Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429910 | QCE16550.1 | 68.367 | 392 | 80 | 4 | 134 | 481 | 1 | 392 | 4.49e-169 | 507 |
| Msa0429910 | QCE16550.1 | 70.980 | 541 | 113 | 4 | 1 | 497 | 250 | 790 | 0.0 | 758 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429910 | sp|O48723|PLP2_ARATH | 55.980 | 393 | 129 | 4 | 144 | 493 | 10 | 401 | 1.25e-146 | 429 |
| Msa0429910 | sp|O48723|PLP2_ARATH | 59.398 | 133 | 53 | 1 | 2 | 134 | 249 | 380 | 1.08e-43 | 162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429910 | A0A4D6NRM1 | 68.367 | 392 | 80 | 4 | 134 | 481 | 1 | 392 | 2.15e-169 | 507 |
| Msa0429910 | A0A4D6NRM1 | 70.980 | 541 | 113 | 4 | 1 | 497 | 250 | 790 | 0.0 | 758 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0118010 | Msa0429910 | 0.818224 | 2.191866e-52 | -8.615850e-47 |
| Msa0162680 | Msa0429910 | 0.815143 | 1.074952e-51 | -8.615850e-47 |
| Msa0429900 | Msa0429910 | 0.832149 | 1.114665e-55 | -8.615850e-47 |
| Msa0429910 | Msa0500770 | 0.868855 | 4.786684e-66 | -8.615850e-47 |
| Msa0429910 | Msa0650560 | 0.802452 | 5.573658e-49 | -8.615850e-47 |
| Msa0429910 | Msa0740630 | 0.831159 | 1.954662e-55 | -8.615850e-47 |
| Msa0429910 | Msa0746340 | 0.812692 | 3.730145e-51 | -8.615850e-47 |
| Msa0429910 | Msa0820880 | 0.833086 | 6.527994e-56 | -8.615850e-47 |
| Msa0429910 | Msa0859040 | 0.832181 | 1.094736e-55 | -8.615850e-47 |
| Msa0429910 | Msa1027910 | 0.800463 | 1.424549e-48 | -8.615850e-47 |
| Msa0429910 | Msa1084890 | 0.801246 | 9.855322e-49 | -8.615850e-47 |
| Msa0429910 | Msa1131790 | 0.809395 | 1.932792e-50 | -8.615850e-47 |
| Msa0429910 | Msa1184400 | 0.819534 | 1.104032e-52 | -8.615850e-47 |
| Msa0429910 | Msa1224510 | 0.810680 | 1.021977e-50 | -8.615850e-47 |
| Msa0429910 | Msa1246790 | 0.806558 | 7.761561e-50 | -8.615850e-47 |
| Msa0429910 | Msa1399930 | 0.860411 | 2.105011e-63 | -8.615850e-47 |
| Msa0306310 | Msa0429910 | 0.802150 | 6.430581e-49 | -8.615850e-47 |
| Msa0316470 | Msa0429910 | 0.807067 | 6.056222e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429910 | MtrunA17_Chr3g0133691 | 86.308 | 409 | 12 | 4 | 134 | 498 | 1 | 409 | 0.0 | 701 |
| Msa0429910 | MtrunA17_Chr3g0133691 | 84.615 | 143 | 22 | 0 | 1 | 143 | 249 | 391 | 7.11e-80 | 254 |
| Msa0429910 | MtrunA17_Chr3g0133681 | 82.353 | 408 | 29 | 3 | 134 | 498 | 1 | 408 | 0.0 | 650 |
| Msa0429910 | MtrunA17_Chr3g0133681 | 95.105 | 143 | 7 | 0 | 1 | 143 | 249 | 391 | 3.58e-90 | 281 |
