AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1165300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165300 MtrunA17_Chr7g0271551 93.243 370 7 3 1 357 1 365 0.0 702
Msa1165300 MtrunA17_Chr7g0273101 47.110 346 159 8 26 352 28 368 2.00e-102 306
Msa1165300 MtrunA17_Chr1g0191461 44.598 361 177 9 6 346 8 365 4.72e-97 292
Msa1165300 MtrunA17_Chr1g0160101 44.385 374 182 10 6 357 19 388 1.57e-95 289
Msa1165300 MtrunA17_Chr8g0381581 43.089 369 177 11 8 350 20 381 2.28e-95 289
Msa1165300 MtrunA17_Chr1g0159971 42.400 375 190 8 6 357 21 392 1.93e-93 284
Msa1165300 MtrunA17_Chr7g0254461 40.318 377 192 11 10 357 20 392 2.41e-91 279
Msa1165300 MtrunA17_Chr7g0226941 39.894 376 190 11 8 357 14 379 2.76e-89 273
Msa1165300 MtrunA17_Chr1g0159981 40.599 367 196 8 10 357 28 391 4.48e-87 268
Msa1165300 MtrunA17_Chr1g0159991 40.860 372 193 9 9 357 14 381 7.13e-86 264
Msa1165300 MtrunA17_Chr1g0160031 41.033 368 191 10 10 357 21 382 3.22e-84 260
Msa1165300 MtrunA17_Chr7g0226931 38.000 400 197 12 1 357 8 399 3.47e-84 261
Msa1165300 MtrunA17_Chr6g0450701 40.984 366 197 10 6 356 17 378 3.52e-82 254
Msa1165300 MtrunA17_Chr1g0160011 40.884 362 171 10 23 356 36 382 7.16e-81 251
Msa1165300 MtrunA17_Chr7g0226911 38.147 367 190 10 20 357 27 385 5.38e-80 249
Msa1165300 MtrunA17_Chr6g0450721 41.026 351 184 7 16 356 22 359 4.49e-78 243
Msa1165300 MtrunA17_Chr6g0450711 42.450 351 184 10 20 356 115 461 7.62e-78 246
Msa1165300 MtrunA17_Chr7g0275291 40.431 371 190 12 8 356 14 375 6.71e-76 239
Msa1165300 MtrunA17_Chr8g0352901 37.808 365 198 10 14 356 15 372 1.02e-74 235
Msa1165300 MtrunA17_Chr8g0347751 40.870 345 178 10 29 352 37 376 4.83e-74 234
Msa1165300 MtrunA17_Chr6g0450731 40.286 350 190 9 16 356 22 361 6.35e-71 225
Msa1165300 MtrunA17_Chr8g0339251 37.072 321 177 9 14 321 15 323 1.72e-59 195
Msa1165300 MtrunA17_Chr2g0283481 36.565 361 200 12 10 349 29 381 1.04e-57 192
Msa1165300 MtrunA17_Chr4g0057991 34.688 369 208 10 8 355 16 372 1.23e-56 189
Msa1165300 MtrunA17_Chr2g0283511 32.471 348 190 8 33 350 36 368 3.74e-52 177
Msa1165300 MtrunA17_Chr2g0283531 34.133 375 209 12 6 354 8 370 5.52e-52 176
Msa1165300 MtrunA17_Chr2g0283501 31.593 364 219 10 10 352 15 369 2.95e-51 174
Msa1165300 MtrunA17_Chr2g0301581 31.672 341 194 8 28 350 34 353 1.73e-47 164
Msa1165300 MtrunA17_Chr3g0104821 31.871 342 207 10 29 350 45 380 4.08e-47 164
Msa1165300 MtrunA17_Chr3g0112821 33.824 340 197 14 28 350 30 358 1.35e-46 162
Msa1165300 MtrunA17_Chr3g0093031 32.845 341 204 13 28 350 30 363 7.17e-46 160
Msa1165300 MtrunA17_Chr2g0301541 31.085 341 196 8 28 350 34 353 1.06e-45 159
Msa1165300 MtrunA17_Chr3g0096551 33.243 367 205 15 16 350 16 374 2.59e-44 156
Msa1165300 MtrunA17_Chr3g0112691 32.258 341 204 13 28 350 30 361 5.99e-44 155
Msa1165300 MtrunA17_Chr2g0317271 30.973 339 197 10 30 350 32 351 1.34e-42 151
Msa1165300 MtrunA17_Chr2g0317261 31.268 339 196 11 30 350 32 351 2.66e-42 150
Msa1165300 MtrunA17_Chr0c01g0489581 30.678 339 198 10 30 350 32 351 6.67e-42 149
Msa1165300 MtrunA17_Chr0c01g0489571 30.678 339 198 10 30 350 32 351 1.39e-41 149
Msa1165300 MtrunA17_Chr8g0344941 30.514 331 200 11 28 342 41 357 5.05e-37 137
Msa1165300 MtrunA17_Chr8g0349321 31.707 328 197 11 27 342 36 348 1.05e-36 136
Msa1165300 MtrunA17_Chr4g0068441 30.395 329 197 12 30 341 37 350 4.63e-35 131
Msa1165300 MtrunA17_Chr2g0301641 30.086 349 214 11 14 346 30 364 1.06e-34 131
Msa1165300 MtrunA17_Chr8g0349341 29.775 356 221 12 2 342 7 348 1.81e-34 130
Msa1165300 MtrunA17_Chr2g0294301 30.422 332 195 12 30 342 37 351 2.37e-34 129
Msa1165300 MtrunA17_Chr2g0320671 31.161 353 211 14 10 346 13 349 2.37e-34 129
Msa1165300 MtrunA17_Chr7g0275021 29.050 358 213 12 6 342 12 349 2.87e-34 129
Msa1165300 MtrunA17_Chr7g0275001 29.834 362 222 12 6 348 1 349 3.81e-34 129
Msa1165300 MtrunA17_Chr5g0432101 32.440 336 188 14 24 338 29 346 1.08e-33 128
Msa1165300 MtrunA17_Chr2g0294311 28.212 358 223 12 6 341 10 355 1.53e-33 127
Msa1165300 MtrunA17_Chr3g0131321 29.006 362 210 14 6 339 7 349 2.15e-32 125
Msa1165300 MtrunA17_Chr4g0046151 29.839 372 212 16 2 344 11 362 2.72e-32 124
Msa1165300 MtrunA17_Chr2g0301591 30.741 270 149 5 29 281 35 283 5.09e-32 121
Msa1165300 MtrunA17_Chr7g0275011 28.255 361 218 12 10 348 16 357 1.17e-31 122
Msa1165300 MtrunA17_Chr8g0344931 28.969 359 215 10 4 340 2 342 1.36e-31 122
Msa1165300 MtrunA17_Chr3g0104831 28.873 284 179 8 89 355 27 304 1.67e-31 120
Msa1165300 MtrunA17_Chr5g0396511 28.529 340 210 12 30 352 48 371 5.98e-31 120
Msa1165300 MtrunA17_Chr8g0341001 29.483 329 204 12 28 341 32 347 6.44e-31 120
Msa1165300 MtrunA17_Chr1g0189931 28.783 337 193 12 30 342 34 347 8.43e-31 120
Msa1165300 MtrunA17_Chr2g0301551 28.231 294 172 8 75 350 37 309 9.49e-31 119
Msa1165300 MtrunA17_Chr1g0156921 27.171 357 220 14 6 341 19 356 1.48e-30 119
Msa1165300 MtrunA17_Chr7g0274991 27.976 336 211 11 30 348 35 356 1.95e-30 119
Msa1165300 MtrunA17_Chr2g0285061 26.230 366 239 9 1 352 9 357 2.97e-30 118
Msa1165300 MtrunA17_Chr3g0092131 29.213 356 213 11 6 341 1 337 3.81e-30 118
Msa1165300 MtrunA17_Chr2g0283541 34.884 215 131 7 147 355 86 297 4.81e-30 116
Msa1165300 MtrunA17_Chr5g0438621 28.977 352 220 12 10 346 13 349 6.41e-30 117
Msa1165300 MtrunA17_Chr3g0105401 26.479 355 222 12 11 342 6 344 1.79e-29 116
Msa1165300 MtrunA17_Chr4g0027521 28.492 358 220 12 7 344 6 347 2.12e-29 116
Msa1165300 MtrunA17_Chr2g0301571 28.428 299 174 9 75 354 37 314 2.48e-29 115
Msa1165300 MtrunA17_Chr8g0349301 29.210 291 178 9 27 307 36 308 2.73e-29 115
Msa1165300 MtrunA17_Chr4g0060811 29.204 339 201 10 23 341 22 341 7.60e-29 114
Msa1165300 MtrunA17_Chr8g0349331 27.666 347 200 11 1 337 6 311 8.61e-29 114
Msa1165300 MtrunA17_Chr8g0374101 29.091 330 208 10 30 342 39 359 2.83e-28 113
Msa1165300 MtrunA17_Chr2g0330781 27.976 336 203 14 26 341 30 346 3.13e-28 112
Msa1165300 MtrunA17_Chr4g0008851 27.222 360 226 14 10 349 15 358 3.40e-28 113
Msa1165300 MtrunA17_Chr2g0283191 28.011 357 216 14 2 332 11 352 3.68e-28 113
Msa1165300 MtrunA17_Chr1g0189901 27.976 336 211 12 30 348 33 354 5.27e-28 112
Msa1165300 MtrunA17_Chr5g0438641 29.217 332 205 14 26 342 31 347 1.24e-27 111
Msa1165300 MtrunA17_Chr5g0438631 28.045 353 215 14 10 341 9 343 1.25e-27 111
Msa1165300 MtrunA17_Chr3g0099231 25.745 369 217 15 12 348 9 352 4.10e-27 110
Msa1165300 MtrunA17_Chr5g0444401 27.273 352 202 12 26 348 27 353 5.32e-27 109
Msa1165300 MtrunA17_Chr3g0120861 27.596 337 208 13 26 344 37 355 7.91e-27 109
Msa1165300 MtrunA17_Chr8g0371481 29.217 332 208 12 24 341 38 356 8.94e-27 108
Msa1165300 MtrunA17_Chr8g0371471 28.529 333 210 13 24 342 38 356 2.95e-26 107
