Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423130 | XP_003601987.1 | 99.608 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1052 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423130 | sp|Q9SSV4|INO1_NICPA | 93.137 | 510 | 35 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1001 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423130 | G7J4B5 | 99.608 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1052 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374140 | Msa0423130 | 0.836094 | 1.144291e-56 | -8.615850e-47 |
| Msa0423130 | Msa0469560 | 0.934896 | 1.981569e-96 | -8.615850e-47 |
| Msa0423130 | Msa0480250 | 0.801515 | 8.684232e-49 | -8.615850e-47 |
| Msa0423130 | Msa0515270 | 0.871942 | 4.650750e-67 | -8.615850e-47 |
| Msa0423130 | Msa0556520 | -0.802986 | 4.324562e-49 | -8.615850e-47 |
| Msa0423130 | Msa0652050 | -0.811403 | 7.125750e-51 | -8.615850e-47 |
| Msa0423130 | Msa0689940 | 0.804880 | 1.746871e-49 | -8.615850e-47 |
| Msa0423130 | Msa0837930 | 0.814376 | 1.589863e-51 | -8.615850e-47 |
| Msa0423130 | Msa1130820 | 0.843874 | 1.071292e-58 | -8.615850e-47 |
| Msa0423130 | Msa1212190 | -0.810782 | 9.714402e-51 | -8.615850e-47 |
| Msa0423130 | Msa1212270 | -0.818906 | 1.534535e-52 | -8.615850e-47 |
| Msa0423130 | Msa1259910 | -0.818066 | 2.379005e-52 | -8.615850e-47 |
| Msa0423130 | Msa1406670 | 0.842465 | 2.544158e-58 | -8.615850e-47 |
| Msa0423130 | Msa1448870 | 0.843685 | 1.203585e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423130 | MtrunA17_Chr3g0124321 | 99.608 | 510 | 2 | 0 | 1 | 510 | 1 | 510 | 0.0 | 1052 |
| Msa0423130 | MtrunA17_Chr8g0382621 | 91.373 | 510 | 44 | 0 | 1 | 510 | 1 | 510 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0423130 | AT2G22240.1 | 88.431 | 510 | 59 | 0 | 1 | 510 | 1 | 510 | 0.0 | 963 |
| Msa0423130 | AT5G10170.1 | 88.235 | 510 | 60 | 0 | 1 | 510 | 1 | 510 | 0.0 | 960 |
| Msa0423130 | AT4G39800.1 | 88.845 | 511 | 56 | 1 | 1 | 510 | 1 | 511 | 0.0 | 959 |
| Msa0423130 | AT2G22240.3 | 87.778 | 450 | 55 | 0 | 1 | 450 | 1 | 450 | 0.0 | 843 |
| Msa0423130 | AT2G22240.2 | 88.684 | 380 | 43 | 0 | 131 | 510 | 1 | 380 | 0.0 | 718 |
Find 152 sgRNAs with CRISPR-Local
Find 246 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATATTCATGTCCCTAAAT+TGG | 0.139724 | 3_2:-72876362 | Msa0423130:CDS |
| TAGGATACTAACCCCAATTT+AGG | 0.157622 | 3_2:+72876349 | None:intergenic |
| ACATGAATTCAGGGAATTTA+AGG | 0.214114 | 3_2:-72875145 | Msa0423130:intron |
| CACCAAAACAGATTTCATTT+TGG | 0.237842 | 3_2:+72874753 | None:intergenic |
| TAGGGTAATGCTTGTGGGCT+GGG | 0.247084 | 3_2:-72876247 | Msa0423130:CDS |
| AGTCAAGGATCCAAAGTAAT+TGG | 0.258694 | 3_2:+72876050 | None:intergenic |
| TTTGGCTGCTCCTATTATCT+TGG | 0.260165 | 3_2:-72874163 | Msa0423130:CDS |
| GTGTTTATTGCTTTACCTTA+TGG | 0.265874 | 3_2:-72872943 | Msa0423130:three_prime_UTR |
| GACCAAAATGAAATCTGTTT+TGG | 0.315009 | 3_2:-72874755 | Msa0423130:CDS |
| AGAACCAAGTCCAAGATAAT+AGG | 0.315065 | 3_2:+72874153 | None:intergenic |
| ACTTAATGTCTTTGATGATT+TGG | 0.316276 | 3_2:+72875260 | None:intergenic |
| GTTTGCCATTGCTTGTGTTA+TGG | 0.321854 | 3_2:-72874977 | Msa0423130:CDS |
| GGCTTGTTGAATCTTATCTT+TGG | 0.324221 | 3_2:+72876071 | None:intergenic |
| GATATTCATGTCCCTAAATT+GGG | 0.324625 | 3_2:-72876361 | Msa0423130:CDS |
| TTAGGGTAATGCTTGTGGGC+TGG | 0.326783 | 3_2:-72876248 | Msa0423130:intron |
| AAAAGGAAAATAAAATAAAA+AGG | 0.327687 | 3_2:+72873089 | None:intergenic |
| TGATCATGTTGTAGTCATTA+AGG | 0.330877 | 3_2:-72874381 | Msa0423130:intron |
| CACATGTGAGGACTCCCTTT+TGG | 0.337114 | 3_2:-72874181 | Msa0423130:CDS |
| TGCTCCTATTATCTTGGACT+TGG | 0.337540 | 3_2:-72874157 | Msa0423130:CDS |
| AATCAAACAGTTGTTCTTGA+TGG | 0.339221 | 3_2:+72874804 | None:intergenic |
| CAATTTAGGGACATGAATAT+CGG | 0.345716 | 3_2:+72876363 | None:intergenic |
| TTCTGTCCACAGCAGCAAAA+AGG | 0.352039 | 3_2:+72875028 | None:intergenic |
| TTTATCTATTTGTGCTCAAT+TGG | 0.354707 | 3_2:-72872965 | Msa0423130:three_prime_UTR |
| GAGGCAAGACCAATATAATA+TGG | 0.363257 | 3_2:-72872911 | None:intergenic |
| AGGATACTAACCCCAATTTA+GGG | 0.368499 | 3_2:+72876350 | None:intergenic |
| GGTTCTATACCATATTATAT+TGG | 0.377003 | 3_2:+72872902 | None:intergenic |
| CTGATGCCATGGCTAGGGCC+AGG | 0.381997 | 3_2:-72875432 | Msa0423130:CDS |
| ATTCAACAAGCCAATTACTT+TGG | 0.386610 | 3_2:-72876060 | Msa0423130:CDS |
| TCCTTGGAGCGGAAGGTTTG+TGG | 0.393131 | 3_2:+72874476 | None:intergenic |
| CCTTGGAGCGGAAGGTTTGT+GGG | 0.393231 | 3_2:+72874477 | None:intergenic |
| GAATCCATGGTTCCACTTCC+CGG | 0.397208 | 3_2:-72875367 | Msa0423130:CDS |
| GTGGATTTCCTTGTAGGAGC+TGG | 0.403897 | 3_2:-72874733 | Msa0423130:CDS |
| ATTGCTCTTGGAAATTTCCT+TGG | 0.409417 | 3_2:+72874460 | None:intergenic |
| TTATCTGACCAAGGCTCCTC+TGG | 0.410514 | 3_2:-72873398 | Msa0423130:intron |