| Msa0429910 | MtrunA17_Chr1g0153781 | 70.223 | 403 | 75 | 5 | 137 | 494 | 5 | 407 | 0.0 | 568 |
| Msa0429910 | MtrunA17_Chr1g0153781 | 76.224 | 143 | 34 | 0 | 1 | 143 | 252 | 394 | 7.39e-71 | 231 |
| Msa0429910 | MtrunA17_Chr5g0402441 | 48.974 | 390 | 148 | 7 | 137 | 481 | 3 | 386 | 5.23e-121 | 360 |
| Msa0429910 | MtrunA17_Chr5g0402441 | 52.817 | 142 | 67 | 0 | 3 | 144 | 246 | 387 | 1.80e-44 | 161 |
| Msa0429910 | MtrunA17_Chr5g0402451 | 48.825 | 383 | 149 | 6 | 151 | 487 | 8 | 389 | 7.29e-120 | 357 |
| Msa0429910 | MtrunA17_Chr5g0402451 | 53.846 | 143 | 66 | 0 | 3 | 145 | 243 | 385 | 2.66e-45 | 163 |
| Msa0429910 | MtrunA17_Chr8g0335581 | 41.837 | 392 | 164 | 14 | 143 | 486 | 11 | 386 | 9.67e-78 | 249 |
| Msa0429910 | MtrunA17_Chr8g0335621 | 39.186 | 393 | 173 | 13 | 143 | 486 | 53 | 428 | 1.72e-71 | 234 |
| Msa0429910 | MtrunA17_Chr8g0335611 | 38.931 | 393 | 174 | 13 | 143 | 486 | 22 | 397 | 2.03e-71 | 233 |
| Msa0429910 | MtrunA17_Chr8g0335651 | 41.969 | 386 | 157 | 10 | 143 | 486 | 23 | 383 | 9.10e-66 | 218 |
| Msa0429910 | MtrunA17_Chr8g0335651 | 34.286 | 140 | 88 | 2 | 4 | 143 | 243 | 378 | 1.43e-15 | 78.6 |
| Msa0429910 | MtrunA17_Chr8g0335591 | 36.528 | 386 | 191 | 10 | 143 | 486 | 22 | 395 | 1.07e-62 | 210 |
| Msa0429910 | MtrunA17_Chr8g0335631 | 39.119 | 386 | 179 | 13 | 143 | 486 | 22 | 393 | 1.44e-58 | 199 |
| Msa0429910 | MtrunA17_Chr1g0199801 | 27.638 | 398 | 203 | 17 | 153 | 489 | 75 | 448 | 1.76e-25 | 108 |
| Msa0429910 | MtrunA17_Chr7g0259871 | 25.442 | 283 | 171 | 10 | 155 | 411 | 32 | 300 | 1.56e-16 | 81.3 |
| Msa0429910 | MtrunA17_Chr2g0292051 | 27.445 | 317 | 175 | 15 | 120 | 411 | 33 | 319 | 8.21e-14 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0429910 | AT2G26560.1 | 55.980 | 393 | 129 | 4 | 144 | 493 | 10 | 401 | 1.27e-147 | 429 |
| Msa0429910 | AT2G26560.1 | 59.398 | 133 | 53 | 1 | 2 | 134 | 249 | 380 | 1.10e-44 | 162 |
| Msa0429910 | AT4G37070.2 | 52.699 | 389 | 141 | 3 | 145 | 490 | 11 | 399 | 1.45e-135 | 398 |
| Msa0429910 | AT4G37070.2 | 48.507 | 134 | 69 | 0 | 3 | 136 | 250 | 383 | 4.22e-38 | 144 |
| Msa0429910 | AT4G37050.1 | 51.300 | 423 | 148 | 7 | 125 | 491 | 4 | 424 | 2.70e-130 | 385 |
| Msa0429910 | AT4G37050.1 | 51.471 | 136 | 66 | 0 | 1 | 136 | 272 | 407 | 1.97e-43 | 159 |
| Msa0429910 | AT4G37060.1 | 50.773 | 388 | 148 | 3 | 146 | 490 | 12 | 399 | 4.43e-130 | 384 |
| Msa0429910 | AT4G37060.1 | 46.269 | 134 | 72 | 0 | 3 | 136 | 250 | 383 | 7.75e-36 | 138 |