Msa1165300 MtrunA17_Chr8g0380041 27.701 361 228 11 1 343 1 346 2.95e-26 107
Msa1165300 MtrunA17_Chr3g0142921 27.324 355 226 13 3 341 12 350 3.10e-26 107
Msa1165300 MtrunA17_Chr5g0405821 28.097 331 210 12 26 341 42 359 1.04e-25 106
Msa1165300 MtrunA17_Chr5g0434621 27.300 337 206 12 28 345 25 341 1.65e-25 105
Msa1165300 MtrunA17_Chr7g0215961 27.273 363 213 13 6 348 12 343 5.15e-25 103
Msa1165300 MtrunA17_Chr3g0086641 26.776 366 229 12 6 352 17 362 9.03e-25 103
Msa1165300 MtrunA17_Chr1g0182811 25.989 354 221 14 11 342 16 350 9.71e-25 103
Msa1165300 MtrunA17_Chr1g0156901 28.994 338 197 16 26 342 49 364 1.46e-24 103
Msa1165300 MtrunA17_Chr1g0156931 27.844 334 205 14 26 342 40 354 1.53e-24 102
Msa1165300 MtrunA17_Chr6g0457921 28.363 342 211 13 26 348 27 353 1.63e-24 102
Msa1165300 MtrunA17_Chr1g0156911 28.267 329 195 15 24 332 34 341 1.72e-24 102
Msa1165300 MtrunA17_Chr3g0142941 29.042 334 200 15 26 341 46 360 1.89e-24 102
Msa1165300 MtrunA17_Chr8g0371491 29.217 332 203 13 26 341 35 350 2.25e-24 102
Msa1165300 MtrunA17_Chr3g0099161 26.197 355 205 13 25 348 89 417 2.92e-24 102
Msa1165300 MtrunA17_Chr3g0077571 27.350 351 218 12 3 337 6 335 6.34e-24 100
Msa1165300 MtrunA17_Chr1g0156891 27.811 338 204 15 24 341 40 357 6.61e-24 101
Msa1165300 MtrunA17_Chr5g0405831 28.060 335 204 13 26 341 42 358 1.31e-23 100
Msa1165300 MtrunA17_Chr5g0437421 26.629 353 218 13 16 342 20 357 1.32e-23 100
Msa1165300 MtrunA17_Chr5g0420811 25.215 349 231 11 1 339 6 334 7.90e-23 97.8
Msa1165300 MtrunA17_Chr3g0077581 26.923 364 226 14 12 348 11 361 1.73e-22 97.1
Msa1165300 MtrunA17_Chr3g0099151 26.190 336 196 13 25 332 84 395 5.31e-21 93.6
Msa1165300 MtrunA17_Chr4g0017431 25.915 355 228 12 6 342 9 346 6.24e-21 92.8
Msa1165300 MtrunA17_Chr1g0157001 28.399 331 196 14 33 343 41 350 5.12e-20 90.1
Msa1165300 MtrunA17_Chr1g0198391 24.702 336 215 9 24 337 29 348 9.97e-20 89.4
Msa1165300 MtrunA17_Chr1g0189891 27.147 361 213 19 6 342 5 339 1.48e-19 88.6
Msa1165300 MtrunA17_Chr4g0027571 31.707 164 105 2 183 346 63 219 2.45e-19 85.9
Msa1165300 MtrunA17_Chr2g0301561 28.319 226 136 7 75 282 37 254 7.22e-19 85.1
Msa1165300 MtrunA17_Chr1g0178931 26.059 307 208 6 29 331 38 329 7.78e-19 86.7
Msa1165300 MtrunA17_Chr8g0380031 26.519 362 220 16 12 354 62 396 3.07e-18 85.5
Msa1165300 MtrunA17_Chr1g0198381 25.078 319 206 10 29 337 3 298 2.79e-17 81.6
Msa1165300 MtrunA17_Chr5g0440501 26.446 242 156 7 118 351 10 237 2.97e-17 80.5
Msa1165300 MtrunA17_Chr7g0266061 24.138 319 210 8 29 337 43 339 5.76e-17 81.3
Msa1165300 MtrunA17_Chr7g0229581 32.026 153 97 2 194 346 7 152 9.94e-17 76.6
Msa1165300 MtrunA17_Chr3g0085881 26.531 343 214 13 22 352 27 343 1.99e-16 79.3
Msa1165300 MtrunA17_Chr1g0198351 23.567 314 212 8 29 335 44 336 3.09e-16 79.0
Msa1165300 MtrunA17_Chr2g0284921 26.586 331 193 14 29 337 35 337 5.84e-16 78.2
Msa1165300 MtrunA17_Chr2g0285001 25.519 337 208 12 21 338 26 338 1.23e-15 77.4
Msa1165300 MtrunA17_Chr6g0455661 27.723 202 131 5 150 346 269 460 2.89e-15 76.6
Msa1165300 MtrunA17_Chr6g0459921 28.205 195 125 5 150 339 158 342 2.04e-14 73.6
Msa1165300 MtrunA17_Chr8g0370961 23.767 223 154 5 122 342 20 228 2.65e-14 72.0
Msa1165300 MtrunA17_Chr2g0284991 24.629 337 214 12 21 340 26 339 1.11e-13 71.6
Msa1165300 MtrunA17_Chr1g0178941 23.913 322 206 8 29 332 41 341 2.15e-12 67.4
Msa1165300 MtrunA17_Chr3g0104801 44.318 88 46 2 29 113 45 132 2.37e-12 65.1
Msa1165300 MtrunA17_Chr4g0018571 29.310 116 78 1 231 346 64 175 3.71e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1165300 AT1G09390.1 64.124 354 123 2 6 356 16 368 1.08e-174 490
Msa1165300 AT1G56670.1 61.127 355 134 3 6 357 19 372 1.37e-165 467
Msa1165300 AT3G62280.1 50.746 335 160 4 17 348 25 357 8.11e-125 363
Msa1165300 AT1G56670.2 61.786 280 103 3 6 282 19 297 4.39e-124 359
Msa1165300 AT1G54790.1 46.243 346 161 7 30 352 33 376 1.55e-104 312
Msa1165300 AT1G54790.3 44.054 370 178 9 6 352 14 377 7.23e-102 306
Msa1165300 AT1G54790.2 43.011 372 161 8 30 352 33 402 1.16e-98 298
Msa1165300 AT3G62280.2 50.916 273 129 4 17 286 25 295 1.22e-93 281
Msa1165300 AT3G05180.1 44.575 341 165 9 26 346 35 371 1.06e-91 280
Msa1165300 AT3G26430.1 42.466 365 184 9 14 356 18 378 4.06e-90 275
Msa1165300 AT1G67830.1 44.118 340 164 11 23 340 26 361 6.91e-87 267
Msa1165300 AT5G14450.1 41.322 363 181 11 19 357 33 387 4.14e-83 258
Msa1165300 AT3G27950.1 41.081 370 194 10 1 351 1 365 7.52e-81 251
Msa1165300 AT4G01130.1 41.351 370 181 11 10 352 14 374 5.94e-75 236
Msa1165300 AT1G31550.2 35.027 374 210 12 5 356 13 375 5.94e-56 187
Msa1165300 AT4G01130.3 38.908 293 148 8 84 352 3 288 2.77e-55 183
Msa1165300 AT2G27360.1 33.333 366 211 10 14 356 19 374 5.50e-54 182
Msa1165300 AT1G28610.2 34.160 363 208 12 8 348 11 364 6.45e-54 182
Msa1165300 AT4G01130.2 41.438 292 145 9 10 282 14 298 7.35e-53 178
Msa1165300 AT1G28640.1 33.607 366 212 10 7 348 11 369 3.30e-52 178
Msa1165300 AT1G28650.1 33.333 366 215 9 6 348 12 371 5.60e-52 177
Msa1165300 AT1G31550.1 34.225 374 210 13 5 356 13 372 1.03e-51 176
Msa1165300 AT1G28580.1 33.894 357 202 11 23 356 32 377 1.42e-51 176
Msa1165300 AT3G48460.1 32.597 362 202 10 17 349 21 369 1.69e-50 173
Msa1165300 AT1G28600.1 33.333 366 213 12 12 356 15 370 3.09e-50 173
Msa1165300 AT1G28570.1 32.447 376 219 12 6 356 9 374 3.10e-50 172
Msa1165300 AT1G28590.1 34.933 375 209 14 6 356 13 376 1.44e-49 171
Msa1165300 AT1G28670.1 32.976 373 206 11 7 348 11 370 5.94e-49 169
Msa1165300 AT5G45910.1 33.424 368 213 10 6 348 9 369 9.78e-48 166
Msa1165300 AT1G28660.1 32.240 366 217 10 7 348 11 369 8.85e-46 160
Msa1165300 AT1G28660.2 32.240 366 216 11 7 348 11 368 2.59e-44 157
Msa1165300 AT1G28580.2 30.693 303 183 9 72 357 5 297 6.46e-35 130
Msa1165300 AT1G53920.1 28.205 351 229 8 15 353 35 374 2.20e-33 127
Msa1165300 AT5G22810.1 30.312 353 219 12 9 346 16 356 2.79e-33 127
Msa1165300 AT5G40990.1 30.168 358 216 14 6 342 12 356 1.46e-32 125
Msa1165300 AT3G16370.1 30.000 340 198 12 28 346 30 350 1.63e-32 125
Msa1165300 AT5G03820.1 31.343 335 194 12 26 341 32 349 4.41e-32 124
Msa1165300 AT5G03820.2 30.618 356 209 13 6 341 40 377 6.39e-32 124
Msa1165300 AT1G71120.1 27.356 329 211 8 14 330 17 329 6.95e-32 123
Msa1165300 AT3G50400.1 30.114 352 216 13 18 348 23 365 1.33e-31 122
Msa1165300 AT1G29660.1 27.859 341 210 8 30 352 34 356 1.50e-31 122
Msa1165300 AT3G14225.2 31.143 350 207 13 15 342 19 356 1.51e-31 122
Msa1165300 AT1G29670.1 28.412 359 225 12 10 352 13 355 5.77e-31 120
Msa1165300 AT1G74460.1 30.114 352 207 14 10 342 7 338 8.65e-31 120
Msa1165300 AT3G14225.1 30.791 354 207 13 15 342 19 360 9.25e-31 120
