Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314980 | sp|Q28EW0|TM87A_XENTR | 35.125 | 279 | 168 | 5 | 191 | 461 | 197 | 470 | 9.78e-47 | 173 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314980 | A0A072TM56 | 98.812 | 505 | 6 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1032 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0050790 | Msa1314980 | 0.803158 | 3.984595e-49 | -8.615850e-47 |
| Msa0054880 | Msa1314980 | 0.801169 | 1.022167e-48 | -8.615850e-47 |
| Msa0606100 | Msa1314980 | 0.807699 | 4.449939e-50 | -8.615850e-47 |
| Msa0711400 | Msa1314980 | 0.812606 | 3.895527e-51 | -8.615850e-47 |
| Msa0758030 | Msa1314980 | 0.805557 | 1.260189e-49 | -8.615850e-47 |
| Msa0773630 | Msa1314980 | 0.812004 | 5.271785e-51 | -8.615850e-47 |
| Msa0136650 | Msa1314980 | 0.809284 | 2.041506e-50 | -8.615850e-47 |
| Msa0140280 | Msa1314980 | 0.800074 | 1.709146e-48 | -8.615850e-47 |
| Msa1234710 | Msa1314980 | 0.800568 | 1.356230e-48 | -8.615850e-47 |
| Msa1234870 | Msa1314980 | 0.942064 | 1.391399e-101 | -8.615850e-47 |
| Msa1240770 | Msa1314980 | 0.818744 | 1.670634e-52 | -8.615850e-47 |
| Msa1268630 | Msa1314980 | 0.805548 | 1.265626e-49 | -8.615850e-47 |
| Msa1279150 | Msa1314980 | 0.865342 | 6.332698e-65 | -8.615850e-47 |
| Msa1314980 | Msa1315130 | 0.836506 | 8.991419e-57 | -8.615850e-47 |
| Msa1314980 | Msa1315160 | 0.823281 | 1.507542e-53 | -8.615850e-47 |
| Msa1314980 | Msa1393780 | 0.812308 | 4.525555e-51 | -8.615850e-47 |
| Msa1314980 | Msa1400010 | 0.804666 | 1.936150e-49 | -8.615850e-47 |
| Msa1314980 | Msa1445120 | 0.808090 | 3.674269e-50 | -8.615850e-47 |
| Msa0380620 | Msa1314980 | 0.810369 | 1.193102e-50 | -8.615850e-47 |
| Msa0390970 | Msa1314980 | 0.806312 | 8.745055e-50 | -8.615850e-47 |
| Msa0418010 | Msa1314980 | 0.828660 | 7.947152e-55 | -8.615850e-47 |
| Msa0426530 | Msa1314980 | 0.801085 | 1.063289e-48 | -8.615850e-47 |
| Msa0430260 | Msa1314980 | 0.806813 | 6.854588e-50 | -8.615850e-47 |
| Msa0472950 | Msa1314980 | 0.806377 | 8.471483e-50 | -8.615850e-47 |
| Msa0981320 | Msa1314980 | 0.803911 | 2.780289e-49 | -8.615850e-47 |
| Msa1003740 | Msa1314980 | 0.844761 | 6.189697e-59 | -8.615850e-47 |
| Msa1003800 | Msa1314980 | 0.836467 | 9.199563e-57 | -8.615850e-47 |
| Msa1003930 | Msa1314980 | 0.837345 | 5.491182e-57 | -8.615850e-47 |
| Msa1042160 | Msa1314980 | 0.824748 | 6.822828e-54 | -8.615850e-47 |
| Msa1042190 | Msa1314980 | 0.827298 | 1.690129e-54 | -8.615850e-47 |
| Msa0298500 | Msa1314980 | 0.815392 | 9.463429e-52 | -8.615850e-47 |
| Msa0301820 | Msa1314980 | 0.812793 | 3.545322e-51 | -8.615850e-47 |
| Msa1123200 | Msa1314980 | 0.806177 | 9.335734e-50 | -8.615850e-47 |
| Msa1123210 | Msa1314980 | 0.821908 | 3.144194e-53 | -8.615850e-47 |
| Msa1132530 | Msa1314980 | 0.803991 | 2.676209e-49 | -8.615850e-47 |
| Msa1147910 | Msa1314980 | 0.805761 | 1.141827e-49 | -8.615850e-47 |
| Msa1167470 | Msa1314980 | 0.827634 | 1.403725e-54 | -8.615850e-47 |
| Msa1174670 | Msa1314980 | 0.897282 | 1.634665e-76 | -8.615850e-47 |
| Msa1174840 | Msa1314980 | 0.812767 | 3.592910e-51 | -8.615850e-47 |
| Msa1186520 | Msa1314980 | 0.833354 | 5.597472e-56 | -8.615850e-47 |
| Msa1215870 | Msa1314980 | 0.810240 | 1.271509e-50 | -8.615850e-47 |
| Msa1223390 | Msa1314980 | 0.813478 | 2.508346e-51 | -8.615850e-47 |
| Msa0483910 | Msa1314980 | 0.835521 | 1.598635e-56 | -8.615850e-47 |
| Msa0500380 | Msa1314980 | 0.809816 | 1.569655e-50 | -8.615850e-47 |
| Msa0863620 | Msa1314980 | 0.806635 | 7.476147e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314980 | MtrunA17_Chr8g0344451 | 98.812 | 505 | 6 | 0 | 1 | 505 | 1 | 505 | 0.0 | 1032 |
| Msa1314980 | MtrunA17_Chr2g0278311 | 57.895 | 456 | 187 | 4 | 20 | 472 | 23 | 476 | 0.0 | 552 |
| Msa1314980 | MtrunA17_Chr5g0428321 | 49.237 | 524 | 238 | 8 | 7 | 505 | 21 | 541 | 4.65e-176 | 506 |
| Msa1314980 | MtrunA17_Chr8g0334581 | 44.024 | 502 | 229 | 8 | 19 | 505 | 27 | 491 | 4.31e-137 | 405 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1314980 | AT1G72480.1 | 70.325 | 492 | 141 | 2 | 19 | 505 | 18 | 509 | 0.0 | 724 |
| Msa1314980 | AT2G01070.1 | 52.823 | 496 | 213 | 5 | 14 | 505 | 18 | 496 | 0.0 | 532 |
| Msa1314980 | AT2G01070.2 | 55.656 | 442 | 181 | 3 | 14 | 451 | 18 | 448 | 7.40e-180 | 513 |
| Msa1314980 | AT1G61670.1 | 47.843 | 510 | 243 | 5 | 9 | 505 | 14 | 513 | 6.61e-162 | 469 |
| Msa1314980 | AT1G61670.2 | 47.843 | 510 | 243 | 5 | 9 | 505 | 14 | 513 | 6.61e-162 | 469 |
| Msa1314980 | AT1G10980.1 | 38.925 | 465 | 264 | 9 | 6 | 456 | 10 | 468 | 1.24e-104 | 323 |