| Msa0429910 | AT4G37070.3 | 52.011 | 373 | 136 | 3 | 145 | 474 | 11 | 383 | 9.63e-127 | 374 |
| Msa0429910 | AT4G37070.3 | 48.507 | 134 | 69 | 0 | 3 | 136 | 250 | 383 | 3.02e-38 | 144 |
| Msa0429910 | AT4G37070.1 | 52.011 | 373 | 136 | 3 | 145 | 474 | 11 | 383 | 9.63e-127 | 374 |
| Msa0429910 | AT4G37070.1 | 48.507 | 134 | 69 | 0 | 3 | 136 | 250 | 383 | 3.02e-38 | 144 |
| Msa0429910 | AT4G37060.2 | 47.017 | 419 | 148 | 4 | 146 | 490 | 12 | 430 | 1.98e-123 | 368 |
| Msa0429910 | AT4G37060.2 | 46.269 | 134 | 72 | 0 | 3 | 136 | 281 | 414 | 9.06e-36 | 138 |
| Msa0429910 | AT4G37070.4 | 49.866 | 373 | 133 | 4 | 145 | 474 | 11 | 372 | 1.46e-117 | 350 |
| Msa0429910 | AT4G37070.4 | 48.507 | 134 | 69 | 0 | 3 | 136 | 239 | 372 | 2.74e-38 | 144 |
| Msa0429910 | AT5G43590.1 | 47.044 | 389 | 152 | 8 | 145 | 486 | 6 | 387 | 3.66e-95 | 294 |
| Msa0429910 | AT5G43590.1 | 41.304 | 138 | 79 | 1 | 1 | 136 | 238 | 375 | 4.90e-27 | 113 |
| Msa0429910 | AT5G43590.2 | 45.906 | 403 | 164 | 8 | 131 | 486 | 59 | 454 | 1.83e-94 | 295 |
| Msa0429910 | AT5G43590.2 | 41.304 | 138 | 79 | 1 | 1 | 136 | 305 | 442 | 9.53e-27 | 113 |
| Msa0429910 | AT3G54950.1 | 31.325 | 249 | 126 | 10 | 153 | 374 | 98 | 328 | 8.40e-23 | 101 |
| Msa0429910 | AT4G29800.2 | 26.076 | 395 | 223 | 16 | 153 | 493 | 121 | 500 | 1.33e-22 | 101 |
| Msa0429910 | AT4G29800.1 | 26.329 | 395 | 221 | 17 | 153 | 493 | 121 | 499 | 1.91e-22 | 100 |
| Msa0429910 | AT2G39220.1 | 28.276 | 290 | 164 | 12 | 153 | 417 | 108 | 378 | 9.93e-22 | 98.6 |
| Msa0429910 | AT3G63200.1 | 27.935 | 247 | 134 | 10 | 155 | 374 | 32 | 261 | 7.79e-18 | 85.9 |
Find 122 sgRNAs with CRISPR-Local
Find 462 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAATCTTTCTCCAATT+TGG | 0.154529 | 3_2:-81485562 | None:intergenic |
| TCTCTATATTAAAGCATTAT+TGG | 0.161822 | 3_2:-81492092 | None:intergenic |
| TTAGATAAACTTTGCCAAAT+TGG | 0.206887 | 3_2:+81485548 | Msa0429910:CDS |
| CCTCTCTTGAGAAAGTATTT+TGG | 0.229410 | 3_2:-81492041 | None:intergenic |
| TCAACAATTTGTCACCAATT+TGG | 0.229429 | 3_2:-81491845 | None:intergenic |
| ATGTTTGAGCCTATTGAAAA+TGG | 0.238787 | 3_2:+81485620 | Msa0429910:CDS |
| GGCAGCAAAATGGGGTCTTT+TGG | 0.249313 | 3_2:+81485250 | Msa0429910:CDS |
| ATGTTTGAGCCAATTGAAAA+TGG | 0.253040 | 3_2:+81491903 | Msa0429910:CDS |
| ATTCAAAACTGGCAGCAAAA+TGG | 0.257627 | 3_2:+81485240 | Msa0429910:CDS |
