AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1406670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406670 MtrunA17_Chr7g0276421 97.219 755 10 2 1 745 1 754 0.0 1518
Msa1406670 MtrunA17_Chr5g0433851 69.231 104 30 1 7 110 23 124 4.38e-33 132
Msa1406670 MtrunA17_Chr3g0109791 64.545 110 35 2 8 115 38 145 3.16e-32 128
Msa1406670 MtrunA17_Chr6g0469431 52.212 113 44 2 6 118 29 131 1.36e-31 123
Msa1406670 MtrunA17_Chr6g0481061 68.269 104 31 1 8 111 38 139 3.72e-30 124
Msa1406670 MtrunA17_Chr1g0181771 50.450 111 43 2 8 116 28 128 6.33e-30 120
Msa1406670 MtrunA17_Chr8g0348391 52.336 107 41 1 11 117 48 144 1.06e-29 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1406670 AT1G01060.8 44.314 765 273 24 8 744 5 644 2.76e-125 388
Msa1406670 AT1G01060.2 44.314 765 273 24 8 744 5 644 2.76e-125 388
Msa1406670 AT1G01060.3 44.314 765 273 24 8 744 5 644 2.76e-125 388
Msa1406670 AT1G01060.1 44.314 765 273 24 8 744 5 644 2.76e-125 388
Msa1406670 AT1G01060.7 44.314 765 273 24 8 744 5 644 2.76e-125 388
Msa1406670 AT1G01060.4 44.241 764 274 23 8 744 5 643 2.89e-125 388
Msa1406670 AT2G46830.1 37.731 758 288 30 8 740 5 603 3.55e-87 287
Msa1406670 AT1G01060.6 40.113 708 271 24 65 744 60 642 1.72e-77 262
Msa1406670 AT1G01060.5 40.113 708 271 24 65 744 60 642 1.72e-77 262
Msa1406670 AT2G46830.3 39.225 413 183 18 347 740 158 521 1.88e-44 168
Msa1406670 AT2G46830.2 39.225 413 183 18 347 740 158 521 1.88e-44 168
Msa1406670 AT5G37260.1 66.038 106 30 1 8 113 17 116 2.03e-33 130
Msa1406670 AT5G17300.1 70.297 101 28 1 10 110 38 136 9.15e-33 131
Msa1406670 AT1G18330.1 57.692 130 48 2 14 138 37 164 1.48e-32 129
Msa1406670 AT3G10113.1 57.692 130 48 2 14 138 52 179 2.10e-32 129
Msa1406670 AT1G18330.2 57.692 130 48 2 14 138 63 190 3.89e-32 129
Msa1406670 AT5G52660.1 55.238 105 37 2 8 112 53 147 9.39e-30 121
Msa1406670 AT5G52660.2 55.238 105 37 2 8 112 53 147 9.86e-30 121
Msa1406670 AT3G09600.4 53.684 95 34 1 16 110 32 116 1.42e-29 119
Msa1406670 AT3G09600.1 53.684 95 34 1 16 110 32 116 1.44e-29 119
Msa1406670 AT3G09600.7 53.684 95 34 1 16 110 32 116 1.44e-29 119
Msa1406670 AT3G09600.2 53.684 95 34 1 16 110 32 116 1.66e-29 119
Msa1406670 AT3G09600.6 53.684 95 34 1 16 110 32 116 1.66e-29 119
Msa1406670 AT4G01280.1 52.991 117 43 3 8 122 40 146 5.18e-29 118
Msa1406670 AT4G01280.2 52.991 117 43 3 8 122 40 146 5.24e-29 118
Msa1406670 AT5G02840.4 51.485 101 39 1 10 110 31 121 2.52e-28 115
Msa1406670 AT5G02840.1 52.632 95 35 1 16 110 37 121 3.19e-28 115
Msa1406670 AT5G02840.2 52.632 95 35 1 16 110 37 121 3.19e-28 115
Msa1406670 AT5G02840.3 52.632 95 35 1 16 110 37 121 3.42e-28 115
Msa1406670 AT5G02840.5 51.485 101 39 1 10 110 31 121 4.53e-28 115
Msa1406670 AT1G01520.2 51.456 103 40 1 8 110 42 134 6.63e-28 114
Msa1406670 AT1G01520.4 51.456 103 40 1 8 110 42 134 6.63e-28 114
Msa1406670 AT1G01520.1 38.503 187 80 6 8 170 42 217 7.27e-28 114
Msa1406670 AT1G01520.3 38.503 187 80 6 8 170 42 217 8.96e-28 114
Msa1406670 AT3G09600.3 45.455 66 26 1 45 110 5 60 1.10e-13 72.0
Msa1406670 AT3G09600.8 45.455 66 26 1 45 110 5 60 1.10e-13 72.0
Msa1406670 AT3G09600.5 45.455 66 26 1 45 110 5 60 1.26e-13 71.2
Msa1406670 AT3G09600.9 45.455 66 26 1 45 110 5 60 1.26e-13 71.2

Find 225 sgRNAs with CRISPR-Local

Find 816 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTCTTTCACTCATTT+TGG 0.186298 tig0023238:+47224 Msa1406670:three_prime_UTR
ACAGGGACGACTTGCCTTTC+GGG 0.205941 tig0023238:+46413 Msa1406670:intron
TTATAAACATGTCGGTATTT+TGG 0.207040 tig0023238:+47143 Msa1406670:three_prime_UTR
TTCTCGGATTGAACCGATTT+CGG 0.267063 tig0023238:-45226 None:intergenic
TCCTCATGATTTGATAAATA+AGG 0.270829 tig0023238:+46476 Msa1406670:CDS
GCTTTGCAAGCTCAACATTC+AGG 0.271530 tig0023238:+45973 Msa1406670:CDS
TTAGCAACCTTCTTGATTCT+TGG 0.278037 tig0023238:+46292 Msa1406670:CDS
TACTTCATGTTTCTTCTCTA+AGG 0.281650 tig0023238:-46986 None:intergenic
CATTCCGCCCCTGCTTTCCT+TGG 0.281657 tig0023238:-46688 None:intergenic
TACAGGGACGACTTGCCTTT+CGG 0.283902 tig0023238:+46412 Msa1406670:intron
GGTTTCCCATCTAGACAAAT+TGG 0.286499 tig0023238:+45706 Msa1406670:CDS
AGATTGGTTGTGGATGCTTC+TGG 0.299753 tig0023238:+36772 Msa1406670:five_prime_UTR
GAGGGAGGAGTGAGGTGGTT+TGG 0.306291 tig0023238:-37384 None:intergenic
CAAAGACTGCTGTGCAAATC+AGG 0.320713 tig0023238:+37787 Msa1406670:CDS
GGCGAACCAATTTGTCTAGA+TGG 0.323385 tig0023238:-45712 None:intergenic
ATATCTCCTTGATCTGTCTT+AGG 0.340962 tig0023238:-45895 None:intergenic
CATCATCTATCTTCAACATC+TGG 0.356720 tig0023238:-45144 None:intergenic
TGCCGAAGATACAGATGAAC+AGG 0.360829 tig0023238:-44990 None:intergenic
ATGAGGAGGTGAAAAGCTTT+GGG 0.361595 tig0023238:-46460 None:intergenic
TATTTAGATCAGAATCAAAA+AGG 0.363562 tig0023238:-36900 None:intergenic
CTTGCTGCAGCATGGGCTGC+AGG 0.364555 tig0023238:-45613 None:intergenic
CTCTCCTCCTCCTTAGGCTC+AGG 0.366670 tig0023238:+37404 Msa1406670:five_prime_UTR
GAACCCTGATTCCAACAAAA+TGG 0.366904 tig0023238:+46107 Msa1406670:CDS
CTAGAAGCCCTCAAGCTATA+TGG 0.366925 tig0023238:+37653 Msa1406670:CDS
TTGCTCCACTATGTAATGTT+GGG 0.369916 tig0023238:-44711 None:intergenic
TTACATAGTGGAGCAAAGTA+TGG 0.371275 tig0023238:+44718 Msa1406670:CDS
AATATACATATGTATTGTAT+TGG 0.378045 tig0023238:+47179 Msa1406670:three_prime_UTR
GAATCAGGGTTCTCAGAAAC+TGG 0.380151 tig0023238:-46096 None:intergenic
GACAAATTCCTGCACCATAA+GGG 0.382064 tig0023238:+45045 Msa1406670:CDS
AATACAATACATATGTATAT+TGG 0.387050 tig0023238:-47177 None:intergenic
GGATTTCTGACCATGGGTCT+TGG 0.391303 tig0023238:+46603 Msa1406670:CDS
CATGAGGAGGTGAAAAGCTT+TGG 0.391387 tig0023238:-46461 None:intergenic
CTTGTAAAAGGTGCTGCATT+AGG 0.396536 tig0023238:+44604 Msa1406670:CDS
CTTCTATATCGACGACTACT+AGG 0.397927 tig0023238:-46267 None:intergenic
ACGTAGGTAGTAATTTAATA+TGG 0.398959 tig0023238:-46910 None:intergenic
AAACTTAAGACTCGTCGAAC+AGG 0.401478 tig0023238:+46633 Msa1406670:CDS
TGGTGCTGTGGACTTCGTTT+TGG 0.406608 tig0023238:+37101 Msa1406670:five_prime_UTR
CACGTTGTTGATGGGAACTT+TGG 0.409244 tig0023238:+45325 Msa1406670:CDS
ATATACATATGTATTGTATT+GGG 0.410774 tig0023238:+47180 Msa1406670:three_prime_UTR
ACATTGGTCTTGCGAGGATA+AGG 0.411349 tig0023238:-44682 None:intergenic
GATTCTCCTGCTTGCTCTCA+AGG 0.412243 tig0023238:+45682 Msa1406670:CDS
AGAACAATTCTCCAACTTAG+AGG 0.412800 tig0023238:-45203 None:intergenic
GCTGGATTTGCGAAGAGATT+AGG 0.415370 tig0023238:-45427 None:intergenic
CCTTCCAGGCGTATCCTCTT+GGG 0.419975 tig0023238:-46738 None:intergenic
GAGAAGGAAGCACTTGTAAA+AGG 0.422043 tig0023238:+44592 Msa1406670:CDS
AATTCTAGAAAGTATGTGTC+AGG 0.422288 tig0023238:-47256 None:intergenic
CGAGCATGGCAGCGTATAGA+AGG 0.422755 tig0023238:+37677 Msa1406670:CDS
GGAGAATTGTTCTCCGAAAT+CGG 0.424106 tig0023238:+45213 Msa1406670:CDS
AGACAAATTCCTGCACCATA+AGG 0.431378 tig0023238:+45044 Msa1406670:CDS
TCACTTGTGTTTGATGCAGC+TGG 0.433165 tig0023238:-45445 None:intergenic
TTGTATTGGGCTGATGATAC+AGG 0.433864 tig0023238:+47193 Msa1406670:three_prime_UTR
AGCAAAACTTGCTGCAGCAT+GGG 0.435145 tig0023238:-45620 None:intergenic
AGTTGAGAAGGAAGGAAGGA+AGG 0.438618 tig0023238:-36826 None:intergenic
GCTTTGGGGCAACACCTCTC+TGG 0.439351 tig0023238:-46445 None:intergenic
TCCTCCCTCTCCTCCTCCTT+AGG 0.442827 tig0023238:+37398 Msa1406670:five_prime_UTR
CAATCTAAGTAACTTTGTAA+TGG 0.443352 tig0023238:-47109 None:intergenic
AAATGCATTTCTTGCTCTCA+AGG 0.445522 tig0023238:-46524 None:intergenic
TAGTAGAGGCCAAGGAAAGC+AGG 0.446953 tig0023238:+46679 Msa1406670:CDS
ACTGCATGGTGGGCAGCTCA+TGG 0.449952 tig0023238:+45778 Msa1406670:CDS
ATCACTGTGCACGTTGTTGA+TGG 0.454210 tig0023238:+45316 Msa1406670:CDS
CATCATTTCTAACTCCCTCT+TGG 0.454859 tig0023238:+46826 Msa1406670:three_prime_UTR
TGTTTACTAATATTTGTTGA+TGG 0.455780 tig0023238:-45868 None:intergenic
TTGTGTTGTGATGTAGTTGT+TGG 0.459586 tig0023238:+36797 Msa1406670:five_prime_UTR
CGGCAGCTCATGAAACTTGT+CGG 0.461027 tig0023238:+46874 Msa1406670:three_prime_UTR
GAGGACAGGCAAAAGCTGTC+TGG 0.462645 tig0023238:-45825 None:intergenic
AAGTGTGAATTCAACATATC+CGG 0.465143 tig0023238:-36943 None:intergenic
ACAAATTCCTGCACCATAAG+GGG 0.465629 tig0023238:+45046 Msa1406670:CDS
GTTTATATCAAGATTAATAG+TGG 0.465812 tig0023238:-46070 None:intergenic
CTTGCTCATGCAGAACATAT+AGG 0.466013 tig0023238:+37762 Msa1406670:intron
CAAGGAAAGCAGGGGCGGAA+TGG 0.468012 tig0023238:+46689 Msa1406670:CDS
ACCCTGTTCATCTGTATCTT+CGG 0.470243 tig0023238:+44988 Msa1406670:CDS
GCAAAAGAAACAGAAAGAAT+AGG 0.471987 tig0023238:-37293 None:intergenic
AGTAAGTAAGTAAGTTGAGA+AGG 0.474165 tig0023238:-36838 None:intergenic
TGCTCGGCCATATAGCTTGA+GGG 0.477143 tig0023238:-37660 None:intergenic
TTGCGAGGATAAGGATTGCT+TGG 0.483780 tig0023238:-44673 None:intergenic
GACTCTACATTTCAGCCAAT+AGG 0.484471 tig0023238:+45388 Msa1406670:CDS
ATAAAATACTCAGATTCATC+CGG 0.486597 tig0023238:+36924 Msa1406670:five_prime_UTR
GTTGAGAAGGAAGGAAGGAA+GGG 0.490681 tig0023238:-36825 None:intergenic
TTTGCTCCACTATGTAATGT+TGG 0.491563 tig0023238:-44712 None:intergenic
AGCTGCTGCAACTGCATGGT+GGG 0.492943 tig0023238:+45768 Msa1406670:CDS
CAACCACCTAAGACAGATCA+AGG 0.494885 tig0023238:+45889 Msa1406670:CDS
CAAGAGGATACGCCTGGAAG+GGG 0.496539 tig0023238:+46740 Msa1406670:CDS
GTAGCTAAATGATCCGCATC+AGG 0.496824 tig0023238:-46240 None:intergenic
TCAGCATGGTTATGTGCAAA+TGG 0.496955 tig0023238:-45523 None:intergenic
GAAATTGTAGTGGCTGAGAT+TGG 0.499007 tig0023238:+36756 None:intergenic
GATAAGATACAGTTTGTAGC+AGG 0.501001 tig0023238:-36872 None:intergenic
TGGGACCCGTCTCTTCAACT+TGG 0.503574 tig0023238:-46719 None:intergenic
CCAAGAGGATACGCCTGGAA+GGG 0.504041 tig0023238:+46739 Msa1406670:CDS
AGTTGTTGATGCAGGAGGAC+AGG 0.504260 tig0023238:-45839 None:intergenic
GATCTTGTTCCCTGAGCCTA+AGG 0.505379 tig0023238:-37414 None:intergenic
GTTATTACCTCTTTCACTGA+AGG 0.506309 tig0023238:-45076 None:intergenic
CGAAGAAAGTGATAGAATGA+AGG 0.508558 tig0023238:-47047 None:intergenic
CTTCTATACGCTGCCATGCT+CGG 0.509729 tig0023238:-37676 None:intergenic
GAGGAGGAGAGGGAGGAGTG+AGG 0.509937 tig0023238:-37392 None:intergenic
CAGGGTTCTCAGAAACTGGT+TGG 0.511462 tig0023238:-46092 None:intergenic
GTTTACACCTTCAGTGAAAG+AGG 0.512851 tig0023238:+45069 Msa1406670:CDS
CCTTCTTGATTCTTGGAAGG+AGG 0.514276 tig0023238:+46299 Msa1406670:CDS
CATTTGTCGAACCTCTAAGT+TGG 0.515112 tig0023238:+45192 Msa1406670:CDS
AAATAGTAAGAAGGAGTGGT+TGG 0.516390 tig0023238:-37333 None:intergenic
CAACCTTCTTGATTCTTGGA+AGG 0.517741 tig0023238:+46296 Msa1406670:CDS
TGTAGAAGACATGTTGAGAA+AGG 0.517978 tig0023238:-45554 None:intergenic
AGTAAGTTGAGAAGGAAGGA+AGG 0.518550 tig0023238:-36830 None:intergenic
TTGCTGCAGCATGGGCTGCA+GGG 0.518760 tig0023238:-45612 None:intergenic
ATGCTCGGCCATATAGCTTG+AGG 0.521384 tig0023238:-37661 None:intergenic
CCCAAGAGGATACGCCTGGA+AGG 0.522353 tig0023238:+46738 Msa1406670:CDS