Msa1165300 AT4G26790.1 28.319 339 212 12 19 341 20 343 1.91e-30 119
Msa1165300 AT4G26790.2 28.319 339 212 12 19 341 20 343 1.91e-30 119
Msa1165300 AT2G42990.1 30.029 343 213 11 9 337 9 338 2.71e-30 119
Msa1165300 AT1G29670.2 29.191 346 213 12 10 339 81 410 3.33e-30 120
Msa1165300 AT1G23500.1 31.532 333 195 9 21 342 28 338 3.51e-30 118
Msa1165300 AT2G23540.1 29.179 329 207 10 30 341 50 369 4.36e-30 119
Msa1165300 AT5G63170.1 30.357 336 195 12 10 332 12 321 9.04e-30 117
Msa1165300 AT2G40250.1 28.615 325 207 11 29 338 37 351 1.06e-29 117
Msa1165300 AT5G03810.1 30.702 342 186 14 26 341 29 345 3.23e-29 115
Msa1165300 AT2G30310.1 27.887 355 213 14 8 338 12 347 5.61e-29 115
Msa1165300 AT4G10950.2 27.052 329 207 12 29 340 72 384 5.99e-29 116
Msa1165300 AT5G33370.1 28.955 335 209 10 30 348 32 353 1.82e-28 114
Msa1165300 AT1G28570.3 32.353 204 130 4 158 356 11 211 1.88e-28 110
Msa1165300 AT1G28570.2 28.938 273 180 6 91 356 37 302 3.56e-28 112
Msa1165300 AT1G53940.2 29.819 332 206 11 27 342 38 358 1.40e-27 112
Msa1165300 AT1G73610.1 31.180 356 197 14 6 342 11 337 1.85e-27 110
Msa1165300 AT2G04570.1 26.891 357 230 11 8 349 8 348 2.01e-27 110
Msa1165300 AT3G53100.1 28.024 339 220 10 20 346 22 348 2.52e-27 110
Msa1165300 AT5G42170.1 29.538 325 203 10 29 341 51 361 2.96e-27 110
Msa1165300 AT5G41890.1 27.778 360 213 14 10 341 17 357 4.35e-27 110
Msa1165300 AT5G45950.1 28.274 336 194 15 29 343 41 350 4.80e-27 110
Msa1165300 AT4G18970.1 26.347 334 225 9 30 352 30 353 4.85e-27 110
Msa1165300 AT4G10950.1 27.027 333 198 13 29 340 72 380 4.85e-27 110
Msa1165300 AT4G18970.2 26.347 334 225 9 30 352 30 353 6.35e-27 110
Msa1165300 AT3G04290.1 29.032 341 211 12 25 348 26 352 9.80e-27 109
Msa1165300 AT5G45670.1 26.124 356 240 10 10 352 9 354 1.18e-26 108
Msa1165300 AT5G15720.1 28.070 342 205 11 30 348 32 355 2.20e-26 108
Msa1165300 AT4G28780.1 27.419 372 215 14 10 348 5 354 4.22e-26 107
Msa1165300 AT5G08460.1 27.164 335 215 12 29 346 50 372 5.00e-26 107
Msa1165300 AT2G30220.1 28.228 333 200 12 29 340 34 348 8.02e-26 106
Msa1165300 AT1G75880.2 27.891 294 182 9 62 341 89 366 8.52e-26 107
Msa1165300 AT2G24560.1 26.346 353 221 13 8 338 12 347 1.49e-25 106
Msa1165300 AT5G03610.1 26.198 313 210 6 25 330 40 338 1.86e-25 105
Msa1165300 AT2G31540.1 26.944 360 218 15 7 338 6 348 1.92e-25 105
Msa1165300 AT1G75900.1 29.607 331 204 12 26 342 42 357 1.99e-25 105
Msa1165300 AT1G20135.1 28.571 336 201 11 10 332 13 322 2.46e-25 104
Msa1165300 AT1G54030.1 29.022 317 187 11 29 336 53 340 3.01e-25 105
Msa1165300 AT1G33811.1 27.807 374 217 12 6 348 10 361 3.34e-25 105
Msa1165300 AT1G75880.1 27.273 297 181 9 62 341 89 367 4.18e-25 105
Msa1165300 AT5G45960.1 27.640 322 202 12 27 330 46 354 8.77e-25 103
Msa1165300 AT1G71691.2 27.576 330 204 11 29 342 56 366 1.78e-24 103
Msa1165300 AT1G71250.1 26.536 358 218 12 8 339 15 353 1.91e-24 103
Msa1165300 AT1G06990.1 26.667 345 225 11 16 345 25 356 2.64e-24 102
Msa1165300 AT5G03980.1 26.393 341 207 12 10 342 12 316 1.22e-23 100
Msa1165300 AT3G09930.2 26.646 319 202 8 25 330 36 335 5.59e-23 98.6
Msa1165300 AT3G09930.1 26.646 319 202 8 25 330 36 335 5.59e-23 98.6
Msa1165300 AT5G37690.1 26.039 361 215 14 10 341 2 339 5.96e-23 98.6
Msa1165300 AT5G18430.1 26.849 365 216 13 10 348 14 353 9.32e-23 98.2
Msa1165300 AT1G20132.1 29.762 336 207 14 24 345 58 378 9.52e-23 98.6
Msa1165300 AT1G58430.1 26.061 330 207 11 29 338 36 348 1.37e-22 97.8
Msa1165300 AT1G20120.1 27.988 343 192 13 28 342 78 393 1.57e-22 98.2
Msa1165300 AT1G53990.1 28.732 355 210 15 10 340 10 345 8.15e-22 95.5
Msa1165300 AT1G75890.1 25.656 343 215 11 24 339 44 373 2.17e-21 94.7
Msa1165300 AT1G75890.2 25.904 332 215 11 24 339 44 360 2.59e-21 94.4
Msa1165300 AT1G75890.3 25.904 332 215 11 24 339 73 389 4.95e-21 93.6
Msa1165300 AT1G75930.1 28.809 361 208 13 3 341 2 335 1.86e-20 91.3
Msa1165300 AT1G71691.1 27.881 269 162 9 85 339 12 262 3.09e-20 89.7
Msa1165300 AT2G19060.1 26.703 367 212 14 8 348 6 341 3.33e-20 90.9
Msa1165300 AT1G20130.1 28.363 342 207 15 26 345 203 528 3.64e-20 92.0
Msa1165300 AT2G24560.2 26.667 300 186 11 8 285 12 299 4.09e-20 90.1
Msa1165300 AT1G20130.2 28.363 342 207 15 26 345 183 508 5.76e-20 91.3
Msa1165300 AT5G15720.3 26.923 286 171 9 84 348 56 324 7.11e-20 89.7
Msa1165300 AT3G14820.1 28.358 335 200 15 26 342 31 343 8.78e-20 89.7
Msa1165300 AT1G59406.1 26.099 364 223 16 1 341 1 341 8.94e-20 89.7
Msa1165300 AT1G59030.1 26.099 364 223 16 1 341 1 341 8.94e-20 89.7
Msa1165300 AT1G58725.1 26.099 364 223 16 1 341 1 341 8.94e-20 89.7
Msa1165300 AT1G54030.2 28.044 271 164 9 29 291 53 300 2.64e-19 87.8
Msa1165300 AT1G54020.2 29.080 337 199 17 18 341 22 331 3.16e-19 88.2
Msa1165300 AT5G55050.1 26.705 352 202 15 29 348 40 367 6.76e-19 87.4
Msa1165300 AT5G33370.2 27.715 267 171 7 30 282 32 290 1.80e-18 85.5
Msa1165300 AT5G37690.2 24.862 362 210 13 10 341 2 331 2.80e-18 85.1
Msa1165300 AT2G19010.1 25.344 363 223 12 8 349 5 340 5.69e-18 84.3
Msa1165300 AT2G19010.2 25.414 362 222 12 9 349 36 370 8.43e-18 84.3
Msa1165300 AT1G54010.1 26.844 339 211 15 8 332 15 330 1.12e-17 84.0
Msa1165300 AT1G58520.3 26.190 336 198 15 26 341 29 334 1.77e-17 82.8
Msa1165300 AT1G58525.1 26.190 336 198 15 26 341 29 334 1.77e-17 82.8
Msa1165300 AT3G14220.1 27.221 349 215 17 3 338 10 332 2.23e-17 82.8
Msa1165300 AT1G53940.1 28.839 267 172 8 27 282 38 297 2.73e-17 82.0
Msa1165300 AT1G28610.1 34.343 198 105 10 12 192 15 204 3.58e-17 80.5
Msa1165300 AT2G31550.1 28.351 194 126 5 152 340 24 209 5.43e-17 79.3
Msa1165300 AT1G54000.1 25.749 334 211 14 18 337 25 335 7.44e-17 81.6
Msa1165300 AT5G15720.2 26.277 274 168 8 30 282 32 292 6.39e-16 78.2
Msa1165300 AT1G71691.3 26.667 270 168 9 29 282 56 311 1.32e-15 77.0
Msa1165300 AT4G16233.1 35.088 114 70 2 229 342 4 113 2.07e-15 72.8
Msa1165300 AT1G28600.2 31.980 197 111 8 12 192 15 204 2.20e-15 74.7
Msa1165300 AT2G03980.2 24.000 325 212 11 30 337 45 351 2.48e-15 76.6
Msa1165300 AT2G03980.3 24.000 325 212 11 30 337 45 351 2.48e-15 76.6
Msa1165300 AT2G03980.1 24.000 325 212 11 30 337 45 351 2.48e-15 76.6
Msa1165300 AT2G03980.4 24.000 325 212 11 30 337 45 351 2.48e-15 76.6
Msa1165300 AT4G16230.1 34.171 199 115 9 30 215 32 227 2.78e-15 75.1
Msa1165300 AT3G43550.1 24.585 301 179 14 11 282 5 286 1.19e-13 70.9
Msa1165300 AT1G75920.1 27.147 361 182 19 26 342 23 346 1.55e-13 71.2
Msa1165300 AT5G03600.1 26.814 317 187 13 29 330 15 301 1.28e-12 68.2
Msa1165300 AT5G03600.2 26.814 317 187 13 29 330 50 336 1.69e-12 68.2
Msa1165300 AT1G75920.3 27.353 340 162 17 26 342 28 305 3.04e-12 67.0
Msa1165300 AT1G54020.1 27.344 256 154 11 94 341 14 245 5.16e-11 63.2