Find 136 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTTCAATATGTTAGATTT+TGG | 0.195422 | 8_4:-14129254 | Msa1314980:CDS |
| CTTAAGGATTTGGTTGTAGA+AGG | 0.250919 | 8_4:-14129387 | Msa1314980:CDS |
| TAGACGTGTTCTTCATTCTT+TGG | 0.274888 | 8_4:-14128867 | Msa1314980:CDS |
| TGATCCAAGGCTTAAGGATT+TGG | 0.284489 | 8_4:-14129397 | Msa1314980:CDS |
| CTTGGATCATCCCAGCCTTT+TGG | 0.296514 | 8_4:-14128221 | Msa1314980:CDS |
| ATGTGTTGCTTGGGATCTTT+TGG | 0.297305 | 8_4:-14129278 | Msa1314980:CDS |
| ACATCCTTTGGTAAAATAGA+TGG | 0.314272 | 8_4:+14127684 | None:intergenic |
| TAGAAGGATGATGATAAAAT+TGG | 0.315716 | 8_4:-14128589 | Msa1314980:CDS |
| CGGTGCAATAAGTGATCTTT+CGG | 0.324651 | 8_4:-14128929 | Msa1314980:CDS |
| TGTGTGTCATCTGTGTTGTC+TGG | 0.328516 | 8_4:-14128176 | Msa1314980:CDS |
| TTTCCATTGTTTCCTTGTAC+TGG | 0.329963 | 8_4:+14127642 | None:intergenic |
| CCTGCAGTTACTTGTAAGAT+TGG | 0.333455 | 8_4:-14127418 | Msa1314980:three_prime_UTR |
| TGTCTGTTGCACTGGTGATC+TGG | 0.344568 | 8_4:-14129595 | Msa1314980:CDS |
| CCGTCCTTCTACAGTGAATT+CGG | 0.349432 | 8_4:-14129535 | Msa1314980:CDS |
| ACAACAAAAGCGTTGCCTTT+GGG | 0.350791 | 8_4:+14130602 | None:intergenic |
| TGCAACTTTGAATAAGCTTC+AGG | 0.353143 | 8_4:-14128827 | Msa1314980:intron |
| GACAACAAAAGCGTTGCCTT+TGG | 0.359766 | 8_4:+14130601 | None:intergenic |
| GATTCCTGTTTCGCTAAATT+CGG | 0.371232 | 8_4:+14129146 | None:intergenic |
| AGAGAAAGAGGTTTCATTGA+GGG | 0.381199 | 8_4:+14130547 | None:intergenic |
| AGGAATTGAAGGAGAGAAAG+AGG | 0.392808 | 8_4:+14130535 | None:intergenic |
| ACTGTATGGGCAGTTACCTT+TGG | 0.396776 | 8_4:-14129108 | Msa1314980:CDS |
| TCCTTTGCATATGTGTTGCT+TGG | 0.397047 | 8_4:-14129288 | Msa1314980:CDS |
| TCACTGTGATCCAAGGCTTA+AGG | 0.398022 | 8_4:-14129403 | Msa1314980:CDS |
| GGTGCAATAAGTGATCTTTC+GGG | 0.400446 | 8_4:-14128928 | Msa1314980:CDS |
| GAAACAGGAATCAGGCCAAC+TGG | 0.406851 | 8_4:-14129135 | Msa1314980:CDS |
| CAATTCCTGACTCTTTCATA+AGG | 0.416600 | 8_4:-14130520 | Msa1314980:intron |
| GGCCAACTGGGACAACTGTA+TGG | 0.419983 | 8_4:-14129122 | Msa1314980:CDS |
| CCTTTGCATATGTGTTGCTT+GGG | 0.421476 | 8_4:-14129287 | Msa1314980:CDS |
| ACAATTGGTGGTTCGGCCTA+TGG | 0.426657 | 8_4:-14129630 | Msa1314980:CDS |
| GACAGAACTTGCCAAAAGGC+TGG | 0.431101 | 8_4:+14128210 | None:intergenic |
| TTGATAATTCCTTGTTTCTA+CGG | 0.431625 | 8_4:+14129706 | None:intergenic |
| ATGCAATGTAACAGGCTAGA+AGG | 0.432134 | 8_4:-14128605 | Msa1314980:intron |
| CATATGCAAAGGACATGAAC+TGG | 0.433132 | 8_4:+14129298 | None:intergenic |
| TAGGAAGTTCACCAATGCTT+TGG | 0.435399 | 8_4:-14128559 | Msa1314980:CDS |
| GTGGAAGATAGAGAGACAAT+TGG | 0.436551 | 8_4:-14129645 | Msa1314980:CDS |
| CAGTCCGAATTCACTGTAGA+AGG | 0.442631 | 8_4:+14129531 | None:intergenic |
| TATTACCTTATGAAAGAGTC+AGG | 0.444051 | 8_4:+14130515 | None:intergenic |
| GTGTGTCATCTGTGTTGTCT+GGG | 0.457926 | 8_4:-14128175 | Msa1314980:CDS |
| ACAACCAAATCCTTAAGCCT+TGG | 0.460415 | 8_4:+14129393 | None:intergenic |
| TCCGGCACACTCACATCCTT+TGG | 0.461944 | 8_4:+14127672 | None:intergenic |
| TCCATGATAAAAGTATAGTT+CGG | 0.465015 | 8_4:-14127393 | Msa1314980:three_prime_UTR |
| GAAATACAAATTATACATTC+CGG | 0.466974 | 8_4:+14129428 | None:intergenic |
| GAGAGAGAAAGAGTGGGGTG+TGG | 0.468178 | 8_4:+14130722 | None:intergenic |
| ATGAGCAATGGCAAAATGCT+TGG | 0.468783 | 8_4:-14128239 | Msa1314980:CDS |
| TTTCATAGGTGCCATTCTAC+CGG | 0.470578 | 8_4:+14129329 | None:intergenic |
| TAGAGAGACAATTGGTGGTT+CGG | 0.471497 | 8_4:-14129637 | Msa1314980:CDS |
| TGATAAAATTGGATATGTAT+AGG | 0.472188 | 8_4:-14128578 | Msa1314980:CDS |
| TTATAGAGCTAATGACATAA+TGG | 0.477902 | 8_4:+14127554 | None:intergenic |
| AATTTAGCGAAACAGGAATC+AGG | 0.482089 | 8_4:-14129143 | Msa1314980:CDS |
| AGTTCGGTTTACTAATACAA+AGG | 0.483640 | 8_4:-14127377 | Msa1314980:three_prime_UTR |
| CAAAGGGCTGTCTGTTGCAC+TGG | 0.484472 | 8_4:-14129603 | Msa1314980:CDS |
| GCATAATCACCTTTGATGTA+AGG | 0.485506 | 8_4:+14129004 | None:intergenic |
| AATGAAGAACACGTCTAATA+CGG | 0.487209 | 8_4:+14128873 | None:intergenic |
| CCTTGTACTGGTCTAGCATC+CGG | 0.487817 | 8_4:+14127654 | None:intergenic |
| GAGAGAAAGAGGTTTCATTG+AGG | 0.491311 | 8_4:+14130546 | None:intergenic |
| TTTGGTTGTAGAAGGGAAAA+CGG | 0.491750 | 8_4:-14129379 | Msa1314980:CDS |
| TTAAGGATTTGGTTGTAGAA+GGG | 0.493677 | 8_4:-14129386 | Msa1314980:CDS |
| ACATCAAAGGTGATTATGCT+TGG | 0.495017 | 8_4:-14129000 | Msa1314980:CDS |
| CAACAAAAGCGTTGCCTTTG+GGG | 0.506916 | 8_4:+14130603 | None:intergenic |
| AAACTTGGTGTGTGCAATGA+AGG | 0.512261 | 8_4:-14129570 | Msa1314980:CDS |
| AACACGTCTAATACGGCAGC+AGG | 0.523540 | 8_4:+14128880 | None:intergenic |