ACGTGCACAGTGATATGTCT+TGG 0.523923 tig0023238:-45307 None:intergenic
TCTCCTCCTCCTTAGGCTCA+GGG 0.525243 tig0023238:+37405 Msa1406670:five_prime_UTR
AGTAAGTAAGTTGAGAAGGA+AGG 0.526088 tig0023238:-36834 None:intergenic
GGCAGCTCATGAAACTTGTC+GGG 0.528645 tig0023238:+46875 Msa1406670:three_prime_UTR
GCAGCACCAGCATACTCCTC+TGG 0.529443 tig0023238:+37454 Msa1406670:CDS
GCGAACCAATTTGTCTAGAT+GGG 0.532474 tig0023238:-45711 None:intergenic
CAGCAAAACTTGCTGCAGCA+TGG 0.533463 tig0023238:-45621 None:intergenic
CGTGCACAGTGATATGTCTT+GGG 0.533974 tig0023238:-45306 None:intergenic
TGAGCCTAAGGAGGAGGAGA+GGG 0.535151 tig0023238:-37402 None:intergenic
ACAAGATCTTCTGAGCCTCA+TGG 0.535619 tig0023238:+37429 Msa1406670:exon
GAGGAGAGGGAGGAGTGAGG+TGG 0.539802 tig0023238:-37389 None:intergenic
AAAAGTATTAACAGTCCTCA+AGG 0.540476 tig0023238:+44961 Msa1406670:CDS
TCTCCTTGATCTGTCTTAGG+TGG 0.542096 tig0023238:-45892 None:intergenic
GATTCAGATGAAGAAACAGC+TGG 0.543112 tig0023238:-46006 None:intergenic
CTGATAGACCGGTCTTCTTG+TGG 0.544065 tig0023238:+46141 Msa1406670:CDS
CTGACCATGGGTCTTGGACA+AGG 0.548831 tig0023238:+46609 Msa1406670:CDS
TGAGAAAGAATCACTTCTAG+AGG 0.549009 tig0023238:+44792 Msa1406670:CDS
CAGTAGCTGCTGCAACTGCA+TGG 0.549463 tig0023238:+45764 Msa1406670:CDS
TGGAGAAGACGTCGTTCTCA+AGG 0.549922 tig0023238:+37474 Msa1406670:CDS
GAAGATTCTACATTTGCATA+CGG 0.549998 tig0023238:-45655 None:intergenic
TTCACAGCTAGAGGTTGTGT+TGG 0.551194 tig0023238:-46166 None:intergenic
AGAGGATACGCCTGGAAGGG+GGG 0.551215 tig0023238:+46742 Msa1406670:CDS
AGAGAAGGATGAGAAAGAAA+AGG 0.551265 tig0023238:+46203 Msa1406670:CDS
CTGAGCCTAAGGAGGAGGAG+AGG 0.553694 tig0023238:-37403 None:intergenic
AAGAGGATACGCCTGGAAGG+GGG 0.554626 tig0023238:+46741 Msa1406670:CDS
TTCACACGGTAAACAAGCAA+TGG 0.555075 tig0023238:+44765 Msa1406670:CDS
CAGATGTTGAAGATAGATGA+TGG 0.559885 tig0023238:+45145 Msa1406670:CDS
AGTAGAGGCCAAGGAAAGCA+GGG 0.563052 tig0023238:+46680 Msa1406670:CDS
GAGGAAATAGTAAGAAGGAG+TGG 0.563725 tig0023238:-37337 None:intergenic
TATCCTCGCAAGACCAATGT+TGG 0.566159 tig0023238:+44685 Msa1406670:CDS
TGTTTCTTCATCTGAATCAG+AGG 0.567469 tig0023238:+46011 Msa1406670:CDS
AAGATGTTTAGTAGAGGCCA+AGG 0.570129 tig0023238:+46671 Msa1406670:CDS
TAATGTTGGGGTACCAACAT+TGG 0.570681 tig0023238:-44698 None:intergenic
TCTACATTTCAGCCAATAGG+AGG 0.570815 tig0023238:+45391 Msa1406670:CDS
TGCAACCAAGTTGAAGAGAC+GGG 0.572457 tig0023238:+46714 Msa1406670:CDS
TCCTTATTTATCAAATCATG+AGG 0.575227 tig0023238:-46477 None:intergenic
AGTAACTGATCTTGCAGAGG+AGG 0.576051 tig0023238:-45931 None:intergenic
GCCTAAGGAGGAGGAGAGGG+AGG 0.576460 tig0023238:-37399 None:intergenic
TGTTGGAACCACAAGAAGAC+CGG 0.580340 tig0023238:-46149 None:intergenic
TAAGTTAAATACTTCATCAA+AGG 0.580402 tig0023238:+46047 Msa1406670:CDS
GTTCCCTGAGCCTAAGGAGG+AGG 0.580710 tig0023238:-37408 None:intergenic
GATAAATAAGGATAATCAGA+TGG 0.582791 tig0023238:+46488 Msa1406670:CDS
AGGAGCATAAAGATGAGGAA+AGG 0.584458 tig0023238:+44900 Msa1406670:intron
ATCAGTCTCTTCACAGCTAG+AGG 0.585395 tig0023238:-46175 None:intergenic
AACATGACTTTATTATCCAA+AGG 0.585960 tig0023238:+36996 Msa1406670:five_prime_UTR
AAGACATGTTGAGAAAGGAT+TGG 0.586137 tig0023238:-45549 None:intergenic
TCAAGCTATATGGCCGAGCA+TGG 0.586429 tig0023238:+37663 Msa1406670:CDS
CAGGCAAAAGCTGTCTGGAG+TGG 0.586706 tig0023238:-45820 None:intergenic
TACATTTCAGCCAATAGGAG+GGG 0.587380 tig0023238:+45393 Msa1406670:CDS
GTACAAAATAACAATGAGGA+GGG 0.588065 tig0023238:+46582 Msa1406670:CDS
GCTCATGAAACTTGTCGGGT+AGG 0.588941 tig0023238:+46879 Msa1406670:three_prime_UTR
GAAAGGATTGGTAATCAGCA+TGG 0.589647 tig0023238:-45537 None:intergenic
GTAGTGGCTGAGATTGGTTG+TGG 0.589998 tig0023238:+36762 None:intergenic
TTGCAACCAAGTTGAAGAGA+CGG 0.591475 tig0023238:+46713 Msa1406670:CDS
GGCTGCAGGGTGTTGCAGCA+AGG 0.592386 tig0023238:-45599 None:intergenic
GAGCAGAGGAAATAGTAAGA+AGG 0.592497 tig0023238:-37342 None:intergenic
AAACCTCCTTGAGAGCAAGC+AGG 0.592869 tig0023238:-45688 None:intergenic
TCACTGTGCACGTTGTTGAT+GGG 0.593058 tig0023238:+45317 Msa1406670:CDS
TGCTCCACTATGTAATGTTG+GGG 0.594962 tig0023238:-44710 None:intergenic
TCTTCTCCAGAGGAGTATGC+TGG 0.595431 tig0023238:-37460 None:intergenic
AGGGCAGAAAACTGATAGAC+CGG 0.597583 tig0023238:+46130 Msa1406670:CDS
AGGAAATGATTGATGACTAG+AGG 0.599729 tig0023238:-45491 None:intergenic
GGAGCTACAGTTGTTGATGC+AGG 0.599804 tig0023238:-45847 None:intergenic
AGAGACTGATGCGCTAGAGA+AGG 0.599937 tig0023238:+46188 Msa1406670:CDS
GAAGATGCAATTGCAATAAG+TGG 0.600078 tig0023238:-44745 None:intergenic
GAGGAGGGATTTCTGACCAT+GGG 0.602071 tig0023238:+46597 Msa1406670:CDS
CCTCCTTCCAAGAATCAAGA+AGG 0.605249 tig0023238:-46299 None:intergenic
ATGAACAGGGTGCCTCCTTG+AGG 0.606893 tig0023238:-44976 None:intergenic
AGAATGTAAAATACCTGATG+CGG 0.606991 tig0023238:+46227 Msa1406670:CDS
TGTACAAAATAACAATGAGG+AGG 0.608346 tig0023238:+46581 Msa1406670:CDS
GAGGCCAAGGAAAGCAGGGG+CGG 0.609140 tig0023238:+46684 Msa1406670:CDS
CCCTGATTCCAACAAAATGG+AGG 0.609942 tig0023238:+46110 Msa1406670:CDS
TTGGAAGGAGGTGTCTGAAG+AGG 0.610275 tig0023238:+46311 Msa1406670:CDS
GCTGCAATAGCTGTTACACT+AGG 0.611198 tig0023238:-45736 None:intergenic
ATGCATTTGTAATTGTGACC+AGG 0.611387 tig0023238:+46539 Msa1406670:CDS
TTTACCTTGTCCAAGACCCA+TGG 0.612274 tig0023238:-46613 None:intergenic
ATTGCAATTGCATCTTCACA+CGG 0.615445 tig0023238:+44751 Msa1406670:CDS
CTACATTTCAGCCAATAGGA+GGG 0.615585 tig0023238:+45392 Msa1406670:CDS
AGATACAGTTTGTAGCAGGA+AGG 0.617027 tig0023238:-36868 None:intergenic
TTATGTGCAAATGGAGGACA+AGG 0.617284 tig0023238:-45514 None:intergenic
TCTCCTGCTTGCTCTCAAGG+AGG 0.617634 tig0023238:+45685 Msa1406670:CDS
CTTGTTCCCTGAGCCTAAGG+AGG 0.618230 tig0023238:-37411 None:intergenic
TCATCTGAATCAGAGGAGAG+TGG 0.620785 tig0023238:+46018 Msa1406670:CDS
GAGAACGACGTCTTCTCCAG+AGG 0.621233 tig0023238:-37470 None:intergenic
TAAACAATACAGACACCAAG+AGG 0.623421 tig0023238:-46841 None:intergenic
GCAATAGCTGTTACACTAGG+AGG 0.625281 tig0023238:-45733 None:intergenic
TTACAAAAGATGTTTAGTAG+AGG 0.626106 tig0023238:+46665 Msa1406670:CDS
ACATTTCAGCCAATAGGAGG+GGG 0.626802 tig0023238:+45394 Msa1406670:CDS
AACTTAAGACTCGTCGAACA+GGG 0.627230 tig0023238:+46634 Msa1406670:CDS
TCTGGAGAATAGAGCCCGAA+AGG 0.627276 tig0023238:-46427 None:intergenic
GGTACCCCAACATTACATAG+TGG 0.634415 tig0023238:+44706 Msa1406670:CDS
CCTGATTCCAACAAAATGGA+GGG 0.636366 tig0023238:+46111 Msa1406670:CDS
TGAGGAGGGATTTCTGACCA+TGG 0.636431 tig0023238:+46596 Msa1406670:CDS
CAAATTCCTGCACCATAAGG+GGG 0.636736 tig0023238:+45047 Msa1406670:CDS
ATTCTAGAAAGTATGTGTCA+GGG 0.636818 tig0023238:-47255 None:intergenic
GTTCAATCCGAGAAAACAGA+TGG 0.637949 tig0023238:+45235 Msa1406670:CDS
TCACAAAACAAAGAGAACGT+TGG 0.639437 tig0023238:+37606 Msa1406670:CDS
TAGCTGCTGCAACTGCATGG+TGG 0.645180 tig0023238:+45767 Msa1406670:CDS
GTACCAACATTGGTCTTGCG+AGG 0.646677 tig0023238:-44688 None:intergenic
TGAGGAGGTGAAAAGCTTTG+GGG 0.648977 tig0023238:-46459 None:intergenic
TTATTTATCAAATCATGAGG+AGG 0.652992 tig0023238:-46474 None:intergenic
AAGTGAAAATCAAAATAACA+TGG 0.654350 tig0023238:+45462 Msa1406670:CDS
GCATGGTTATGTGCAAATGG+AGG 0.655038 tig0023238:-45520 None:intergenic
ATGCTGGTGCTGCATCCATG+AGG 0.658977 tig0023238:-37444 None:intergenic
ATGGTGCAGGAATTTGTCTG+TGG 0.659918 tig0023238:-45040 None:intergenic
GTAGAGGCCAAGGAAAGCAG+GGG 0.661260 tig0023238:+46681 Msa1406670:CDS
TGTGACATGAAGCAGAGCAG+AGG 0.662889 tig0023238:-37356 None:intergenic
TGTATTGGGCTGATGATACA+GGG 0.665662 tig0023238:+47194 Msa1406670:three_prime_UTR
CCAAGAAAGTAAAAGAACGT+AGG 0.666408 tig0023238:-46926 None:intergenic
TCTAGTAACTGATCTTGCAG+AGG 0.667647 tig0023238:-45934 None:intergenic
TTGAAGAGACGGGTCCCAAG+AGG 0.668417 tig0023238:+46724 Msa1406670:CDS
GCTACAGTTGTTGATGCAGG+AGG 0.672632 tig0023238:-45844 None:intergenic
TGTGCAAATGGAGGACAAGG+AGG 0.682903 tig0023238:-45511 None:intergenic
AGATGAGGAAAGGCCAACGA+CGG 0.690777 tig0023238:+44910 Msa1406670:CDS
AAACAATACAGACACCAAGA+GGG 0.691284 tig0023238:-46840 None:intergenic
AAACACACACAAAAGAACGA+TGG 0.697228 tig0023238:+45169 Msa1406670:CDS
GTTTGTACAAAATAACAATG+AGG 0.699011 tig0023238:+46578 Msa1406670:CDS
TCGGGCTCTATTCTCCAGAG+AGG 0.699278 tig0023238:+46431 Msa1406670:CDS
AGTATTAACAGTCCTCAAGG+AGG 0.725209 tig0023238:+44964 Msa1406670:CDS
GCCGAAGATACAGATGAACA+GGG 0.736992 tig0023238:-44989 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTTATTAGAAAAGA+AGG - tig0023238:37044-37063 None:intergenic 10.0%
!! TAAAATATTATGTTGAAAAA+TGG + tig0023238:38179-38198 Msa1406670:intron 10.0%
!! AAAAAATTAAATGAATTTGT+TGG + tig0023238:38280-38299 Msa1406670:intron 10.0%
!!! AAAAATTAAATGAATTTGTT+GGG + tig0023238:38281-38300 Msa1406670:intron 10.0%
!! ATAAATAATATAATCTTCTT+AGG - tig0023238:38583-38602 None:intergenic 10.0%
!!! TTTGAATATTTTGTTATTAT+TGG + tig0023238:40967-40986 Msa1406670:intron 10.0%
!! TAAAAAAATAGAAAAATAAG+TGG + tig0023238:41931-41950 Msa1406670:intron 10.0%
!! AAAAAAATAGAAAAATAAGT+GGG + tig0023238:41932-41951 Msa1406670:intron 10.0%
!! TATTAAATATACAACTTATA+TGG + tig0023238:43772-43791 Msa1406670:intron 10.0%
!!! AAACTTTTTCTTATTTCTAT+TGG + tig0023238:37875-37894 Msa1406670:intron 15.0%
!!! AACTTTTTCTTATTTCTATT+GGG + tig0023238:37876-37895 Msa1406670:intron 15.0%
!!! AAAATTAAATGAATTTGTTG+GGG + tig0023238:38282-38301 Msa1406670:intron 15.0%
!! AAGATAAACAATAAAATGAA+AGG - tig0023238:39790-39809 None:intergenic 15.0%
!!! TTTTTTTTTTTTGTGTAAAC+CGG + tig0023238:40038-40057 Msa1406670:intron 15.0%
!! AATAACAAAATATTCAAAAG+TGG - tig0023238:40965-40984 None:intergenic 15.0%
!!! TATTTTTTTATTTTCTTCAC+AGG + tig0023238:42189-42208 Msa1406670:intron 15.0%
!!! TGTCATTTTATATTTACAAA+AGG + tig0023238:42230-42249 Msa1406670:intron 15.0%
!! TATATAATATATATTCTCAG+TGG - tig0023238:42756-42775 None:intergenic 15.0%
!! TTATATAAACAAAAGTTTGT+AGG + tig0023238:42769-42788 Msa1406670:intron 15.0%
!! AAAAAATGTAAATCATATGA+AGG - tig0023238:42989-43008 None:intergenic 15.0%
!!! CAATTATTTTCTCAAATTTA+AGG - tig0023238:43426-43445 None:intergenic 15.0%
!! AAGAATTAAACATGAATTTA+GGG - tig0023238:43910-43929 None:intergenic 15.0%
!! TTATTTGAAAATCACTAATT+GGG - tig0023238:44519-44538 None:intergenic 15.0%
!! TTTATTTGAAAATCACTAAT+TGG - tig0023238:44520-44539 None:intergenic 15.0%
!!! GTATTGTTTATTTTCTAATT+CGG + tig0023238:46854-46873 Msa1406670:three_prime_UTR 15.0%
!!! AATATGTTTTATAAACATGT+CGG + tig0023238:47135-47154 Msa1406670:three_prime_UTR 15.0%
!! AATACAATACATATGTATAT+TGG - tig0023238:47180-47199 None:intergenic 15.0%
!! AATATACATATGTATTGTAT+TGG + tig0023238:47179-47198 Msa1406670:three_prime_UTR 15.0%
!! ATATACATATGTATTGTATT+GGG + tig0023238:47180-47199 Msa1406670:three_prime_UTR 15.0%