| GAGAATGTTCCTTTCATCAA+TGG | 0.416258 | 3_2:-72874955 | Msa0423130:CDS |
| TAACACAAGCAATGGCAAAC+AGG | 0.418453 | 3_2:+72874980 | None:intergenic |
| AAACTAGAAAGTTCTAACTA+TGG | 0.420585 | 3_2:+72873140 | None:intergenic |
| GTCAAAGCAGCGAGCAATGC+TGG | 0.421080 | 3_2:-72873242 | Msa0423130:CDS |
| TCTAGGATCATGTTGTTCTC+TGG | 0.422099 | 3_2:+72873187 | None:intergenic |
| AGAAGAAGAAAGAAATGAAA+AGG | 0.428286 | 3_2:+72876586 | None:intergenic |
| GATTTCATTGCTGCTAATCA+AGG | 0.434233 | 3_2:-72875331 | Msa0423130:CDS |
| ATCGTCAACAACATTGCTCT+TGG | 0.434279 | 3_2:+72874448 | None:intergenic |
| GAGCAATGTTGTTGACGATA+TGG | 0.436350 | 3_2:-72874444 | Msa0423130:CDS |
| GAGCATGAATTTCCTCTCCT+TGG | 0.438687 | 3_2:+72875998 | None:intergenic |
| AAGCCCTGCTCTAAAGTACT+TGG | 0.447659 | 3_2:+72873020 | None:intergenic |
| TTGTTGAATCTTATCTTTGG+TGG | 0.450721 | 3_2:+72876074 | None:intergenic |
| CCCTGCTTCACTTGTACTCT+AGG | 0.451998 | 3_2:+72873170 | None:intergenic |
| TGATTAGCAGCAATGAAATC+CGG | 0.452153 | 3_2:+72875334 | None:intergenic |
| ATCAAGAACAACTGTTTGAT+TGG | 0.452379 | 3_2:-72874802 | Msa0423130:CDS |
| TAACTGAGGATGGTAGCAAC+AGG | 0.452446 | 3_2:+72873418 | None:intergenic |
| TTTGTTAGGGTAATGCTTGT+GGG | 0.455984 | 3_2:-72876252 | Msa0423130:intron |
| TTGATTTGCAAAAGCAATTG+AGG | 0.457030 | 3_2:-72875399 | Msa0423130:CDS |
| AGATAATAGGAGCAGCCAAA+AGG | 0.457683 | 3_2:+72874166 | None:intergenic |
| GCTCCCAAGTACTTTAGAGC+AGG | 0.457698 | 3_2:-72873024 | Msa0423130:three_prime_UTR |
| AGGTACAGTAACTTAGTTGT+AGG | 0.460941 | 3_2:-72875072 | Msa0423130:CDS |
| TTAATGACTACAACATGATC+AGG | 0.467562 | 3_2:+72874383 | None:intergenic |
| AGGGTAATGCTTGTGGGCTG+GGG | 0.467936 | 3_2:-72876246 | Msa0423130:CDS |
| GAAATCCGGGTCATAGATAC+CGG | 0.470564 | 3_2:+72875348 | None:intergenic |
| TCCTAGAGTACAAGTGAAGC+AGG | 0.475562 | 3_2:-72873171 | Msa0423130:exon |
| GATTCAGTGTACTTAACATT+GGG | 0.477319 | 3_2:+72876496 | None:intergenic |
| GGTGGTTTCGTAATTGTAAA+CGG | 0.478186 | 3_2:+72876462 | None:intergenic |
| GTAATGCTTGTGGGCTGGGG+TGG | 0.481711 | 3_2:-72876243 | Msa0423130:CDS |
| ATTATACGTGCAGGTTCCAC+CGG | 0.482882 | 3_2:-72873287 | Msa0423130:intron |
| GGAACCATGGATTCCATGTA+AGG | 0.483038 | 3_2:+72875376 | None:intergenic |
| GATAATAGGAGCAGCCAAAA+GGG | 0.486125 | 3_2:+72874167 | None:intergenic |
| ACGTGCAAATAACGTTATCA+AGG | 0.491091 | 3_2:-72875305 | Msa0423130:CDS |
| AGGAAGCAAACAAAGTGGAC+AGG | 0.493386 | 3_2:-72875125 | Msa0423130:CDS |
| TGATGCCATGGCTAGGGCCA+GGG | 0.493673 | 3_2:-72875431 | Msa0423130:CDS |
| AAGAGGAAAGAAAAGAATGA+AGG | 0.500444 | 3_2:+72876556 | None:intergenic |
| GGAAATTTCCTTGGAGCGGA+AGG | 0.501533 | 3_2:+72874469 | None:intergenic |
| AAATATTTACCATTGGAAGA+AGG | 0.501662 | 3_2:+72875965 | None:intergenic |
| CAAGCTTCAGCTATTCGAGT+TGG | 0.504429 | 3_2:-72876027 | Msa0423130:CDS |
| CCTTGTAGGAGCTGGTATCA+AGG | 0.505836 | 3_2:-72874725 | Msa0423130:intron |
| AAAGCAATTGAGGCCTTACA+TGG | 0.505909 | 3_2:-72875389 | Msa0423130:CDS |
| ATAGTGAGTTACAATCATCT+TGG | 0.506560 | 3_2:-72874527 | Msa0423130:CDS |
| AGCAATAACACCACCGGTAA+GGG | 0.507926 | 3_2:+72876206 | None:intergenic |
| CTCTTGCTGTCACCAACATA+AGG | 0.508453 | 3_2:+72874267 | None:intergenic |
| ATTTGTTAGGGTAATGCTTG+TGG | 0.509057 | 3_2:-72876253 | Msa0423130:intron |
| TTTCAAGAGCCTTCTTCCAA+TGG | 0.511249 | 3_2:-72875974 | Msa0423130:intron |
| CATGAGAGCTTGTGTTGGAT+TGG | 0.511914 | 3_2:-72873212 | Msa0423130:CDS |
| AACAACGGTTCAACCCTTAC+CGG | 0.512660 | 3_2:-72876219 | Msa0423130:CDS |
| CTTGTTCATGAAAATCGTAA+TGG | 0.514368 | 3_2:-72876436 | Msa0423130:CDS |
| TGCCTCTTAAAACTACCATA+AGG | 0.515668 | 3_2:+72872928 | None:intergenic |
| TTGCAGTATGTGCCTTATGT+TGG | 0.518481 | 3_2:-72874279 | Msa0423130:intron |
| AGATTCAGTGTACTTAACAT+TGG | 0.521108 | 3_2:+72876495 | None:intergenic |
| TTTGACAATGCATTCACCAC+TGG | 0.524218 | 3_2:+72873259 | None:intergenic |
| CCTTGATACCAGCTCCTACA+AGG | 0.526501 | 3_2:+72874725 | None:intergenic |
| TTAACGCACCAGAGGAGCCT+TGG | 0.528664 | 3_2:+72873390 | None:intergenic |
| TAGCAATAACACCACCGGTA+AGG | 0.532037 | 3_2:+72876205 | None:intergenic |
| CTCCCAAGTACTTTAGAGCA+GGG | 0.534261 | 3_2:-72873023 | Msa0423130:three_prime_UTR |
| AATCATCTTGGAAACAATGA+TGG | 0.537294 | 3_2:-72874515 | Msa0423130:CDS |
| GGGTCATAGATACCGGGAAG+TGG | 0.539794 | 3_2:+72875355 | None:intergenic |
| ACATGATCAGGATGTTCGCC+AGG | 0.540181 | 3_2:+72874395 | None:intergenic |
| GCATTCACCACTGGTGTGCC+CGG | 0.540361 | 3_2:+72873268 | None:intergenic |
| TGGACAGGGTTGTTGTACTC+TGG | 0.548164 | 3_2:-72875110 | Msa0423130:CDS |
| CCTTGCTGATGCCATGGCTA+GGG | 0.551502 | 3_2:-72875437 | Msa0423130:CDS |
| GATGGTAGCAACAGGGTGAA+AGG | 0.552503 | 3_2:+72873426 | None:intergenic |
| GAGGCCTTACATGGAATCCA+TGG | 0.553960 | 3_2:-72875380 | Msa0423130:CDS |
