059 Msa0087450:CDS 40.0%
TCAATGAAACTCTCACTCTC+AGG + chr1_2:68401066-68401085 None:intergenic 40.0%
GGTGCAAGAATATTCTACCA+TGG - chr1_2:68401177-68401196 Msa0087450:CDS 40.0%
AGAAGATTAGCACCATGAAC+CGG + chr1_2:68401306-68401325 None:intergenic 40.0%
! GTTCATGGTGCTAATCTTCT+TGG - chr1_2:68401306-68401325 Msa0087450:CDS 40.0%
ACATATCTTCCAGCTTGCAT+GGG + chr1_2:68401514-68401533 None:intergenic 40.0%
AACATATCTTCCAGCTTGCA+TGG + chr1_2:68401515-68401534 None:intergenic 40.0%
TTAGTTTCTGCCTTGTATGG+TGG + chr1_2:68401589-68401608 None:intergenic 40.0%
TTGCAGCTTACAAAGTGTGT+TGG - chr1_2:68401857-68401876 Msa0087450:CDS 40.0%
TTATCCATCTCTTTAGGTGG+TGG - chr1_2:68401949-68401968 Msa0087450:CDS 40.0%
! TGTAGCTTCATTTGGAGCAA+TGG - chr1_2:68402002-68402021 Msa0087450:CDS 40.0%
TCATGTTCAGCTGGAAATTC+AGG - chr1_2:68402042-68402061 Msa0087450:CDS 40.0%
GAAACATTTGTGAGACTGAC+AGG + chr1_2:68402075-68402094 None:intergenic 40.0%
GTCTCACAAATGTTTCACCA+TGG - chr1_2:68402079-68402098 Msa0087450:CDS 40.0%
!! ACAATACCCGTTGGTTTACA+TGG - chr1_2:68402224-68402243 Msa0087450:intron 40.0%
!! CAATACCCGTTGGTTTACAT+GGG - chr1_2:68402225-68402244 Msa0087450:intron 40.0%
TTGCTTCCCATGTAAACCAA+CGG + chr1_2:68402234-68402253 None:intergenic 40.0%
CCTTCCAAACACAAAGATCT+TGG + chr1_2:68402273-68402292 None:intergenic 40.0%
CCAAGATCTTTGTGTTTGGA+AGG - chr1_2:68402270-68402289 Msa0087450:intron 40.0%
!! TTTGTGTTTGGAAGGCACTT+TGG - chr1_2:68402278-68402297 Msa0087450:intron 40.0%
AATGCTGCTACTATAGGAGA+TGG + chr1_2:68402573-68402592 None:intergenic 40.0%
! GTAGCAGCATTTTCATCAAG+AGG - chr1_2:68402582-68402601 Msa0087450:intron 40.0%
AAACCTGATATAGTAGCACC+TGG - chr1_2:68402633-68402652 Msa0087450:intron 40.0%
AGGACATGACATTGAAGTTC+CGG + chr1_2:68402745-68402764 None:intergenic 40.0%
ATGTCATGTCCTCATGTAAG+TGG - chr1_2:68402753-68402772 Msa0087450:CDS 40.0%
GGAAACACAACTGATATAGC+AGG + chr1_2:68403110-68403129 None:intergenic 40.0%
!!! GCAAAATTGGTTGGTTTTGC+TGG + chr1_2:68403131-68403150 None:intergenic 40.0%
ATCGTCGAAGCAAAATTGGT+TGG + chr1_2:68403140-68403159 None:intergenic 40.0%
GTGAATCGTCGAAGCAAAAT+TGG + chr1_2:68403144-68403163 None:intergenic 40.0%
AGGCAAAGTGAACCAGAATT+TGG - chr1_2:68403317-68403336 Msa0087450:CDS 40.0%
CAAAGTGAACCAGAATTTGG+AGG - chr1_2:68403320-68403339 Msa0087450:CDS 40.0%
TGAACCAGAATTTGGAGGTT+TGG - chr1_2:68403325-68403344 Msa0087450:CDS 40.0%
!! AGGTTTGGTGTGGAAAGATA+GGG - chr1_2:68403340-68403359 Msa0087450:CDS 40.0%
!! TAACTAGTCTTGGACTCCTA+GGG + chr1_2:68403424-68403443 None:intergenic 40.0%