| ACTGGTGATCTGGCAAAACT+TGG | 0.524523 | 8_4:-14129585 | Msa1314980:CDS |
| TCAAATACAACAGCTTGAAT+CGG | 0.526663 | 8_4:+14129669 | None:intergenic |
| AAATTCCTTCACTTCCTCCA+TGG | 0.529822 | 8_4:+14130579 | None:intergenic |
| TCAAGCTGTTGTATTTGAAG+TGG | 0.531264 | 8_4:-14129664 | Msa1314980:CDS |
| ATGAAAGAGTCAGGAATTGA+AGG | 0.531275 | 8_4:+14130524 | None:intergenic |
| TTAATCGTTTCAATGGGCTA+TGG | 0.532401 | 8_4:-14129051 | Msa1314980:CDS |
| GGTGTTGTGAGACCTACTCT+TGG | 0.533241 | 8_4:-14129030 | Msa1314980:CDS |
| TGGCTATCTACCCGGTAGAA+TGG | 0.533484 | 8_4:-14129340 | Msa1314980:CDS |
| GTTGTCCATGGAGGAAGTGA+AGG | 0.536293 | 8_4:-14130584 | Msa1314980:CDS |
| ACAGAACTTGCCAAAAGGCT+GGG | 0.536502 | 8_4:+14128211 | None:intergenic |
| CACAGCTACTGCCAAAGCAT+TGG | 0.539058 | 8_4:+14128548 | None:intergenic |
| AGTAGCTGTGGTTGTATCTG+TGG | 0.546402 | 8_4:-14128535 | Msa1314980:CDS |
| ATGGGAGCGAAGAGTTCGAT+AGG | 0.546538 | 8_4:-14127734 | Msa1314980:CDS |
| GTAAGACAGAACTTGCCAAA+AGG | 0.547149 | 8_4:+14128206 | None:intergenic |
| AAGAGTGGGGTGTGGATCTG+TGG | 0.547532 | 8_4:+14130730 | None:intergenic |
| ATTTCATTCACTGTGATCCA+AGG | 0.552944 | 8_4:-14129410 | Msa1314980:CDS |
| CGTTCTCTTGATAGTTCCAA+AGG | 0.554745 | 8_4:+14129092 | None:intergenic |
| GTGATCTGAATAGATTTGAT+CGG | 0.555253 | 8_4:+14129456 | None:intergenic |
| TCTTGGAGGCCTTACATCAA+AGG | 0.555675 | 8_4:-14129013 | Msa1314980:CDS |
| CAATGCTTTGGCAGTAGCTG+TGG | 0.556217 | 8_4:-14128547 | Msa1314980:CDS |
| AACACTCGGCATGTTTGAGA+TGG | 0.559304 | 8_4:-14129190 | Msa1314980:CDS |
| GTTCGGCCTATGGAGGTCAA+AGG | 0.561879 | 8_4:-14129620 | Msa1314980:CDS |
| TTCGGCCTATGGAGGTCAAA+GGG | 0.562746 | 8_4:-14129619 | Msa1314980:CDS |
| AGTGTTATGCAGTTCTGCAA+TGG | 0.563040 | 8_4:+14129219 | None:intergenic |
| CTGTGGTTGTATCTGTGGGA+TGG | 0.563356 | 8_4:-14128530 | Msa1314980:CDS |
| TCAAAGGTGATTATGCTTGG+TGG | 0.563894 | 8_4:-14128997 | Msa1314980:CDS |
| TTGTAGAAGGGAAAACGGTA+TGG | 0.564102 | 8_4:-14129374 | Msa1314980:CDS |
| GTAGCTGTGGTTGTATCTGT+GGG | 0.568371 | 8_4:-14128534 | Msa1314980:CDS |
| TTCATAGGTGCCATTCTACC+GGG | 0.571888 | 8_4:+14129330 | None:intergenic |
| TGCATCTGAAGTGCTTGAGT+TGG | 0.574697 | 8_4:-14128962 | Msa1314980:CDS |
| CTTTGGAACTATCAAGAGAA+CGG | 0.576048 | 8_4:-14129091 | Msa1314980:CDS |
| GATGTAAGGCCTCCAAGAGT+AGG | 0.579380 | 8_4:+14129018 | None:intergenic |
| GCCCATACAGTTGTCCCAGT+TGG | 0.582069 | 8_4:+14129120 | None:intergenic |
| ATGATATATACAATGAGCAA+TGG | 0.584957 | 8_4:-14128251 | Msa1314980:CDS |
| CCAATCTTACAAGTAACTGC+AGG | 0.585387 | 8_4:+14127418 | None:intergenic |
| ACGGTATGGAAGAATCCCTC+TGG | 0.586507 | 8_4:-14129360 | Msa1314980:CDS |
| GCCAACTGGGACAACTGTAT+GGG | 0.590383 | 8_4:-14129121 | Msa1314980:CDS |
| TGGTGTGTGCAATGAAGGAC+AGG | 0.592622 | 8_4:-14129565 | Msa1314980:CDS |
| GTTGTGAGACCTACTCTTGG+AGG | 0.595017 | 8_4:-14129027 | Msa1314980:CDS |
| CCGGATGCTAGACCAGTACA+AGG | 0.595061 | 8_4:-14127654 | Msa1314980:CDS |
| AGATATGCTTACCGTGACGA+TGG | 0.595374 | 8_4:-14127753 | Msa1314980:CDS |
| CTTCTACAGTGAATTCGGAC+TGG | 0.597379 | 8_4:-14129530 | Msa1314980:CDS |
| GATATGCTTACCGTGACGAT+GGG | 0.597669 | 8_4:-14127752 | Msa1314980:CDS |
| ACCAAAGGATGTGAGTGTGC+CGG | 0.598398 | 8_4:-14127673 | Msa1314980:CDS |
| AATAAGCTAGAATATAGCTA+TGG | 0.599904 | 8_4:-14127587 | Msa1314980:exon |
| AAACAGGAATCAGGCCAACT+GGG | 0.601977 | 8_4:-14129134 | Msa1314980:CDS |
| AGTCACATTCCGTAGAAACA+AGG | 0.604075 | 8_4:-14129715 | Msa1314980:CDS |
| AGAATTGTAAGAACTGTGAG+AGG | 0.606225 | 8_4:+14130689 | None:intergenic |
| ATTGGTGGTTCGGCCTATGG+AGG | 0.610044 | 8_4:-14129627 | Msa1314980:CDS |
| TGGGAGCGAAGAGTTCGATA+GGG | 0.610656 | 8_4:-14127733 | Msa1314980:CDS |
| CATGTATGCATGTATGCACA+TGG | 0.617426 | 8_4:+14127311 | None:intergenic |
| GAAGATAGAGAGACAATTGG+TGG | 0.619803 | 8_4:-14129642 | Msa1314980:CDS |
| AATTATCAAACTTTAGCTCG+TGG | 0.622921 | 8_4:-14129692 | Msa1314980:CDS |
| AGACCAGTACAAGGAAACAA+TGG | 0.626146 | 8_4:-14127645 | Msa1314980:CDS |
| AACGCGACGCCGAAAACTTG+AGG | 0.627067 | 8_4:+14129507 | None:intergenic |
| CCCAAGCAACACATATGCAA+AGG | 0.627872 | 8_4:+14129287 | None:intergenic |
| AATCCCTCTGGCTATCTACC+CGG | 0.632875 | 8_4:-14129348 | Msa1314980:CDS |
| AACAAAAGCGTTGCCTTTGG+GGG | 0.633130 | 8_4:+14130604 | None:intergenic |
| GAATTGTAAGAACTGTGAGA+GGG | 0.646971 | 8_4:+14130690 | None:intergenic |
| ACTCTTCGCTCCCATCGTCA+CGG | 0.648119 | 8_4:+14127742 | None:intergenic |
| AATTGTAAGAACTGTGAGAG+GGG | 0.650924 | 8_4:+14130691 | None:intergenic |
| CACCATCTCAAAATTCAACA+CGG | 0.653546 | 8_4:-14128152 | Msa1314980:intron |