!! TATTTAGATCAGAATCAAAA+AGG - tig0023238:36903-36922 None:intergenic 20.0%
!! TTGATTGATTGATTAAGAAA+TGG - tig0023238:37524-37543 None:intergenic 20.0%
!! TTCAGATATCTTATCTTATT+AGG + tig0023238:37712-37731 Msa1406670:intron 20.0%
!! AAAAAGTTTGAGCATAAATT+AGG - tig0023238:37864-37883 None:intergenic 20.0%
!!! TTTTAATATTGAAGAAACTG+TGG - tig0023238:38164-38183 None:intergenic 20.0%
!!! AAATTAAATGAATTTGTTGG+GGG + tig0023238:38283-38302 Msa1406670:intron 20.0%
!! ACAATATCGGTATAATATAA+GGG - tig0023238:38429-38448 None:intergenic 20.0%
!! AACAATATCGGTATAATATA+AGG - tig0023238:38430-38449 None:intergenic 20.0%
!!! TGGTGTTACAAAAAAAAAAA+AGG + tig0023238:39181-39200 Msa1406670:intron 20.0%
!!! ATTTTTCAAATGTATGTTTG+TGG + tig0023238:39435-39454 Msa1406670:intron 20.0%
!!! TTTTTCAAATGTATGTTTGT+GGG + tig0023238:39436-39455 Msa1406670:intron 20.0%
!! TATCATGTATGTAATTCTAT+AGG - tig0023238:39715-39734 None:intergenic 20.0%
!! GGTTTACACAAAAAAAAAAA+AGG - tig0023238:40039-40058 None:intergenic 20.0%
!!! TTTTTTTTTTTGTGTAAACC+GGG + tig0023238:40039-40058 Msa1406670:intron 20.0%
!! ATAAATGATTTCATCCATAT+GGG - tig0023238:40177-40196 None:intergenic 20.0%
!! TATAAATGATTTCATCCATA+TGG - tig0023238:40178-40197 None:intergenic 20.0%
!! ATCACTGAAAATTGTAAAAT+CGG - tig0023238:40318-40337 None:intergenic 20.0%
!! TATCATATGTATGAAGATAA+AGG + tig0023238:40877-40896 Msa1406670:intron 20.0%
!!! GAATATTTTGTTATTATTGG+AGG + tig0023238:40970-40989 Msa1406670:intron 20.0%
!! AATAAACCTACAATTGAAAT+TGG + tig0023238:41103-41122 Msa1406670:intron 20.0%
!! ATAAACCTACAATTGAAATT+GGG + tig0023238:41104-41123 Msa1406670:intron 20.0%
!!! CAAAAAGGTAATTTTAATAC+TGG + tig0023238:41578-41597 Msa1406670:intron 20.0%
!! ATATTAAATGACTAAATGAC+AGG - tig0023238:41911-41930 None:intergenic 20.0%
!!! TGTTTATACTTTTTAGAGAT+TGG - tig0023238:42332-42351 None:intergenic 20.0%
!! AGACAAGATTAGAAAATAAA+AGG - tig0023238:42560-42579 None:intergenic 20.0%
!!! CTAAAAAGCCTTATAATAAA+AGG - tig0023238:43857-43876 None:intergenic 20.0%
!! AGAATTAAACATGAATTTAG+GGG - tig0023238:43909-43928 None:intergenic 20.0%
!! GAAGAATTAAACATGAATTT+AGG - tig0023238:43911-43930 None:intergenic 20.0%
!! TAACTAGATAAAACAATCAT+GGG - tig0023238:43977-43996 None:intergenic 20.0%
!! ATAACTAGATAAAACAATCA+TGG - tig0023238:43978-43997 None:intergenic 20.0%
!!! TGATTGTTTTATCTAGTTAT+CGG + tig0023238:43978-43997 Msa1406670:intron 20.0%
!!! GAAAAGAGATACATTTTTAT+TGG - tig0023238:44236-44255 None:intergenic 20.0%
!! TGAAATTGACTATAGTTTAA+TGG - tig0023238:44258-44277 None:intergenic 20.0%
!! TATTTGAAAATCACTAATTG+GGG - tig0023238:44518-44537 None:intergenic 20.0%
!!! TTAAAACTTTTACTTTCAGT+TGG + tig0023238:44570-44589 Msa1406670:intron 20.0%
!! AAGTGAAAATCAAAATAACA+TGG + tig0023238:45462-45481 Msa1406670:CDS 20.0%
!!! TGTTTACTAATATTTGTTGA+TGG - tig0023238:45871-45890 None:intergenic 20.0%
!! TAAGTTAAATACTTCATCAA+AGG + tig0023238:46047-46066 Msa1406670:CDS 20.0%
!! GTTTATATCAAGATTAATAG+TGG - tig0023238:46073-46092 None:intergenic 20.0%
!!! TCATTGTTATTTTGTACAAA+CGG - tig0023238:46579-46598 None:intergenic 20.0%
! ATAAAATACTCAGATTCATC+CGG + tig0023238:36924-36943 Msa1406670:five_prime_UTR 25.0%
! AACATGACTTTATTATCCAA+AGG + tig0023238:36996-37015 Msa1406670:five_prime_UTR 25.0%
! TATTAGAAAAGAAGGAAAAG+AGG - tig0023238:37036-37055 None:intergenic 25.0%
!!! TTACTTTTTCAATACAGAGA+CGG + tig0023238:37263-37282 Msa1406670:intron 25.0%
!!! CTTTGTTTTGTGATTGTATA+TGG - tig0023238:37599-37618 None:intergenic 25.0%
! TCTATATAATTCCTGTTCAA+AGG + tig0023238:38041-38060 Msa1406670:intron 25.0%
!! ATTAATGATCGTTTAAAACC+AGG - tig0023238:38232-38251 None:intergenic 25.0%
!! GTATAATATAAGGGTATGAT+TGG - tig0023238:38420-38439 None:intergenic 25.0%
! TACAAGTACGAAAACAATAT+CGG - tig0023238:38442-38461 None:intergenic 25.0%
! AGCATCAAATAGTTATAACA+TGG + tig0023238:38469-38488 Msa1406670:intron 25.0%
! CCTACTATGTGATTAAAAAA+AGG - tig0023238:38498-38517 None:intergenic 25.0%
!!! CCTTTTTTTAATCACATAGT+AGG + tig0023238:38495-38514 Msa1406670:intron 25.0%
! AGTAAAAAAGGATTGAAACT+AGG - tig0023238:39111-39130 None:intergenic 25.0%
!!! TCAATCCTTTTTTACTTTGT+AGG + tig0023238:39115-39134 Msa1406670:intron 25.0%
!!! CAATCCTTTTTTACTTTGTA+GGG + tig0023238:39116-39135 Msa1406670:intron 25.0%
! ATTACCCTACAAAGTAAAAA+AGG - tig0023238:39123-39142 None:intergenic 25.0%
!! TTTGTAACACCATTCTTTTA+TGG - tig0023238:39173-39192 None:intergenic 25.0%
!! ACAATATATAGTTGATGTTG+AGG - tig0023238:39499-39518 None:intergenic 25.0%
!! TTTGAAATTTAATCCATTGC+TGG - tig0023238:39669-39688 None:intergenic 25.0%
!! TAAAATGAAAGGTACAAACA+TGG - tig0023238:39779-39798 None:intergenic 25.0%
! TCACTGAAAATTGTAAAATC+GGG - tig0023238:40317-40336 None:intergenic 25.0%
! AATGCCAAATCTTATTAATG+CGG - tig0023238:40420-40439 None:intergenic 25.0%
! TAATAAGATTTGGCATTTAC+AGG + tig0023238:40423-40442 Msa1406670:intron 25.0%
! ATACAATAGGAATATCAATG+GGG - tig0023238:40706-40725 None:intergenic 25.0%
! CATACAATAGGAATATCAAT+GGG - tig0023238:40707-40726 None:intergenic 25.0%
!! TACTCTTGCTATAATTAGAA+GGG + tig0023238:41344-41363 Msa1406670:intron 25.0%
!! TACATATATTCCCTCTAAAA+TGG - tig0023238:41723-41742 None:intergenic 25.0%
! TAAAGTTGCATGACATAAAA+TGG - tig0023238:41753-41772 None:intergenic 25.0%
!!! TCTCTTTTTTCCTCTAAAAT+GGG - tig0023238:42150-42169 None:intergenic 25.0%
!!! ATCTCTTTTTTCCTCTAAAA+TGG - tig0023238:42151-42170 None:intergenic 25.0%
!!! ATTTTAGAGGAAAAAAGAGA+TGG + tig0023238:42150-42169 Msa1406670:intron 25.0%
!!! ACAAGTTCTAAGATATTTGA+TGG - tig0023238:42305-42324 None:intergenic 25.0%
! GACACTTATTAAGGAAAAAA+AGG - tig0023238:42380-42399 None:intergenic 25.0%
! AAAAAACATGTCATGCTAAT+TGG - tig0023238:42411-42430 None:intergenic 25.0%
! CAAGATTAGAAAATAAAAGG+AGG - tig0023238:42557-42576 None:intergenic 25.0%
! ATAATATATATTCTCAGTGG+CGG - tig0023238:42753-42772 None:intergenic 25.0%
! AAGGCTGTAAAAATGAATAA+GGG - tig0023238:42846-42865 None:intergenic 25.0%
! AAAGGCTGTAAAAATGAATA+AGG - tig0023238:42847-42866 None:intergenic 25.0%
! TCACTCATTTCAAAAAACTA+TGG - tig0023238:43044-43063 None:intergenic 25.0%
! AGAGAAGTTGAACAAAAAAA+GGG - tig0023238:43246-43265 None:intergenic 25.0%
! TAGAGAAGTTGAACAAAAAA+AGG - tig0023238:43247-43266 None:intergenic 25.0%
!!! TATACTGTTAACTGCTTTTA+GGG + tig0023238:43574-43593 Msa1406670:intron 25.0%
!!! TTTATTTTTTTACTGCTGAC+TGG + tig0023238:43626-43645 Msa1406670:intron 25.0%
! AGGTTAACTAGTAATCATAA+AGG + tig0023238:43654-43673 Msa1406670:intron 25.0%
! GGTTAACTAGTAATCATAAA+GGG + tig0023238:43655-43674 Msa1406670:intron 25.0%
!! CATAACCTCCTTTTATTATA+AGG + tig0023238:43846-43865 Msa1406670:intron 25.0%
!! AAAAGCCTTATAATAAAAGG+AGG - tig0023238:43854-43873 None:intergenic 25.0%
!! TAAGGCTTTTTAGATCTAAA+TGG + tig0023238:43864-43883 Msa1406670:intron 25.0%
!! TTCCATATAACTGTATTTTC+TGG + tig0023238:44158-44177 Msa1406670:intron 25.0%
! TTATAGACTCTAATGATGTA+GGG - tig0023238:44209-44228 None:intergenic 25.0%
! ATTATAGACTCTAATGATGT+AGG - tig0023238:44210-44229 None:intergenic 25.0%
!! GATTTCTTTTCGTAATTTGA+TGG + tig0023238:44323-44342 Msa1406670:intron 25.0%
!! GTACATTTTCTTAAATGTCT+TGG + tig0023238:44356-44375 Msa1406670:intron 25.0%
!! CTTTGACTTAAAACCATTTA+TGG + tig0023238:44388-44407 Msa1406670:intron 25.0%
! AGTTTATTCTGCTATATAGT+TGG + tig0023238:44423-44442 Msa1406670:intron 25.0%
!!! CTACACATTCCTTATTTTTT+AGG + tig0023238:44880-44899 Msa1406670:intron 25.0%
! CTTTATGCTCCTAAAAAATA+AGG - tig0023238:44892-44911 None:intergenic 25.0%
!! TGAATCAACATATTTTGTGA+TGG - tig0023238:45367-45386 None:intergenic 25.0%
! TTATTTATCAAATCATGAGG+AGG - tig0023238:46477-46496 None:intergenic 25.0%
! TCCTCATGATTTGATAAATA+AGG + tig0023238:46476-46495 Msa1406670:CDS 25.0%
!! TCCTTATTTATCAAATCATG+AGG - tig0023238:46480-46499 None:intergenic 25.0%
! GATAAATAAGGATAATCAGA+TGG + tig0023238:46488-46507 Msa1406670:CDS 25.0%
! GTTTGTACAAAATAACAATG+AGG + tig0023238:46578-46597 Msa1406670:CDS 25.0%
!! TCTACTAAACATCTTTTGTA+AGG - tig0023238:46666-46685 None:intergenic 25.0%
! TTACAAAAGATGTTTAGTAG+AGG + tig0023238:46665-46684 Msa1406670:CDS 25.0%
! ACGTAGGTAGTAATTTAATA+TGG - tig0023238:46913-46932 None:intergenic 25.0%
! CAATCTAAGTAACTTTGTAA+TGG - tig0023238:47112-47131 None:intergenic 25.0%
!! TTATAAACATGTCGGTATTT+TGG + tig0023238:47143-47162 Msa1406670:three_prime_UTR 25.0%
! AGTAAGTAAGTAAGTTGAGA+AGG - tig0023238:36841-36860 None:intergenic 30.0%
AAGTGTGAATTCAACATATC+CGG - tig0023238:36946-36965 None:intergenic 30.0%
! GTTATTTCAACTTCTCATTC+AGG + tig0023238:37075-37094 Msa1406670:intron 30.0%
GCAAAAGAAACAGAAAGAAT+AGG - tig0023238:37296-37315 None:intergenic 30.0%
! TTGAAAAGAATTTTTGCGCA+TGG - tig0023238:37815-37834 None:intergenic 30.0%
! TGCGCAAAAATTCTTTTCAA+AGG + tig0023238:37815-37834 Msa1406670:CDS 30.0%
! AATTCTTTTCAAAGGTCGAT+TGG + tig0023238:37823-37842 Msa1406670:intron 30.0%
AAGTTTGAGCATAAATTAGG+AGG - tig0023238:37861-37880 None:intergenic 30.0%
TTTCTTATTACTCAATGTGC+AGG - tig0023238:38316-38335 None:intergenic 30.0%
GCACATTGAGTAATAAGAAA+TGG + tig0023238:38316-38335 Msa1406670:intron 30.0%
TTTAATCACATAGTAGGTGA+TGG + tig0023238:38501-38520 Msa1406670:intron 30.0%
TAATAAGACTCAAAACATGG+CGG - tig0023238:38559-38578 None:intergenic 30.0%
GGATAATAAGACTCAAAACA+TGG - tig0023238:38562-38581 None:intergenic 30.0%
TATCTCTAAGTTGCATTTCT+TGG - tig0023238:38739-38758 None:intergenic 30.0%
TCACTTATAAACATCTATCC+AGG - tig0023238:39005-39024 None:intergenic 30.0%
TGGATAGATGTTTATAAGTG+AGG + tig0023238:39004-39023 Msa1406670:intron 30.0%
GGATAGATGTTTATAAGTGA+GGG + tig0023238:39005-39024 Msa1406670:intron 30.0%
AAAAAAAAGGAATCAACACC+TGG + tig0023238:39194-39213 Msa1406670:intron 30.0%
! GTTGATAAGATAACCTATTG+AGG - tig0023238:39271-39290 None:intergenic 30.0%
!! TCTAGGTAAAGATTAGCTTT+GGG + tig0023238:39410-39429 Msa1406670:intron 30.0%
! AAAAACAACAATAGCCCTTT+TGG - tig0023238:39474-39493 None:intergenic 30.0%
AAATTTAATCCATTGCTGGT+AGG - tig0023238:39665-39684 None:intergenic 30.0%
TGTAATTCTATAGGAAGTTC+AGG - tig0023238:39706-39725 None:intergenic 30.0%
CTAGATGATGTTAGATGAAA+TGG + tig0023238:39893-39912 Msa1406670:intron 30.0%
!!! AAGACTGCAATTGGTTTTAT+AGG + tig0023238:39963-39982 Msa1406670:intron 30.0%
!!! AGACTGCAATTGGTTTTATA+GGG + tig0023238:39964-39983 Msa1406670:intron 30.0%
AAAATTGTAAAATCGGGACT+CGG - tig0023238:40311-40330 None:intergenic 30.0%
GCTATCTCTTCAAATAGTTT+CGG + tig0023238:40563-40582 Msa1406670:intron 30.0%
ATAGTTTCGGATTAAAGACA+TGG + tig0023238:40576-40595 Msa1406670:intron 30.0%
! GAATTTTTCCAATTCTCCTA+TGG + tig0023238:40624-40643 Msa1406670:intron 30.0%
CCATACAATAGGAATATCAA+TGG - tig0023238:40708-40727 None:intergenic 30.0%
CCATTGATATTCCTATTGTA+TGG + tig0023238:40705-40724 Msa1406670:intron 30.0%