| GAAAACATCAGCAAACCAAA+AGG | 0.554028 | 3_2:+72873072 | None:intergenic |
| ATTCGAGTTGGATCTTTCCA+AGG | 0.554359 | 3_2:-72876015 | Msa0423130:CDS |
| AACATCATGAGAGCTTGTGT+TGG | 0.560655 | 3_2:-72873217 | Msa0423130:CDS |
| CCCACAAACCTTCCGCTCCA+AGG | 0.565550 | 3_2:-72874477 | Msa0423130:CDS |
| AGTTGGATCTTTCCAAGGAG+AGG | 0.567879 | 3_2:-72876010 | Msa0423130:CDS |
| TGAGGACTTCCATTGATGAA+AGG | 0.570861 | 3_2:+72874946 | None:intergenic |
| ACCTTGCTGATGCCATGGCT+AGG | 0.571457 | 3_2:-72875438 | Msa0423130:CDS |
| GTTACTGTACCTCTCTGTGT+TGG | 0.574857 | 3_2:+72875083 | None:intergenic |
| CTTGGAGCGGAAGGTTTGTG+GGG | 0.577089 | 3_2:+72874478 | None:intergenic |
| CATGAACCTTGCTGATGCCA+TGG | 0.578935 | 3_2:-72875443 | Msa0423130:CDS |
| AACACAAGCAATGGCAAACA+GGG | 0.579935 | 3_2:+72874981 | None:intergenic |
| TCAGTTTAAATCTGAAGCTG+AGG | 0.583789 | 3_2:-72874106 | Msa0423130:intron |
| GCAATGGCAAACAGGGTGGA+AGG | 0.586236 | 3_2:+72874988 | None:intergenic |
| GATTAGCAGCAATGAAATCC+GGG | 0.589255 | 3_2:+72875335 | None:intergenic |
| ATTGGAAGAAGGCTCTTGAA+AGG | 0.589300 | 3_2:+72875976 | None:intergenic |
| ATCGTAATGGCACTTATCAG+TGG | 0.589528 | 3_2:-72876423 | Msa0423130:CDS |
| GTGGGCTGGGGTGGAAACAA+CGG | 0.593220 | 3_2:-72876234 | Msa0423130:CDS |
| TTGTAACTCACTATTGATGT+TGG | 0.597352 | 3_2:+72874536 | None:intergenic |
| ACTTCCCGGTATCTATGACC+CGG | 0.600843 | 3_2:-72875353 | Msa0423130:CDS |
| TGGTGACAGCAAGAGAGCTA+TGG | 0.602579 | 3_2:-72874259 | Msa0423130:CDS |
| ATTCTCCATAACACAAGCAA+TGG | 0.605875 | 3_2:+72874972 | None:intergenic |
| CCCTAGCCATGGCATCAGCA+AGG | 0.607382 | 3_2:+72875437 | None:intergenic |
| AGCCCTGCTCTAAAGTACTT+GGG | 0.608027 | 3_2:+72873021 | None:intergenic |
| AAGAACAACTGTTTGATTGG+TGG | 0.609331 | 3_2:-72874799 | Msa0423130:CDS |
| TTCGCCAGGTGCATAGAGGA+TGG | 0.609515 | 3_2:+72874409 | None:intergenic |
| AATGCCATCCTCTATGCACC+TGG | 0.609865 | 3_2:-72874413 | Msa0423130:CDS |
| ATATTCATGTCCCTAAATTG+GGG | 0.612827 | 3_2:-72876360 | Msa0423130:intron |
| CCTAGAGTACAAGTGAAGCA+GGG | 0.613737 | 3_2:-72873170 | Msa0423130:exon |
| GGAAGGTTTGTGGGGCTGAG+AGG | 0.615482 | 3_2:+72874486 | None:intergenic |
| GGTTCCACCGGGCACACCAG+TGG | 0.615777 | 3_2:-72873275 | Msa0423130:CDS |
| CGTGCAAATAACGTTATCAA+GGG | 0.615803 | 3_2:-72875304 | Msa0423130:CDS |
| TTATACGTGCAGGTTCCACC+GGG | 0.621923 | 3_2:-72873286 | Msa0423130:intron |
| CTTGGTCAGATAACTGAGGA+TGG | 0.622462 | 3_2:+72873408 | None:intergenic |
| CCTGGAACAAAAGTGTTCTG+AGG | 0.628658 | 3_2:+72874928 | None:intergenic |
| TCTTGGAAATTTCCTTGGAG+CGG | 0.633995 | 3_2:+72874465 | None:intergenic |
| AATAGCTGAAGCTTGAGTCA+AGG | 0.634507 | 3_2:+72876035 | None:intergenic |
| TTCACCACTGGTGTGCCCGG+TGG | 0.637974 | 3_2:+72873271 | None:intergenic |
| GGAAGCAAACAAAGTGGACA+GGG | 0.639443 | 3_2:-72875124 | Msa0423130:CDS |
| GGTGGTGATGATTTCAAGAG+TGG | 0.641949 | 3_2:-72874781 | Msa0423130:CDS |
| CTAGAGTACAAGTGAAGCAG+GGG | 0.649378 | 3_2:-72873169 | Msa0423130:exon |
| TCTGTTAGCAATAACACCAC+CGG | 0.649419 | 3_2:+72876200 | None:intergenic |
| AGCTATGGATGAGTACACTT+CGG | 0.651582 | 3_2:-72874244 | Msa0423130:CDS |
| ATTTAAGGAAGCAAACAAAG+TGG | 0.652703 | 3_2:-72875130 | Msa0423130:CDS |
| CATCCTCAGTTATCTGACCA+AGG | 0.657948 | 3_2:-72873407 | Msa0423130:CDS |
| AACGGTTCAACCCTTACCGG+TGG | 0.661685 | 3_2:-72876216 | Msa0423130:CDS |
| AACTGAGGATGGTAGCAACA+GGG | 0.662195 | 3_2:+72873419 | None:intergenic |
| GATACCGGGAAGTGGAACCA+TGG | 0.668036 | 3_2:+72875363 | None:intergenic |
| GATGTTCGCCAGGTGCATAG+AGG | 0.676178 | 3_2:+72874405 | None:intergenic |
| AAATCCGGGTCATAGATACC+GGG | 0.679094 | 3_2:+72875349 | None:intergenic |
| ACAAGCAATGGCAAACAGGG+TGG | 0.679241 | 3_2:+72874984 | None:intergenic |
| TCTGGACTGCCAACACAGAG+AGG | 0.697710 | 3_2:-72875092 | Msa0423130:CDS |
| TGTAGGACTCAATGACACCA+TGG | 0.702021 | 3_2:-72875055 | Msa0423130:CDS |
| GAGCCTTGGTCAGATAACTG+AGG | 0.725753 | 3_2:+72873404 | None:intergenic |
| TGTGTTGCACAACACATGTG+AGG | 0.753320 | 3_2:-72874193 | Msa0423130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTATTTTTTAAAAATAAAA+TGG | - | chr3_2:72873970-72873989 | Msa0423130:intron | 0.0% |
| !! | CTGATTTATTTATTATTTAT+TGG | - | chr3_2:72873267-72873286 | Msa0423130:CDS | 10.0% |
| !!! | TTTTTATTAATTGTGATTAA+TGG | - | chr3_2:72873397-72873416 | Msa0423130:intron | 10.0% |
| !!! | TTTTATTAATTGTGATTAAT+GGG | - | chr3_2:72873398-72873417 | Msa0423130:intron | 10.0% |
| !! | AAAAATCAATTAAAACAAAA+GGG | + | chr3_2:72873615-72873634 | None:intergenic | 10.0% |
| !! | AAAAAATCAATTAAAACAAA+AGG | + | chr3_2:72873616-72873635 | None:intergenic | 10.0% |
| !! | AAAAGGAAAATAAAATAAAA+AGG | + | chr3_2:72876461-72876480 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTATTTTCCTTT+TGG | - | chr3_2:72876460-72876479 | Msa0423130:CDS | 10.0% |