| CTATCAAGAGAACGGTTGCG+AGG | 0.659792 | 8_4:-14129083 | Msa1314980:CDS |
| CCGAATTCACTGTAGAAGGA+CGG | 0.663014 | 8_4:+14129535 | None:intergenic |
| GACAGCCCTTTGACCTCCAT+AGG | 0.665364 | 8_4:+14129614 | None:intergenic |
| TGTGGGATGGATATGCTATG+AGG | 0.666058 | 8_4:-14128517 | Msa1314980:intron |
| TATGCATGTATGCACATGGA+TGG | 0.666101 | 8_4:+14127315 | None:intergenic |
| GTGCATACATGCATACATGT+GGG | 0.666481 | 8_4:-14127307 | Msa1314980:three_prime_UTR |
| TGCATACATGCATACATGTG+GGG | 0.670822 | 8_4:-14127306 | Msa1314980:three_prime_UTR |
| TGTGCATACATGCATACATG+TGG | 0.675610 | 8_4:-14127308 | Msa1314980:three_prime_UTR |
| CTTGAGTTGGTAGAACATGT+CGG | 0.689634 | 8_4:-14128949 | Msa1314980:CDS |
| ATAACACTAGTGATAACACT+CGG | 0.692289 | 8_4:-14129204 | Msa1314980:CDS |
| CTACCGGGTAGATAGCCAGA+GGG | 0.707493 | 8_4:+14129345 | None:intergenic |
| TCTACCGGGTAGATAGCCAG+AGG | 0.717930 | 8_4:+14129344 | None:intergenic |
| GCATACATGCATACATGTGG+GGG | 0.727243 | 8_4:-14127305 | Msa1314980:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAATTGTCTATAAAAAAT+AGG | - | chr8_4:14130249-14130268 | Msa1314980:intron | 10.0% |
| !! | TAAATTGTCTATAAAAAATA+GGG | - | chr8_4:14130250-14130269 | Msa1314980:intron | 10.0% |
| !! | TATACTATGAACAAATTAAA+AGG | - | chr8_4:14129739-14129758 | Msa1314980:intron | 15.0% |
| !!! | TAAGCTATTTCTATAACAAA+AGG | - | chr8_4:14128123-14128142 | Msa1314980:intron | 20.0% |
| !!! | AAATTATGTTGATTGGATTT+TGG | - | chr8_4:14128359-14128378 | Msa1314980:intron | 20.0% |
| !! | GAAATACAAATTATACATTC+CGG | + | chr8_4:14128701-14128720 | None:intergenic | 20.0% |
| !!! | TCTTTCAATATGTTAGATTT+TGG | - | chr8_4:14128872-14128891 | Msa1314980:CDS | 20.0% |
| !!! | ATCATTTTAATCGTTTCAAT+GGG | - | chr8_4:14129069-14129088 | Msa1314980:CDS | 20.0% |
| !! | TGATAAAATTGGATATGTAT+AGG | - | chr8_4:14129548-14129567 | Msa1314980:CDS | 20.0% |
| !!! | AATAAGTTGAAAACAACTTA+TGG | + | chr8_4:14130107-14130126 | None:intergenic | 20.0% |
| !! | ATTAAGTGTCTATCATATAT+GGG | + | chr8_4:14130230-14130249 | None:intergenic | 20.0% |
| !! | AATTAAGTGTCTATCATATA+TGG | + | chr8_4:14130231-14130250 | None:intergenic | 20.0% |
| !! | TTTTAACAGTGAGGTTATAT+GGG | + | chr8_4:14127321-14127340 | None:intergenic | 25.0% |
| ! | TAATAATTCACATTCCTTTC+TGG | - | chr8_4:14127629-14127648 | Msa1314980:CDS | 25.0% |
| ! | AATAATTCACATTCCTTTCT+GGG | - | chr8_4:14127630-14127649 | Msa1314980:CDS | 25.0% |
| ! | CTGAATACTAAAATGTGAAA+AGG | + | chr8_4:14127683-14127702 | None:intergenic | 25.0% |
| !!! | AAATGATTTTTTGAACCTGT+CGG | - | chr8_4:14127775-14127794 | Msa1314980:intron | 25.0% |
| ! | TAAGCTGTTAAAATCAAACA+AGG | + | chr8_4:14127837-14127856 | None:intergenic | 25.0% |
| ! | GTTATGGAAATTATGTTGAT+TGG | - | chr8_4:14128352-14128371 | Msa1314980:intron | 25.0% |
| !!! | TTGATAATTCCTTGTTTCTA+CGG | + | chr8_4:14128423-14128442 | None:intergenic | 25.0% |
| !! | AACTGGAAGAAAATTTTCAT+AGG | + | chr8_4:14128814-14128833 | None:intergenic | 25.0% |
| !! | TCAATATGTTAGATTTTGGA+AGG | - | chr8_4:14128876-14128895 | Msa1314980:CDS | 25.0% |
| !!! | GATCATTTTAATCGTTTCAA+TGG | - | chr8_4:14129068-14129087 | Msa1314980:CDS | 25.0% |
| !! | TTGTACATAAAAGCATATCA+TGG | + | chr8_4:14129374-14129393 | None:intergenic | 25.0% |
| ! | TAGAAGGATGATGATAAAAT+TGG | - | chr8_4:14129537-14129556 | Msa1314980:CDS | 25.0% |
| ! | ATGATATATACAATGAGCAA+TGG | - | chr8_4:14129875-14129894 | Msa1314980:intron | 25.0% |
| ! | AAGCTATTCAAAATAGCTTA+TGG | + | chr8_4:14130131-14130150 | None:intergenic | 25.0% |
| ! | TCAAAACCAGAAATAAAGAA+CGG | + | chr8_4:14130352-14130371 | None:intergenic | 25.0% |
| !! | AAAACCATCTATTTTACCAA+AGG | - | chr8_4:14130438-14130457 | Msa1314980:intron | 25.0% |
| ! | AATAAGCTAGAATATAGCTA+TGG | - | chr8_4:14130539-14130558 | Msa1314980:CDS | 25.0% |
| ! | TTATAGAGCTAATGACATAA+TGG | + | chr8_4:14130575-14130594 | None:intergenic | 25.0% |
| !! | TCCATGATAAAAGTATAGTT+CGG | - | chr8_4:14130733-14130752 | Msa1314980:five_prime_UTR | 25.0% |
| !! | GTTTTAACAGTGAGGTTATA+TGG | + | chr8_4:14127322-14127341 | None:intergenic | 30.0% |
| !!! | TGTTTAGTGTTTTAACAGTG+AGG | + | chr8_4:14127330-14127349 | None:intergenic | 30.0% |
| !! | ATTTTAGAGAGAGAAAGAGT+GGG | + | chr8_4:14127413-14127432 | None:intergenic | 30.0% |
| TATTACCTTATGAAAGAGTC+AGG | + | chr8_4:14127614-14127633 | None:intergenic | 30.0% | |
| !! | GTTGTTTTCATAAGCTAACA+TGG | - | chr8_4:14127930-14127949 | Msa1314980:intron | 30.0% |
| AGCTCAAATAAGCCTATTTA+AGG | - | chr8_4:14128031-14128050 | Msa1314980:intron | 30.0% | |
| TAAGTAATTCTCATGCTAAG+TGG | - | chr8_4:14128093-14128112 | Msa1314980:intron | 30.0% | |