! CGTAATGTCAAACTTCTTTT+GGG + tig0023238:40730-40749 Msa1406670:intron 30.0%
GCATTTAGGAACTAGATAAA+AGG - tig0023238:40843-40862 None:intergenic 30.0%
! ATCTAGTTCCTAAATGCTTA+TGG + tig0023238:40846-40865 Msa1406670:intron 30.0%
TTCCTAAATGCTTATGGATA+AGG + tig0023238:40852-40871 Msa1406670:intron 30.0%
GGAAGATGAATAATGTGAAA+TGG + tig0023238:41047-41066 Msa1406670:intron 30.0%
TGTGTAAACATACATGACTA+GGG + tig0023238:41079-41098 Msa1406670:intron 30.0%
TATCTCCCAATTTCAATTGT+AGG - tig0023238:41112-41131 None:intergenic 30.0%
!!! TTTTATTTTCTAGCTACCTC+AGG + tig0023238:41320-41339 Msa1406670:intron 30.0%
!!! TTTATTTTCTAGCTACCTCA+GGG + tig0023238:41321-41340 Msa1406670:intron 30.0%
! GTACTCTTGCTATAATTAGA+AGG + tig0023238:41343-41362 Msa1406670:intron 30.0%
TCAAAGTAGAAACTTTGTCT+TGG - tig0023238:41444-41463 None:intergenic 30.0%
CATTTCCCTTAGAATATACA+GGG + tig0023238:41504-41523 Msa1406670:intron 30.0%
ATTTCCCTTAGAATATACAG+GGG + tig0023238:41505-41524 Msa1406670:intron 30.0%
! TTTTGTACAAAAGTTTGTGG+AGG - tig0023238:41563-41582 None:intergenic 30.0%
! CCTTTTTGTACAAAAGTTTG+TGG - tig0023238:41566-41585 None:intergenic 30.0%
! CCACAAACTTTTGTACAAAA+AGG + tig0023238:41563-41582 Msa1406670:intron 30.0%
CATGAAAGTTTGGAAGATAA+AGG - tig0023238:41610-41629 None:intergenic 30.0%
TTCCAAACTTTCATGAACAT+AGG + tig0023238:41615-41634 Msa1406670:intron 30.0%
ATGAACATAGGCAGATAAAA+TGG + tig0023238:41627-41646 Msa1406670:intron 30.0%
! TTTTTAATCCCCCATTTTAG+AGG + tig0023238:42137-42156 Msa1406670:intron 30.0%
!!! TCTTTTTTCCTCTAAAATGG+GGG - tig0023238:42148-42167 None:intergenic 30.0%
!!! CTCTTTTTTCCTCTAAAATG+GGG - tig0023238:42149-42168 None:intergenic 30.0%
TAGAAAATAAAAGGAGGAGA+AGG - tig0023238:42551-42570 None:intergenic 30.0%
! GGAATCTAGAGTAGAATAAA+GGG - tig0023238:42598-42617 None:intergenic 30.0%
! AGGAATCTAGAGTAGAATAA+AGG - tig0023238:42599-42618 None:intergenic 30.0%
TCTTAGAAAATCAGTAATGG+AGG - tig0023238:42619-42638 None:intergenic 30.0%
!!! TCCATTACTGATTTTCTAAG+AGG + tig0023238:42618-42637 Msa1406670:intron 30.0%
ACCTCTTAGAAAATCAGTAA+TGG - tig0023238:42622-42641 None:intergenic 30.0%
ATGTTCGAACTTTGTAACTT+AGG + tig0023238:42929-42948 Msa1406670:intron 30.0%
TGTGAAAGATATACAAGTCT+TGG + tig0023238:42962-42981 Msa1406670:intron 30.0%
GTGAAAGATATACAAGTCTT+GGG + tig0023238:42963-42982 Msa1406670:intron 30.0%
CAATATAGGCACCAATAAAA+GGG - tig0023238:43070-43089 None:intergenic 30.0%
TCAATATAGGCACCAATAAA+AGG - tig0023238:43071-43090 None:intergenic 30.0%
AGAAAAAAGTGATACAAGAG+AGG + tig0023238:43170-43189 Msa1406670:intron 30.0%
GAAAAAAGTGATACAAGAGA+GGG + tig0023238:43171-43190 Msa1406670:intron 30.0%
AAAAAAGTGATACAAGAGAG+GGG + tig0023238:43172-43191 Msa1406670:intron 30.0%
AAGCAATCAAATTGACTACT+TGG - tig0023238:43209-43228 None:intergenic 30.0%
AAGTAGTCAATTTGATTGCT+TGG + tig0023238:43208-43227 Msa1406670:intron 30.0%
AGAAGTTGAACAAAAAAAGG+GGG - tig0023238:43244-43263 None:intergenic 30.0%
GAGAAGTTGAACAAAAAAAG+GGG - tig0023238:43245-43264 None:intergenic 30.0%
! CTAATCAAGTTTTCCAATCA+TGG - tig0023238:43515-43534 None:intergenic 30.0%
GCAATGTCTTGAACAAATTA+TGG - tig0023238:43546-43565 None:intergenic 30.0%
! TTTGTTCAAGACATTGCTTT+TGG + tig0023238:43549-43568 Msa1406670:intron 30.0%
!! TTGTTCAAGACATTGCTTTT+GGG + tig0023238:43550-43569 Msa1406670:intron 30.0%
!! GTATACTGTTAACTGCTTTT+AGG + tig0023238:43573-43592 Msa1406670:intron 30.0%
AACTAGTAATCATAAAGGGA+AGG + tig0023238:43659-43678 Msa1406670:intron 30.0%
GATAGAAGAATTGTTATGCT+TGG + tig0023238:43720-43739 Msa1406670:intron 30.0%
TTATATGGATAGTCATCTCA+TGG + tig0023238:43787-43806 Msa1406670:intron 30.0%
TATATGGATAGTCATCTCAT+GGG + tig0023238:43788-43807 Msa1406670:intron 30.0%
CTTCTGCAAATCATGATATA+TGG + tig0023238:44114-44133 Msa1406670:intron 30.0%
AACAAGTAAGGTCAATCATA+TGG - tig0023238:44140-44159 None:intergenic 30.0%
ACAGTTATATGGAACAAGTA+AGG - tig0023238:44152-44171 None:intergenic 30.0%
AGCCAGAAAATACAGTTATA+TGG - tig0023238:44163-44182 None:intergenic 30.0%
!!! TATAACTGTATTTTCTGGCT+TGG + tig0023238:44163-44182 Msa1406670:intron 30.0%
TACGAAAAGAAATCACGTAT+AGG - tig0023238:44317-44336 None:intergenic 30.0%
TGTGAAGTATACTCCATAAA+TGG - tig0023238:44404-44423 None:intergenic 30.0%
TGCTATATAGTTGGAATCAT+TGG + tig0023238:44432-44451 Msa1406670:intron 30.0%
!!! GTTTTAAGAGTATACTCAGT+GGG - tig0023238:44557-44576 None:intergenic 30.0%
!!! AGTTTTAAGAGTATACTCAG+TGG - tig0023238:44558-44577 None:intergenic 30.0%
!! TTTTTAGGAGCATAAAGATG+AGG + tig0023238:44895-44914 Msa1406670:intron 30.0%
! TTATTTTCTTTTACCGTCGT+TGG - tig0023238:44926-44945 None:intergenic 30.0%
!! AAAAGTATTAACAGTCCTCA+AGG + tig0023238:44961-44980 Msa1406670:CDS 30.0%
GAAGATTCTACATTTGCATA+CGG - tig0023238:45658-45677 None:intergenic 30.0%
AGAATGTAAAATACCTGATG+CGG + tig0023238:46227-46246 Msa1406670:CDS 30.0%
!!! TTATGTCAGCGTTTTTTACA+GGG + tig0023238:46396-46415 Msa1406670:intron 30.0%
!!! TGTTATTTTGTACAAACGGT+AGG - tig0023238:46575-46594 None:intergenic 30.0%
TGTACAAAATAACAATGAGG+AGG + tig0023238:46581-46600 Msa1406670:CDS 30.0%
GTACAAAATAACAATGAGGA+GGG + tig0023238:46582-46601 Msa1406670:CDS 30.0%
!! ATTTTTAACTGCAGTAGCAT+CGG - tig0023238:46953-46972 None:intergenic 30.0%
!!! CTTCTCTAAGGCTATTTTAT+CGG - tig0023238:46977-46996 None:intergenic 30.0%
TACTTCATGTTTCTTCTCTA+AGG - tig0023238:46989-47008 None:intergenic 30.0%
! TTGTGTTCTTTCACTCATTT+TGG + tig0023238:47224-47243 Msa1406670:three_prime_UTR 30.0%
TTGTGTTGTGATGTAGTTGT+TGG + tig0023238:36797-36816 Msa1406670:five_prime_UTR 35.0%
! AGTAAGTAAGTTGAGAAGGA+AGG - tig0023238:36837-36856 None:intergenic 35.0%
GATAAGATACAGTTTGTAGC+AGG - tig0023238:36875-36894 None:intergenic 35.0%
GGAAAGTAAGTAAGTACCTT+TGG - tig0023238:37015-37034 None:intergenic 35.0%
!! TCAACTTCTCATTCAGGTTT+TGG + tig0023238:37081-37100 Msa1406670:intron 35.0%
! GAGTTGATCTCTATATGTTG+CGG + tig0023238:37137-37156 Msa1406670:intron 35.0%
AAATAGTAAGAAGGAGTGGT+TGG - tig0023238:37336-37355 None:intergenic 35.0%
TCACAAAACAAAGAGAACGT+TGG + tig0023238:37606-37625 Msa1406670:CDS 35.0%
TATATGTTCTGCATGAGCAA+GGG - tig0023238:37763-37782 None:intergenic 35.0%
ATAAATTAGGAGGTGAGAGA+GGG - tig0023238:37851-37870 None:intergenic 35.0%
! GAGTCTTATCTATCTGATGT+GGG - tig0023238:37915-37934 None:intergenic 35.0%
! AGAGTCTTATCTATCTGATG+TGG - tig0023238:37916-37935 None:intergenic 35.0%
!! GAGCAGTATTGTTGGTTTAT+TGG + tig0023238:37980-37999 Msa1406670:intron 35.0%
TTATTGGTCACGAATCAGTT+AGG + tig0023238:37996-38015 Msa1406670:intron 35.0%
ACTACTTGATACCTTTGAAC+AGG - tig0023238:38055-38074 None:intergenic 35.0%
!! TCAAAGGTATCAAGTAGTTC+TGG + tig0023238:38057-38076 Msa1406670:intron 35.0%
!! CAAAGGTATCAAGTAGTTCT+GGG + tig0023238:38058-38077 Msa1406670:intron 35.0%
!! AAAGGTATCAAGTAGTTCTG+GGG + tig0023238:38059-38078 Msa1406670:intron 35.0%
AACAATCTGACCAACTTTCT+TGG + tig0023238:38110-38129 Msa1406670:intron 35.0%
TTGAGTTTCACCAAGAAAGT+TGG - tig0023238:38123-38142 None:intergenic 35.0%
AACAAGTAGTGATGCAACTT+GGG - tig0023238:38649-38668 None:intergenic 35.0%
TAACAAGTAGTGATGCAACT+TGG - tig0023238:38650-38669 None:intergenic 35.0%
! CTTGTTATGCTTTGCCTAAA+AGG + tig0023238:38663-38682 Msa1406670:intron 35.0%
! ATTGATATTGCAAGAGCATG+TGG - tig0023238:38849-38868 None:intergenic 35.0%
!! ACCACAAATTCTAAGACATG+CGG + tig0023238:39074-39093 Msa1406670:intron 35.0%
GATAAGATAACCTATTGAGG+AGG - tig0023238:39268-39287 None:intergenic 35.0%
AGATCTTGTTGGGGATATAA+TGG - tig0023238:39336-39355 None:intergenic 35.0%
!! CTCTAGGTAAAGATTAGCTT+TGG + tig0023238:39409-39428 Msa1406670:intron 35.0%
GGTTACTCATACATCCAAAA+GGG + tig0023238:39457-39476 Msa1406670:intron 35.0%
! AAGGGGGAAGTCTAAAATAA+TGG - tig0023238:39533-39552 None:intergenic 35.0%
ACTTGATGCCAATTTCATTG+TGG + tig0023238:39571-39590 Msa1406670:intron 35.0%
ATTACACTCCAATGACACTT+GGG + tig0023238:39920-39939 Msa1406670:intron 35.0%
AAACCAATTGCAGTCTTAGA+AGG - tig0023238:39960-39979 None:intergenic 35.0%
ATAGTGATTGTCAGATCTTG+TGG + tig0023238:40008-40027 Msa1406670:intron 35.0%
TAGTGATTGTCAGATCTTGT+GGG + tig0023238:40009-40028 Msa1406670:intron 35.0%
ACCAGTGTTAAATCTCTTGA+GGG - tig0023238:40134-40153 None:intergenic 35.0%
GATTTCATCCATATGGGAAA+AGG - tig0023238:40171-40190 None:intergenic 35.0%
! TGAATAGACCAGTTGATACA+TGG - tig0023238:40223-40242 None:intergenic 35.0%
TCACTAGCTGGATATTAGAA+AGG + tig0023238:40240-40259 Msa1406670:intron 35.0%
AAATTGTAAAATCGGGACTC+GGG - tig0023238:40310-40329 None:intergenic 35.0%
AGCTCCGCATTAATAAGATT+TGG + tig0023238:40413-40432 Msa1406670:intron 35.0%
TTCTCCATTCATTCTCCTTT+CGG + tig0023238:40467-40486 Msa1406670:intron 35.0%
GTCCTCTCAAATACTTCTTA+GGG + tig0023238:40598-40617 Msa1406670:intron 35.0%
!! ATCCCTAAGAAGTATTTGAG+AGG - tig0023238:40603-40622 None:intergenic 35.0%
ACATTCAGAGCATACTTTGT+CGG - tig0023238:40653-40672 None:intergenic 35.0%
! GCGTAATGTCAAACTTCTTT+TGG + tig0023238:40729-40748 Msa1406670:intron 35.0%
GGAAGATATTTGCATCTTGT+GGG + tig0023238:40779-40798 Msa1406670:intron 35.0%
GTCCTTATCCATAAGCATTT+AGG - tig0023238:40857-40876 None:intergenic 35.0%
AACAGAGTGACAAGTTACTT+TGG - tig0023238:40908-40927 None:intergenic 35.0%
TAGGATCACCATCAAATATG+AGG + tig0023238:40938-40957 Msa1406670:intron 35.0%
AAAGTGGACCTCATATTTGA+TGG - tig0023238:40949-40968 None:intergenic 35.0%
GTGTGTAAACATACATGACT+AGG + tig0023238:41078-41097 Msa1406670:intron 35.0%
!! AAGCAGACTTGCTATTTGTT+TGG - tig0023238:41209-41228 None:intergenic 35.0%
TTCCTTAACAAGTGCCTTAA+GGG + tig0023238:41465-41484 Msa1406670:intron 35.0%
GCATTTCCCTTAGAATATAC+AGG + tig0023238:41503-41522 Msa1406670:intron 35.0%
TGCCTATGTTCATGAAAGTT+TGG - tig0023238:41620-41639 None:intergenic 35.0%
TATTCCTCAATCAACGTTGA+CGG + tig0023238:41659-41678 Msa1406670:intron 35.0%
!!! ATACCTCATGCCATTTTAGA+GGG + tig0023238:41710-41729 Msa1406670:intron 35.0%
AACCCAACCCAAAAATTAGT+GGG + tig0023238:41973-41992 Msa1406670:intron 35.0%
!!! AACCCACTAATTTTTGGGTT+GGG - tig0023238:41978-41997 None:intergenic 35.0%
! TTATACTATTGGGTGGGTTT+GGG - tig0023238:42003-42022 None:intergenic 35.0%
AAACCCACCCAATAGTATAA+CGG + tig0023238:42003-42022 Msa1406670:intron 35.0%
TAACCACCCGTTATACTATT+GGG - tig0023238:42013-42032 None:intergenic 35.0%
ATAACCACCCGTTATACTAT+TGG - tig0023238:42014-42033 None:intergenic 35.0%
!! TTATTTTACCTCACCCAAAC+CGG + tig0023238:42030-42049 Msa1406670:intron 35.0%
AAATGTCTATGATGTGCGTA+GGG - tig0023238:42118-42137 None:intergenic 35.0%
AAAATGTCTATGATGTGCGT+AGG - tig0023238:42119-42138 None:intergenic 35.0%
AGAGGAAAAAAGAGATGGAT+TGG + tig0023238:42155-42174 Msa1406670:intron 35.0%
GTGTTCTTGGACACTTATTA+AGG - tig0023238:42389-42408 None:intergenic 35.0%