| !!! | AATTCATATTTAACAGTTTT+AGG | + | chr3_2:72873159-72873178 | None:intergenic | 15.0% |
| !!! | TAATTTTGATTATGATTTTC+AGG | - | chr3_2:72873437-72873456 | Msa0423130:CDS | 15.0% |
| !!! | AATTTTGATTATGATTTTCA+GGG | - | chr3_2:72873438-72873457 | Msa0423130:CDS | 15.0% |
| !! | AAAATCAATTAAAACAAAAG+GGG | + | chr3_2:72873614-72873633 | None:intergenic | 15.0% |
| !!! | ATGTAGTTTTTCTATTTTTT+TGG | - | chr3_2:72873681-72873700 | Msa0423130:intron | 15.0% |
| !! | TTAACTTCATAAATAATACA+AGG | + | chr3_2:72876068-72876087 | None:intergenic | 15.0% |
| !! | GAAAGATTATGAATGAAATT+AGG | + | chr3_2:72873220-72873239 | None:intergenic | 20.0% |
| !!! | ATTTATTGGTTTGATTTGTT+AGG | - | chr3_2:72873281-72873300 | Msa0423130:intron | 20.0% |
| !!! | TTTATTGGTTTGATTTGTTA+GGG | - | chr3_2:72873282-72873301 | Msa0423130:intron | 20.0% |
| !!! | ATTTTGATTATGATTTTCAG+GGG | - | chr3_2:72873439-72873458 | Msa0423130:CDS | 20.0% |
| !! | GTTTAAGAAATATTTACCAT+TGG | + | chr3_2:72873592-72873611 | None:intergenic | 20.0% |
| !!! | TTTTCTATTTTTTTGGTTCA+AGG | - | chr3_2:72873688-72873707 | Msa0423130:intron | 20.0% |
| !! | TTAAATTGAATACGACTAAT+AGG | - | chr3_2:72873799-72873818 | Msa0423130:intron | 20.0% |
| !!! | ACTTTTCTTTTATTATCATC+AGG | - | chr3_2:72874706-72874725 | Msa0423130:intron | 20.0% |
| !!! | CTTTTCTTTTATTATCATCA+GGG | - | chr3_2:72874707-72874726 | Msa0423130:intron | 20.0% |
| !!! | TTTAATTTTGCAACAAGAAA+AGG | - | chr3_2:72874959-72874978 | Msa0423130:CDS | 20.0% |
| !! | ATTTGATACAAAGATTGTAA+TGG | + | chr3_2:72875608-72875627 | None:intergenic | 20.0% |
| !! | GAATTATAGTATTAAGGAAA+CGG | + | chr3_2:72875674-72875693 | None:intergenic | 20.0% |
| !!! | TAAAGCATTAAAGCTTTTTT+TGG | - | chr3_2:72875775-72875794 | Msa0423130:intron | 20.0% |
| !! | TGATTATGAACAATAACAAA+TGG | + | chr3_2:72875817-72875836 | None:intergenic | 20.0% |
| !! | TATTATATTATTATACGTGC+AGG | - | chr3_2:72876251-72876270 | Msa0423130:intron | 20.0% |
| ! | AGAAGAAGAAAGAAATGAAA+AGG | + | chr3_2:72872964-72872983 | None:intergenic | 25.0% |
| !! | GTGATTAATGGGAAATTTTA+TGG | - | chr3_2:72873409-72873428 | Msa0423130:CDS | 25.0% |
| ! | AAATATTTACCATTGGAAGA+AGG | + | chr3_2:72873585-72873604 | None:intergenic | 25.0% |
| !! | ACTTAATGTCTTTGATGATT+TGG | + | chr3_2:72874290-72874309 | None:intergenic | 25.0% |
| ! | ATATTAATCTACATGCTTCA+TGG | - | chr3_2:72874317-72874336 | Msa0423130:intron | 25.0% |
| !! | ATATTCAGCAAATTTTAAGC+TGG | + | chr3_2:72874370-72874389 | None:intergenic | 25.0% |
| !! | TTATATACTGTAACCTTTTC+AGG | - | chr3_2:72875220-72875239 | Msa0423130:intron | 25.0% |
| !! | TTCTTTTGCAACATAAACTA+GGG | + | chr3_2:72875480-72875499 | None:intergenic | 25.0% |
| !! | AATTCATTGATAACAATCTC+TGG | + | chr3_2:72875529-72875548 | None:intergenic | 25.0% |
| ! | CAGATGGAATTATAGTATTA+AGG | + | chr3_2:72875680-72875699 | None:intergenic | 25.0% |
| ! | TTAATGAACTTATGTTGTGA+AGG | + | chr3_2:72875852-72875871 | None:intergenic | 25.0% |
| ! | TTATGAAGTTAACTATGTTG+TGG | - | chr3_2:72876076-72876095 | Msa0423130:CDS | 25.0% |
| !! | AAACTAGAAAGTTCTAACTA+TGG | + | chr3_2:72876410-72876429 | None:intergenic | 25.0% |
| ! | TTTATCTATTTGTGCTCAAT+TGG | - | chr3_2:72876582-72876601 | Msa0423130:five_prime_UTR | 25.0% |
| AAGAGGAAAGAAAAGAATGA+AGG | + | chr3_2:72872994-72873013 | None:intergenic | 30.0% | |
| ! | CGATAAACATTTTTGTGAAG+AGG | + | chr3_2:72873011-72873030 | None:intergenic | 30.0% |
| GATTCAGTGTACTTAACATT+GGG | + | chr3_2:72873054-72873073 | None:intergenic | 30.0% | |
| AGATTCAGTGTACTTAACAT+TGG | + | chr3_2:72873055-72873074 | None:intergenic | 30.0% | |
| ! | ACGATTTTCATGAACAAGTT+CGG | + | chr3_2:72873109-72873128 | None:intergenic | 30.0% |
| CTTGTTCATGAAAATCGTAA+TGG | - | chr3_2:72873111-72873130 | Msa0423130:three_prime_UTR | 30.0% | |
| CAATTTAGGGACATGAATAT+CGG | + | chr3_2:72873187-72873206 | None:intergenic | 30.0% | |
| GATATTCATGTCCCTAAATT+GGG | - | chr3_2:72873186-72873205 | Msa0423130:CDS | 30.0% | |
| ATATTCATGTCCCTAAATTG+GGG | - | chr3_2:72873187-72873206 | Msa0423130:CDS | 30.0% | |
| TTGTTGAATCTTATCTTTGG+TGG | + | chr3_2:72873476-72873495 | None:intergenic | 30.0% | |
| ATTCAACAAGCCAATTACTT+TGG | - | chr3_2:72873487-72873506 | Msa0423130:intron | 30.0% | |
| ATTTAATATGTGACATGCAG+TGG | + | chr3_2:72873785-72873804 | None:intergenic | 30.0% | |
| ATTTCAACAGGTCTAATTTG+AGG | - | chr3_2:72873822-72873841 | Msa0423130:intron | 30.0% | |
| ATCAGTTTAAGCATGCTATA+AGG | - | chr3_2:72873903-72873922 | Msa0423130:intron | 30.0% | |
| AAATAAAATGGAGTCCAAGA+TGG | - | chr3_2:72873982-72874001 | Msa0423130:intron | 30.0% | |
| TTCGTTGAAAAACTATATGC+AGG | - | chr3_2:72874038-72874057 | Msa0423130:intron | 30.0% | |
| !! | TTGATTTGCAAAAGCAATTG+AGG | - | chr3_2:72874148-72874167 | Msa0423130:CDS | 30.0% |
| ACATGAATTCAGGGAATTTA+AGG | - | chr3_2:72874402-72874421 | Msa0423130:CDS | 30.0% | |