Msa1165300 AT1G54020.5 27.344 256 154 11 94 341 14 245 5.16e-11 63.2
Msa1165300 AT1G54020.3 27.344 256 154 11 94 341 14 245 5.16e-11 63.2

Find 118 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAGAGAAAGGAAGATATTT+TGG 0.128198 7_4:+57135517 None:intergenic
ATGAAGGTGGCAGGAAATTT+TGG 0.130037 7_4:-57133796 Msa1165300:CDS
GATACGGGTGGACTCGTTTC+AGG 0.202731 7_4:-57136743 Msa1165300:CDS
TGTGATGAGGTCATTCTTAA+TGG 0.202835 7_4:+57133580 None:intergenic
TGAGACAGTGCAATTAATTT+AGG 0.214283 7_4:+57133743 None:intergenic
GCACTATACTTGATTGATAT+TGG 0.224234 7_4:-57134860 Msa1165300:CDS
CTTGCTTGGATTACCATATT+TGG 0.259524 7_4:+57133550 None:intergenic
TATTTGCAGCCTCGGTAAAA+TGG 0.261572 7_4:+57133128 None:intergenic
ATCACAAATGCCACCAAATA+TGG 0.281135 7_4:-57133563 Msa1165300:intron
TGGCATTCTCACTTGTTCTA+TGG 0.285339 7_4:-57136838 Msa1165300:CDS
TCCTTTCTCTTTAAATATAC+AGG 0.293831 7_4:-57135506 Msa1165300:CDS
CCAGACATGGAGTCCAAGTA+TGG 0.324420 7_4:+57135592 None:intergenic
ACTCTTGCATCGAAATTATA+AGG 0.325762 7_4:+57133217 None:intergenic
TCCACGCCACACATACCTTT+TGG 0.337158 7_4:-57133070 Msa1165300:CDS
CTAATGGTATGCTGCGGCTT+TGG 0.352290 7_4:-57133247 Msa1165300:CDS
TGATCAACGACCAAGGCTTC+CGG 0.357053 7_4:-57134886 Msa1165300:CDS
TTCCCTGTCAATCTTCCTAA+TGG 0.357240 7_4:-57136713 Msa1165300:CDS
CAACTGAATAAACCTGTTCT+TGG 0.365267 7_4:+57132936 None:intergenic
AAAATCTTGTATTCAAACTT+TGG 0.366532 7_4:+57135620 None:intergenic
AAGAAGGATCTGGATTCATT+TGG 0.373469 7_4:-57133719 Msa1165300:CDS
CGACACTTGAGTATGAGTTT+TGG 0.377393 7_4:-57136866 Msa1165300:exon
TGAAATTGAGAATGCTGTTA+AGG 0.381641 7_4:-57134759 Msa1165300:intron
GATCAACGACCAAGGCTTCC+GGG 0.385168 7_4:-57134885 Msa1165300:CDS
CCATACTTGGACTCCATGTC+TGG 0.388444 7_4:-57135592 Msa1165300:CDS
ATGGTATGCTGCGGCTTTGG+AGG 0.400442 7_4:-57133244 Msa1165300:CDS
TGAAAGAAAGTACGACCATT+AGG 0.407363 7_4:+57136698 None:intergenic
CGGTGATTCGAACTCGGATA+CGG 0.414137 7_4:-57136759 Msa1165300:CDS
ATTTGCCAAAGGAGAGGGTT+TGG 0.426120 7_4:-57132841 Msa1165300:three_prime_UTR
GTTCACAATACCGGGCCCTT+TGG 0.433699 7_4:-57133773 Msa1165300:CDS
GGCTACGAGCTTTGAAATGT+TGG 0.434142 7_4:+57135473 None:intergenic
TAACGAAGTAGAAGGTAGAT+TGG 0.434428 7_4:-57136906 Msa1165300:five_prime_UTR
CAATTTCAGTGATAACTGTT+GGG 0.436636 7_4:+57134774 None:intergenic
ACCCATGTCGCATTGTTGCC+AGG 0.439143 7_4:-57132884 Msa1165300:three_prime_UTR
GGATTGCCCGCCCGTGTTTG+TGG 0.441434 7_4:-57137047 None:intergenic
GAAATTAAGAACTGAATTGA+AGG 0.443148 7_4:-57133633 Msa1165300:CDS
CTATGTACTTCTCCAAGAAC+AGG 0.443972 7_4:-57132948 Msa1165300:three_prime_UTR
AAACACCAAACCCTCTCCTT+TGG 0.447036 7_4:+57132836 None:intergenic
TCAATTTCAGTGATAACTGT+TGG 0.447405 7_4:+57134773 None:intergenic
CAAGAACAGGTTTATTCAGT+TGG 0.448382 7_4:-57132935 Msa1165300:three_prime_UTR
GGTTATCAAGTTTGTGATGA+AGG 0.453176 7_4:-57133178 Msa1165300:CDS
AGTGAGTATAACGAAGTAGA+AGG 0.456695 7_4:-57136914 Msa1165300:five_prime_UTR
AGGTTTCACAAATCCGCTAA+TGG 0.459526 7_4:-57133263 Msa1165300:CDS
GCAACAATGCGACATGGGTC+AGG 0.460131 7_4:+57132888 None:intergenic
GCTTGGATTACCATATTTGG+TGG 0.461252 7_4:+57133553 None:intergenic
ACCTGTATATTTAAAGAGAA+AGG 0.465233 7_4:+57135505 None:intergenic
GGAGCAAACTTTGCAGTGGT+TGG 0.466134 7_4:-57135553 Msa1165300:CDS
CGGTTGAAATGAAGAGAATC+CGG 0.470757 7_4:-57136973 Msa1165300:five_prime_UTR
TTCTTGGAGAAGTACATAGA+TGG 0.479093 7_4:+57132952 None:intergenic
CGACCATTAGGAAGATTGAC+AGG 0.481582 7_4:+57136710 None:intergenic
TAATAATAAATTAATAATAG+AGG 0.486535 7_4:+57132704 None:intergenic
AGCCTTCAGCTTGCTACCTC+AGG 0.490541 7_4:-57135454 Msa1165300:intron
GGTGGACTCGTTTCAGGACT+CGG 0.491006 7_4:-57136737 Msa1165300:CDS
AAGATGGGTTTGAAGCAATC+TGG 0.491734 7_4:-57137014 Msa1165300:five_prime_UTR
ATAAATATCAACATAGACTA+AGG 0.496645 7_4:+57133604 None:intergenic
TCCACTGGTCGTTTGTCTGA+TGG 0.496988 7_4:-57136671 Msa1165300:CDS
ATGAAATAGTCTAATGATTG+AGG 0.501948 7_4:-57132631 Msa1165300:three_prime_UTR
AATTGCACTGTCTCAAAAGA+AGG 0.503409 7_4:-57133735 Msa1165300:CDS
TTACCGAGGCTGCAAATACA+TGG 0.504350 7_4:-57133123 Msa1165300:CDS
CAACCGCTTGATTCATCACA+CGG 0.505492 7_4:+57136990 None:intergenic
AAGCCGCAGCATACCATTAG+CGG 0.506464 7_4:+57133250 None:intergenic
GGTGATTCGAACTCGGATAC+GGG 0.507267 7_4:-57136758 Msa1165300:CDS
AAGGATCACGGTATGTGAGT+TGG 0.509966 7_4:-57133159 Msa1165300:CDS
ACTGTCTCAAAAGAAGGATC+TGG 0.515499 7_4:-57133729 Msa1165300:CDS
GTTTGCTCCATTTGTGAATG+TGG 0.523898 7_4:+57135567 None:intergenic
TCTGGATCCACATTCACAAA+TGG 0.524287 7_4:-57135574 Msa1165300:CDS
GTCTTTCCCACCACAAACAC+GGG 0.527154 7_4:+57137037 None:intergenic
TTGTTATTTGCCAAAGGAGA+GGG 0.528079 7_4:-57132846 Msa1165300:three_prime_UTR
AGGATCACGGTATGTGAGTT+GGG 0.534367 7_4:-57133158 Msa1165300:CDS
CCGAACATGAATATTACTGC+TGG 0.534426 7_4:+57136779 None:intergenic
ACTTTCTTTCACAGATCCAC+TGG 0.535217 7_4:-57136686 Msa1165300:CDS
TATCCATGTATTTGCAGCCT+CGG 0.535519 7_4:+57133120 None:intergenic
TGCCCGCCCGTGTTTGTGGT+GGG 0.536285 7_4:-57137043 None:intergenic
AGGAAGACAGCCAAAGGGCC+CGG 0.536593 7_4:+57133763 None:intergenic
TTGCCCGCCCGTGTTTGTGG+TGG 0.537475 7_4:-57137044 None:intergenic
TGGTATGCTGCGGCTTTGGA+GGG 0.540229 7_4:-57133243 Msa1165300:CDS
TTGTGGTGGGAAAGACAAGA+TGG 0.540717 7_4:-57137030 Msa1165300:five_prime_UTR
CCAGCAGTAATATTCATGTT+CGG 0.541488 7_4:-57136779 Msa1165300:CDS
CAGTGACAGAAGAAACCAAA+AGG 0.542378 7_4:+57133055 None:intergenic
TATCATTCGATACTATGTTC+CGG 0.542781 7_4:+57136954 None:intergenic
GTTTGTATAATGAAGGTGGC+AGG 0.543630 7_4:-57133805 Msa1165300:CDS
CATGTTCGGTGATTCGAACT+CGG 0.544957 7_4:-57136765 Msa1165300:CDS
ACCTGGCAACAATGCGACAT+GGG 0.547446 7_4:+57132883 None:intergenic
TCACGGTATGTGAGTTGGGA+TGG 0.549362 7_4:-57133154 Msa1165300:CDS
ATAGTGCATCCCGGAAGCCT+TGG 0.557801 7_4:+57134876 None:intergenic
CAGACATGGAGTCCAAGTAT+GGG 0.559260 7_4:+57135593 None:intergenic
TGTGGTGGGAAAGACAAGAT+GGG 0.565874 7_4:-57137029 Msa1165300:five_prime_UTR
TGTCTTTCCCACCACAAACA+CGG 0.569529 7_4:+57137036 None:intergenic
AACCTGGCAACAATGCGACA+TGG 0.572447 7_4:+57132882 None:intergenic
TCTATGAGTGTTGTTAGTAG+TGG 0.579747 7_4:-57136812 Msa1165300:CDS
AGAGTGACATGCGGTCAACC+TGG 0.580356 7_4:-57133199 Msa1165300:CDS
TAATTTAGGAAGACAGCCAA+AGG 0.581756 7_4:+57133757 None:intergenic
TCATCACAAACTTGATAACC+AGG 0.588648 7_4:+57133181 None:intergenic
AATTTAGGAAGACAGCCAAA+GGG 0.591424 7_4:+57133758 None:intergenic
ACCAAAAGGTATGTGTGGCG+TGG 0.596206 7_4:+57133069 None:intergenic
ATGCAGAGTTTGTATAATGA+AGG 0.601225 7_4:-57133812 Msa1165300:intron
ATTTGGTGGCATTTGTGATG+AGG 0.601509 7_4:+57133567 None:intergenic
TCCATCAGACAAACGACCAG+TGG 0.606932 7_4:+57136670 None:intergenic