CATGCTATGCATCAAAAAAG+TGG + tig0023238:42456-42475 Msa1406670:intron 35.0%
TGAGTTTAGTATCGTTTCCT+TGG - tig0023238:42506-42525 None:intergenic 35.0%
AGCCAGAAATAATCGTTAGT+GGG - tig0023238:42730-42749 None:intergenic 35.0%
! ATGAGTGATCACCCTTTTAT+TGG + tig0023238:43056-43075 Msa1406670:intron 35.0%
TCTCCTCATCTTGTCAATAT+AGG - tig0023238:43084-43103 None:intergenic 35.0%
TGCCTATCTTCATTCATTTG+CGG - tig0023238:43126-43145 None:intergenic 35.0%
AAAAAGTGATACAAGAGAGG+GGG + tig0023238:43173-43192 Msa1406670:intron 35.0%
GAAGTTGAACAAAAAAAGGG+GGG - tig0023238:43243-43262 None:intergenic 35.0%
!! TGTTCAAGACATTGCTTTTG+GGG + tig0023238:43551-43570 Msa1406670:intron 35.0%
!!! TTTTAGGGTATACTGTTGAC+TGG + tig0023238:43589-43608 Msa1406670:intron 35.0%
! TTTACTGCTGACTGGATATA+AGG + tig0023238:43634-43653 Msa1406670:intron 35.0%
ACACACATGACATCAAAGTT+GGG - tig0023238:43699-43718 None:intergenic 35.0%
ATATGGATAGTCATCTCATG+GGG + tig0023238:43789-43808 Msa1406670:intron 35.0%
GAGGTTATGAAATCCAGAAA+AGG - tig0023238:43835-43854 None:intergenic 35.0%
TGGGTTCAGAACAAACATAT+TGG - tig0023238:43958-43977 None:intergenic 35.0%
TTCGATTCCTATCAAAGTTC+CGG + tig0023238:44061-44080 Msa1406670:intron 35.0%
CTAATGATGTAGGGAGTTAT+TGG - tig0023238:44200-44219 None:intergenic 35.0%
GTAGTCAAGCATTACTCATA+AGG - tig0023238:44293-44312 None:intergenic 35.0%
TGCTGGTCAAAATGCTATAT+AGG - tig0023238:44484-44503 None:intergenic 35.0%
! CTTTTACTTTCAGTTGGAGA+AGG + tig0023238:44576-44595 Msa1406670:intron 35.0%
!! GGATTGCTTGGTTTTCTTTT+GGG - tig0023238:44664-44683 None:intergenic 35.0%
!! AGGATTGCTTGGTTTTCTTT+TGG - tig0023238:44665-44684 None:intergenic 35.0%
TTGCTCCACTATGTAATGTT+GGG - tig0023238:44714-44733 None:intergenic 35.0%
TTTGCTCCACTATGTAATGT+TGG - tig0023238:44715-44734 None:intergenic 35.0%
! TTACATAGTGGAGCAAAGTA+TGG + tig0023238:44718-44737 Msa1406670:CDS 35.0%
GAAGATGCAATTGCAATAAG+TGG - tig0023238:44748-44767 None:intergenic 35.0%
ATTGCAATTGCATCTTCACA+CGG + tig0023238:44751-44770 Msa1406670:CDS 35.0%
TGAGAAAGAATCACTTCTAG+AGG + tig0023238:44792-44811 Msa1406670:CDS 35.0%
TGTAGAGTGACTTCATTGAA+AGG - tig0023238:44865-44884 None:intergenic 35.0%
GTTATTACCTCTTTCACTGA+AGG - tig0023238:45079-45098 None:intergenic 35.0%
! TGGTTTTCAATCTCAGTAGT+AGG - tig0023238:45127-45146 None:intergenic 35.0%
CATCATCTATCTTCAACATC+TGG - tig0023238:45147-45166 None:intergenic 35.0%
CAGATGTTGAAGATAGATGA+TGG + tig0023238:45145-45164 Msa1406670:CDS 35.0%
AAACACACACAAAAGAACGA+TGG + tig0023238:45169-45188 Msa1406670:CDS 35.0%
AGAACAATTCTCCAACTTAG+AGG - tig0023238:45206-45225 None:intergenic 35.0%
! AGTAAGACCATCTGTTTTCT+CGG - tig0023238:45245-45264 None:intergenic 35.0%
! AGGAAATGATTGATGACTAG+AGG - tig0023238:45494-45513 None:intergenic 35.0%
AAGACATGTTGAGAAAGGAT+TGG - tig0023238:45552-45571 None:intergenic 35.0%
TGTAGAAGACATGTTGAGAA+AGG - tig0023238:45557-45576 None:intergenic 35.0%
! CAAGTTTTGCTGCTACATTT+TGG + tig0023238:45632-45651 Msa1406670:CDS 35.0%
ATATCTCCTTGATCTGTCTT+AGG - tig0023238:45898-45917 None:intergenic 35.0%
TGTTTCTTCATCTGAATCAG+AGG + tig0023238:46011-46030 Msa1406670:CDS 35.0%
AGAGAAGGATGAGAAAGAAA+AGG + tig0023238:46203-46222 Msa1406670:CDS 35.0%
TTAGCAACCTTCTTGATTCT+TGG + tig0023238:46292-46311 Msa1406670:CDS 35.0%
CTGTAAAAAACGCTGACATA+AGG - tig0023238:46397-46416 None:intergenic 35.0%
!!! CTTATGTCAGCGTTTTTTAC+AGG + tig0023238:46395-46414 Msa1406670:intron 35.0%
AAATGCATTTCTTGCTCTCA+AGG - tig0023238:46527-46546 None:intergenic 35.0%
ATGCATTTGTAATTGTGACC+AGG + tig0023238:46539-46558 Msa1406670:CDS 35.0%
AAACAATACAGACACCAAGA+GGG - tig0023238:46843-46862 None:intergenic 35.0%
TAAACAATACAGACACCAAG+AGG - tig0023238:46844-46863 None:intergenic 35.0%
CCAAGAAAGTAAAAGAACGT+AGG - tig0023238:46929-46948 None:intergenic 35.0%
! CCTACGTTCTTTTACTTTCT+TGG + tig0023238:46926-46945 Msa1406670:three_prime_UTR 35.0%
CGAAGAAAGTGATAGAATGA+AGG - tig0023238:47050-47069 None:intergenic 35.0%
! AGTAAGTTGAGAAGGAAGGA+AGG - tig0023238:36833-36852 None:intergenic 40.0%
AGATACAGTTTGTAGCAGGA+AGG - tig0023238:36871-36890 None:intergenic 40.0%
TTGATCTCTATATGTTGCGG+TGG + tig0023238:37140-37159 Msa1406670:intron 40.0%
GAGGAAATAGTAAGAAGGAG+TGG - tig0023238:37340-37359 None:intergenic 40.0%
GAGCAGAGGAAATAGTAAGA+AGG - tig0023238:37345-37364 None:intergenic 40.0%
ATATGTTCTGCATGAGCAAG+GGG - tig0023238:37762-37781 None:intergenic 40.0%
CTATATGTTCTGCATGAGCA+AGG - tig0023238:37764-37783 None:intergenic 40.0%
CTTGCTCATGCAGAACATAT+AGG + tig0023238:37762-37781 Msa1406670:intron 40.0%
CATAAATTAGGAGGTGAGAG+AGG - tig0023238:37852-37871 None:intergenic 40.0%
! GACTCTTGATGAGAGTATAG+AGG + tig0023238:37930-37949 Msa1406670:intron 40.0%
! TCTTGATGAGAGTATAGAGG+AGG + tig0023238:37933-37952 Msa1406670:intron 40.0%
CGATATCTTGTAGTGTCTAG+TGG + tig0023238:38615-38634 Msa1406670:intron 40.0%
TTTGCCTAAAAGGCTCCTTT+AGG + tig0023238:38673-38692 Msa1406670:intron 40.0%
TTACTAGCAAGCTTCTTTCG+TGG + tig0023238:38765-38784 Msa1406670:intron 40.0%
GTGAAACTTCCATCAGATGA+TGG - tig0023238:38807-38826 None:intergenic 40.0%
! CTGTGGATAAAAATGGTGGA+TGG - tig0023238:38917-38936 None:intergenic 40.0%
TGGTCTGTGGATAAAAATGG+TGG - tig0023238:38921-38940 None:intergenic 40.0%
GCTTGGTCTGTGGATAAAAA+TGG - tig0023238:38924-38943 None:intergenic 40.0%
TCCGCATGTCTTAGAATTTG+TGG - tig0023238:39078-39097 None:intergenic 40.0%
TGACTGTGAAGAATAGAGGA+AGG - tig0023238:39300-39319 None:intergenic 40.0%
TTCCTCTATTCTTCACAGTC+AGG + tig0023238:39299-39318 Msa1406670:intron 40.0%
! TGGGGATATAATGGAGAGTT+GGG - tig0023238:39327-39346 None:intergenic 40.0%
! TTGGGGATATAATGGAGAGT+TGG - tig0023238:39328-39347 None:intergenic 40.0%
AACACGGCATAGATCTTGTT+GGG - tig0023238:39346-39365 None:intergenic 40.0%
TAACACGGCATAGATCTTGT+TGG - tig0023238:39347-39366 None:intergenic 40.0%
CAATGACACTGAGAGTAACA+CGG - tig0023238:39362-39381 None:intergenic 40.0%
TTTGTTCACGATTGCACTCT+AGG + tig0023238:39393-39412 Msa1406670:intron 40.0%
GGGTTACTCATACATCCAAA+AGG + tig0023238:39456-39475 Msa1406670:intron 40.0%
ACACCAAGAGAAGAACAGAA+GGG - tig0023238:39551-39570 None:intergenic 40.0%
TACACCAAGAGAAGAACAGA+AGG - tig0023238:39552-39571 None:intergenic 40.0%
CAGAAGGTCCACAATGAAAT+TGG - tig0023238:39582-39601 None:intergenic 40.0%
CAATTTCATTGTGGACCTTC+TGG + tig0023238:39580-39599 Msa1406670:intron 40.0%
AGAAGCAACTATACTGGAGT+CGG - tig0023238:39623-39642 None:intergenic 40.0%
GTACAAACATGGAGAGGATA+AGG - tig0023238:39768-39787 None:intergenic 40.0%
! TGAAAGGTACAAACATGGAG+AGG - tig0023238:39774-39793 None:intergenic 40.0%
AAAGTCTGAACCAGAGACAA+AGG - tig0023238:39824-39843 None:intergenic 40.0%
AACATCATCTAGCGTCACTT+AGG - tig0023238:39885-39904 None:intergenic 40.0%
CATTACACTCCAATGACACT+TGG + tig0023238:39919-39938 Msa1406670:intron 40.0%
AACAAGTTCCCAAGTGTCAT+TGG - tig0023238:39931-39950 None:intergenic 40.0%
ATTGCAGTCTTAGAAGGCAA+GGG - tig0023238:39954-39973 None:intergenic 40.0%
AATTGCAGTCTTAGAAGGCA+AGG - tig0023238:39955-39974 None:intergenic 40.0%
!! TTGCCTTCTAAGACTGCAAT+TGG + tig0023238:39954-39973 Msa1406670:intron 40.0%
!!! TGGTTTTATAGGGTGACAGT+TGG + tig0023238:39974-39993 Msa1406670:intron 40.0%
AGTGATTGTCAGATCTTGTG+GGG + tig0023238:40010-40029 Msa1406670:intron 40.0%
TCCCTCAAGAGATTTAACAC+TGG + tig0023238:40130-40149 Msa1406670:intron 40.0%
CACCAGTGTTAAATCTCTTG+AGG - tig0023238:40135-40154 None:intergenic 40.0%
ATTTAACACTGGTGCATTCC+TGG + tig0023238:40141-40160 Msa1406670:intron 40.0%
TTTAACACTGGTGCATTCCT+GGG + tig0023238:40142-40161 Msa1406670:intron 40.0%
TATACGACTTTCCCTTGTCA+TGG + tig0023238:40194-40213 Msa1406670:intron 40.0%
ATACATGGCATCCATGACAA+GGG - tig0023238:40208-40227 None:intergenic 40.0%
TATTAGAAAGGCCTTCTTGC+AGG + tig0023238:40252-40271 Msa1406670:intron 40.0%
TTTGTGCAATTCCTGCAAGA+AGG - tig0023238:40266-40285 None:intergenic 40.0%
CATTCTCCTTGTGCTTGATT+TGG + tig0023238:40383-40402 Msa1406670:intron 40.0%
AAACGTCCAAATCAAGCACA+AGG - tig0023238:40392-40411 None:intergenic 40.0%
AGATAAATCCACAAGCCGAA+AGG - tig0023238:40485-40504 None:intergenic 40.0%
GTGACAGCGTGAATAATATC+TGG + tig0023238:40537-40556 Msa1406670:intron 40.0%
GGTCCTCTCAAATACTTCTT+AGG + tig0023238:40597-40616 Msa1406670:intron 40.0%
! CATACTTTGTCGGTTACCAT+AGG - tig0023238:40643-40662 None:intergenic 40.0%
GACATTACGCTCCATACAAT+AGG - tig0023238:40719-40738 None:intergenic 40.0%
!!! TGTCAAACTTCTTTTGGGAC+AGG + tig0023238:40735-40754 Msa1406670:intron 40.0%
!!! GTCAAACTTCTTTTGGGACA+GGG + tig0023238:40736-40755 Msa1406670:intron 40.0%
!!! TCAAACTTCTTTTGGGACAG+GGG + tig0023238:40737-40756 Msa1406670:intron 40.0%
GGGAAGATATTTGCATCTTG+TGG + tig0023238:40778-40797 Msa1406670:intron 40.0%
TTGTCACTCTGTTAGTGACT+AGG + tig0023238:40915-40934 Msa1406670:intron 40.0%
TTGGAGGAAACCTGATTTCA+TGG + tig0023238:40986-41005 Msa1406670:intron 40.0%
CATAGTTGTCAGATCAAGTG+CGG + tig0023238:41026-41045 Msa1406670:intron 40.0%
GACATATATGTGTCAGCTTG+AGG + tig0023238:41234-41253 Msa1406670:intron 40.0%
!! ATTATAGCAAGAGTACCCTG+AGG - tig0023238:41339-41358 None:intergenic 40.0%
GTTCCTTAACAAGTGCCTTA+AGG + tig0023238:41464-41483 Msa1406670:intron 40.0%
!!! GATACCTCATGCCATTTTAG+AGG + tig0023238:41709-41728 Msa1406670:intron 40.0%
!! ATTCCCTCTAAAATGGCATG+AGG - tig0023238:41716-41735 None:intergenic 40.0%
GCATGACATAAAATGGCATG+AGG - tig0023238:41746-41765 None:intergenic 40.0%
!! GTTGGGTTGGATTGAGTAAT+GGG - tig0023238:41961-41980 None:intergenic 40.0%
!!! CACTAATTTTTGGGTTGGGT+TGG - tig0023238:41974-41993 None:intergenic 40.0%
CAACCCAACCCAAAAATTAG+TGG + tig0023238:41972-41991 Msa1406670:intron 40.0%
!!! GAACCCACTAATTTTTGGGT+TGG - tig0023238:41979-41998 None:intergenic 40.0%
! GTTATACTATTGGGTGGGTT+TGG - tig0023238:42004-42023 None:intergenic 40.0%
AACCCACCCAATAGTATAAC+GGG + tig0023238:42004-42023 Msa1406670:intron 40.0%
! TAAATAGGGTACTCCGGTTT+GGG - tig0023238:42046-42065 None:intergenic 40.0%
AATGTCTATGATGTGCGTAG+GGG - tig0023238:42117-42136 None:intergenic 40.0%
! GTCATGCTAATTGGTGTTCT+TGG - tig0023238:42402-42421 None:intergenic 40.0%
GAGTAGAATAAAGGGAGAAG+AGG - tig0023238:42590-42609 None:intergenic 40.0%
CCAGAAATAATCGTTAGTGG+GGG - tig0023238:42728-42747 None:intergenic 40.0%
GCCAGAAATAATCGTTAGTG+GGG - tig0023238:42729-42748 None:intergenic 40.0%
GAGCCAGAAATAATCGTTAG+TGG - tig0023238:42731-42750 None:intergenic 40.0%
GTTGATTACTGTCTCGTTAC+AGG - tig0023238:42797-42816 None:intergenic 40.0%
!! CACTGCTAAGGGTTTTGTAA+AGG - tig0023238:42865-42884 None:intergenic 40.0%
TGTATTCTCAGCACTGCTAA+GGG - tig0023238:42876-42895 None:intergenic 40.0%
ATGTATTCTCAGCACTGCTA+AGG - tig0023238:42877-42896 None:intergenic 40.0%
GTGCCTATATTGACAAGATG+AGG + tig0023238:43078-43097 Msa1406670:intron 40.0%