| ATTTAAGGAAGCAAACAAAG+TGG | - | chr3_2:72874417-72874436 | Msa0423130:CDS | 30.0% | |
| ATAAAGAGAAGAAACAAACC+TGG | + | chr3_2:72874640-72874659 | None:intergenic | 30.0% | |
| AATCAAGTGACAGATTTAGA+GGG | + | chr3_2:72874666-72874685 | None:intergenic | 30.0% | |
| TAATCAAGTGACAGATTTAG+AGG | + | chr3_2:72874667-72874686 | None:intergenic | 30.0% | |
| AATCAAACAGTTGTTCTTGA+TGG | + | chr3_2:72874746-72874765 | None:intergenic | 30.0% | |
| ATCAAGAACAACTGTTTGAT+TGG | - | chr3_2:72874745-72874764 | Msa0423130:CDS | 30.0% | |
| ! | GACCAAAATGAAATCTGTTT+TGG | - | chr3_2:72874792-72874811 | Msa0423130:CDS | 30.0% |
| ! | CACCAAAACAGATTTCATTT+TGG | + | chr3_2:72874797-72874816 | None:intergenic | 30.0% |
| !! | CAAAATGAAATCTGTTTTGG+TGG | - | chr3_2:72874795-72874814 | Msa0423130:CDS | 30.0% |
| TTGTAACTCACTATTGATGT+TGG | + | chr3_2:72875014-72875033 | None:intergenic | 30.0% | |
| ATAGTGAGTTACAATCATCT+TGG | - | chr3_2:72875020-72875039 | Msa0423130:CDS | 30.0% | |
| AATCATCTTGGAAACAATGA+TGG | - | chr3_2:72875032-72875051 | Msa0423130:CDS | 30.0% | |
| TTAATGACTACAACATGATC+AGG | + | chr3_2:72875167-72875186 | None:intergenic | 30.0% | |
| TGATCATGTTGTAGTCATTA+AGG | - | chr3_2:72875166-72875185 | Msa0423130:intron | 30.0% | |
| ! | TACACTTCGGAAATTTTCAT+GGG | - | chr3_2:72875316-72875335 | Msa0423130:CDS | 30.0% |
| ! | GTTCTTTTGCAACATAAACT+AGG | + | chr3_2:72875481-72875500 | None:intergenic | 30.0% |
| ! | GTTGCTCTGAATTAATGTTT+AGG | - | chr3_2:72875895-72875914 | Msa0423130:intron | 30.0% |
| AAAATGACACGAAATGCAAA+TGG | + | chr3_2:72876003-72876022 | None:intergenic | 30.0% | |
| GTGTTTATTGCTTTACCTTA+TGG | - | chr3_2:72876604-72876623 | Msa0423130:five_prime_UTR | 30.0% | |
| !!! | TACCTTATGGTAGTTTTAAG+AGG | - | chr3_2:72876617-72876636 | Msa0423130:five_prime_UTR | 30.0% |
| GGTGGTTTCGTAATTGTAAA+CGG | + | chr3_2:72873088-72873107 | None:intergenic | 35.0% | |
| ! | ATTTTCATGAACAAGTTCGG+TGG | + | chr3_2:72873106-72873125 | None:intergenic | 35.0% |
| CGATATTCATGTCCCTAAAT+TGG | - | chr3_2:72873185-72873204 | Msa0423130:CDS | 35.0% | |
| AGGATACTAACCCCAATTTA+GGG | + | chr3_2:72873200-72873219 | None:intergenic | 35.0% | |
| TAGGATACTAACCCCAATTT+AGG | + | chr3_2:72873201-72873220 | None:intergenic | 35.0% | |
| ! | ATTTGTTAGGGTAATGCTTG+TGG | - | chr3_2:72873294-72873313 | Msa0423130:intron | 35.0% |
| TTTGTTAGGGTAATGCTTGT+GGG | - | chr3_2:72873295-72873314 | Msa0423130:intron | 35.0% | |
| !!! | TGATTTTCAGGGGTATTTCA+TGG | - | chr3_2:72873449-72873468 | Msa0423130:intron | 35.0% |
| !!! | GATTTTCAGGGGTATTTCAT+GGG | - | chr3_2:72873450-72873469 | Msa0423130:intron | 35.0% |
| !! | GGCTTGTTGAATCTTATCTT+TGG | + | chr3_2:72873479-72873498 | None:intergenic | 35.0% |
| AGTCAAGGATCCAAAGTAAT+TGG | + | chr3_2:72873500-72873519 | None:intergenic | 35.0% | |
| ACGACTAATAGGATTTCAAC+AGG | - | chr3_2:72873810-72873829 | Msa0423130:intron | 35.0% | |
| ATCCTTAACTCAAACCATCT+TGG | + | chr3_2:72873999-72874018 | None:intergenic | 35.0% | |
| ! | AACCCTGATGACATTGTTTT+TGG | - | chr3_2:72874063-72874082 | Msa0423130:intron | 35.0% |
| CACCAAAAACAATGTCATCA+GGG | + | chr3_2:72874068-72874087 | None:intergenic | 35.0% | |
| !!! | ATGACATTGTTTTTGGTGGA+TGG | - | chr3_2:72874070-72874089 | Msa0423130:intron | 35.0% |
| !!! | TGACATTGTTTTTGGTGGAT+GGG | - | chr3_2:72874071-72874090 | Msa0423130:intron | 35.0% |
| CAAATCAATGTCAAAAACCC+TGG | + | chr3_2:72874136-72874155 | None:intergenic | 35.0% | |
| TGATTAGCAGCAATGAAATC+CGG | + | chr3_2:72874216-72874235 | None:intergenic | 35.0% | |
| GATTTCATTGCTGCTAATCA+AGG | - | chr3_2:72874216-72874235 | Msa0423130:CDS | 35.0% | |
| ACGTGCAAATAACGTTATCA+AGG | - | chr3_2:72874242-72874261 | Msa0423130:CDS | 35.0% | |
| CGTGCAAATAACGTTATCAA+GGG | - | chr3_2:72874243-72874262 | Msa0423130:CDS | 35.0% | |
| TCCTATGTTGACATGAATTC+AGG | - | chr3_2:72874392-72874411 | Msa0423130:CDS | 35.0% | |
| CCTATGTTGACATGAATTCA+GGG | - | chr3_2:72874393-72874412 | Msa0423130:CDS | 35.0% | |
| AGGTACAGTAACTTAGTTGT+AGG | - | chr3_2:72874475-72874494 | Msa0423130:CDS | 35.0% | |
| ATTCTCCATAACACAAGCAA+TGG | + | chr3_2:72874578-72874597 | None:intergenic | 35.0% | |
| GAGAATGTTCCTTTCATCAA+TGG | - | chr3_2:72874592-72874611 | Msa0423130:intron | 35.0% | |
| AAGAACAACTGTTTGATTGG+TGG | - | chr3_2:72874748-72874767 | Msa0423130:CDS | 35.0% | |
| ATTGCTCTTGGAAATTTCCT+TGG | + | chr3_2:72875090-72875109 | None:intergenic | 35.0% | |
| GAAGAGTAAAAGACCTGAAA+AGG | + | chr3_2:72875236-72875255 | None:intergenic | 35.0% | |
| ! | AGGTCTTTTACTCTTCACTT+TGG | - | chr3_2:72875240-72875259 | Msa0423130:intron | 35.0% |
| ! | GTACACTTCGGAAATTTTCA+TGG | - | chr3_2:72875315-72875334 | Msa0423130:CDS | 35.0% |
| AGAACCAAGTCCAAGATAAT+AGG | + | chr3_2:72875397-72875416 | None:intergenic | 35.0% | |