CTTAGCCGTGTATACAAGCA+AGG + chr1_2:68400569-68400588 None:intergenic 45.0%
TGAAACCAGTACCTTCTCAC+TGG - chr1_2:68401094-68401113 Msa0087450:CDS 45.0%
! TGGAAAGGTGCATGTGAAAC+TGG - chr1_2:68401114-68401133 Msa0087450:CDS 45.0%
! CTGTTGCTGCTTCATATCCA+TGG + chr1_2:68401197-68401216 None:intergenic 45.0%
CATGGATATGAAGCAGCAAC+AGG - chr1_2:68401195-68401214 Msa0087450:CDS 45.0%
CCATGACCATCTTGATCTCT+TGG + chr1_2:68401252-68401271 None:intergenic 45.0%
CCAAGAGATCAAGATGGTCA+TGG - chr1_2:68401249-68401268 Msa0087450:CDS 45.0%
TATGCCTATGGAACAGCAAG+AGG - chr1_2:68401330-68401349 Msa0087450:CDS 45.0%
!! CATTCCTCTTGCTGTTCCAT+AGG + chr1_2:68401337-68401356 None:intergenic 45.0%
CTATGGAACAGCAAGAGGAA+TGG - chr1_2:68401335-68401354 Msa0087450:CDS 45.0%
CTCTAATTTCCCATGCAAGC+TGG - chr1_2:68401502-68401521 Msa0087450:CDS 45.0%
GCTTACAAAGTGTGTTGGAC+TGG - chr1_2:68401862-68401881 Msa0087450:CDS 45.0%
! TACAAAGTGTGTTGGACTGG+TGG - chr1_2:68401865-68401884 Msa0087450:CDS 45.0%
GTTGATACAGCTGTAGCTGA+TGG - chr1_2:68401916-68401935 Msa0087450:CDS 45.0%
TGTTTCACCATGGATCACCA+CGG - chr1_2:68402089-68402108 Msa0087450:CDS 45.0%
! TTTCCTGCAGATGTTAGCCT+TGG - chr1_2:68402138-68402157 Msa0087450:CDS 45.0%
TTTCCAAGGCTAACATCTGC+AGG + chr1_2:68402144-68402163 None:intergenic 45.0%
!! GCAGATGTTAGCCTTGGAAA+TGG - chr1_2:68402144-68402163 Msa0087450:CDS 45.0%
TGCTTCCCATGTAAACCAAC+GGG + chr1_2:68402233-68402252 None:intergenic 45.0%
! CTCCTGCATTTTTCACTACC+TGG + chr1_2:68402371-68402390 None:intergenic 45.0%
CAGGTAGTGAAAAATGCAGG+AGG - chr1_2:68402369-68402388 Msa0087450:intron 45.0%
! GTGAAAAATGCAGGAGGTGT+AGG - chr1_2:68402375-68402394 Msa0087450:intron 45.0%
CTCACAAACACTGCAGCAAA+TGG - chr1_2:68402405-68402424 Msa0087450:intron 45.0%
! TTTTCTCCTACTGCTACTGC+TGG + chr1_2:68402462-68402481 None:intergenic 45.0%
AGCAGTAGCAGTAGGAGAAA+AGG - chr1_2:68402461-68402480 Msa0087450:intron 45.0%
GTAGCAGTAGGAGAAAAGGA+AGG - chr1_2:68402465-68402484 Msa0087450:intron 45.0%
!! ACACCAGGTGCTACTATATC+AGG + chr1_2:68402639-68402658 None:intergenic 45.0%
GTGTGAACATTCTTGCTGCT+TGG - chr1_2:68402655-68402674 Msa0087450:intron 45.0%
! AACATTCTTGCTGCTTGGAG+TGG - chr1_2:68402660-68402679 Msa0087450:intron 45.0%
TCCTCATGTAAGTGGAATCG+CGG - chr1_2:68402761-68402780 Msa0087450:CDS 45.0%
!! GCAGAAGAAGCATCTCTAAG+AGG + chr1_2:68402879-68402898 None:intergenic 45.0%
ACACCTTATGATCATGGTGC+TGG - chr1_2:68402909-68402928 Msa0087450:CDS 45.0%
! CCTGGATCAAGAGCTTTTCT+AGG + chr1_2:68402945-68402964 None:intergenic 45.0%