CAGAGTTTGTATAATGAAGG+TGG 0.611951 7_4:-57133809 Msa1165300:CDS
CAATCAAGTATAGTGCATCC+CGG 0.612384 7_4:+57134867 None:intergenic
GATAACTGTTGGGATCCTCT+TGG 0.622350 7_4:+57134784 None:intergenic
TACCTGAGGTAGCAAGCTGA+AGG 0.627506 7_4:+57135452 None:intergenic
TTTGTTATTTGCCAAAGGAG+AGG 0.629900 7_4:-57132847 Msa1165300:three_prime_UTR
CAAAACTCATACTCAAGTGT+CGG 0.631269 7_4:+57136867 None:intergenic
ATTAAACTATGCACATTACG+AGG 0.632497 7_4:-57133019 Msa1165300:three_prime_UTR
AAGAAACCAAAAGGTATGTG+TGG 0.633267 7_4:+57133064 None:intergenic
AAATGGAGCAAACTTTGCAG+TGG 0.643021 7_4:-57135557 Msa1165300:CDS
AAGTTTGTGATGAAGGATCA+CGG 0.647050 7_4:-57133171 Msa1165300:CDS
GATTCGAACTCGGATACGGG+TGG 0.665881 7_4:-57136755 Msa1165300:CDS
AGACATGGAGTCCAAGTATG+GGG 0.667647 7_4:+57135594 None:intergenic
CATATGTGCAAGTCACCAAG+AGG 0.667936 7_4:-57134799 Msa1165300:CDS
CTTGCATCGAAATTATAAGG+TGG 0.680956 7_4:+57133220 None:intergenic
TGTGAATGTGGATCCAGACA+TGG 0.686318 7_4:+57135579 None:intergenic
AATCCGCTAATGGTATGCTG+CGG 0.695188 7_4:-57133253 Msa1165300:CDS
TTCGATGCAAGAGTGACATG+CGG 0.705186 7_4:-57133208 Msa1165300:CDS
TTAAACTATGCACATTACGA+GGG 0.705838 7_4:-57133018 Msa1165300:three_prime_UTR
GACCATTAGGAAGATTGACA+GGG 0.712629 7_4:+57136711 None:intergenic
AACAGAGAAAGTCGATAACG+AGG 0.712922 7_4:+57136645 None:intergenic
GGTCCGTGTGATGAATCAAG+CGG 0.742122 7_4:-57136993 Msa1165300:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTATTTTTTTTA+AGG - chr7_4:57136846-57136865 Msa1165300:CDS 0.0%
!! ATATAAATCATATATGATTA+TGG + chr7_4:57133591-57133610 None:intergenic 10.0%
!!! TATAAACCATATATTTTTTT+TGG + chr7_4:57133621-57133640 None:intergenic 10.0%
!!! TAATTTTATAATCATTAATC+AGG + chr7_4:57134395-57134414 None:intergenic 10.0%
!! TAAATTTATTTGTTTCATAA+TGG - chr7_4:57134970-57134989 Msa1165300:intron 10.0%
!!! ATTTATTTTTGAACCAATTA+CGG - chr7_4:57133346-57133365 Msa1165300:intron 15.0%
!! TATGTACCAAAAAAAATATA+TGG - chr7_4:57133612-57133631 Msa1165300:CDS 15.0%
!!! AATAATTTTTCACTTACTAA+TGG - chr7_4:57133870-57133889 Msa1165300:intron 15.0%
!!! TTTAAGGTTATTACTAATAT+TGG + chr7_4:57133974-57133993 None:intergenic 15.0%
!! AAAAATATTCATCAGATTTA+AGG + chr7_4:57133990-57134009 None:intergenic 15.0%
!! TTATAAAATTAGTGTTATAG+TGG - chr7_4:57134404-57134423 Msa1165300:intron 15.0%
!! ATGAAACAAATAAATTTAGT+CGG + chr7_4:57134968-57134987 None:intergenic 15.0%
!!! AATTTAATTTTCTGTCATAA+AGG + chr7_4:57135096-57135115 None:intergenic 15.0%
!!! TTTATCCTAATTTTGATTTT+GGG + chr7_4:57135261-57135280 None:intergenic 15.0%
!!! TTTTATCCTAATTTTGATTT+TGG + chr7_4:57135262-57135281 None:intergenic 15.0%
!! AAATGTATATATATGTAATC+AGG + chr7_4:57135460-57135479 None:intergenic 15.0%
!! TTACATATATATACATTTCA+TGG - chr7_4:57135462-57135481 Msa1165300:CDS 15.0%
!! AAAAATCTTGATCTTATTAT+TGG - chr7_4:57135777-57135796 Msa1165300:intron 15.0%
!! TTGATTATTATTATTAGACT+CGG - chr7_4:57136141-57136160 Msa1165300:intron 15.0%
!!! ATTTTATTTTAAACTGCAGT+AGG - chr7_4:57133292-57133311 Msa1165300:intron 20.0%
!!! TTTATTTTTGAACCAATTAC+GGG - chr7_4:57133347-57133366 Msa1165300:intron 20.0%
!!! TCTAAGACAAAAAAAACAAA+CGG - chr7_4:57133512-57133531 Msa1165300:intron 20.0%
!!! ACTAGTGTTTTTTTAAAGTT+GGG + chr7_4:57133538-57133557 None:intergenic 20.0%
!!! AACTAGTGTTTTTTTAAAGT+TGG + chr7_4:57133539-57133558 None:intergenic 20.0%
!!! AATATTTTTCTTCAAACCAT+TGG - chr7_4:57134001-57134020 Msa1165300:intron 20.0%
!! AAAATCTTGTATTCAAACTT+TGG + chr7_4:57134031-57134050 None:intergenic 20.0%
!! CAATCAAATATTTCAAACAA+GGG + chr7_4:57134301-57134320 None:intergenic 20.0%
!!! TAGTTTTCTTTTCTTTTCTT+TGG + chr7_4:57134581-57134600 None:intergenic 20.0%
!! AAAATCAAGAAATTTAGAGA+TGG + chr7_4:57135167-57135186 None:intergenic 20.0%
!! TGATTCCTACTTATAATAAA+AGG - chr7_4:57135339-57135358 Msa1165300:intron 20.0%
!!! AGAAACCTTTTATTATAAGT+AGG + chr7_4:57135347-57135366 None:intergenic 20.0%
!!! TATAAACTAAAGTATCAAAC+CGG + chr7_4:57135384-57135403 None:intergenic 20.0%
!! TATTGAATAAACTCATTGTT+TGG + chr7_4:57135513-57135532 None:intergenic 20.0%
!! AGTTTATTCAATAAGATTCT+TGG - chr7_4:57135520-57135539 Msa1165300:CDS 20.0%
!!! AGTTTCTTTTATTATTACTC+AGG - chr7_4:57135611-57135630 Msa1165300:CDS 20.0%
!!! GTTTCTTTTATTATTACTCA+GGG - chr7_4:57135612-57135631 Msa1165300:CDS 20.0%
!! ATAAATATCAACATAGACTA+AGG + chr7_4:57136047-57136066 None:intergenic 20.0%
!! TGATTATTATTATTAGACTC+GGG - chr7_4:57136142-57136161 Msa1165300:intron 20.0%
!! TTGTTAATACATTATCAAAC+AGG - chr7_4:57136365-57136384 Msa1165300:intron 20.0%
!!! TATGAACTCTCTAAAAAAAA+AGG - chr7_4:57136982-57137001 Msa1165300:five_prime_UTR 20.0%
!! TACTCTTACTAAGATTAGTT+TGG - chr7_4:57133152-57133171 Msa1165300:CDS 25.0%
! TAATCGATAATTTCAAGACA+CGG + chr7_4:57133324-57133343 None:intergenic 25.0%
!! CGATTTCTTTTATAGATAGA+CGG - chr7_4:57133713-57133732 Msa1165300:CDS 25.0%
! ACAAAAATGCAAAAATTGCT+AGG + chr7_4:57133801-57133820 None:intergenic 25.0%
!! AGCAATTTTTGCATTTTTGT+CGG - chr7_4:57133801-57133820 Msa1165300:CDS 25.0%
!! AAGAGAAAGGAAGATATTTT+GGG + chr7_4:57134133-57134152 None:intergenic 25.0%
!! AAAGAGAAAGGAAGATATTT+TGG + chr7_4:57134134-57134153 None:intergenic 25.0%
! TCCTTTCTCTTTAAATATAC+AGG - chr7_4:57134142-57134161 Msa1165300:intron 25.0%
! ACCTGTATATTTAAAGAGAA+AGG + chr7_4:57134146-57134165 None:intergenic 25.0%
! GCAATCAAATATTTCAAACA+AGG + chr7_4:57134302-57134321 None:intergenic 25.0%
! GAATTAATTGCAATGCAAAT+AGG - chr7_4:57134728-57134747 Msa1165300:intron 25.0%
!! TTGCACATATGATAGATTTT+TGG + chr7_4:57134840-57134859 None:intergenic 25.0%
! ATAAATTTAGTCGGATTCAT+AGG + chr7_4:57134959-57134978 None:intergenic 25.0%
! TTGTTTCATAATGGTGATTT+AGG - chr7_4:57134979-57134998 Msa1165300:intron 25.0%
!!! CCACTTTTTTTTCACTTTTA+CGG - chr7_4:57135065-57135084 Msa1165300:intron 25.0%
! AGTACTCAATAAAAGGAAAA+GGG + chr7_4:57135121-57135140 None:intergenic 25.0%
! AAGTACTCAATAAAAGGAAA+AGG + chr7_4:57135122-57135141 None:intergenic 25.0%
!!! TAAAGGAAGTACTCAATAAA+AGG + chr7_4:57135128-57135147 None:intergenic 25.0%
! TTTCTCCCAAAATCAAAATT+AGG - chr7_4:57135253-57135272 Msa1165300:intron 25.0%
! TGTATATATATGTAATCAGG+TGG + chr7_4:57135457-57135476 None:intergenic 25.0%
!! TTTATTGTGTGTTTTCGTTT+TGG - chr7_4:57135573-57135592 Msa1165300:CDS 25.0%
! CTTCATTTGTAATTGGATAA+AGG - chr7_4:57135637-57135656 Msa1165300:intron 25.0%
! GAAATTAAGAACTGAATTGA+AGG - chr7_4:57136015-57136034 Msa1165300:intron 25.0%
!!! CATCATATTGTTTTAGTTCT+AGG - chr7_4:57136197-57136216 Msa1165300:intron 25.0%
! CAAATAACAAAAACACTATC+TGG + chr7_4:57136792-57136811 None:intergenic 25.0%