| ! | TCAGTTTAAATCTGAAGCTG+AGG | - | chr3_2:72875441-72875460 | Msa0423130:CDS | 35.0% |
| AATCAAAGAACTCTCGTTTC+AGG | + | chr3_2:72875579-72875598 | None:intergenic | 35.0% | |
| TTGCATGTCATTGTGTAACT+TGG | + | chr3_2:72875747-72875766 | None:intergenic | 35.0% | |
| !! | ATAATCATGCAGCTTTAGGA+AGG | + | chr3_2:72875875-72875894 | None:intergenic | 35.0% |
| CAACATAATCATGCAGCTTT+AGG | + | chr3_2:72875879-72875898 | None:intergenic | 35.0% | |
| TCAGTTTCAAGAGACAAATC+CGG | - | chr3_2:72876222-72876241 | Msa0423130:CDS | 35.0% | |
| GAAAACATCAGCAAACCAAA+AGG | + | chr3_2:72876478-72876497 | None:intergenic | 35.0% | |
| TGCCTCTTAAAACTACCATA+AGG | + | chr3_2:72876622-72876641 | None:intergenic | 35.0% | |
| ATCGTAATGGCACTTATCAG+TGG | - | chr3_2:72873124-72873143 | Msa0423130:three_prime_UTR | 40.0% | |
| TCTGTTAGCAATAACACCAC+CGG | + | chr3_2:72873350-72873369 | None:intergenic | 40.0% | |
| AATAGCTGAAGCTTGAGTCA+AGG | + | chr3_2:72873515-72873534 | None:intergenic | 40.0% | |
| !! | ATTCGAGTTGGATCTTTCCA+AGG | - | chr3_2:72873532-72873551 | Msa0423130:intron | 40.0% |
| ATTGGAAGAAGGCTCTTGAA+AGG | + | chr3_2:72873574-72873593 | None:intergenic | 40.0% | |
| TTTCAAGAGCCTTCTTCCAA+TGG | - | chr3_2:72873573-72873592 | Msa0423130:intron | 40.0% | |
| ! | GTCCAAGATGGTTTGAGTTA+AGG | - | chr3_2:72873994-72874013 | Msa0423130:intron | 40.0% |
| CCACCAAAAACAATGTCATC+AGG | + | chr3_2:72874069-72874088 | None:intergenic | 40.0% | |
| !!! | CCTGATGACATTGTTTTTGG+TGG | - | chr3_2:72874066-72874085 | Msa0423130:intron | 40.0% |
| AAAGCAATTGAGGCCTTACA+TGG | - | chr3_2:72874158-72874177 | Msa0423130:CDS | 40.0% | |
| GATTAGCAGCAATGAAATCC+GGG | + | chr3_2:72874215-72874234 | None:intergenic | 40.0% | |
| CCCTGAATTCATGTCAACAT+AGG | + | chr3_2:72874396-72874415 | None:intergenic | 40.0% | |
| AACACAAGCAATGGCAAACA+GGG | + | chr3_2:72874569-72874588 | None:intergenic | 40.0% | |
| TAACACAAGCAATGGCAAAC+AGG | + | chr3_2:72874570-72874589 | None:intergenic | 40.0% | |
| GTTTGCCATTGCTTGTGTTA+TGG | - | chr3_2:72874570-72874589 | Msa0423130:intron | 40.0% | |
| TGAGGACTTCCATTGATGAA+AGG | + | chr3_2:72874604-72874623 | None:intergenic | 40.0% | |
| !!! | GTTTTGGTGGATTTCCTTGT+AGG | - | chr3_2:72874808-72874827 | Msa0423130:CDS | 40.0% |
| TCTTGGAAATTTCCTTGGAG+CGG | + | chr3_2:72875085-72875104 | None:intergenic | 40.0% | |
| ATCGTCAACAACATTGCTCT+TGG | + | chr3_2:72875102-72875121 | None:intergenic | 40.0% | |
| GAGCAATGTTGTTGACGATA+TGG | - | chr3_2:72875103-72875122 | Msa0423130:CDS | 40.0% | |
| ACATAAGGCACATACTGCAA+AGG | + | chr3_2:72875268-72875287 | None:intergenic | 40.0% | |
| TTGCAGTATGTGCCTTATGT+TGG | - | chr3_2:72875268-72875287 | Msa0423130:CDS | 40.0% | |
| AGCTATGGATGAGTACACTT+CGG | - | chr3_2:72875303-72875322 | Msa0423130:CDS | 40.0% | |
| ! | ACTTCGGAAATTTTCATGGG+TGG | - | chr3_2:72875319-72875338 | Msa0423130:CDS | 40.0% |
| ! | CTTCGGAAATTTTCATGGGT+GGG | - | chr3_2:72875320-72875339 | Msa0423130:CDS | 40.0% |
| GATAATAGGAGCAGCCAAAA+GGG | + | chr3_2:72875383-72875402 | None:intergenic | 40.0% | |
| AGATAATAGGAGCAGCCAAA+AGG | + | chr3_2:72875384-72875403 | None:intergenic | 40.0% | |
| TTTGGCTGCTCCTATTATCT+TGG | - | chr3_2:72875384-72875403 | Msa0423130:CDS | 40.0% | |
| TGCTCCTATTATCTTGGACT+TGG | - | chr3_2:72875390-72875409 | Msa0423130:CDS | 40.0% | |
| ! | AAACTGTGCAACTTGCTCAA+TGG | - | chr3_2:72875634-72875653 | Msa0423130:intron | 40.0% |
| ! | TGCAACTTGCTCAATGGTTA+TGG | - | chr3_2:72875640-72875659 | Msa0423130:intron | 40.0% |
| AGTATTAAGGAAACGGCCTT+TGG | + | chr3_2:72875667-72875686 | None:intergenic | 40.0% | |
| AAGTAGAATTAACGCACCAG+AGG | + | chr3_2:72876168-72876187 | None:intergenic | 40.0% | |
| TTTGACAATGCATTCACCAC+TGG | + | chr3_2:72876291-72876310 | None:intergenic | 40.0% | |
| AACATCATGAGAGCTTGTGT+TGG | - | chr3_2:72876330-72876349 | Msa0423130:intron | 40.0% | |
| ! | TCTAGGATCATGTTGTTCTC+TGG | + | chr3_2:72876363-72876382 | None:intergenic | 40.0% |
| AACAACGGTTCAACCCTTAC+CGG | - | chr3_2:72873328-72873347 | Msa0423130:intron | 45.0% | |
| AGCAATAACACCACCGGTAA+GGG | + | chr3_2:72873344-72873363 | None:intergenic | 45.0% | |
| TAGCAATAACACCACCGGTA+AGG | + | chr3_2:72873345-72873364 | None:intergenic | 45.0% | |
| CAAGCTTCAGCTATTCGAGT+TGG | - | chr3_2:72873520-72873539 | Msa0423130:intron | 45.0% | |
| AGTTGGATCTTTCCAAGGAG+AGG | - | chr3_2:72873537-72873556 | Msa0423130:intron | 45.0% | |
| GAGCATGAATTTCCTCTCCT+TGG | + | chr3_2:72873552-72873571 | None:intergenic | 45.0% | |
| GGAACCATGGATTCCATGTA+AGG | + | chr3_2:72874174-72874193 | None:intergenic | 45.0% | |
| AAATCCGGGTCATAGATACC+GGG | + | chr3_2:72874201-72874220 | None:intergenic | 45.0% | |
| GAAATCCGGGTCATAGATAC+CGG | + | chr3_2:72874202-72874221 | None:intergenic | 45.0% | |
| AGGAAGCAAACAAAGTGGAC+AGG | - | chr3_2:72874422-72874441 | Msa0423130:CDS | 45.0% | |