CCTAGAAAAGCTCTTGATCC+AGG - chr1_2:68402942-68402961 Msa0087450:CDS 45.0%
! GACCAACATTGGTAACAGTG+CGG + chr1_2:68403166-68403185 None:intergenic 45.0%
CACACCAAACCTCCAAATTC+TGG + chr1_2:68403332-68403351 None:intergenic 45.0%
!! CAGAATTTGGAGGTTTGGTG+TGG - chr1_2:68403330-68403349 Msa0087450:CDS 45.0%
!! GAGGTTTGGTGTGGAAAGAT+AGG - chr1_2:68403339-68403358 Msa0087450:CDS 45.0%
CTAGGGGAAGAACTTCACAT+TGG + chr1_2:68403407-68403426 None:intergenic 45.0%
CAATGTGAAGTTCTTCCCCT+AGG - chr1_2:68403405-68403424 Msa0087450:CDS 45.0%
!! AACTAGTCTTGGACTCCTAG+GGG + chr1_2:68403423-68403442 None:intergenic 45.0%
!! GTAACTAGTCTTGGACTCCT+AGG + chr1_2:68403425-68403444 None:intergenic 45.0%
TTAGTGTGCCAGCAGTGCAA+TGG + chr1_2:68400398-68400417 None:intergenic 50.0%
GGGTGACTGGAAAAGATGTC+TGG + chr1_2:68400721-68400740 None:intergenic 50.0%
! TCTTTTCCAGTCACCCAGAG+TGG - chr1_2:68400725-68400744 Msa0087450:CDS 50.0%
TGAATACCACTCTGGGTGAC+TGG + chr1_2:68400734-68400753 None:intergenic 50.0%
! CCTTTCCAGTGAGAAGGTAC+TGG + chr1_2:68401102-68401121 None:intergenic 50.0%
CCAGTACCTTCTCACTGGAA+AGG - chr1_2:68401099-68401118 Msa0087450:CDS 50.0%
CATGCACCTTTCCAGTGAGA+AGG + chr1_2:68401108-68401127 None:intergenic 50.0%
GGTGCATGTGAAACTGGTAG+AGG - chr1_2:68401120-68401139 Msa0087450:CDS 50.0%
GACTCCACCACCTAAAGAGA+TGG + chr1_2:68401956-68401975 None:intergenic 50.0%
TTTGTGAGACTGACAGGGTC+AGG + chr1_2:68402069-68402088 None:intergenic 50.0%
AGGCACTTTGGATCGTCGAA+CGG - chr1_2:68402290-68402309 Msa0087450:intron 50.0%
TTTGGATCGTCGAACGGTCA+CGG - chr1_2:68402296-68402315 Msa0087450:intron 50.0%
GGCCAGGTAGTGAAAAATGC+AGG - chr1_2:68402366-68402385 Msa0087450:intron 50.0%
CTACTGCTACTGCTGGAAGT+AGG + chr1_2:68402455-68402474 None:intergenic 50.0%
CTACTTCCAGCAGTAGCAGT+AGG - chr1_2:68402453-68402472 Msa0087450:intron 50.0%
GCAGCAAGAATGTTCACACC+AGG + chr1_2:68402654-68402673 None:intergenic 50.0%
ATAGCAGCTGGACTCCATTC+AGG + chr1_2:68402807-68402826 None:intergenic 50.0%
TGGCCAGCACCATGATCATA+AGG + chr1_2:68402915-68402934 None:intergenic 50.0%
CACCGCACTGTTACCAATGT+TGG - chr1_2:68403161-68403180 Msa0087450:CDS 50.0%
GGAAACAGCAGGACCAACAT+TGG + chr1_2:68403177-68403196 None:intergenic 50.0%
GGGGAAGAACTTCACATTGG+TGG + chr1_2:68403404-68403423 None:intergenic 50.0%
CACACTGCAGCTACTGTTGC+CGG - chr1_2:68401276-68401295 Msa0087450:CDS 55.0%
AGCTACTGTTGCCGGATCTC+CGG - chr1_2:68401284-68401303 Msa0087450:CDS 55.0%
AGCACCATGAACCGGAGATC+CGG + chr1_2:68401298-68401317 None:intergenic 55.0%