GAGGAGATGCAATGCTTTAT+TGG + tig0023238:43097-43116 Msa1406670:intron 40.0%
GCCTATCTTCATTCATTTGC+GGG - tig0023238:43125-43144 None:intergenic 40.0%
AAAAGTGATACAAGAGAGGG+GGG + tig0023238:43174-43193 Msa1406670:intron 40.0%
AAGCTGAAGCGATGACAATT+GGG + tig0023238:43304-43323 Msa1406670:intron 40.0%
TGGGTGAAGTACACTTGATT+AGG + tig0023238:43323-43342 Msa1406670:intron 40.0%
TTTCTGCTTGCAACCATGAT+TGG + tig0023238:43499-43518 Msa1406670:intron 40.0%
CACACATGACATCAAAGTTG+GGG - tig0023238:43698-43717 None:intergenic 40.0%
CACACACATGACATCAAAGT+TGG - tig0023238:43700-43719 None:intergenic 40.0%
CAACTTTGATGTCATGTGTG+TGG + tig0023238:43698-43717 Msa1406670:intron 40.0%
! TCTCGCTCTAATACCTTTTC+TGG + tig0023238:43819-43838 Msa1406670:intron 40.0%
GAACACAAAAGCAAGTTCTG+AGG - tig0023238:44044-44063 None:intergenic 40.0%
AACATGACCGGAACTTTGAT+AGG - tig0023238:44071-44090 None:intergenic 40.0%
GAGTTGTACACAAACATGAC+CGG - tig0023238:44083-44102 None:intergenic 40.0%
GTTTGTGTACAACTCAACGT+TGG + tig0023238:44088-44107 Msa1406670:intron 40.0%
!! GAGAAGGAAGCACTTGTAAA+AGG + tig0023238:44592-44611 Msa1406670:CDS 40.0%
!! CTTGTAAAAGGTGCTGCATT+AGG + tig0023238:44604-44623 Msa1406670:CDS 40.0%
! TAATGTTGGGGTACCAACAT+TGG - tig0023238:44701-44720 None:intergenic 40.0%
TGCTCCACTATGTAATGTTG+GGG - tig0023238:44713-44732 None:intergenic 40.0%
TTCACACGGTAAACAAGCAA+TGG + tig0023238:44765-44784 Msa1406670:CDS 40.0%
! AGGAGCATAAAGATGAGGAA+AGG + tig0023238:44900-44919 Msa1406670:intron 40.0%
AGTATTAACAGTCCTCAAGG+AGG + tig0023238:44964-44983 Msa1406670:CDS 40.0%
ACCCTGTTCATCTGTATCTT+CGG + tig0023238:44988-45007 Msa1406670:CDS 40.0%
AGACAAATTCCTGCACCATA+AGG + tig0023238:45044-45063 Msa1406670:CDS 40.0%
GACAAATTCCTGCACCATAA+GGG + tig0023238:45045-45064 Msa1406670:CDS 40.0%
ACAAATTCCTGCACCATAAG+GGG + tig0023238:45046-45065 Msa1406670:CDS 40.0%
GTTTACACCTTCAGTGAAAG+AGG + tig0023238:45069-45088 Msa1406670:CDS 40.0%
CATTTGTCGAACCTCTAAGT+TGG + tig0023238:45192-45211 Msa1406670:CDS 40.0%
GGAGAATTGTTCTCCGAAAT+CGG + tig0023238:45213-45232 Msa1406670:CDS 40.0%
! TTCTCGGATTGAACCGATTT+CGG - tig0023238:45229-45248 None:intergenic 40.0%
GTTCAATCCGAGAAAACAGA+TGG + tig0023238:45235-45254 Msa1406670:CDS 40.0%
GACTCTACATTTCAGCCAAT+AGG + tig0023238:45388-45407 Msa1406670:CDS 40.0%
TCTACATTTCAGCCAATAGG+AGG + tig0023238:45391-45410 Msa1406670:CDS 40.0%
CTACATTTCAGCCAATAGGA+GGG + tig0023238:45392-45411 Msa1406670:CDS 40.0%
TACATTTCAGCCAATAGGAG+GGG + tig0023238:45393-45412 Msa1406670:CDS 40.0%
TTATGTGCAAATGGAGGACA+AGG - tig0023238:45517-45536 None:intergenic 40.0%
TCAGCATGGTTATGTGCAAA+TGG - tig0023238:45526-45545 None:intergenic 40.0%
! GAAAGGATTGGTAATCAGCA+TGG - tig0023238:45540-45559 None:intergenic 40.0%
GGTTTCCCATCTAGACAAAT+TGG + tig0023238:45706-45725 Msa1406670:CDS 40.0%
GCGAACCAATTTGTCTAGAT+GGG - tig0023238:45714-45733 None:intergenic 40.0%
TCTAGTAACTGATCTTGCAG+AGG - tig0023238:45937-45956 None:intergenic 40.0%
! TGCAAAGCTTCTGAGTTTTC+TGG - tig0023238:45961-45980 None:intergenic 40.0%
GATTCAGATGAAGAAACAGC+TGG - tig0023238:46009-46028 None:intergenic 40.0%
GAACCCTGATTCCAACAAAA+TGG + tig0023238:46107-46126 Msa1406670:CDS 40.0%
! CCTCCATTTTGTTGGAATCA+GGG - tig0023238:46113-46132 None:intergenic 40.0%
CCTGATTCCAACAAAATGGA+GGG + tig0023238:46111-46130 Msa1406670:CDS 40.0%
! TTTTCTGCCCTCCATTTTGT+TGG - tig0023238:46121-46140 None:intergenic 40.0%
CTTCTATATCGACGACTACT+AGG - tig0023238:46270-46289 None:intergenic 40.0%
CAACCTTCTTGATTCTTGGA+AGG + tig0023238:46296-46315 Msa1406670:CDS 40.0%
ATGAGGAGGTGAAAAGCTTT+GGG - tig0023238:46463-46482 None:intergenic 40.0%
AAACTTAAGACTCGTCGAAC+AGG + tig0023238:46633-46652 Msa1406670:CDS 40.0%
AACTTAAGACTCGTCGAACA+GGG + tig0023238:46634-46653 Msa1406670:CDS 40.0%
AAGATGTTTAGTAGAGGCCA+AGG + tig0023238:46671-46690 Msa1406670:CDS 40.0%
! TTGCAACCAAGTTGAAGAGA+CGG + tig0023238:46713-46732 Msa1406670:CDS 40.0%
CATCATTTCTAACTCCCTCT+TGG + tig0023238:46826-46845 Msa1406670:three_prime_UTR 40.0%
!!! ACATGTCGGTATTTTGGTTG+AGG + tig0023238:47149-47168 Msa1406670:three_prime_UTR 40.0%
TTGTATTGGGCTGATGATAC+AGG + tig0023238:47193-47212 Msa1406670:three_prime_UTR 40.0%
TGTATTGGGCTGATGATACA+GGG + tig0023238:47194-47213 Msa1406670:three_prime_UTR 40.0%
! AGATTGGTTGTGGATGCTTC+TGG + tig0023238:36772-36791 Msa1406670:five_prime_UTR 45.0%
GTTGAGAAGGAAGGAAGGAA+GGG - tig0023238:36828-36847 None:intergenic 45.0%
AGTTGAGAAGGAAGGAAGGA+AGG - tig0023238:36829-36848 None:intergenic 45.0%
!!! TCATTCAGGTTTTGGTGCTG+TGG + tig0023238:37089-37108 Msa1406670:intron 45.0%
CTCTATATGTTGCGGTGGAT+TGG + tig0023238:37145-37164 Msa1406670:intron 45.0%
ACAAGATCTTCTGAGCCTCA+TGG + tig0023238:37429-37448 Msa1406670:exon 45.0%
CTAGAAGCCCTCAAGCTATA+TGG + tig0023238:37653-37672 Msa1406670:CDS 45.0%
TATGTTCTGCATGAGCAAGG+GGG - tig0023238:37761-37780 None:intergenic 45.0%
CAAAGACTGCTGTGCAAATC+AGG + tig0023238:37787-37806 Msa1406670:CDS 45.0%
AACCAACAATACTGCTCTGC+TGG - tig0023238:37977-37996 None:intergenic 45.0%
ATGGTCAGTAGTTGCTACGT+TGG + tig0023238:38198-38217 Msa1406670:intron 45.0%
TGGTCAGTAGTTGCTACGTT+GGG + tig0023238:38199-38218 Msa1406670:intron 45.0%
AGTAGTGATGCAACTTGGGT+GGG - tig0023238:38645-38664 None:intergenic 45.0%
AAGTAGTGATGCAACTTGGG+TGG - tig0023238:38646-38665 None:intergenic 45.0%
! GATGCCTAAAGGAGCCTTTT+AGG - tig0023238:38680-38699 None:intergenic 45.0%
ACACTCATTGGGATGCCTAA+AGG - tig0023238:38691-38710 None:intergenic 45.0%
GCATCCCAATGAGTGTCTTT+CGG + tig0023238:38695-38714 Msa1406670:intron 45.0%
CATCCCAATGAGTGTCTTTC+GGG + tig0023238:38696-38715 Msa1406670:intron 45.0%
ATCCCAATGAGTGTCTTTCG+GGG + tig0023238:38697-38716 Msa1406670:intron 45.0%
AGGACTTCACCATCATCTGA+TGG + tig0023238:38795-38814 Msa1406670:intron 45.0%
AGAGCCTATCAAAGATCCGT+TGG + tig0023238:38875-38894 Msa1406670:intron 45.0%
GAGCCTATCAAAGATCCGTT+GGG + tig0023238:38876-38895 Msa1406670:intron 45.0%
TGTCCCAACGGATCTTTGAT+AGG - tig0023238:38882-38901 None:intergenic 45.0%
AGACCAAGCCCAATAGTGAT+GGG + tig0023238:38935-38954 Msa1406670:intron 45.0%
GTCCCACATTGGATAAGTGA+TGG + tig0023238:38979-38998 Msa1406670:intron 45.0%
GGCCATCACTTATCCAATGT+GGG - tig0023238:38984-39003 None:intergenic 45.0%
AGGCCATCACTTATCCAATG+TGG - tig0023238:38985-39004 None:intergenic 45.0%
ACATTGGATAAGTGATGGCC+TGG + tig0023238:38984-39003 Msa1406670:intron 45.0%
! CGAGAGCACAAGTTGTTAGA+TGG - tig0023238:39148-39167 None:intergenic 45.0%
GCTCTCGCACCATAAAAGAA+TGG + tig0023238:39161-39180 Msa1406670:intron 45.0%
GATTTGCAGTCCTCCTCAAT+AGG + tig0023238:39255-39274 Msa1406670:intron 45.0%
AGCCTGACTGTGAAGAATAG+AGG - tig0023238:39304-39323 None:intergenic 45.0%
ACACGGCATAGATCTTGTTG+GGG - tig0023238:39345-39364 None:intergenic 45.0%
ACCAAGAGAAGAACAGAAGG+GGG - tig0023238:39549-39568 None:intergenic 45.0%
CACCAAGAGAAGAACAGAAG+GGG - tig0023238:39550-39569 None:intergenic 45.0%
CAACACGTGGAATATCCAGA+AGG - tig0023238:39598-39617 None:intergenic 45.0%
GAAGCAACTATACTGGAGTC+GGG - tig0023238:39622-39641 None:intergenic 45.0%
TGGAGCAGAAGCAACTATAC+TGG - tig0023238:39629-39648 None:intergenic 45.0%
TGGTAGGTTAGCAAAGAAGG+TGG - tig0023238:39649-39668 None:intergenic 45.0%
TGCTGGTAGGTTAGCAAAGA+AGG - tig0023238:39652-39671 None:intergenic 45.0%
CTTTGCTAACCTACCAGCAA+TGG + tig0023238:39653-39672 Msa1406670:intron 45.0%
TTCCTAGTCTCCTTTGTCTC+TGG + tig0023238:39811-39830 Msa1406670:intron 45.0%
AACCAGAGACAAAGGAGACT+AGG - tig0023238:39816-39835 None:intergenic 45.0%
ATGGCTTCGCTTATAGGCTT+AGG - tig0023238:39854-39873 None:intergenic 45.0%
TCAGGTATGGCTTCGCTTAT+AGG - tig0023238:39860-39879 None:intergenic 45.0%
CGTCACTTAGGTATCAGGTA+TGG - tig0023238:39873-39892 None:intergenic 45.0%
TCTAGCGTCACTTAGGTATC+AGG - tig0023238:39878-39897 None:intergenic 45.0%
AAATCTCTTGAGGGAGAGCT+TGG - tig0023238:40125-40144 None:intergenic 45.0%
TTAACACTGGTGCATTCCTG+GGG + tig0023238:40143-40162 Msa1406670:intron 45.0%
GATACATGGCATCCATGACA+AGG - tig0023238:40209-40228 None:intergenic 45.0%
CATGGATGCCATGTATCAAC+TGG + tig0023238:40212-40231 Msa1406670:intron 45.0%
! CAACTGGTCTATTCACTAGC+TGG + tig0023238:40228-40247 Msa1406670:intron 45.0%
CAAGCCGAAAGGAGAATGAA+TGG - tig0023238:40474-40493 None:intergenic 45.0%
! TTCATTCTCCTTTCGGCTTG+TGG + tig0023238:40474-40493 Msa1406670:intron 45.0%
GTCGGTTACCATAGGAGAAT+TGG - tig0023238:40635-40654 None:intergenic 45.0%
!!! CAAACTTCTTTTGGGACAGG+GGG + tig0023238:40738-40757 Msa1406670:intron 45.0%
CACTCTGTTAGTGACTAGGT+AGG + tig0023238:40919-40938 Msa1406670:intron 45.0%
GAGAGAGTTAGGTAGCATCT+TGG + tig0023238:41256-41275 Msa1406670:intron 45.0%
! TGCCCTTAAGGCACTTGTTA+AGG - tig0023238:41470-41489 None:intergenic 45.0%
AACAAGTGCAAGTGCCCTTA+AGG - tig0023238:41482-41501 None:intergenic 45.0%
TCCCTTAGAATATACAGGGG+CGG + tig0023238:41508-41527 Msa1406670:intron 45.0%
TCCGCCCCTGTATATTCTAA+GGG - tig0023238:41512-41531 None:intergenic 45.0%
ATCCGCCCCTGTATATTCTA+AGG - tig0023238:41513-41532 None:intergenic 45.0%
GTACAAAAGTTTGTGGAGGC+AGG - tig0023238:41559-41578 None:intergenic 45.0%
! TTCACCGTCAACGTTGATTG+AGG - tig0023238:41666-41685 None:intergenic 45.0%
!! GGTTGGGTTGGATTGAGTAA+TGG - tig0023238:41962-41981 None:intergenic 45.0%
! GGGCGAACCCACTAATTTTT+GGG - tig0023238:41983-42002 None:intergenic 45.0%
! TGGGCGAACCCACTAATTTT+TGG - tig0023238:41984-42003 None:intergenic 45.0%
CACCCGTTATACTATTGGGT+GGG - tig0023238:42009-42028 None:intergenic 45.0%
! CTAAATAGGGTACTCCGGTT+TGG - tig0023238:42047-42066 None:intergenic 45.0%
AGGAGAAGAACGATGAGACT+AGG - tig0023238:42531-42550 None:intergenic 45.0%
CCCCCACTAACGATTATTTC+TGG + tig0023238:42725-42744 Msa1406670:intron 45.0%
GCCCGCAAATGAATGAAGAT+AGG + tig0023238:43121-43140 Msa1406670:intron 45.0%
TTGAACAAAAAAAGGGGGGC+AGG - tig0023238:43239-43258 None:intergenic 45.0%
TTTGTGCCATCTGTCAGATG+TGG + tig0023238:43270-43289 Msa1406670:intron 45.0%
TTGTGCCATCTGTCAGATGT+GGG + tig0023238:43271-43290 Msa1406670:intron 45.0%
ATTGTCATCGCTTCAGCTTG+TGG - tig0023238:43303-43322 None:intergenic 45.0%
CAAGCTGAAGCGATGACAAT+TGG + tig0023238:43303-43322 Msa1406670:intron 45.0%
CATGACATCAAAGTTGGGGA+GGG - tig0023238:43694-43713 None:intergenic 45.0%
ACATGACATCAAAGTTGGGG+AGG - tig0023238:43695-43714 None:intergenic 45.0%
!! TGTAGGGAGTTATTGGCTTC+AGG - tig0023238:44193-44212 None:intergenic 45.0%
! AAGAGTATACTCAGTGGGTG+AGG - tig0023238:44552-44571 None:intergenic 45.0%
TTGCGAGGATAAGGATTGCT+TGG - tig0023238:44676-44695 None:intergenic 45.0%
!! ACATTGGTCTTGCGAGGATA+AGG - tig0023238:44685-44704 None:intergenic 45.0%
TATCCTCGCAAGACCAATGT+TGG + tig0023238:44685-44704 Msa1406670:CDS 45.0%
GGTACCCCAACATTACATAG+TGG + tig0023238:44706-44725 Msa1406670:CDS 45.0%
GCCGAAGATACAGATGAACA+GGG - tig0023238:44992-45011 None:intergenic 45.0%