| GGAAGCAAACAAAGTGGACA+GGG | - | chr3_2:72874423-72874442 | Msa0423130:CDS | 45.0% | |
| GTTACTGTACCTCTCTGTGT+TGG | + | chr3_2:72874467-72874486 | None:intergenic | 45.0% | |
| TGTAGGACTCAATGACACCA+TGG | - | chr3_2:72874492-72874511 | Msa0423130:CDS | 45.0% | |
| AGCAGCAAAAAGGTTCTCCA+TGG | + | chr3_2:72874512-72874531 | None:intergenic | 45.0% | |
| TTCTGTCCACAGCAGCAAAA+AGG | + | chr3_2:72874522-72874541 | None:intergenic | 45.0% | |
| !! | CCTGGAACAAAAGTGTTCTG+AGG | + | chr3_2:72874622-72874641 | None:intergenic | 45.0% |
| ! | CCTCAGAACACTTTTGTTCC+AGG | - | chr3_2:72874619-72874638 | Msa0423130:intron | 45.0% |
| ! | GGTGGTGATGATTTCAAGAG+TGG | - | chr3_2:72874766-72874785 | Msa0423130:CDS | 45.0% |
| ! | CTCTTGCTGTCACCAACATA+AGG | + | chr3_2:72875283-72875302 | None:intergenic | 45.0% |
| TGTGTTGCACAACACATGTG+AGG | - | chr3_2:72875354-72875373 | Msa0423130:CDS | 45.0% | |
| GCTCAATGGTTATGGACCAA+AGG | - | chr3_2:72875648-72875667 | Msa0423130:intron | 45.0% | |
| CCATACTCTTCAGAAGCAGA+TGG | + | chr3_2:72875696-72875715 | None:intergenic | 45.0% | |
| ! | CCATCTGCTTCTGAAGAGTA+TGG | - | chr3_2:72875693-72875712 | Msa0423130:intron | 45.0% |
| AACTGAGGATGGTAGCAACA+GGG | + | chr3_2:72876131-72876150 | None:intergenic | 45.0% | |
| TAACTGAGGATGGTAGCAAC+AGG | + | chr3_2:72876132-72876151 | None:intergenic | 45.0% | |
| CTTGGTCAGATAACTGAGGA+TGG | + | chr3_2:72876142-72876161 | None:intergenic | 45.0% | |
| CATCCTCAGTTATCTGACCA+AGG | - | chr3_2:72876140-72876159 | Msa0423130:intron | 45.0% | |
| ATTATACGTGCAGGTTCCAC+CGG | - | chr3_2:72876260-72876279 | Msa0423130:intron | 45.0% | |
| CATGAGAGCTTGTGTTGGAT+TGG | - | chr3_2:72876335-72876354 | Msa0423130:intron | 45.0% | |
| TCCTAGAGTACAAGTGAAGC+AGG | - | chr3_2:72876376-72876395 | Msa0423130:CDS | 45.0% | |
| CCTAGAGTACAAGTGAAGCA+GGG | - | chr3_2:72876377-72876396 | Msa0423130:CDS | 45.0% | |
| CTAGAGTACAAGTGAAGCAG+GGG | - | chr3_2:72876378-72876397 | Msa0423130:CDS | 45.0% | |
| !! | CTCCCAAGTACTTTAGAGCA+GGG | - | chr3_2:72876524-72876543 | Msa0423130:CDS | 45.0% |
| !! | AGCCCTGCTCTAAAGTACTT+GGG | + | chr3_2:72876529-72876548 | None:intergenic | 45.0% |
| !! | AAGCCCTGCTCTAAAGTACT+TGG | + | chr3_2:72876530-72876549 | None:intergenic | 45.0% |
| !!! | AGCAGGGCTTAGCTTGTTTT+TGG | - | chr3_2:72876540-72876559 | Msa0423130:exon | 45.0% |
| !!! | GCAGGGCTTAGCTTGTTTTT+GGG | - | chr3_2:72876541-72876560 | Msa0423130:exon | 45.0% |
| !! | TAATAATATAATATAATAAC+CGG | + | chr3_2:72876244-72876263 | None:intergenic | 5.0% |
| TTAGGGTAATGCTTGTGGGC+TGG | - | chr3_2:72873299-72873318 | Msa0423130:intron | 50.0% | |
| TAGGGTAATGCTTGTGGGCT+GGG | - | chr3_2:72873300-72873319 | Msa0423130:intron | 50.0% | |
| CATGAACCTTGCTGATGCCA+TGG | - | chr3_2:72874104-72874123 | Msa0423130:intron | 50.0% | |
| GAGGCCTTACATGGAATCCA+TGG | - | chr3_2:72874167-72874186 | Msa0423130:CDS | 50.0% | |
| GAATCCATGGTTCCACTTCC+CGG | - | chr3_2:72874180-72874199 | Msa0423130:CDS | 50.0% | |
| ACTTCCCGGTATCTATGACC+CGG | - | chr3_2:72874194-72874213 | Msa0423130:CDS | 50.0% | |
| TGGACAGGGTTGTTGTACTC+TGG | - | chr3_2:72874437-72874456 | Msa0423130:CDS | 50.0% | |
| ! | GGAGAACCTTTTTGCTGCTG+TGG | - | chr3_2:72874513-72874532 | Msa0423130:CDS | 50.0% |
| ACAAGCAATGGCAAACAGGG+TGG | + | chr3_2:72874566-72874585 | None:intergenic | 50.0% | |
| GTGGATTTCCTTGTAGGAGC+TGG | - | chr3_2:72874814-72874833 | Msa0423130:CDS | 50.0% | |
| CCTTGATACCAGCTCCTACA+AGG | + | chr3_2:72874825-72874844 | None:intergenic | 50.0% | |
| CCTTGTAGGAGCTGGTATCA+AGG | - | chr3_2:72874822-72874841 | Msa0423130:CDS | 50.0% | |
| GGAAATTTCCTTGGAGCGGA+AGG | + | chr3_2:72875081-72875100 | None:intergenic | 50.0% | |
| AATGCCATCCTCTATGCACC+TGG | - | chr3_2:72875134-72875153 | Msa0423130:CDS | 50.0% | |
| ACATGATCAGGATGTTCGCC+AGG | + | chr3_2:72875155-72875174 | None:intergenic | 50.0% | |
| TGGTGACAGCAAGAGAGCTA+TGG | - | chr3_2:72875288-72875307 | Msa0423130:CDS | 50.0% | |
| ! | CACATGTGAGGACTCCCTTT+TGG | - | chr3_2:72875366-72875385 | Msa0423130:CDS | 50.0% |
| ! | CTCTCGTTTCAGGTGTCAGA+AGG | + | chr3_2:72875569-72875588 | None:intergenic | 50.0% |
| GATGGTAGCAACAGGGTGAA+AGG | + | chr3_2:72876124-72876143 | None:intergenic | 50.0% | |
| GAGCCTTGGTCAGATAACTG+AGG | + | chr3_2:72876146-72876165 | None:intergenic | 50.0% | |
| TTATCTGACCAAGGCTCCTC+TGG | - | chr3_2:72876149-72876168 | Msa0423130:intron | 50.0% | |
| TTATACGTGCAGGTTCCACC+GGG | - | chr3_2:72876261-72876280 | Msa0423130:intron | 50.0% | |
| CCCTGCTTCACTTGTACTCT+AGG | + | chr3_2:72876380-72876399 | None:intergenic | 50.0% | |
| !! | GCTCCCAAGTACTTTAGAGC+AGG | - | chr3_2:72876523-72876542 | Msa0423130:CDS | 50.0% |
| ! | AGGGTAATGCTTGTGGGCTG+GGG | - | chr3_2:72873301-72873320 | Msa0423130:intron | 55.0% |