| TCAGTAGTTAAGCTCAAATA+TGG | - | chr8_4:14128296-14128315 | Msa1314980:intron | 30.0% | |
| TCAAATATGGCAATACAAAC+AGG | - | chr8_4:14128309-14128328 | Msa1314980:intron | 30.0% | |
| AACAAAGTAAGCGCTATTTA+GGG | + | chr8_4:14128335-14128354 | None:intergenic | 30.0% | |
| TAACAAAGTAAGCGCTATTT+AGG | + | chr8_4:14128336-14128355 | None:intergenic | 30.0% | |
| AAATAGCGCTTACTTTGTTA+TGG | - | chr8_4:14128336-14128355 | Msa1314980:intron | 30.0% | |
| ! | AATTATCAAACTTTAGCTCG+TGG | - | chr8_4:14128434-14128453 | Msa1314980:intron | 30.0% |
| TCAAATACAACAGCTTGAAT+CGG | + | chr8_4:14128460-14128479 | None:intergenic | 30.0% | |
| GTGATCTGAATAGATTTGAT+CGG | + | chr8_4:14128673-14128692 | None:intergenic | 30.0% | |
| TCTATTCAGATCACAAAAAC+CGG | - | chr8_4:14128679-14128698 | Msa1314980:intron | 30.0% | |
| ! | TTAAGGATTTGGTTGTAGAA+GGG | - | chr8_4:14128740-14128759 | Msa1314980:intron | 30.0% |
| ATAACACTAGTGATAACACT+CGG | - | chr8_4:14128922-14128941 | Msa1314980:CDS | 30.0% | |
| AATGAAGAACACGTCTAATA+CGG | + | chr8_4:14129256-14129275 | None:intergenic | 30.0% | |
| AATTACGTTCTATGCTAACT+AGG | - | chr8_4:14129663-14129682 | Msa1314980:CDS | 30.0% | |
| AACATTTCTTGATCTAGTCT+AGG | + | chr8_4:14129773-14129792 | None:intergenic | 30.0% | |
| ATATGAACATAGAGCATAGA+TGG | + | chr8_4:14130303-14130322 | None:intergenic | 30.0% | |
| TTAACAGTGAGATATAAGTG+AGG | + | chr8_4:14130327-14130346 | None:intergenic | 30.0% | |
| ! | TTAATGCCGTTCTTTATTTC+TGG | - | chr8_4:14130343-14130362 | Msa1314980:intron | 30.0% |
| ACATCCTTTGGTAAAATAGA+TGG | + | chr8_4:14130445-14130464 | None:intergenic | 30.0% | |
| ! | ACCGAACTATACTTTTATCA+TGG | + | chr8_4:14130737-14130756 | None:intergenic | 30.0% |
| AGTTCGGTTTACTAATACAA+AGG | - | chr8_4:14130749-14130768 | Msa1314980:five_prime_UTR | 30.0% | |
| !! | TTTTAGAGAGAGAAAGAGTG+GGG | + | chr8_4:14127412-14127431 | None:intergenic | 35.0% |
| !! | CATTTTAGAGAGAGAAAGAG+TGG | + | chr8_4:14127414-14127433 | None:intergenic | 35.0% |
| AATTGTAAGAACTGTGAGAG+GGG | + | chr8_4:14127438-14127457 | None:intergenic | 35.0% | |
| GAATTGTAAGAACTGTGAGA+GGG | + | chr8_4:14127439-14127458 | None:intergenic | 35.0% | |
| AGAATTGTAAGAACTGTGAG+AGG | + | chr8_4:14127440-14127459 | None:intergenic | 35.0% | |
| !! | AAGTTTCGCTTTTGTAGTCA+TGG | + | chr8_4:14127499-14127518 | None:intergenic | 35.0% |
| AGAGAAAGAGGTTTCATTGA+GGG | + | chr8_4:14127582-14127601 | None:intergenic | 35.0% | |
| ATGAAAGAGTCAGGAATTGA+AGG | + | chr8_4:14127605-14127624 | None:intergenic | 35.0% | |
| CAATTCCTGACTCTTTCATA+AGG | - | chr8_4:14127606-14127625 | Msa1314980:CDS | 35.0% | |
| AAAAGAGAAGAAACCCAGAA+AGG | + | chr8_4:14127646-14127665 | None:intergenic | 35.0% | |
| TGGTACAAAAAATGATAGCC+TGG | - | chr8_4:14127798-14127817 | Msa1314980:intron | 35.0% | |
| TAATCTCTTCCAAACAGTCT+TGG | - | chr8_4:14127987-14128006 | Msa1314980:intron | 35.0% | |
| ATCCAAACAGAGCCTTAAAT+AGG | + | chr8_4:14128046-14128065 | None:intergenic | 35.0% | |
| AAGCATTTGTGACACTGTTT+GGG | + | chr8_4:14128273-14128292 | None:intergenic | 35.0% | |
| TAAGCATTTGTGACACTGTT+TGG | + | chr8_4:14128274-14128293 | None:intergenic | 35.0% | |
| GAATGTGACTTTATCAAACC+TGG | + | chr8_4:14128401-14128420 | None:intergenic | 35.0% | |
| TCAAGCTGTTGTATTTGAAG+TGG | - | chr8_4:14128462-14128481 | Msa1314980:intron | 35.0% | |
| ATTTCATTCACTGTGATCCA+AGG | - | chr8_4:14128716-14128735 | Msa1314980:intron | 35.0% | |
| ! | CTTAAGGATTTGGTTGTAGA+AGG | - | chr8_4:14128739-14128758 | Msa1314980:intron | 35.0% |
| TTTGGTTGTAGAAGGGAAAA+CGG | - | chr8_4:14128747-14128766 | Msa1314980:intron | 35.0% | |
| GATTCCTGTTTCGCTAAATT+CGG | + | chr8_4:14128983-14129002 | None:intergenic | 35.0% | |
| AATTTAGCGAAACAGGAATC+AGG | - | chr8_4:14128983-14129002 | Msa1314980:CDS | 35.0% | |
| !! | CTTTGGAACTATCAAGAGAA+CGG | - | chr8_4:14129035-14129054 | Msa1314980:CDS | 35.0% |
| !! | TTAATCGTTTCAATGGGCTA+TGG | - | chr8_4:14129075-14129094 | Msa1314980:CDS | 35.0% |
| GCATAATCACCTTTGATGTA+AGG | + | chr8_4:14129125-14129144 | None:intergenic | 35.0% | |
| ACATCAAAGGTGATTATGCT+TGG | - | chr8_4:14129126-14129145 | Msa1314980:CDS | 35.0% | |
| CACTTCAGATGCAACAAAAA+AGG | + | chr8_4:14129157-14129176 | None:intergenic | 35.0% | |
| ! | GGGAAAAGCAAAACTTTTCT+TGG | - | chr8_4:14129218-14129237 | Msa1314980:CDS | 35.0% |
| TAGACGTGTTCTTCATTCTT+TGG | - | chr8_4:14129259-14129278 | Msa1314980:CDS | 35.0% | |
| TGCAACTTTGAATAAGCTTC+AGG | - | chr8_4:14129299-14129318 | Msa1314980:CDS | 35.0% | |
| GAATGACTCAATTCACTTTG+TGG | - | chr8_4:14129450-14129469 | Msa1314980:CDS | 35.0% | |