TGCCGAAGATACAGATGAAC+AGG - tig0023238:44993-45012 None:intergenic 45.0%
ATGGTGCAGGAATTTGTCTG+TGG - tig0023238:45043-45062 None:intergenic 45.0%
CAAATTCCTGCACCATAAGG+GGG + tig0023238:45047-45066 Msa1406670:CDS 45.0%
! TGAAGGTGTAAACCCCCTTA+TGG - tig0023238:45062-45081 None:intergenic 45.0%
CGTGCACAGTGATATGTCTT+GGG - tig0023238:45309-45328 None:intergenic 45.0%
ACGTGCACAGTGATATGTCT+TGG - tig0023238:45310-45329 None:intergenic 45.0%
ATCACTGTGCACGTTGTTGA+TGG + tig0023238:45316-45335 Msa1406670:CDS 45.0%
TCACTGTGCACGTTGTTGAT+GGG + tig0023238:45317-45336 Msa1406670:CDS 45.0%
! CACGTTGTTGATGGGAACTT+TGG + tig0023238:45325-45344 Msa1406670:CDS 45.0%
ACATTTCAGCCAATAGGAGG+GGG + tig0023238:45394-45413 Msa1406670:CDS 45.0%
GCTGGATTTGCGAAGAGATT+AGG - tig0023238:45430-45449 None:intergenic 45.0%
TCACTTGTGTTTGATGCAGC+TGG - tig0023238:45448-45467 None:intergenic 45.0%
GCATGGTTATGTGCAAATGG+AGG - tig0023238:45523-45542 None:intergenic 45.0%
!! AGCAAAACTTGCTGCAGCAT+GGG - tig0023238:45623-45642 None:intergenic 45.0%
GGCGAACCAATTTGTCTAGA+TGG - tig0023238:45715-45734 None:intergenic 45.0%
GCAATAGCTGTTACACTAGG+AGG - tig0023238:45736-45755 None:intergenic 45.0%
GCTGCAATAGCTGTTACACT+AGG - tig0023238:45739-45758 None:intergenic 45.0%
CAACCACCTAAGACAGATCA+AGG + tig0023238:45889-45908 Msa1406670:CDS 45.0%
TCTCCTTGATCTGTCTTAGG+TGG - tig0023238:45895-45914 None:intergenic 45.0%
AGTAACTGATCTTGCAGAGG+AGG - tig0023238:45934-45953 None:intergenic 45.0%
GCTTTGCAAGCTCAACATTC+AGG + tig0023238:45973-45992 Msa1406670:CDS 45.0%
TCATCTGAATCAGAGGAGAG+TGG + tig0023238:46018-46037 Msa1406670:CDS 45.0%
GAATCAGGGTTCTCAGAAAC+TGG - tig0023238:46099-46118 None:intergenic 45.0%
CCCTGATTCCAACAAAATGG+AGG + tig0023238:46110-46129 Msa1406670:CDS 45.0%
! CCCTCCATTTTGTTGGAATC+AGG - tig0023238:46114-46133 None:intergenic 45.0%
AGGGCAGAAAACTGATAGAC+CGG + tig0023238:46130-46149 Msa1406670:CDS 45.0%
TGTTGGAACCACAAGAAGAC+CGG - tig0023238:46152-46171 None:intergenic 45.0%
TTCACAGCTAGAGGTTGTGT+TGG - tig0023238:46169-46188 None:intergenic 45.0%
ATCAGTCTCTTCACAGCTAG+AGG - tig0023238:46178-46197 None:intergenic 45.0%
GTAGCTAAATGATCCGCATC+AGG - tig0023238:46243-46262 None:intergenic 45.0%
CCTCCTTCCAAGAATCAAGA+AGG - tig0023238:46302-46321 None:intergenic 45.0%
CCTTCTTGATTCTTGGAAGG+AGG + tig0023238:46299-46318 Msa1406670:CDS 45.0%
TGAGGAGGTGAAAAGCTTTG+GGG - tig0023238:46462-46481 None:intergenic 45.0%
CATGAGGAGGTGAAAAGCTT+TGG - tig0023238:46464-46483 None:intergenic 45.0%
TTTACCTTGTCCAAGACCCA+TGG - tig0023238:46616-46635 None:intergenic 45.0%
! TGCAACCAAGTTGAAGAGAC+GGG + tig0023238:46714-46733 Msa1406670:CDS 45.0%
!! TAAATAATAATAATAAAGAT+TGG - tig0023238:37226-37245 None:intergenic 5.0%
!!! ATATTTTTATTTTCATTTAA+AGG - tig0023238:38373-38392 None:intergenic 5.0%
!!! AAATATAAATTTAAAACAAT+GGG - tig0023238:42656-42675 None:intergenic 5.0%
!!! AAAATATAAATTTAAAACAA+TGG - tig0023238:42657-42676 None:intergenic 5.0%
!!! TGGTGCTGTGGACTTCGTTT+TGG + tig0023238:37101-37120 Msa1406670:five_prime_UTR 50.0%
TGTGACATGAAGCAGAGCAG+AGG - tig0023238:37359-37378 None:intergenic 50.0%
GATCTTGTTCCCTGAGCCTA+AGG - tig0023238:37417-37436 None:intergenic 50.0%
! TCTTCTCCAGAGGAGTATGC+TGG - tig0023238:37463-37482 None:intergenic 50.0%
TGGAGAAGACGTCGTTCTCA+AGG + tig0023238:37474-37493 Msa1406670:CDS 50.0%
TGCTCGGCCATATAGCTTGA+GGG - tig0023238:37663-37682 None:intergenic 50.0%
ATGCTCGGCCATATAGCTTG+AGG - tig0023238:37664-37683 None:intergenic 50.0%
TCAAGCTATATGGCCGAGCA+TGG + tig0023238:37663-37682 Msa1406670:CDS 50.0%
CTTCTATACGCTGCCATGCT+CGG - tig0023238:37679-37698 None:intergenic 50.0%
ATGTTCTGCATGAGCAAGGG+GGG - tig0023238:37760-37779 None:intergenic 50.0%
!! TACTGCTCTGCTGGCTTGTA+AGG - tig0023238:37968-37987 None:intergenic 50.0%
AGCCAGCAGAGCAGTATTGT+TGG + tig0023238:37972-37991 Msa1406670:intron 50.0%
TCCCAATGAGTGTCTTTCGG+GGG + tig0023238:38698-38717 Msa1406670:intron 50.0%
TCCCCCGAAAGACACTCATT+GGG - tig0023238:38702-38721 None:intergenic 50.0%
GCTTCTTTCGTGGCTCTCAA+AGG + tig0023238:38775-38794 Msa1406670:intron 50.0%
TCCGTTGGGACATCTGCTAT+CGG + tig0023238:38890-38909 Msa1406670:intron 50.0%
! TCACTATTGGGCTTGGTCTG+TGG - tig0023238:38934-38953 None:intergenic 50.0%
CAGACCAAGCCCAATAGTGA+TGG + tig0023238:38934-38953 Msa1406670:intron 50.0%
AAGCCCATCACTATTGGGCT+TGG - tig0023238:38941-38960 None:intergenic 50.0%
CGCTCAAGCCCATCACTATT+GGG - tig0023238:38946-38965 None:intergenic 50.0%
!! CCAATAGTGATGGGCTTGAG+CGG + tig0023238:38944-38963 Msa1406670:intron 50.0%
!! CAATAGTGATGGGCTTGAGC+GGG + tig0023238:38945-38964 Msa1406670:intron 50.0%
TGTGGTGAAGAGTCCCACAT+TGG + tig0023238:38968-38987 Msa1406670:intron 50.0%
!!! ACCTCACAAGCCGCTTTTCT+GGG + tig0023238:39036-39055 Msa1406670:intron 50.0%
CTAACACAGCCCCAGAAAAG+CGG - tig0023238:39049-39068 None:intergenic 50.0%
!!! GCGTGCAAGCTTTTTCAACC+AGG - tig0023238:39215-39234 None:intergenic 50.0%
! GAAGAATAGAGGAAGGCACG+CGG - tig0023238:39293-39312 None:intergenic 50.0%
TCCCCCTTCTGTTCTTCTCT+TGG + tig0023238:39545-39564 Msa1406670:intron 50.0%
! AGTTTTGCGCAGTGGTTACC+CGG - tig0023238:40060-40079 None:intergenic 50.0%
TTGTAAAATCGGGACTCGGG+AGG - tig0023238:40307-40326 None:intergenic 50.0%
GTGATTCTCGCCTTGCTTGT+CGG + tig0023238:40333-40352 Msa1406670:intron 50.0%
AGAGACTAAGCCGACAAGCA+AGG - tig0023238:40346-40365 None:intergenic 50.0%
GGGGCAAAAACTGAGCACAT+TGG - tig0023238:40687-40706 None:intergenic 50.0%
GGGGGAGTTGTTGAAATGCT+CGG + tig0023238:40756-40775 Msa1406670:intron 50.0%
GGGGAGTTGTTGAAATGCTC+GGG + tig0023238:40757-40776 Msa1406670:intron 50.0%
GGGAGTTGTTGAAATGCTCG+GGG + tig0023238:40758-40777 Msa1406670:intron 50.0%
TCTCGCTGCTCCATGAAATC+AGG - tig0023238:40999-41018 None:intergenic 50.0%
GTCAGCTTGAGGAGAGAGTT+AGG + tig0023238:41245-41264 Msa1406670:intron 50.0%
! ATGCAGGTAGAGCCTTGTGT+GGG + tig0023238:41531-41550 Msa1406670:intron 50.0%
CCACCCGTTATACTATTGGG+TGG - tig0023238:42010-42029 None:intergenic 50.0%
! CCACCCAATAGTATAACGGG+TGG + tig0023238:42007-42026 Msa1406670:intron 50.0%
AGTATCGTTTCCTTGGCCGT+GGG - tig0023238:42499-42518 None:intergenic 50.0%
TAGTATCGTTTCCTTGGCCG+TGG - tig0023238:42500-42519 None:intergenic 50.0%
TGTGCCATCTGTCAGATGTG+GGG + tig0023238:43272-43291 Msa1406670:intron 50.0%
CAAAGTTGGGGAGGGTGAAT+TGG - tig0023238:43686-43705 None:intergenic 50.0%
! TTGGGGCAGTTAAGCATTGC+TGG - tig0023238:44501-44520 None:intergenic 50.0%
ACATAGACATTCCCCCTCCA+CGG + tig0023238:44638-44657 Msa1406670:CDS 50.0%
! TTTTCTTTTGGGCCGTGGAG+GGG - tig0023238:44653-44672 None:intergenic 50.0%
! GTTTTCTTTTGGGCCGTGGA+GGG - tig0023238:44654-44673 None:intergenic 50.0%
!! CTTGGTTTTCTTTTGGGCCG+TGG - tig0023238:44658-44677 None:intergenic 50.0%
!! GTACCAACATTGGTCTTGCG+AGG - tig0023238:44691-44710 None:intergenic 50.0%
AGATGAGGAAAGGCCAACGA+CGG + tig0023238:44910-44929 Msa1406670:CDS 50.0%
TGTAAACCCCCTTATGGTGC+AGG - tig0023238:45056-45075 None:intergenic 50.0%
TGCACATTACCCCCTCCTAT+TGG - tig0023238:45406-45425 None:intergenic 50.0%
TGTGCAAATGGAGGACAAGG+AGG - tig0023238:45514-45533 None:intergenic 50.0%
!! CAGCAAAACTTGCTGCAGCA+TGG - tig0023238:45624-45643 None:intergenic 50.0%
GATTCTCCTGCTTGCTCTCA+AGG + tig0023238:45682-45701 Msa1406670:CDS 50.0%
AAACCTCCTTGAGAGCAAGC+AGG - tig0023238:45691-45710 None:intergenic 50.0%
AGTTGTTGATGCAGGAGGAC+AGG - tig0023238:45842-45861 None:intergenic 50.0%
GCTACAGTTGTTGATGCAGG+AGG - tig0023238:45847-45866 None:intergenic 50.0%
GGAGCTACAGTTGTTGATGC+AGG - tig0023238:45850-45869 None:intergenic 50.0%
CAGGGTTCTCAGAAACTGGT+TGG - tig0023238:46095-46114 None:intergenic 50.0%
CTGATAGACCGGTCTTCTTG+TGG + tig0023238:46141-46160 Msa1406670:CDS 50.0%
AGAGACTGATGCGCTAGAGA+AGG + tig0023238:46188-46207 Msa1406670:CDS 50.0%
!! TTGGAAGGAGGTGTCTGAAG+AGG + tig0023238:46311-46330 Msa1406670:CDS 50.0%
TACAGGGACGACTTGCCTTT+CGG + tig0023238:46412-46431 Msa1406670:intron 50.0%
TCTGGAGAATAGAGCCCGAA+AGG - tig0023238:46430-46449 None:intergenic 50.0%
TGAGGAGGGATTTCTGACCA+TGG + tig0023238:46596-46615 Msa1406670:CDS 50.0%
GAGGAGGGATTTCTGACCAT+GGG + tig0023238:46597-46616 Msa1406670:CDS 50.0%
GGATTTCTGACCATGGGTCT+TGG + tig0023238:46603-46622 Msa1406670:CDS 50.0%
TAGTAGAGGCCAAGGAAAGC+AGG + tig0023238:46679-46698 Msa1406670:CDS 50.0%
AGTAGAGGCCAAGGAAAGCA+GGG + tig0023238:46680-46699 Msa1406670:CDS 50.0%
AAATAGAAGTCCCCCCTTCC+AGG - tig0023238:46755-46774 None:intergenic 50.0%
CGGCAGCTCATGAAACTTGT+CGG + tig0023238:46874-46893 Msa1406670:three_prime_UTR 50.0%
GGCAGCTCATGAAACTTGTC+GGG + tig0023238:46875-46894 Msa1406670:three_prime_UTR 50.0%
GCTCATGAAACTTGTCGGGT+AGG + tig0023238:46879-46898 Msa1406670:three_prime_UTR 50.0%
TGAGCCTAAGGAGGAGGAGA+GGG - tig0023238:37405-37424 None:intergenic 55.0%
TCTCCTCCTCCTTAGGCTCA+GGG + tig0023238:37405-37424 Msa1406670:five_prime_UTR 55.0%
CTTGTTCCCTGAGCCTAAGG+AGG - tig0023238:37414-37433 None:intergenic 55.0%
!! ATGCTGGTGCTGCATCCATG+AGG - tig0023238:37447-37466 None:intergenic 55.0%
GAGAACGACGTCTTCTCCAG+AGG - tig0023238:37473-37492 None:intergenic 55.0%
CGAGCATGGCAGCGTATAGA+AGG + tig0023238:37677-37696 Msa1406670:CDS 55.0%
!! CTCTGCTGGCTTGTAAGGTG+AGG - tig0023238:37963-37982 None:intergenic 55.0%
CTCCCCCGAAAGACACTCAT+TGG - tig0023238:38703-38722 None:intergenic 55.0%
CCCGATAGCAGATGTCCCAA+CGG - tig0023238:38894-38913 None:intergenic 55.0%
CCGTTGGGACATCTGCTATC+GGG + tig0023238:38891-38910 Msa1406670:intron 55.0%
CCGCTCAAGCCCATCACTAT+TGG - tig0023238:38947-38966 None:intergenic 55.0%
GAAAAGCGGCTTGTGAGGTG+AGG - tig0023238:39035-39054 None:intergenic 55.0%
!!! CACCTCACAAGCCGCTTTTC+TGG + tig0023238:39035-39054 Msa1406670:intron 55.0%
!!! CCTCACAAGCCGCTTTTCTG+GGG + tig0023238:39037-39056 Msa1406670:intron 55.0%
!!! CGCTTTTCTGGGGCTGTGTT+AGG + tig0023238:39047-39066 Msa1406670:intron 55.0%
AGGGTGACAGTTGGACTGCA+TGG + tig0023238:39983-40002 Msa1406670:intron 55.0%
! GTCTCTGCAGTTTTGCGCAG+TGG - tig0023238:40068-40087 None:intergenic 55.0%
CAGAGACTAATCCCTCGAGC+CGG + tig0023238:40081-40100 Msa1406670:intron 55.0%
AGAGACTAATCCCTCGAGCC+GGG + tig0023238:40082-40101 Msa1406670:intron 55.0%
!! CATATGGGAAAAGGTGCCCC+AGG - tig0023238:40162-40181 None:intergenic 55.0%
!! CTGGGGCACCTTTTCCCATA+TGG + tig0023238:40160-40179 Msa1406670:intron 55.0%
GAATATACAGGGGCGGATGC+AGG + tig0023238:41515-41534 Msa1406670:intron 55.0%
! GATGCAGGTAGAGCCTTGTG+TGG + tig0023238:41530-41549 Msa1406670:intron 55.0%
! TTCGTGGGTGGGTTTGGGTT+GGG - tig0023238:42092-42111 None:intergenic 55.0%
!! ATGTGCGTAGGGGTGTTCGT+GGG - tig0023238:42107-42126 None:intergenic 55.0%
TCCACCCCACATCTGACAGA+TGG - tig0023238:43279-43298 None:intergenic 55.0%
! TTTCTTTTGGGCCGTGGAGG+GGG - tig0023238:44652-44671 None:intergenic 55.0%