| TTGACTAAAGATATCAATTA+AGG | 0.272567 | 3_2:-81485300 | None:intergenic |
| AGGTATTTCCCATCATATTT+TGG | 0.273356 | 3_2:-81490981 | None:intergenic |
| TTGACTAAACATGTCGATTA+AGG | 0.277813 | 3_2:-81491589 | None:intergenic |
| ATGCGAAAATGGCAGCAAAA+TGG | 0.281352 | 3_2:+81491529 | Msa0429910:CDS |
| GGAGAGTGTTCCAAGTAAAA+TGG | 0.292232 | 3_2:-81490811 | None:intergenic |
| TAGTCAATCATCAGCTGATA+TGG | 0.302481 | 3_2:+81491605 | Msa0429910:CDS |
| GTATCGATGGTGGCGGCATT+AGG | 0.306980 | 3_2:+81490602 | Msa0429910:CDS |
| ATTGAAGAAACCAGTATCTA+AGG | 0.307953 | 3_2:+81485580 | Msa0429910:CDS |
| CACAAACACCGCCGTCAATA+AGG | 0.313302 | 3_2:-81491250 | None:intergenic |
| TATCGATGGTGGCGGCATTA+GGG | 0.321921 | 3_2:+81490603 | Msa0429910:CDS |
| TTCAAAACTGGCAGCAAAAT+GGG | 0.322622 | 3_2:+81485241 | Msa0429910:CDS |
| TGCGAAAATGGCAGCAAAAT+GGG | 0.333561 | 3_2:+81491530 | Msa0429910:CDS |
| TCTAAATTAACCTTAGATAC+TGG | 0.337016 | 3_2:-81485590 | None:intergenic |
| GTGTGTTGCCTTCTGTATCT+TGG | 0.340354 | 3_2:-81491217 | None:intergenic |
| TTGTGTTGTGGGAAGATCTT+AGG | 0.341209 | 3_2:-81490832 | None:intergenic |
| GATTACTTTGATGTGATTAC+AGG | 0.344649 | 3_2:+81490703 | Msa0429910:CDS |
| TTGATAATCTCACTGGGAAC+TGG | 0.346036 | 3_2:+81491480 | Msa0429910:CDS |
| TAGTCAATCCTCTGGAGATA+TGG | 0.353427 | 3_2:+81485316 | Msa0429910:CDS |
| ATTATATTCCATAGGCTTGA+TGG | 0.369030 | 3_2:-81491451 | None:intergenic |
| ATTCTTGAAGTTGCGATTCA+AGG | 0.379087 | 3_2:-81490654 | None:intergenic |
| ACAAAAGTTTGATTCAAAAC+TGG | 0.388763 | 3_2:+81485229 | Msa0429910:CDS |
| GGCAGCAAAATGGGGTCTGC+TGG | 0.394148 | 3_2:+81491539 | Msa0429910:CDS |
| TGAAGTGGTAAGGGAGAAGT+TGG | 0.397346 | 3_2:+81491007 | Msa0429910:CDS |
| GATGATATTTCAGACTTTAG+TGG | 0.399940 | 3_2:+81491377 | Msa0429910:intron |
| GAAATCATGCAGGGACTTGT+TGG | 0.405013 | 3_2:+81490923 | Msa0429910:intron |
| GTTGAAGAAACCAGTCTCTA+AGG | 0.407068 | 3_2:+81491863 | Msa0429910:CDS |
| CAAAATGGGGTCTGCTGGAT+TGG | 0.411164 | 3_2:+81491544 | Msa0429910:CDS |
| GCTGCACCTACATATCTTCC+AGG | 0.418184 | 3_2:+81491179 | Msa0429910:CDS |
| TGTTTGAGCCTATTGAAAAT+GGG | 0.427789 | 3_2:+81485621 | Msa0429910:CDS |
| TCTAAGGTTAATTTAGAGAA+TGG | 0.429460 | 3_2:+81485596 | Msa0429910:CDS |
| GAAGTGGTAAGGGAGAAGTT+GGG | 0.431386 | 3_2:+81491008 | Msa0429910:CDS |
| CTAATAATCTCATTGGGCAC+TGG | 0.438749 | 3_2:+81485191 | Msa0429910:CDS |
| CAGATTCAGCCTCCCACCTA+TGG | 0.440384 | 3_2:+81490559 | Msa0429910:CDS |