ACAGCAAGAGGAATGGCACC+AGG - chr1_2:68401342-68401361 Msa0087450:CDS 55.0%
TCACCATGGATCACCACGGT+TGG - chr1_2:68402093-68402112 Msa0087450:CDS 55.0%
CATTGTGCTAGCTCCAACCG+TGG + chr1_2:68402109-68402128 None:intergenic 55.0%
CACGGTTGGAGCTAGCACAA+TGG - chr1_2:68402107-68402126 Msa0087450:CDS 55.0%
TTGGATCGTCGAACGGTCAC+GGG - chr1_2:68402297-68402316 Msa0087450:intron 55.0%
! TCCAAGAGTGCAAAAGGGCC+AGG - chr1_2:68402350-68402369 Msa0087450:intron 55.0%
! ACCTGGCCCTTTTGCACTCT+TGG + chr1_2:68402354-68402373 None:intergenic 55.0%
! GCTGCTTGGAGTGGACTTAC+TGG - chr1_2:68402669-68402688 Msa0087450:intron 55.0%
GCCGCGATTCCACTTACATG+AGG + chr1_2:68402765-68402784 None:intergenic 55.0%
GTTGCCGGATCTCCGGTTCA+TGG - chr1_2:68401291-68401310 Msa0087450:CDS 60.0%
GCTCCAACCGTGGTGATCCA+TGG + chr1_2:68402099-68402118 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 68400323 68403732 68400323 ID=Msa0087450;Name=Msa0087450
chr1_2 mRNA 68400323 68403732 68400323 ID=Msa0087450-mRNA-1;Parent=Msa0087450;Name=Msa0087450-mRNA-1;_AED=0.01;_eAED=0.01;_QI=290|1|1|1|1|1|2|320|771
chr1_2 exon 68400323 68402207 68400323 ID=Msa0087450-mRNA-1:exon:23339;Parent=Msa0087450-mRNA-1
chr1_2 exon 68402692 68403732 68402692 ID=Msa0087450-mRNA-1:exon:23338;Parent=Msa0087450-mRNA-1
chr1_2 five_prime_UTR 68403443 68403732 68403443 ID=Msa0087450-mRNA-1:five_prime_utr;Parent=Msa0087450-mRNA-1
chr1_2 CDS 68402692 68403442 68402692 ID=Msa0087450-mRNA-1:cds;Parent=Msa0087450-mRNA-1
chr1_2 CDS 68400643 68402207 68400643 ID=Msa0087450-mRNA-1:cds;Parent=Msa0087450-mRNA-1
chr1_2 three_prime_UTR 68400323 68400642 68400323 ID=Msa0087450-mRNA-1:three_prime_utr;Parent=Msa0087450-mRNA-1
Gene Sequence

>Msa0087450

ATGAGTTGCATTCTAGCAACATGTTTCCTCTTGAGTATAGTCTTATCTACACATGCTGAATTTGTCAAAAAAACTTACATCATTCATATGGATCAATCAGCAAAACCAGACATCTTTTCCAGTCACCCAGAGTGGTATTCATCAAAAGTGAAATCAGTACTTTCTAAATCAGTAGAAGCTGAAATAGATAATAGTGAAGAAGAGAGAATCATTTACAATTACAACACTGCTTTTCATGGAATGGCTGCTAAATTAAGCACAGAAGAAGCAAAAAAGCTAGAATCTGAAGCTGGTGTTGTAGCCATATTCCCAGATACAAAGTACCAACTACACACAACAAGAAGTCCATATTTCCTTGGTCTTGAACCAATTCAAAACACCAACAGAAGCTGGTCAGAAAAACTAGCTAACCATGATGTTATAGTTGGAGTCTTAGACACTGGTATTTGGCCTGAGAGTGAGAGTTTCATTGATACAGGACTGAAACCAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGTAGAGGATTCAGAAAACATCATTGCAATAAGAAGATTGTAGGTGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGTAAGATTGATGAGCAAGAAGATTACAAATCACCAAGAGATCAAGATGGTCATGGAACTCACACTGCAGCTACTGTTGCCGGATCTCCGGTTCATGGTGCTAATCTTCTTGGTTATGCCTATGGAACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTACAAAGTGTGTTGGACTGGTGGATGTTTCAGCTCAGATATTCTATCAGCTGTTGATACAGCTGTAGCTGATGGAGTCAATGTTTTATCCATCTCTTTAGGTGGTGGAGTCTCATCTTACTCCCATGATAGTTTATCTGTAGCTTCATTTGGAGCAATGGAAAAGGGTGTTTTTGTTTCATGTTCAGCTGGAAATTCAGGACCTGACCCTGTCAGTCTCACAAATGTTTCACCATGGATCACCACGGTTGGAGCTAGCACAATGGATAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAATTCTCAGGAGCATCAATCTATAAAGGAAAATCCGTGCTCTCAGTTAGAAAACAATACCCGTTGGTTTACATGGGAAGCAACTCAAGCAGTCCTGATCCAAGATCTTTGTGTTTGGAAGGCACTTTGGATCGTCGAACGGTCACGGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCAAGAGTGCAAAAGGGCCAGGTAGTGAAAAATGCAGGAGGTGTAGGAATGATTCTCACAAACACTGCAGCAAATGGAGAAGAATTAGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAGTAGGAGAAAAGGAAGGCAAAGATATCAAACAATATGTGTTAACAACTAAAAAAGCTACAGCTACATTAGCTTTTCATAACACAAGATTAGGAATTAGACCATCTCCTATAGTAGCAGCATTTTCATCAAGAGGGCCTAGTTTACTCACACTTGAAATCCTAAAACCTGATATAGTAGCACCTGGTGTGAACATTCTTGCTGCTTGGAGTGGACTTACTGGTCCATCAAGTTTACCAATAGATCATAGAAGGGTTAAGTTTAACATACTTTCCGGAACTTCAATGTCATGTCCTCATGTAAGTGGAATCGCGGCTATGATCAAAGCTAAACATCCTGAATGGAGTCCAGCTGCTATAAAATCTGCAATCATGACAACAGCTTATGTTCATGATAATACTATCAAACCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACACCTTATGATCATGGTGCTGGCCATATTAATCCTAGAAAAGCTCTTGATCCAGGTTTAGTATATGATATCGAACCTCAGGATTACTTTGAGTTTCTTTGCTCAAAGAAACTAAGCCCTTCAGAATTAGTAGTTTTTTCTAAAAATTCAAACAGAAATTGCAAACACACTCTTGCTAGTGCTAGTGACTTGAACTATCCTGCTATATCAGTTGTGTTTCCAGCAAAACCAACCAATTTTGCTTCGACGATTCACCGCACTGTTACCAATGTTGGTCCTGCTGTTTCCAAATATCATGTCATTGTTACACCATTTAAAGGCGCTGTTGTTAAAGTTGAGCCAGATACATTGAATTTTACAAGAAAATATCAGAAACTATCTTACAAGATCAGTTTCAAAGTGACATCTAGGCAAAGTGAACCAGAATTTGGAGGTTTGGTGTGGAAAGATAGGGTGCATAAAGTAAGAAGTCCGATTGTGATAACATATATGCCACCAATGTGA
Protein sequence

>Msa0087450

MSCILATCFLLSIVLSTHAEFVKKTYIIHMDQSAKPDIFSSHPEWYSSKVKSVLSKSVEAEIDNSEEERIIYNYNTAFHGMAAKLSTEEAKKLESEAGVVAIFPDTKYQLHTTRSPYFLGLEPIQNTNRSWSEKLANHDVIVGVLDTGIWPESESFIDTGLKPVPSHWKGACETGRGFRKHHCNKKIVGARIFYHGYEAATGKIDEQEDYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDTAVADGVNVLSISLGGGVSSYSHDSLSVASFGAMEKGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKFSGASIYKGKSVLSVRKQYPLVYMGSNSSSPDPRSLCLEGTLDRRTVTGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAVGEKEGKDIKQYVLTTKKATATLAFHNTRLGIRPSPIVAAFSSRGPSLLTLEILKPDIVAPGVNILAAWSGLTGPSSLPIDHRRVKFNILSGTSMSCPHVSGIAAMIKAKHPEWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLVYDIEPQDYFEFLCSKKLSPSELVVFSKNSNRNCKHTLASASDLNYPAISVVFPAKPTNFASTIHRTVTNVGPAVSKYHVIVTPFKGAVVKVEPDTLNFTRKYQKLSYKISFKVTSRQSEPEFGGLVWKDRVHKVRSPIVITYMPPM*