| GATAGTTGAATCAAGCTCAT+TGG | - | chr8_4:14129695-14129714 | Msa1314980:CDS | 35.0% | |
| AACTTATCGAAAGTCTACTG+CGG | + | chr8_4:14129799-14129818 | None:intergenic | 35.0% | |
| CAGCTGAAAGAAAATCAGAA+AGG | + | chr8_4:14129842-14129861 | None:intergenic | 35.0% | |
| CACCATCTCAAAATTCAACA+CGG | - | chr8_4:14129974-14129993 | Msa1314980:intron | 35.0% | |
| !! | TACCGTGTTGAATTTTGAGA+TGG | + | chr8_4:14129979-14129998 | None:intergenic | 35.0% |
| TAGATAACAAAAGGACTTGG+AGG | + | chr8_4:14130011-14130030 | None:intergenic | 35.0% | |
| !! | TCCAAGTCCTTTTGTTATCT+AGG | - | chr8_4:14130010-14130029 | Msa1314980:intron | 35.0% |
| ACCTAGATAACAAAAGGACT+TGG | + | chr8_4:14130014-14130033 | None:intergenic | 35.0% | |
| ACTTATTTGAGCTTATCCAC+TGG | - | chr8_4:14130047-14130066 | Msa1314980:intron | 35.0% | |
| TTTCCATTGTTTCCTTGTAC+TGG | + | chr8_4:14130487-14130506 | None:intergenic | 35.0% | |
| !! | TTCGCTTTTGTAGTCATGGA+CGG | + | chr8_4:14127495-14127514 | None:intergenic | 40.0% |
| !! | ACAACAAAAGCGTTGCCTTT+GGG | + | chr8_4:14127527-14127546 | None:intergenic | 40.0% |
| AAATTCCTTCACTTCCTCCA+TGG | + | chr8_4:14127550-14127569 | None:intergenic | 40.0% | |
| GAGAGAAAGAGGTTTCATTG+AGG | + | chr8_4:14127583-14127602 | None:intergenic | 40.0% | |
| AGGAATTGAAGGAGAGAAAG+AGG | + | chr8_4:14127594-14127613 | None:intergenic | 40.0% | |
| !!! | TGATTTTTTGAACCTGTCGG+TGG | - | chr8_4:14127778-14127797 | Msa1314980:intron | 40.0% |
| !!! | TCATTTTTTGTACCACCGAC+AGG | + | chr8_4:14127793-14127812 | None:intergenic | 40.0% |
| CAAGGTCTAGAAACTAAACC+AGG | + | chr8_4:14127819-14127838 | None:intergenic | 40.0% | |
| TACACACTTCCAAGACTGTT+TGG | + | chr8_4:14127999-14128018 | None:intergenic | 40.0% | |
| ! | AGCCTATTTAAGGCTCTGTT+TGG | - | chr8_4:14128041-14128060 | Msa1314980:intron | 40.0% |
| CTTATTTCCATAAGCTCTCC+TGG | + | chr8_4:14128204-14128223 | None:intergenic | 40.0% | |
| ! | GGTGTTGTAATGTGAAAACC+AGG | - | chr8_4:14128380-14128399 | Msa1314980:intron | 40.0% |
| AGTCACATTCCGTAGAAACA+AGG | - | chr8_4:14128411-14128430 | Msa1314980:intron | 40.0% | |
| GTGGAAGATAGAGAGACAAT+TGG | - | chr8_4:14128481-14128500 | Msa1314980:intron | 40.0% | |
| GAAGATAGAGAGACAATTGG+TGG | - | chr8_4:14128484-14128503 | Msa1314980:intron | 40.0% | |
| ! | TAGAGAGACAATTGGTGGTT+CGG | - | chr8_4:14128489-14128508 | Msa1314980:intron | 40.0% |
| !! | AAACTTGGTGTGTGCAATGA+AGG | - | chr8_4:14128556-14128575 | Msa1314980:CDS | 40.0% |
| TGATCCAAGGCTTAAGGATT+TGG | - | chr8_4:14128729-14128748 | Msa1314980:intron | 40.0% | |
| ACAACCAAATCCTTAAGCCT+TGG | + | chr8_4:14128736-14128755 | None:intergenic | 40.0% | |
| TTGTAGAAGGGAAAACGGTA+TGG | - | chr8_4:14128752-14128771 | Msa1314980:intron | 40.0% | |
| !! | TTTCATAGGTGCCATTCTAC+CGG | + | chr8_4:14128800-14128819 | None:intergenic | 40.0% |
| CATATGCAAAGGACATGAAC+TGG | + | chr8_4:14128831-14128850 | None:intergenic | 40.0% | |
| ! | TCCTTTGCATATGTGTTGCT+TGG | - | chr8_4:14128838-14128857 | Msa1314980:CDS | 40.0% |
| !! | CCTTTGCATATGTGTTGCTT+GGG | - | chr8_4:14128839-14128858 | Msa1314980:CDS | 40.0% |
| !!! | ATGTGTTGCTTGGGATCTTT+TGG | - | chr8_4:14128848-14128867 | Msa1314980:CDS | 40.0% |
| AGTGTTATGCAGTTCTGCAA+TGG | + | chr8_4:14128910-14128929 | None:intergenic | 40.0% | |
| !! | GCATGTTTGAGATGGCTTTT+TGG | - | chr8_4:14128944-14128963 | Msa1314980:CDS | 40.0% |
| TATGCCGAATTTAGCGAAAC+AGG | - | chr8_4:14128976-14128995 | Msa1314980:CDS | 40.0% | |
| ! | CGTTCTCTTGATAGTTCCAA+AGG | + | chr8_4:14129037-14129056 | None:intergenic | 40.0% |
| TCAAAGGTGATTATGCTTGG+TGG | - | chr8_4:14129129-14129148 | Msa1314980:CDS | 40.0% | |
| !! | CTTGAGTTGGTAGAACATGT+CGG | - | chr8_4:14129177-14129196 | Msa1314980:CDS | 40.0% |
| CGGTGCAATAAGTGATCTTT+CGG | - | chr8_4:14129197-14129216 | Msa1314980:CDS | 40.0% | |
| GGTGCAATAAGTGATCTTTC+GGG | - | chr8_4:14129198-14129217 | Msa1314980:CDS | 40.0% | |
| ! | GAGTCATTCATCGTTTTACG+TGG | + | chr8_4:14129439-14129458 | None:intergenic | 40.0% |
| CTCTGCTTATGCAATGTAAC+AGG | - | chr8_4:14129513-14129532 | Msa1314980:CDS | 40.0% | |
| ATGCAATGTAACAGGCTAGA+AGG | - | chr8_4:14129521-14129540 | Msa1314980:CDS | 40.0% | |
| TAGGAAGTTCACCAATGCTT+TGG | - | chr8_4:14129567-14129586 | Msa1314980:CDS | 40.0% | |
| ATGAGCAATGGCAAAATGCT+TGG | - | chr8_4:14129887-14129906 | Msa1314980:intron | 40.0% | |
| GTAAGACAGAACTTGCCAAA+AGG | + | chr8_4:14129923-14129942 | None:intergenic | 40.0% | |
| !! | GTCCTTTTGTTATCTAGGTC+CGG | - | chr8_4:14130015-14130034 | Msa1314980:intron | 40.0% |
| AACCGGACCTAGATAACAAA+AGG | + | chr8_4:14130020-14130039 | None:intergenic | 40.0% | |