! GGTTTTCTTTTGGGCCGTGG+AGG - tig0023238:44655-44674 None:intergenic 55.0%
! ATGAACAGGGTGCCTCCTTG+AGG - tig0023238:44979-44998 None:intergenic 55.0%
TCTCCTGCTTGCTCTCAAGG+AGG + tig0023238:45685-45704 Msa1406670:CDS 55.0%
CAGTAGCTGCTGCAACTGCA+TGG + tig0023238:45764-45783 Msa1406670:CDS 55.0%
TAGCTGCTGCAACTGCATGG+TGG + tig0023238:45767-45786 Msa1406670:CDS 55.0%
AGCTGCTGCAACTGCATGGT+GGG + tig0023238:45768-45787 Msa1406670:CDS 55.0%
CAGGCAAAAGCTGTCTGGAG+TGG - tig0023238:45823-45842 None:intergenic 55.0%
GAGGACAGGCAAAAGCTGTC+TGG - tig0023238:45828-45847 None:intergenic 55.0%
ACAGGGACGACTTGCCTTTC+GGG + tig0023238:46413-46432 Msa1406670:intron 55.0%
TCGGGCTCTATTCTCCAGAG+AGG + tig0023238:46431-46450 Msa1406670:CDS 55.0%
!! ACGGTAGGTTTTGCTGTGCC+TGG - tig0023238:46560-46579 None:intergenic 55.0%
CTGACCATGGGTCTTGGACA+AGG + tig0023238:46609-46628 Msa1406670:CDS 55.0%
GTAGAGGCCAAGGAAAGCAG+GGG + tig0023238:46681-46700 Msa1406670:CDS 55.0%
TGGGACCCGTCTCTTCAACT+TGG - tig0023238:46722-46741 None:intergenic 55.0%
TTGAAGAGACGGGTCCCAAG+AGG + tig0023238:46724-46743 Msa1406670:CDS 55.0%
CCTTCCAGGCGTATCCTCTT+GGG - tig0023238:46741-46760 None:intergenic 55.0%
CCAAGAGGATACGCCTGGAA+GGG + tig0023238:46739-46758 Msa1406670:CDS 55.0%
CAAGAGGATACGCCTGGAAG+GGG + tig0023238:46740-46759 Msa1406670:CDS 55.0%
AAGAGGATACGCCTGGAAGG+GGG + tig0023238:46741-46760 Msa1406670:CDS 55.0%
GAGGGAGGAGTGAGGTGGTT+TGG - tig0023238:37387-37406 None:intergenic 60.0%
TCCTCCCTCTCCTCCTCCTT+AGG + tig0023238:37398-37417 Msa1406670:five_prime_UTR 60.0%
CTGAGCCTAAGGAGGAGGAG+AGG - tig0023238:37406-37425 None:intergenic 60.0%
CTCTCCTCCTCCTTAGGCTC+AGG + tig0023238:37404-37423 Msa1406670:five_prime_UTR 60.0%
GTTCCCTGAGCCTAAGGAGG+AGG - tig0023238:37411-37430 None:intergenic 60.0%
GCAGCACCAGCATACTCCTC+TGG + tig0023238:37454-37473 Msa1406670:CDS 60.0%
GGGGGGTGGGATGGAATTAG+TGG - tig0023238:37743-37762 None:intergenic 60.0%
TCTGCATGAGCAAGGGGGGT+GGG - tig0023238:37756-37775 None:intergenic 60.0%
TTCTGCATGAGCAAGGGGGG+TGG - tig0023238:37757-37776 None:intergenic 60.0%
! GCTACGTTGGGTTGTCAGCC+TGG + tig0023238:38211-38230 Msa1406670:intron 60.0%
TGGCGGCGTATCACGTGTAC+AGG - tig0023238:38542-38561 None:intergenic 60.0%
CCCCAGAAAAGCGGCTTGTG+AGG - tig0023238:39040-39059 None:intergenic 60.0%
ACTGGAGTCGGGACAACACG+TGG - tig0023238:39611-39630 None:intergenic 60.0%
ACTAATCCCTCGAGCCGGGT+AGG + tig0023238:40086-40105 Msa1406670:intron 60.0%
AAAATCGGGACTCGGGAGGC+TGG - tig0023238:40303-40322 None:intergenic 60.0%
!! AGGGTACTCCGGTTTGGGTG+AGG - tig0023238:42041-42060 None:intergenic 60.0%
!! GGGTGGGTTTGGGTTGGGTT+TGG - tig0023238:42087-42106 None:intergenic 60.0%
! GTTCGTGGGTGGGTTTGGGT+TGG - tig0023238:42093-42112 None:intergenic 60.0%
! GGGTGTTCGTGGGTGGGTTT+GGG - tig0023238:42097-42116 None:intergenic 60.0%
!! GATGTGCGTAGGGGTGTTCG+TGG - tig0023238:42108-42127 None:intergenic 60.0%
AACTCACCGTCCCACTCCCA+CGG + tig0023238:42480-42499 Msa1406670:intron 60.0%
GTTTCCTTGGCCGTGGGAGT+GGG - tig0023238:42493-42512 None:intergenic 60.0%
GTGATACAAGAGAGGGGGGC+TGG + tig0023238:43178-43197 Msa1406670:intron 60.0%
!! ACAAGAGAGGGGGGCTGGTT+TGG + tig0023238:43183-43202 Msa1406670:intron 60.0%
GCCATCTGTCAGATGTGGGG+TGG + tig0023238:43275-43294 Msa1406670:intron 60.0%
! TTGCTGCAGCATGGGCTGCA+GGG - tig0023238:45615-45634 None:intergenic 60.0%
!! ACTGCATGGTGGGCAGCTCA+TGG + tig0023238:45778-45797 Msa1406670:CDS 60.0%
!! GCTTTGGGGCAACACCTCTC+TGG - tig0023238:46448-46467 None:intergenic 60.0%
CATTCCGCCCCTGCTTTCCT+TGG - tig0023238:46691-46710 None:intergenic 60.0%
CAAGGAAAGCAGGGGCGGAA+TGG + tig0023238:46689-46708 Msa1406670:CDS 60.0%
CCCAAGAGGATACGCCTGGA+AGG + tig0023238:46738-46757 Msa1406670:CDS 60.0%
CCCTTCCAGGCGTATCCTCT+TGG - tig0023238:46742-46761 None:intergenic 60.0%
AGAGGATACGCCTGGAAGGG+GGG + tig0023238:46742-46761 Msa1406670:CDS 60.0%
GAGGAGAGGGAGGAGTGAGG+TGG - tig0023238:37392-37411 None:intergenic 65.0%
GAGGAGGAGAGGGAGGAGTG+AGG - tig0023238:37395-37414 None:intergenic 65.0%
GCCTAAGGAGGAGGAGAGGG+AGG - tig0023238:37402-37421 None:intergenic 65.0%
CATGAGCAAGGGGGGTGGGA+TGG - tig0023238:37752-37771 None:intergenic 65.0%
!! GTGATGGGCTTGAGCGGGTG+TGG + tig0023238:38950-38969 Msa1406670:intron 65.0%
GGAGAGCTTGGCACCCATGG+CGG - tig0023238:40113-40132 None:intergenic 65.0%
GAGGGAGAGCTTGGCACCCA+TGG - tig0023238:40116-40135 None:intergenic 65.0%
TGGAGGCAGGTGCCCACACA+AGG - tig0023238:41546-41565 None:intergenic 65.0%
! GGGGTGTTCGTGGGTGGGTT+TGG - tig0023238:42098-42117 None:intergenic 65.0%
!! GCGTAGGGGTGTTCGTGGGT+GGG - tig0023238:42103-42122 None:intergenic 65.0%
!! TGCGTAGGGGTGTTCGTGGG+TGG - tig0023238:42104-42123 None:intergenic 65.0%
CGTTTCCTTGGCCGTGGGAG+TGG - tig0023238:42494-42513 None:intergenic 65.0%
!! GGCTGCAGGGTGTTGCAGCA+AGG - tig0023238:45602-45621 None:intergenic 65.0%
! CTTGCTGCAGCATGGGCTGC+AGG - tig0023238:45616-45635 None:intergenic 65.0%
! GTCTGGAGTGGAGCGCACAC+AGG - tig0023238:45811-45830 None:intergenic 65.0%
GAGGCCAAGGAAAGCAGGGG+CGG + tig0023238:46684-46703 Msa1406670:CDS 65.0%
GGGTCCCAAGAGGATACGCC+TGG + tig0023238:46734-46753 Msa1406670:CDS 65.0%
GAGCCGGGTAGGTCCGCCAT+GGG + tig0023238:40097-40116 Msa1406670:intron 70.0%
!! GCACCCATGGCGGACCTACC+CGG - tig0023238:40103-40122 None:intergenic 70.0%
CCTTGGCCGTGGGAGTGGGA+CGG - tig0023238:42489-42508 None:intergenic 70.0%
! GGCGGACCTACCCGGCTCGA+GGG - tig0023238:40095-40114 None:intergenic 75.0%
! TGGCGGACCTACCCGGCTCG+AGG - tig0023238:40096-40115 None:intergenic 75.0%
CGAGCCGGGTAGGTCCGCCA+TGG + tig0023238:40096-40115 Msa1406670:intron 75.0%
CCGTCCCACTCCCACGGCCA+AGG + tig0023238:42486-42505 Msa1406670:intron 75.0%
Chromosome Type Strat End Strand Name
tig0023238 gene 36769 47273 36769 ID=Msa1406670;Name=Msa1406670
tig0023238 mRNA 36769 47273 36769 ID=Msa1406670-mRNA-1;Parent=Msa1406670;Name=Msa1406670-mRNA-1;_AED=0.04;_eAED=0.04;_QI=443|1|1|1|0.42|0.5|8|497|745
tig0023238 exon 36769 37017 36769 ID=Msa1406670-mRNA-1:exon:24659;Parent=Msa1406670-mRNA-1
tig0023238 exon 37097 37122 37097 ID=Msa1406670-mRNA-1:exon:24660;Parent=Msa1406670-mRNA-1
tig0023238 exon 37280 37495 37280 ID=Msa1406670-mRNA-1:exon:24661;Parent=Msa1406670-mRNA-1
tig0023238 exon 37587 37698 37587 ID=Msa1406670-mRNA-1:exon:24662;Parent=Msa1406670-mRNA-1
tig0023238 exon 37775 37836 37775 ID=Msa1406670-mRNA-1:exon:24663;Parent=Msa1406670-mRNA-1
tig0023238 exon 44589 44813 44589 ID=Msa1406670-mRNA-1:exon:24664;Parent=Msa1406670-mRNA-1
tig0023238 exon 44902 46332 44902 ID=Msa1406670-mRNA-1:exon:24665;Parent=Msa1406670-mRNA-1
tig0023238 exon 46417 47273 46417 ID=Msa1406670-mRNA-1:exon:24666;Parent=Msa1406670-mRNA-1
tig0023238 five_prime_UTR 36769 37017 36769 ID=Msa1406670-mRNA-1:five_prime_utr;Parent=Msa1406670-mRNA-1
tig0023238 five_prime_UTR 37097 37122 37097 ID=Msa1406670-mRNA-1:five_prime_utr;Parent=Msa1406670-mRNA-1
tig0023238 five_prime_UTR 37280 37447 37280 ID=Msa1406670-mRNA-1:five_prime_utr;Parent=Msa1406670-mRNA-1
tig0023238 CDS 37448 37495 37448 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 CDS 37587 37698 37587 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 CDS 37775 37836 37775 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 CDS 44589 44813 44589 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 CDS 44902 46332 44902 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 CDS 46417 46776 46417 ID=Msa1406670-mRNA-1:cds;Parent=Msa1406670-mRNA-1
tig0023238 three_prime_UTR 46777 47273 46777 ID=Msa1406670-mRNA-1:three_prime_utr;Parent=Msa1406670-mRNA-1
Gene Sequence

>Msa1406670

ATGGATGCAGCACCAGCATACTCCTCTGGAGAAGACGTCGTTCTCAAGACAAGAAAGCCATATACAATCACAAAACAAAGAGAACGTTGGACAGATGACGAACATAATCGATTTCTAGAAGCCCTCAAGCTATATGGCCGAGCATGGCAGCGTATAGAAGAACATATAGGAACAAAGACTGCTGTGCAAATCAGGAGCCATGCGCAAAAATTCTTTTCAAAGTTGGAGAAGGAAGCACTTGTAAAAGGTGCTGCATTAGGACAAGCTCTTGACATAGACATTCCCCCTCCACGGCCCAAAAGAAAACCAAGCAATCCTTATCCTCGCAAGACCAATGTTGGTACCCCAACATTACATAGTGGAGCAAAGTATGGAAAGCCACTTATTGCAATTGCATCTTCACACGGTAAACAAGCAATGGATTTTGAGAAAGAATCACTTCTAGAGGAGCATAAAGATGAGGAAAGGCCAACGACGGTAAAAGAAAATAACGATGAAAATTGTTTAAAAGTATTAACAGTCCTCAAGGAGGCACCCTGTTCATCTGTATCTTCGGCAATCAAGAGTTCAATCTCAATGTCAGTGCCACAGACAAATTCCTGCACCATAAGGGGGTTTACACCTTCAGTGAAAGAGGTAATAACACGAGATGAAACAAATGAATCTTTTCCTACTACTGAGATTGAAAACCAGATGTTGAAGATAGATGATGGCAAACACACACAAAAGAACGATGGCATTTGTCGAACCTCTAAGTTGGAGAATTGTTCTCCGAAATCGGTTCAATCCGAGAAAACAGATGGTCTTACTTCTGCATTAACAGTTGATGAGATGCAAAGTAATCAGAATTACCCAAGACATATCACTGTGCACGTTGTTGATGGGAACTTTGGAACTAGTATTCAAAGTCCATCACAAAATATGTTGATTCAAGACTCTACATTTCAGCCAATAGGAGGGGGTAATGTGCAGCCTAATCTCTTCGCAAATCCAGCTGCATCAAACACAAGTGAAAATCAAAATAACATGGCACGATCCTCTAGTCATCAATCATTTCCTCCTTGTCCTCCATTTGCACATAACCATGCTGATTACCAATCCTTTCTCAACATGTCTTCTACATTTTCAAGTCTTATTGTCTCTACCTTGCTGCAACACCCTGCAGCCCATGCTGCAGCAAGTTTTGCTGCTACATTTTGGCCGTATGCAAATGTAGAATCTTCAGCTGATTCTCCTGCTTGCTCTCAAGGAGGTTTCCCATCTAGACAAATTGGTTCGCCTCCTAGTGTAACAGCTATTGCAGCTGCTACAGTAGCTGCTGCAACTGCATGGTGGGCAGCTCATGGACTGCTTCCTGTGTGCGCTCCACTCCAGACAGCTTTTGCCTGTCCTCCTGCATCAACAACTGTAGCTCCATCAACAAATATTAGTAAACAACCACCTAAGACAGATCAAGGAGATATTACACTACAAAATCCTCCTCTGCAAGATCAGTTACTAGATCCAGAAAACTCAGAAGCTTTGCAAGCTCAACATTCAGGTTCTAAGTCACCAGCTGTTTCTTCATCTGAATCAGAGGAGAGTGGAGATGCTAAGTTAAATACTTCATCAAAGGCCACTATTAATCTTGATATAAACCAACCAGTTTCTGAGAACCCTGATTCCAACAAAATGGAGGGCAGAAAACTGATAGACCGGTCTTCTTGTGGTTCCAACACAACCTCTAGCTGTGAAGAGACTGATGCGCTAGAGAAGGATGAGAAAGAAAAGGAAGAATGTAAAATACCTGATGCGGATCATTTAGCTACTGATCCTAGTAGTCGTCGATATAGAAGCATTAGCAACCTTCTTGATTCTTGGAAGGAGGTGTCTGAAGAGGGACGACTTGCCTTTCGGGCTCTATTCTCCAGAGAGGTGTTGCCCCAAAGCTTTTCACCTCCTCATGATTTGATAAATAAGGATAATCAGATGGACAACAAAGATCACCTTGAGAGCAAGAAATGCATTTGTAATTGTGACCAGGCACAGCAAAACCTACCGTTTGTACAAAATAACAATGAGGAGGGATTTCTGACCATGGGTCTTGGACAAGGTAAACTTAAGACTCGTCGAACAGGGTTCAAACCTTACAAAAGATGTTTAGTAGAGGCCAAGGAAAGCAGGGGCGGAATGGCTTGCAACCAAGTTGAAGAGACGGGTCCCAAGAGGATACGCCTGGAAGGGGGGACTTCTATTTGA
Protein sequence

>Msa1406670

MDAAPAYSSGEDVVLKTRKPYTITKQRERWTDDEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLEKEALVKGAALGQALDIDIPPPRPKRKPSNPYPRKTNVGTPTLHSGAKYGKPLIAIASSHGKQAMDFEKESLLEEHKDEERPTTVKENNDENCLKVLTVLKEAPCSSVSSAIKSSISMSVPQTNSCTIRGFTPSVKEVITRDETNESFPTTEIENQMLKIDDGKHTQKNDGICRTSKLENCSPKSVQSEKTDGLTSALTVDEMQSNQNYPRHITVHVVDGNFGTSIQSPSQNMLIQDSTFQPIGGGNVQPNLFANPAASNTSENQNNMARSSSHQSFPPCPPFAHNHADYQSFLNMSSTFSSLIVSTLLQHPAAHAAASFAATFWPYANVESSADSPACSQGGFPSRQIGSPPSVTAIAAATVAAATAWWAAHGLLPVCAPLQTAFACPPASTTVAPSTNISKQPPKTDQGDITLQNPPLQDQLLDPENSEALQAQHSGSKSPAVSSSESEESGDAKLNTSSKATINLDINQPVSENPDSNKMEGRKLIDRSSCGSNTTSSCEETDALEKDEKEKEECKIPDADHLATDPSSRRYRSISNLLDSWKEVSEEGRLAFRALFSREVLPQSFSPPHDLINKDNQMDNKDHLESKKCICNCDQAQQNLPFVQNNNEEGFLTMGLGQGKLKTRRTGFKPYKRCLVEAKESRGGMACNQVEETGPKRIRLEGGTSI*