! ATGAAATAGTCTAATGATTG+AGG - chr7_4:57137017-57137036 Msa1165300:five_prime_UTR 25.0%
TATCATTCGATACTATGTTC+CGG + chr7_4:57132697-57132716 None:intergenic 30.0%
! GAACATAGTATCGAATGATA+CGG - chr7_4:57132697-57132716 Msa1165300:three_prime_UTR 30.0%
! AACATAGTATCGAATGATAC+GGG - chr7_4:57132698-57132717 Msa1165300:three_prime_UTR 30.0%
!! ACTAAGATTAGTTTGGTATC+TGG - chr7_4:57133159-57133178 Msa1165300:CDS 30.0%
!!! TTATTTTAAACTGCAGTAGG+TGG - chr7_4:57133295-57133314 Msa1165300:intron 30.0%
!! TATTTTAAACTGCAGTAGGT+GGG - chr7_4:57133296-57133315 Msa1165300:intron 30.0%
AATCGATAATTTCAAGACAC+GGG + chr7_4:57133323-57133342 None:intergenic 30.0%
! GTGTGAAAGTTTAATTTCAG+TGG - chr7_4:57133477-57133496 Msa1165300:intron 30.0%
TATTATCCTGGTAACTCTTA+TGG + chr7_4:57133657-57133676 None:intergenic 30.0%
ATAAGAGTTACCAGGATAAT+AGG - chr7_4:57133656-57133675 Msa1165300:CDS 30.0%
TAAGAGTTACCAGGATAATA+GGG - chr7_4:57133657-57133676 Msa1165300:CDS 30.0%
TAGGGAACACGTTAAATTAT+TGG - chr7_4:57133675-57133694 Msa1165300:CDS 30.0%
!! AAGCACTGAAAAATTACAAC+CGG - chr7_4:57133893-57133912 Msa1165300:intron 30.0%
GTGAACGAAATAAAAAGCAA+AGG + chr7_4:57134231-57134250 None:intergenic 30.0%
TGAGGAAATAAGAGGAAAAT+CGG + chr7_4:57134362-57134381 None:intergenic 30.0%
GATACATACAGATGAAATTG+AGG - chr7_4:57134621-57134640 Msa1165300:intron 30.0%
AAAAATATGATCAACGACCA+AGG - chr7_4:57134755-57134774 Msa1165300:intron 30.0%
GCACTATACTTGATTGATAT+TGG - chr7_4:57134788-57134807 Msa1165300:CDS 30.0%
! TTTTGGTAAATGAATCAGCA+AGG + chr7_4:57134823-57134842 None:intergenic 30.0%
CAATTTCAGTGATAACTGTT+GGG + chr7_4:57134877-57134896 None:intergenic 30.0%
TCAATTTCAGTGATAACTGT+TGG + chr7_4:57134878-57134897 None:intergenic 30.0%
TGAAATTGAGAATGCTGTTA+AGG - chr7_4:57134889-57134908 Msa1165300:CDS 30.0%
GTGATTTAGGTATAGCTAAA+AGG - chr7_4:57134992-57135011 Msa1165300:intron 30.0%
! AGTTTTCCTCTCAAAAATAG+TGG + chr7_4:57135042-57135061 None:intergenic 30.0%
CCGTAAAAGTGAAAAAAAAG+TGG + chr7_4:57135068-57135087 None:intergenic 30.0%
GTACTCAATAAAAGGAAAAG+GGG + chr7_4:57135120-57135139 None:intergenic 30.0%
! TAGGATAAAAAAGTGTGAAG+TGG - chr7_4:57135272-57135291 Msa1165300:intron 30.0%
! ATAAAAAAGTGTGAAGTGGT+TGG - chr7_4:57135276-57135295 Msa1165300:intron 30.0%
TTTCTCCAGTACATAAAATC+CGG - chr7_4:57135362-57135381 Msa1165300:intron 30.0%
ATTCAATAAGATTCTTGGCA+TGG - chr7_4:57135525-57135544 Msa1165300:CDS 30.0%
!! TCTTATTATTGGTTCTCCAT+TGG - chr7_4:57135788-57135807 Msa1165300:intron 30.0%
ATGCAGAGTTTGTATAATGA+AGG - chr7_4:57135836-57135855 Msa1165300:intron 30.0%
!!! AAATTTTGGGTTCACAATAC+CGG - chr7_4:57135866-57135885 Msa1165300:intron 30.0%
TGAGACAGTGCAATTAATTT+AGG + chr7_4:57135908-57135927 None:intergenic 30.0%
ACTCTTGCATCGAAATTATA+AGG + chr7_4:57136434-57136453 None:intergenic 30.0%
ATTAAACTATGCACATTACG+AGG - chr7_4:57136629-57136648 Msa1165300:intron 30.0%
TTAAACTATGCACATTACGA+GGG - chr7_4:57136630-57136649 Msa1165300:intron 30.0%
!!! GTGTTTTTGTTATTTGCCAA+AGG - chr7_4:57136796-57136815 Msa1165300:CDS 30.0%
AATGATACGGGCAATAAAGT+AGG - chr7_4:57132710-57132729 Msa1165300:three_prime_UTR 35.0%
AGTGAGTATAACGAAGTAGA+AGG - chr7_4:57132734-57132753 Msa1165300:three_prime_UTR 35.0%
TAACGAAGTAGAAGGTAGAT+TGG - chr7_4:57132742-57132761 Msa1165300:three_prime_UTR 35.0%
CAAAACTCATACTCAAGTGT+CGG + chr7_4:57132784-57132803 None:intergenic 35.0%
! TCTATGAGTGTTGTTAGTAG+TGG - chr7_4:57132836-57132855 Msa1165300:three_prime_UTR 35.0%
CCAGCAGTAATATTCATGTT+CGG - chr7_4:57132869-57132888 Msa1165300:three_prime_UTR 35.0%
! TGAAAGAAAGTACGACCATT+AGG + chr7_4:57132953-57132972 None:intergenic 35.0%
! ATTTTAAACTGCAGTAGGTG+GGG - chr7_4:57133297-57133316 Msa1165300:intron 35.0%
TGATAAATGCCGAAACTGTA+AGG - chr7_4:57133424-57133443 Msa1165300:intron 35.0%
! TTTTTCTTCAAACCATTGGC+AGG - chr7_4:57134005-57134024 Msa1165300:intron 35.0%
! AAGATTTTTGACCCCATACT+TGG - chr7_4:57134043-57134062 Msa1165300:intron 35.0%
!! GAAAGGAAGATATTTTGGGA+GGG + chr7_4:57134129-57134148 None:intergenic 35.0%
!! AGAAAGGAAGATATTTTGGG+AGG + chr7_4:57134130-57134149 None:intergenic 35.0%
AAAGGAAATCTATGTACCTG+AGG + chr7_4:57134213-57134232 None:intergenic 35.0%
GAACTCAATGAGGAAATAAG+AGG + chr7_4:57134370-57134389 None:intergenic 35.0%
TAATCAGGAAGAACTCAATG+AGG + chr7_4:57134380-57134399 None:intergenic 35.0%
TATGCTGGAACTTGATAGAA+CGG - chr7_4:57134455-57134474 Msa1165300:intron 35.0%
TTGATGCATATGCAAAGTAG+AGG - chr7_4:57134501-57134520 Msa1165300:intron 35.0%
!!! ACTGATCCACTATTTTTGAG+AGG - chr7_4:57135033-57135052 Msa1165300:intron 35.0%
ACTTCCTTTACTTTGTAGCA+AGG - chr7_4:57135138-57135157 Msa1165300:intron 35.0%
GAAACCTTGCTACAAAGTAA+AGG + chr7_4:57135145-57135164 None:intergenic 35.0%
! TCAAACCGGATTTTATGTAC+TGG + chr7_4:57135370-57135389 None:intergenic 35.0%
ATATGTAATCAGGTGGTGTA+TGG + chr7_4:57135450-57135469 None:intergenic 35.0%
! CAGGGTACTTCATTTGTAAT+TGG - chr7_4:57135630-57135649 Msa1165300:intron 35.0%
TGAACTAAGCATCAAACCAA+TGG + chr7_4:57135807-57135826 None:intergenic 35.0%
CAGAGTTTGTATAATGAAGG+TGG - chr7_4:57135839-57135858 Msa1165300:intron 35.0%
!!! AATTTTGGGTTCACAATACC+GGG - chr7_4:57135867-57135886 Msa1165300:intron 35.0%
AATTTAGGAAGACAGCCAAA+GGG + chr7_4:57135893-57135912 None:intergenic 35.0%
TAATTTAGGAAGACAGCCAA+AGG + chr7_4:57135894-57135913 None:intergenic 35.0%
AATTGCACTGTCTCAAAAGA+AGG - chr7_4:57135913-57135932 Msa1165300:intron 35.0%
AAGAAGGATCTGGATTCATT+TGG - chr7_4:57135929-57135948 Msa1165300:intron 35.0%
TGTGATGAGGTCATTCTTAA+TGG + chr7_4:57136071-57136090 None:intergenic 35.0%
ATCACAAATGCCACCAAATA+TGG - chr7_4:57136085-57136104 Msa1165300:intron 35.0%
CTTGCTTGGATTACCATATT+TGG + chr7_4:57136101-57136120 None:intergenic 35.0%
! ATGAGAATAAAGTGCTTGCT+TGG + chr7_4:57136115-57136134 None:intergenic 35.0%
!!! GTTTTAGTTCTAGGTTCCAT+TGG - chr7_4:57136206-57136225 Msa1165300:intron 35.0%
!! CACTCAACAATGTTTTTCAG+AGG + chr7_4:57136312-57136331 None:intergenic 35.0%
CTTGCATCGAAATTATAAGG+TGG + chr7_4:57136431-57136450 None:intergenic 35.0%
! TCATCACAAACTTGATAACC+AGG + chr7_4:57136470-57136489 None:intergenic 35.0%
GGTTATCAAGTTTGTGATGA+AGG - chr7_4:57136470-57136489 Msa1165300:intron 35.0%
AAGTTTGTGATGAAGGATCA+CGG - chr7_4:57136477-57136496 Msa1165300:intron 35.0%
! AAGAAACCAAAAGGTATGTG+TGG + chr7_4:57136587-57136606 None:intergenic 35.0%
! TTCTTGGAGAAGTACATAGA+TGG + chr7_4:57136699-57136718 None:intergenic 35.0%
CAACTGAATAAACCTGTTCT+TGG + chr7_4:57136715-57136734 None:intergenic 35.0%
CAAGAACAGGTTTATTCAGT+TGG - chr7_4:57136713-57136732 Msa1165300:CDS 35.0%
!! TTTGTTATTTGCCAAAGGAG+AGG - chr7_4:57136801-57136820 Msa1165300:CDS 35.0%