| ! | TTTGTTATCTAGGTCCGGTT+TGG | - | chr8_4:14130020-14130039 | Msa1314980:intron | 40.0% |
| TTGTTATCTAGGTCCGGTTT+GGG | - | chr8_4:14130021-14130040 | Msa1314980:intron | 40.0% | |
| TCAAATAAGTCGACCCAAAC+CGG | + | chr8_4:14130037-14130056 | None:intergenic | 40.0% | |
| CTCACAAATGTTTATGCCAG+TGG | + | chr8_4:14130066-14130085 | None:intergenic | 40.0% | |
| AGACCAGTACAAGGAAACAA+TGG | - | chr8_4:14130481-14130500 | Msa1314980:intron | 40.0% | |
| CCAATCTTACAAGTAACTGC+AGG | + | chr8_4:14130711-14130730 | None:intergenic | 40.0% | |
| CCTGCAGTTACTTGTAAGAT+TGG | - | chr8_4:14130708-14130727 | Msa1314980:exon | 40.0% | |
| TATGCATGTATGCACATGGA+TGG | + | chr8_4:14130814-14130833 | None:intergenic | 40.0% | |
| CATGTATGCATGTATGCACA+TGG | + | chr8_4:14130818-14130837 | None:intergenic | 40.0% | |
| TGTGCATACATGCATACATG+TGG | - | chr8_4:14130818-14130837 | Msa1314980:five_prime_UTR | 40.0% | |
| GTGCATACATGCATACATGT+GGG | - | chr8_4:14130819-14130838 | Msa1314980:five_prime_UTR | 40.0% | |
| TGCATACATGCATACATGTG+GGG | - | chr8_4:14130820-14130839 | Msa1314980:five_prime_UTR | 40.0% | |
| !! | AACAAAAGCGTTGCCTTTGG+GGG | + | chr8_4:14127525-14127544 | None:intergenic | 45.0% |
| !! | CAACAAAAGCGTTGCCTTTG+GGG | + | chr8_4:14127526-14127545 | None:intergenic | 45.0% |
| !! | GACAACAAAAGCGTTGCCTT+TGG | + | chr8_4:14127528-14127547 | None:intergenic | 45.0% |
| !! | AACGCTTTTGTTGTCCATGG+AGG | - | chr8_4:14127533-14127552 | Msa1314980:three_prime_UTR | 45.0% |
| ACTGTCTTCATAAGCTAGCC+AGG | - | chr8_4:14128183-14128202 | Msa1314980:CDS | 45.0% | |
| ACTGGTGATCTGGCAAAACT+TGG | - | chr8_4:14128541-14128560 | Msa1314980:CDS | 45.0% | |
| CCGAATTCACTGTAGAAGGA+CGG | + | chr8_4:14128594-14128613 | None:intergenic | 45.0% | |
| CCGTCCTTCTACAGTGAATT+CGG | - | chr8_4:14128591-14128610 | Msa1314980:CDS | 45.0% | |
| CAGTCCGAATTCACTGTAGA+AGG | + | chr8_4:14128598-14128617 | None:intergenic | 45.0% | |
| CTTCTACAGTGAATTCGGAC+TGG | - | chr8_4:14128596-14128615 | Msa1314980:intron | 45.0% | |
| TCACTGTGATCCAAGGCTTA+AGG | - | chr8_4:14128723-14128742 | Msa1314980:intron | 45.0% | |
| !! | TTCATAGGTGCCATTCTACC+GGG | + | chr8_4:14128799-14128818 | None:intergenic | 45.0% |
| CCCAAGCAACACATATGCAA+AGG | + | chr8_4:14128842-14128861 | None:intergenic | 45.0% | |
| AACACTCGGCATGTTTGAGA+TGG | - | chr8_4:14128936-14128955 | Msa1314980:CDS | 45.0% | |
| AAACAGGAATCAGGCCAACT+GGG | - | chr8_4:14128992-14129011 | Msa1314980:CDS | 45.0% | |
| ACTGTATGGGCAGTTACCTT+TGG | - | chr8_4:14129018-14129037 | Msa1314980:CDS | 45.0% | |
| TCTTGGAGGCCTTACATCAA+AGG | - | chr8_4:14129113-14129132 | Msa1314980:CDS | 45.0% | |
| ! | TGCATCTGAAGTGCTTGAGT+TGG | - | chr8_4:14129164-14129183 | Msa1314980:CDS | 45.0% |
| GCTTCAGGTATTTATCCGCA+AGG | - | chr8_4:14129314-14129333 | Msa1314980:CDS | 45.0% | |
| ! | AGCGTGATATGATAGCCTTG+CGG | + | chr8_4:14129332-14129351 | None:intergenic | 45.0% |
| AGTAGCTGTGGTTGTATCTG+TGG | - | chr8_4:14129591-14129610 | Msa1314980:CDS | 45.0% | |
| GTAGCTGTGGTTGTATCTGT+GGG | - | chr8_4:14129592-14129611 | Msa1314980:CDS | 45.0% | |
| TGTGGGATGGATATGCTATG+AGG | - | chr8_4:14129609-14129628 | Msa1314980:CDS | 45.0% | |
| ACAGAACTTGCCAAAAGGCT+GGG | + | chr8_4:14129918-14129937 | None:intergenic | 45.0% | |
| TGTGTGTCATCTGTGTTGTC+TGG | - | chr8_4:14129950-14129969 | Msa1314980:intron | 45.0% | |
| GTGTGTCATCTGTGTTGTCT+GGG | - | chr8_4:14129951-14129970 | Msa1314980:intron | 45.0% | |
| ! | AAAGCTCGTCTTGTTACTGC+AGG | + | chr8_4:14130279-14130298 | None:intergenic | 45.0% |
| AGATATGCTTACCGTGACGA+TGG | - | chr8_4:14130373-14130392 | Msa1314980:intron | 45.0% | |
| GATATGCTTACCGTGACGAT+GGG | - | chr8_4:14130374-14130393 | Msa1314980:intron | 45.0% | |
| !! | AAAATAAAATAAAAACTAAA+AGG | + | chr8_4:14130637-14130656 | None:intergenic | 5.0% |
| AGCGAAACTTTCTCCCCCAA+AGG | - | chr8_4:14127509-14127528 | Msa1314980:three_prime_UTR | 50.0% | |
| !! | GGCAACGCTTTTGTTGTCCA+TGG | - | chr8_4:14127530-14127549 | Msa1314980:three_prime_UTR | 50.0% |
| GTTGTCCATGGAGGAAGTGA+AGG | - | chr8_4:14127542-14127561 | Msa1314980:three_prime_UTR | 50.0% | |
| AAGCTAGCCAGGAGAGCTTA+TGG | - | chr8_4:14128194-14128213 | Msa1314980:CDS | 50.0% | |
| ! | ACAATTGGTGGTTCGGCCTA+TGG | - | chr8_4:14128496-14128515 | Msa1314980:intron | 50.0% |
| TTCGGCCTATGGAGGTCAAA+GGG | - | chr8_4:14128507-14128526 | Msa1314980:intron | 50.0% | |
| ! | TGTCTGTTGCACTGGTGATC+TGG | - | chr8_4:14128531-14128550 | Msa1314980:CDS | 50.0% |
| TGGTGTGTGCAATGAAGGAC+AGG | - | chr8_4:14128561-14128580 | Msa1314980:CDS | 50.0% | |
| !!! | TCGGACTGGCCTCAAGTTTT+CGG | - | chr8_4:14128610-14128629 | Msa1314980:intron | 50.0% |