| AACGGTTCAACCCTTACCGG+TGG | - | chr3_2:72873331-72873350 | Msa0423130:intron | 55.0% | |
| ACCTTGCTGATGCCATGGCT+AGG | - | chr3_2:72874109-72874128 | Msa0423130:CDS | 55.0% | |
| CCTTGCTGATGCCATGGCTA+GGG | - | chr3_2:72874110-72874129 | Msa0423130:CDS | 55.0% | |
| AAAAACCCTGGCCCTAGCCA+TGG | + | chr3_2:72874124-72874143 | None:intergenic | 55.0% | |
| GATACCGGGAAGTGGAACCA+TGG | + | chr3_2:72874187-72874206 | None:intergenic | 55.0% | |
| GGGTCATAGATACCGGGAAG+TGG | + | chr3_2:72874195-72874214 | None:intergenic | 55.0% | |
| TCTGGACTGCCAACACAGAG+AGG | - | chr3_2:72874455-72874474 | Msa0423130:CDS | 55.0% | |
| GCAATGGCAAACAGGGTGGA+AGG | + | chr3_2:72874562-72874581 | None:intergenic | 55.0% | |
| CTTGGAGCGGAAGGTTTGTG+GGG | + | chr3_2:72875072-72875091 | None:intergenic | 55.0% | |
| CCTTGGAGCGGAAGGTTTGT+GGG | + | chr3_2:72875073-72875092 | None:intergenic | 55.0% | |
| TCCTTGGAGCGGAAGGTTTG+TGG | + | chr3_2:72875074-72875093 | None:intergenic | 55.0% | |
| TTCGCCAGGTGCATAGAGGA+TGG | + | chr3_2:72875141-72875160 | None:intergenic | 55.0% | |
| GATGTTCGCCAGGTGCATAG+AGG | + | chr3_2:72875145-72875164 | None:intergenic | 55.0% | |
| TTAACGCACCAGAGGAGCCT+TGG | + | chr3_2:72876160-72876179 | None:intergenic | 55.0% | |
| GTCAAAGCAGCGAGCAATGC+TGG | - | chr3_2:72876305-72876324 | Msa0423130:intron | 55.0% | |
| !! | GTAATGCTTGTGGGCTGGGG+TGG | - | chr3_2:72873304-72873323 | Msa0423130:intron | 60.0% |
| !! | GTGGGCTGGGGTGGAAACAA+CGG | - | chr3_2:72873313-72873332 | Msa0423130:intron | 60.0% |
| CCCTAGCCATGGCATCAGCA+AGG | + | chr3_2:72874113-72874132 | None:intergenic | 60.0% | |
| TGATGCCATGGCTAGGGCCA+GGG | - | chr3_2:72874116-72874135 | Msa0423130:CDS | 60.0% | |
| GGAAGGTTTGTGGGGCTGAG+AGG | + | chr3_2:72875064-72875083 | None:intergenic | 60.0% | |
| CCCACAAACCTTCCGCTCCA+AGG | - | chr3_2:72875070-72875089 | Msa0423130:CDS | 60.0% | |
| GCATTCACCACTGGTGTGCC+CGG | + | chr3_2:72876282-72876301 | None:intergenic | 60.0% | |
| CTGATGCCATGGCTAGGGCC+AGG | - | chr3_2:72874115-72874134 | Msa0423130:CDS | 65.0% | |
| TTCACCACTGGTGTGCCCGG+TGG | + | chr3_2:72876279-72876298 | None:intergenic | 65.0% | |
| GGTTCCACCGGGCACACCAG+TGG | - | chr3_2:72876272-72876291 | Msa0423130:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 72872913 | 72876656 | 72872913 | ID=Msa0423130;Name=Msa0423130 |
| chr3_2 | mRNA | 72872913 | 72876656 | 72872913 | ID=Msa0423130-mRNA-1;Parent=Msa0423130;Name=Msa0423130-mRNA-1;_AED=0.09;_eAED=0.09;_QI=108|1|1|1|1|1|10|264|510 |
| chr3_2 | exon | 72872913 | 72873296 | 72872913 | ID=Msa0423130-mRNA-1:exon:18053;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72873399 | 72873461 | 72873399 | ID=Msa0423130-mRNA-1:exon:18052;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72874107 | 72874295 | 72874107 | ID=Msa0423130-mRNA-1:exon:18051;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72874382 | 72874558 | 72874382 | ID=Msa0423130-mRNA-1:exon:18050;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72874726 | 72874841 | 72874726 | ID=Msa0423130-mRNA-1:exon:18049;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72874929 | 72875155 | 72874929 | ID=Msa0423130-mRNA-1:exon:18048;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72875262 | 72875509 | 72875262 | ID=Msa0423130-mRNA-1:exon:18047;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72875975 | 72876110 | 72875975 | ID=Msa0423130-mRNA-1:exon:18046;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72876198 | 72876266 | 72876198 | ID=Msa0423130-mRNA-1:exon:18045;Parent=Msa0423130-mRNA-1 |
| chr3_2 | exon | 72876361 | 72876656 | 72876361 | ID=Msa0423130-mRNA-1:exon:18044;Parent=Msa0423130-mRNA-1 |
| chr3_2 | five_prime_UTR | 72876549 | 72876656 | 72876549 | ID=Msa0423130-mRNA-1:five_prime_utr;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72876361 | 72876548 | 72876361 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72876198 | 72876266 | 72876198 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72875975 | 72876110 | 72875975 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72875262 | 72875509 | 72875262 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72874929 | 72875155 | 72874929 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72874726 | 72874841 | 72874726 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72874382 | 72874558 | 72874382 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72874107 | 72874295 | 72874107 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72873399 | 72873461 | 72873399 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | CDS | 72873177 | 72873296 | 72873177 | ID=Msa0423130-mRNA-1:cds;Parent=Msa0423130-mRNA-1 |
| chr3_2 | three_prime_UTR | 72872913 | 72873176 | 72872913 | ID=Msa0423130-mRNA-1:three_prime_utr;Parent=Msa0423130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