!! TTGTTATTTGCCAAAGGAGA+GGG - chr7_4:57136802-57136821 Msa1165300:CDS 35.0%
! AAGATGGGTTTGAAGCAATC+TGG - chr7_4:57132634-57132653 Msa1165300:three_prime_UTR 40.0%
CGGTTGAAATGAAGAGAATC+CGG - chr7_4:57132675-57132694 Msa1165300:three_prime_UTR 40.0%
! CGACACTTGAGTATGAGTTT+TGG - chr7_4:57132782-57132801 Msa1165300:three_prime_UTR 40.0%
!! CACTTGAGTATGAGTTTTGG+CGG - chr7_4:57132785-57132804 Msa1165300:three_prime_UTR 40.0%
TGGCATTCTCACTTGTTCTA+TGG - chr7_4:57132810-57132829 Msa1165300:three_prime_UTR 40.0%
CCGAACATGAATATTACTGC+TGG + chr7_4:57132872-57132891 None:intergenic 40.0%
TTCCCTGTCAATCTTCCTAA+TGG - chr7_4:57132935-57132954 Msa1165300:three_prime_UTR 40.0%
GACCATTAGGAAGATTGACA+GGG + chr7_4:57132940-57132959 None:intergenic 40.0%
ACTTTCTTTCACAGATCCAC+TGG - chr7_4:57132962-57132981 Msa1165300:three_prime_UTR 40.0%
AACAGAGAAAGTCGATAACG+AGG + chr7_4:57133006-57133025 None:intergenic 40.0%
ATTGAAGAAAGCAGAAACCG+CGG + chr7_4:57133381-57133400 None:intergenic 40.0%
CGGCATTTATCAATTGAGCT+AGG + chr7_4:57133416-57133435 None:intergenic 40.0%
GACATACCATAAGAGTTACC+AGG - chr7_4:57133648-57133667 Msa1165300:CDS 40.0%
TAACGTGTTCCCTATTATCC+TGG + chr7_4:57133669-57133688 None:intergenic 40.0%
!! GCATTTTTGTCGGTTGAGAT+AGG - chr7_4:57133811-57133830 Msa1165300:intron 40.0%
!! CGTCACTCTCTTTTTAGTAC+CGG + chr7_4:57133915-57133934 None:intergenic 40.0%
CGGTACTAAAAAGAGAGTGA+CGG - chr7_4:57133913-57133932 Msa1165300:intron 40.0%
GGTACTAAAAAGAGAGTGAC+GGG - chr7_4:57133914-57133933 Msa1165300:intron 40.0%
GTACTAAAAAGAGAGTGACG+GGG - chr7_4:57133915-57133934 Msa1165300:intron 40.0%
TCTGGATCCACATTCACAAA+TGG - chr7_4:57134074-57134093 Msa1165300:intron 40.0%
GTTTGCTCCATTTGTGAATG+TGG + chr7_4:57134084-57134103 None:intergenic 40.0%
AAATGGAGCAAACTTTGCAG+TGG - chr7_4:57134091-57134110 Msa1165300:intron 40.0%
!! AAGATATTTTGGGAGGGTAG+AGG + chr7_4:57134123-57134142 None:intergenic 40.0%
GGAAATAAGAGGAAAATCGG+TGG + chr7_4:57134359-57134378 None:intergenic 40.0%
CGTGTAACTATCATAGCGTT+TGG - chr7_4:57134428-57134447 Msa1165300:intron 40.0%
ATAGCGTTTGGTAGATATGC+TGG - chr7_4:57134440-57134459 Msa1165300:intron 40.0%
CAATCAAGTATAGTGCATCC+CGG + chr7_4:57134784-57134803 None:intergenic 40.0%
! TGCGAGTGTTGTAAACCTTT+GGG - chr7_4:57135310-57135329 Msa1165300:intron 40.0%
TAGGAATCAAACTACCCCAA+AGG + chr7_4:57135328-57135347 None:intergenic 40.0%
CACACTGTAACTCATTATCG+TGG - chr7_4:57135416-57135435 Msa1165300:intron 40.0%
AAACTTCTCATGTGTGCATG+AGG + chr7_4:57135556-57135575 None:intergenic 40.0%
GTGAATCAGTAGCAAACGTA+TGG + chr7_4:57135708-57135727 None:intergenic 40.0%
GTTTGTATAATGAAGGTGGC+AGG - chr7_4:57135843-57135862 Msa1165300:intron 40.0%
! ATGAAGGTGGCAGGAAATTT+TGG - chr7_4:57135852-57135871 Msa1165300:intron 40.0%
! TGAAGGTGGCAGGAAATTTT+GGG - chr7_4:57135853-57135872 Msa1165300:intron 40.0%
ACTGTCTCAAAAGAAGGATC+TGG - chr7_4:57135919-57135938 Msa1165300:intron 40.0%
! ATTTGGTGGCATTTGTGATG+AGG + chr7_4:57136084-57136103 None:intergenic 40.0%
GCTTGGATTACCATATTTGG+TGG + chr7_4:57136098-57136117 None:intergenic 40.0%
! TTTTACGTGTTCGCTTCCAA+TGG + chr7_4:57136225-57136244 None:intergenic 40.0%
TTATGAAATCTCTGCTGCAG+TGG - chr7_4:57136267-57136286 Msa1165300:intron 40.0%
AGGTTTCACAAATCCGCTAA+TGG - chr7_4:57136385-57136404 Msa1165300:intron 40.0%
TATTTGCAGCCTCGGTAAAA+TGG + chr7_4:57136523-57136542 None:intergenic 40.0%
TATCCATGTATTTGCAGCCT+CGG + chr7_4:57136531-57136550 None:intergenic 40.0%
CAGTGACAGAAGAAACCAAA+AGG + chr7_4:57136596-57136615 None:intergenic 40.0%
CTATGTACTTCTCCAAGAAC+AGG - chr7_4:57136700-57136719 Msa1165300:CDS 40.0%
! CAAAAACACTATCTGGAACC+TGG + chr7_4:57136785-57136804 None:intergenic 40.0%
! TTGTGGTGGGAAAGACAAGA+TGG - chr7_4:57132618-57132637 Msa1165300:three_prime_UTR 45.0%
! TGTGGTGGGAAAGACAAGAT+GGG - chr7_4:57132619-57132638 Msa1165300:three_prime_UTR 45.0%
CAACCGCTTGATTCATCACA+CGG + chr7_4:57132661-57132680 None:intergenic 45.0%
! CATGTTCGGTGATTCGAACT+CGG - chr7_4:57132883-57132902 Msa1165300:three_prime_UTR 45.0%
CGACCATTAGGAAGATTGAC+AGG + chr7_4:57132941-57132960 None:intergenic 45.0%
CACAGTGAAGATGAACACGA+AGG + chr7_4:57133248-57133267 None:intergenic 45.0%
TTGAAGAAAGCAGAAACCGC+GGG + chr7_4:57133380-57133399 None:intergenic 45.0%
TGTGTGTGTGTGAGAGTTTC+TGG + chr7_4:57133753-57133772 None:intergenic 45.0%
AACTCTCACACACACACAAG+TGG - chr7_4:57133755-57133774 Msa1165300:CDS 45.0%
GCAAAAATTGCTAGGACCTG+TGG + chr7_4:57133793-57133812 None:intergenic 45.0%
! AAAAGAGAGTGACGGGGAAT+TGG - chr7_4:57133921-57133940 Msa1165300:intron 45.0%
! AAAGAGAGTGACGGGGAATT+GGG - chr7_4:57133922-57133941 Msa1165300:intron 45.0%
TTCAAACTTTGGCCTGCCAA+TGG + chr7_4:57134020-57134039 None:intergenic 45.0%
AGACATGGAGTCCAAGTATG+GGG + chr7_4:57134057-57134076 None:intergenic 45.0%
CAGACATGGAGTCCAAGTAT+GGG + chr7_4:57134058-57134077 None:intergenic 45.0%
TGTGAATGTGGATCCAGACA+TGG + chr7_4:57134072-57134091 None:intergenic 45.0%
!! GGCTACGAGCTTTGAAATGT+TGG + chr7_4:57134178-57134197 None:intergenic 45.0%
CAAACAAGGGTCAGAAGAAC+AGG + chr7_4:57134288-57134307 None:intergenic 45.0%
GGTGTATGCATACTGCTAAG+AGG + chr7_4:57134338-57134357 None:intergenic 45.0%
CATATGTGCAAGTCACCAAG+AGG - chr7_4:57134849-57134868 Msa1165300:CDS 45.0%
GATAACTGTTGGGATCCTCT+TGG + chr7_4:57134867-57134886 None:intergenic 45.0%
! GTGCGAGTGTTGTAAACCTT+TGG - chr7_4:57135309-57135328 Msa1165300:intron 45.0%
! GCGAGTGTTGTAAACCTTTG+GGG - chr7_4:57135311-57135330 Msa1165300:intron 45.0%
GTAACTCATTATCGTGGCAG+TGG - chr7_4:57135422-57135441 Msa1165300:intron 45.0%
AATCCGCTAATGGTATGCTG+CGG - chr7_4:57136395-57136414 Msa1165300:intron 45.0%
TTCGATGCAAGAGTGACATG+CGG - chr7_4:57136440-57136459 Msa1165300:intron 45.0%
AAGGATCACGGTATGTGAGT+TGG - chr7_4:57136489-57136508 Msa1165300:intron 45.0%
AGGATCACGGTATGTGAGTT+GGG - chr7_4:57136490-57136509 Msa1165300:intron 45.0%
! GGATGGAATCCATTTTACCG+AGG - chr7_4:57136511-57136530 Msa1165300:intron 45.0%
TTACCGAGGCTGCAAATACA+TGG - chr7_4:57136525-57136544 Msa1165300:intron 45.0%
ATTTGCCAAAGGAGAGGGTT+TGG - chr7_4:57136807-57136826 Msa1165300:CDS 45.0%
AAACACCAAACCCTCTCCTT+TGG + chr7_4:57136815-57136834 None:intergenic 45.0%
!! TAATAATAAATTAATAATAG+AGG + chr7_4:57136947-57136966 None:intergenic 5.0%
GGTCCGTGTGATGAATCAAG+CGG - chr7_4:57132655-57132674 Msa1165300:three_prime_UTR 50.0%
!! GAGTATGAGTTTTGGCGGTG+TGG - chr7_4:57132790-57132809 Msa1165300:three_prime_UTR 50.0%
CGGTGATTCGAACTCGGATA+CGG - chr7_4:57132889-57132908 Msa1165300:three_prime_UTR 50.0%
GGTGATTCGAACTCGGATAC+GGG - chr7_4:57132890-57132909 Msa1165300:three_prime_UTR 50.0%
TCCACTGGTCGTTTGTCTGA+TGG - chr7_4:57132977-57132996 Msa1165300:three_prime_UTR 50.0%