| ACGGTATGGAAGAATCCCTC+TGG | - | chr8_4:14128766-14128785 | Msa1314980:intron | 50.0% | |
| AATCCCTCTGGCTATCTACC+CGG | - | chr8_4:14128778-14128797 | Msa1314980:intron | 50.0% | |
| TGGCTATCTACCCGGTAGAA+TGG | - | chr8_4:14128786-14128805 | Msa1314980:intron | 50.0% | |
| GAAACAGGAATCAGGCCAAC+TGG | - | chr8_4:14128991-14129010 | Msa1314980:CDS | 50.0% | |
| GCCAACTGGGACAACTGTAT+GGG | - | chr8_4:14129005-14129024 | Msa1314980:CDS | 50.0% | |
| CTATCAAGAGAACGGTTGCG+AGG | - | chr8_4:14129043-14129062 | Msa1314980:CDS | 50.0% | |
| ! | GGTGTTGTGAGACCTACTCT+TGG | - | chr8_4:14129096-14129115 | Msa1314980:CDS | 50.0% |
| GTTGTGAGACCTACTCTTGG+AGG | - | chr8_4:14129099-14129118 | Msa1314980:CDS | 50.0% | |
| GATGTAAGGCCTCCAAGAGT+AGG | + | chr8_4:14129111-14129130 | None:intergenic | 50.0% | |
| AACACGTCTAATACGGCAGC+AGG | + | chr8_4:14129249-14129268 | None:intergenic | 50.0% | |
| CACAGCTACTGCCAAAGCAT+TGG | + | chr8_4:14129581-14129600 | None:intergenic | 50.0% | |
| CAATGCTTTGGCAGTAGCTG+TGG | - | chr8_4:14129579-14129598 | Msa1314980:CDS | 50.0% | |
| CTGTGGTTGTATCTGTGGGA+TGG | - | chr8_4:14129596-14129615 | Msa1314980:CDS | 50.0% | |
| ! | CTTGGATCATCCCAGCCTTT+TGG | - | chr8_4:14129905-14129924 | Msa1314980:intron | 50.0% |
| GACAGAACTTGCCAAAAGGC+TGG | + | chr8_4:14129919-14129938 | None:intergenic | 50.0% | |
| ATGGGAGCGAAGAGTTCGAT+AGG | - | chr8_4:14130392-14130411 | Msa1314980:intron | 50.0% | |
| TGGGAGCGAAGAGTTCGATA+GGG | - | chr8_4:14130393-14130412 | Msa1314980:intron | 50.0% | |
| ACCAAAGGATGTGAGTGTGC+CGG | - | chr8_4:14130453-14130472 | Msa1314980:intron | 50.0% | |
| ! | CCTTGTACTGGTCTAGCATC+CGG | + | chr8_4:14130475-14130494 | None:intergenic | 50.0% |
| AAGAGTGGGGTGTGGATCTG+TGG | + | chr8_4:14127399-14127418 | None:intergenic | 55.0% | |
| GAGAGAGAAAGAGTGGGGTG+TGG | + | chr8_4:14127407-14127426 | None:intergenic | 55.0% | |
| ! | ATTGGTGGTTCGGCCTATGG+AGG | - | chr8_4:14128499-14128518 | Msa1314980:intron | 55.0% |
| GTTCGGCCTATGGAGGTCAA+AGG | - | chr8_4:14128506-14128525 | Msa1314980:intron | 55.0% | |
| GACAGCCCTTTGACCTCCAT+AGG | + | chr8_4:14128515-14128534 | None:intergenic | 55.0% | |
| CAAAGGGCTGTCTGTTGCAC+TGG | - | chr8_4:14128523-14128542 | Msa1314980:CDS | 55.0% | |
| AACGCGACGCCGAAAACTTG+AGG | + | chr8_4:14128622-14128641 | None:intergenic | 55.0% | |
| CTACCGGGTAGATAGCCAGA+GGG | + | chr8_4:14128784-14128803 | None:intergenic | 55.0% | |
| TCTACCGGGTAGATAGCCAG+AGG | + | chr8_4:14128785-14128804 | None:intergenic | 55.0% | |
| GGCCAACTGGGACAACTGTA+TGG | - | chr8_4:14129004-14129023 | Msa1314980:CDS | 55.0% | |
| GCCCATACAGTTGTCCCAGT+TGG | + | chr8_4:14129009-14129028 | None:intergenic | 55.0% | |
| ACTCTTCGCTCCCATCGTCA+CGG | + | chr8_4:14130387-14130406 | None:intergenic | 55.0% | |
| TCCGGCACACTCACATCCTT+TGG | + | chr8_4:14130457-14130476 | None:intergenic | 55.0% | |
| CCGGATGCTAGACCAGTACA+AGG | - | chr8_4:14130472-14130491 | Msa1314980:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 14127305 | 14130843 | 14127305 | ID=Msa1314980;Name=Msa1314980 |
| chr8_4 | mRNA | 14127305 | 14130843 | 14127305 | ID=Msa1314980-mRNA-1;Parent=Msa1314980;Name=Msa1314980-mRNA-1;_AED=0.05;_eAED=0.05;_QI=126|1|1|1|1|1|5|300|505 |
| chr8_4 | exon | 14127305 | 14127773 | 14127305 | ID=Msa1314980-mRNA-1:exon:5324;Parent=Msa1314980-mRNA-1 |
| chr8_4 | exon | 14128153 | 14128289 | 14128153 | ID=Msa1314980-mRNA-1:exon:5323;Parent=Msa1314980-mRNA-1 |
| chr8_4 | exon | 14128518 | 14128613 | 14128518 | ID=Msa1314980-mRNA-1:exon:5322;Parent=Msa1314980-mRNA-1 |
| chr8_4 | exon | 14128828 | 14129746 | 14128828 | ID=Msa1314980-mRNA-1:exon:5321;Parent=Msa1314980-mRNA-1 |
| chr8_4 | exon | 14130521 | 14130843 | 14130521 | ID=Msa1314980-mRNA-1:exon:5320;Parent=Msa1314980-mRNA-1 |
| chr8_4 | five_prime_UTR | 14130718 | 14130843 | 14130718 | ID=Msa1314980-mRNA-1:five_prime_utr;Parent=Msa1314980-mRNA-1 |
| chr8_4 | CDS | 14130521 | 14130717 | 14130521 | ID=Msa1314980-mRNA-1:cds;Parent=Msa1314980-mRNA-1 |
| chr8_4 | CDS | 14128828 | 14129746 | 14128828 | ID=Msa1314980-mRNA-1:cds;Parent=Msa1314980-mRNA-1 |
| chr8_4 | CDS | 14128518 | 14128613 | 14128518 | ID=Msa1314980-mRNA-1:cds;Parent=Msa1314980-mRNA-1 |
| chr8_4 | CDS | 14128153 | 14128289 | 14128153 | ID=Msa1314980-mRNA-1:cds;Parent=Msa1314980-mRNA-1 |
| chr8_4 | CDS | 14127605 | 14127773 | 14127605 | ID=Msa1314980-mRNA-1:cds;Parent=Msa1314980-mRNA-1 |
| chr8_4 | three_prime_UTR | 14127305 | 14127604 | 14127305 | ID=Msa1314980-mRNA-1:three_prime_utr;Parent=Msa1314980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