TCCATCAGACAAACGACCAG+TGG + chr7_4:57132981-57133000 None:intergenic 50.0%
GAAGATGAACACGAAGGCGA+AGG + chr7_4:57133242-57133261 None:intergenic 50.0%
AATTACGGGTCCATATCCCG+CGG - chr7_4:57133361-57133380 Msa1165300:intron 50.0%
AAAGCAGAAACCGCGGGATA+TGG + chr7_4:57133374-57133393 None:intergenic 50.0%
!! GACGTCTGGCCTTACAGTTT+CGG + chr7_4:57133436-57133455 None:intergenic 50.0%
TCTCACACACACACAAGTGG+AGG - chr7_4:57133758-57133777 Msa1165300:CDS 50.0%
ACACACACAAGTGGAGGATC+CGG - chr7_4:57133764-57133783 Msa1165300:CDS 50.0%
! AAGAGAGTGACGGGGAATTG+GGG - chr7_4:57133923-57133942 Msa1165300:intron 50.0%
CCAGACATGGAGTCCAAGTA+TGG + chr7_4:57134059-57134078 None:intergenic 50.0%
CCATACTTGGACTCCATGTC+TGG - chr7_4:57134056-57134075 Msa1165300:intron 50.0%
GGAGCAAACTTTGCAGTGGT+TGG - chr7_4:57134095-57134114 Msa1165300:intron 50.0%
TACCTGAGGTAGCAAGCTGA+AGG + chr7_4:57134199-57134218 None:intergenic 50.0%
TGATCAACGACCAAGGCTTC+CGG - chr7_4:57134762-57134781 Msa1165300:CDS 50.0%
AAGCCGCAGCATACCATTAG+CGG + chr7_4:57136401-57136420 None:intergenic 50.0%
CTAATGGTATGCTGCGGCTT+TGG - chr7_4:57136401-57136420 Msa1165300:intron 50.0%
! TCACGGTATGTGAGTTGGGA+TGG - chr7_4:57136494-57136513 Msa1165300:intron 50.0%
! TCCACGCCACACATACCTTT+TGG - chr7_4:57136578-57136597 Msa1165300:intron 50.0%
! ACCAAAAGGTATGTGTGGCG+TGG + chr7_4:57136582-57136601 None:intergenic 50.0%
ACCTGGCAACAATGCGACAT+GGG + chr7_4:57136768-57136787 None:intergenic 50.0%
AACCTGGCAACAATGCGACA+TGG + chr7_4:57136769-57136788 None:intergenic 50.0%
GATTCGAACTCGGATACGGG+TGG - chr7_4:57132893-57132912 Msa1165300:three_prime_UTR 55.0%
! GATACGGGTGGACTCGTTTC+AGG - chr7_4:57132905-57132924 Msa1165300:three_prime_UTR 55.0%
! GGTGGACTCGTTTCAGGACT+CGG - chr7_4:57132911-57132930 Msa1165300:three_prime_UTR 55.0%
GCGGGATATGGACCCGTAAT+TGG + chr7_4:57133362-57133381 None:intergenic 55.0%
TTGCTAGGACCTGTGGACAC+CGG + chr7_4:57133786-57133805 None:intergenic 55.0%
!! AGCCTTCAGCTTGCTACCTC+AGG - chr7_4:57134194-57134213 Msa1165300:intron 55.0%
GATCAACGACCAAGGCTTCC+GGG - chr7_4:57134763-57134782 Msa1165300:CDS 55.0%
ATAGTGCATCCCGGAAGCCT+TGG + chr7_4:57134775-57134794 None:intergenic 55.0%
GTTCACAATACCGGGCCCTT+TGG - chr7_4:57135875-57135894 Msa1165300:intron 55.0%
! ATGGTATGCTGCGGCTTTGG+AGG - chr7_4:57136404-57136423 Msa1165300:intron 55.0%
!! TGGTATGCTGCGGCTTTGGA+GGG - chr7_4:57136405-57136424 Msa1165300:intron 55.0%
AGAGTGACATGCGGTCAACC+TGG - chr7_4:57136449-57136468 Msa1165300:intron 55.0%
GCAACAATGCGACATGGGTC+AGG + chr7_4:57136763-57136782 None:intergenic 55.0%
ACCCATGTCGCATTGTTGCC+AGG - chr7_4:57136764-57136783 Msa1165300:CDS 55.0%
GAACACGAAGGCGAAGGCGA+AGG + chr7_4:57133236-57133255 None:intergenic 60.0%
TAAGGCCAGACGTCGCAACG+CGG - chr7_4:57133442-57133461 Msa1165300:intron 60.0%
AGGAAGACAGCCAAAGGGCC+CGG + chr7_4:57135888-57135907 None:intergenic 60.0%
GAAGGCGAAGGCGGAGGATG+TGG + chr7_4:57133212-57133231 None:intergenic 65.0%
GAAGGCGAAGGCGAAGGCGA+AGG + chr7_4:57133224-57133243 None:intergenic 65.0%
GAAGGCGAAGGCGAAGGCGA+AGG + chr7_4:57133224-57133243 None:intergenic 65.0%
AAGGCCAGACGTCGCAACGC+GGG - chr7_4:57133443-57133462 Msa1165300:intron 65.0%
AGTTCCCGCGTTGCGACGTC+TGG + chr7_4:57133450-57133469 None:intergenic 65.0%
GTGGAGGATCCGGTGTCCAC+AGG - chr7_4:57133774-57133793 Msa1165300:CDS 65.0%
GAAGGCGAAGGCGAAGGCGG+AGG + chr7_4:57133218-57133237 None:intergenic 70.0%
GGCGAAGGCGAAGGCGAAGG+CGG + chr7_4:57133221-57133240 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 57132613 57137057 57132613 ID=Msa1165300;Name=Msa1165300
chr7_4 mRNA 57132613 57137057 57132613 ID=Msa1165300-mRNA-1;Parent=Msa1165300;Name=Msa1165300-mRNA-1;_AED=0.07;_eAED=0.07;_QI=159|1|1|1|0.8|0.66|6|441|357
chr7_4 exon 57132613 57133283 57132613 ID=Msa1165300-mRNA-1:exon:17203;Parent=Msa1165300-mRNA-1
chr7_4 exon 57133564 57133828 57133564 ID=Msa1165300-mRNA-1:exon:17202;Parent=Msa1165300-mRNA-1
chr7_4 exon 57134760 57134920 57134760 ID=Msa1165300-mRNA-1:exon:17201;Parent=Msa1165300-mRNA-1
chr7_4 exon 57135455 57135643 57135455 ID=Msa1165300-mRNA-1:exon:17200;Parent=Msa1165300-mRNA-1
chr7_4 exon 57136648 57136934 57136648 ID=Msa1165300-mRNA-1:exon:17199;Parent=Msa1165300-mRNA-1
chr7_4 exon 57136957 57137057 57136957 ID=Msa1165300-mRNA-1:exon:17198;Parent=Msa1165300-mRNA-1
chr7_4 five_prime_UTR 57136957 57137057 57136957 ID=Msa1165300-mRNA-1:five_prime_utr;Parent=Msa1165300-mRNA-1
chr7_4 five_prime_UTR 57136877 57136934 57136877 ID=Msa1165300-mRNA-1:five_prime_utr;Parent=Msa1165300-mRNA-1
chr7_4 CDS 57136648 57136876 57136648 ID=Msa1165300-mRNA-1:cds;Parent=Msa1165300-mRNA-1
chr7_4 CDS 57135455 57135643 57135455 ID=Msa1165300-mRNA-1:cds;Parent=Msa1165300-mRNA-1
chr7_4 CDS 57134760 57134920 57134760 ID=Msa1165300-mRNA-1:cds;Parent=Msa1165300-mRNA-1
chr7_4 CDS 57133564 57133828 57133564 ID=Msa1165300-mRNA-1:cds;Parent=Msa1165300-mRNA-1
chr7_4 CDS 57133054 57133283 57133054 ID=Msa1165300-mRNA-1:cds;Parent=Msa1165300-mRNA-1
chr7_4 three_prime_UTR 57132613 57133053 57132613 ID=Msa1165300-mRNA-1:three_prime_utr;Parent=Msa1165300-mRNA-1
Gene Sequence

>Msa1165300

ATGAGTTTTGGCGGTGTGGCATTCTCACTTGTTCTATGGATATCTATGAGTGTTGTTAGTAGTGGATGCAGTAAACCAGCAGTAATATTCATGTTCGGTGATTCGAACTCGGATACGGGTGGACTCGTTTCAGGACTCGGTTTCCCTGTCAATCTTCCTAATGGTCGTACTTTCTTTCACAGATCCACTGGTCGTTTGTCTGATGGACGCCTCGTTATCGACTTTCTCTGCCAAAGTTTGAATACAAGATTTTTGACCCCATACTTGGACTCCATGTCTGGATCCACATTCACAAATGGAGCAAACTTTGCAGTGGTTGGATCCTCTACCCTCCCAAAATATCTTCCTTTCTCTTTAAATATACAGGTCATGCAGTTCCAACATTTCAAAGCTCGTAGCCTTCAGCTTGCTACCTCAGGTGCAAAAAATATGATCAACGACCAAGGCTTCCGGGATGCACTATACTTGATTGATATTGGACAAAATGACCTTGCTGATTCATTTACCAAAAATCTATCATATGTGCAAGTCACCAAGAGGATCCCAACAGTTATCACTGAAATTGAGAATGCTGTTAAGAGTTTGTATAATGAAGGTGGCAGGAAATTTTGGGTTCACAATACCGGGCCCTTTGGCTGTCTTCCTAAATTAATTGCACTGTCTCAAAAGAAGGATCTGGATTCATTTGGATGTCTTTCTAGTTACAATTCTGCTGCTAGATTGTTTAACGAAGCACTTTATCATTCGAGTCAGAAATTAAGAACTGAATTGAAGGATGCTACCTTAGTCTATGTTGATATTTATGCCATTAAGAATGACCTCATCACAAATGCCACCAAATATGGTTTCACAAATCCGCTAATGGTATGCTGCGGCTTTGGAGGGCCACCTTATAATTTCGATGCAAGAGTGACATGCGGTCAACCTGGTTATCAAGTTTGTGATGAAGGATCACGGTATGTGAGTTGGGATGGAATCCATTTTACCGAGGCTGCAAATACATGGATAGCTTCAAAGATACTTTCGACAGCTTATTCCACGCCACACATACCTTTTGGTTTCTTCTGTCACTGA
Protein sequence

>Msa1165300

MSFGGVAFSLVLWISMSVVSSGCSKPAVIFMFGDSNSDTGGLVSGLGFPVNLPNGRTFFHRSTGRLSDGRLVIDFLCQSLNTRFLTPYLDSMSGSTFTNGANFAVVGSSTLPKYLPFSLNIQVMQFQHFKARSLQLATSGAKNMINDQGFRDALYLIDIGQNDLADSFTKNLSYVQVTKRIPTVITEIENAVKSLYNEGGRKFWVHNTGPFGCLPKLIALSQKKDLDSFGCLSSYNSAARLFNEALYHSSQKLRTELKDATLVYVDIYAIKNDLITNATKYGFTNPLMVCCGFGGPPYNFDARVTCGQPGYQVCDEGSRYVSWDGIHFTEAANTWIASKILSTAYSTPHIPFGFFCH*