| TGTTTGAGCCAATTGAAAAT+GGG | 0.441270 | 3_2:+81491904 | Msa0429910:CDS |
| AAATCATGCAGGGACTTGTT+GGG | 0.443086 | 3_2:+81490924 | Msa0429910:intron |
| AAATTATTCAGATCATTAGT+AGG | 0.450532 | 3_2:+81490957 | Msa0429910:CDS |
| AGGAACTCGAGGATAGTTGC+AGG | 0.459678 | 3_2:-81490634 | None:intergenic |
| ATTGTCAAGATAATTACCTT+AGG | 0.462195 | 3_2:+81485375 | Msa0429910:CDS |
| CTTCTATGCCATCAAGCCTA+TGG | 0.470246 | 3_2:+81491443 | Msa0429910:CDS |
| GCCTCCCACCTATGGAAACT+TGG | 0.472414 | 3_2:+81490567 | Msa0429910:CDS |
| CCAAAATACTTTCTCAAGAG+AGG | 0.474475 | 3_2:+81492041 | Msa0429910:CDS |
| CAGGGACTTGTTGGGATCAG+TGG | 0.475838 | 3_2:+81490932 | Msa0429910:intron |
| TCGCTTCTTGATAATCTCAC+TGG | 0.476342 | 3_2:+81491473 | Msa0429910:CDS |
| GATATCTTTAGTCAATCCTC+TGG | 0.480270 | 3_2:+81485308 | Msa0429910:CDS |
| AGATAATTACCTTAGGATAC+AGG | 0.480809 | 3_2:+81485382 | Msa0429910:CDS |
| GATATACGTACTTGTGTTGT+GGG | 0.481161 | 3_2:-81490843 | None:intergenic |
| TGACTAAACATGTCGATTAA+GGG | 0.483825 | 3_2:-81491588 | None:intergenic |
| CATGAATTCAACCTTATTGA+CGG | 0.485875 | 3_2:+81491239 | Msa0429910:CDS |
| AATACCTTCATGAAGTGGTA+AGG | 0.488193 | 3_2:+81490997 | Msa0429910:CDS |
| TCTAAGGTCAATTTAGAGAA+TGG | 0.490927 | 3_2:+81491879 | Msa0429910:CDS |
| CCAATGAGATTATTAGAAAA+CGG | 0.491994 | 3_2:-81485184 | None:intergenic |
| TTAGTAGGACCAAAATATGA+TGG | 0.496410 | 3_2:+81490972 | Msa0429910:CDS |
| AAGTGGTAAGGGAGAAGTTG+GGG | 0.499535 | 3_2:+81491009 | Msa0429910:CDS |
| TGACTAAAGATATCAATTAA+GGG | 0.500555 | 3_2:-81485299 | None:intergenic |
| CTAACCAAGAAGCTCTCAAA+AGG | 0.500687 | 3_2:+81491931 | Msa0429910:CDS |
| AGGGACTTGTTGGGATCAGT+GGG | 0.501975 | 3_2:+81490933 | Msa0429910:intron |
| TCTAAATTGACCTTAGAGAC+TGG | 0.503415 | 3_2:-81491873 | None:intergenic |
| CCAACCAAGAAGCTCTCAAA+AGG | 0.511212 | 3_2:+81485648 | Msa0429910:CDS |
| GATCAAGAAAACCCCTTGCA+TGG | 0.513274 | 3_2:+81491121 | Msa0429910:intron |
| TTAAAGCATTATTGGTGTGA+GGG | 0.513489 | 3_2:-81492084 | None:intergenic |
| CGCTTCTTGATAATCTCACT+GGG | 0.516348 | 3_2:+81491474 | Msa0429910:CDS |
| AGAAAACGGCTATATTCCAT+TGG | 0.517022 | 3_2:-81485170 | None:intergenic |
| TTGTAGCCTGGAAGATATGT+AGG | 0.518439 | 3_2:-81491185 | None:intergenic |
| TTTGTATTACCTGTATCCTA+AGG | 0.533834 | 3_2:-81485391 | None:intergenic |
| TGGTTCTTGAAATTGTAGCC+TGG | 0.542827 | 3_2:-81491197 | None:intergenic |
| CTTGAGTAACAGTAGCAAGA+TGG | 0.544501 | 3_2:-81485346 | None:intergenic |
| TAAAGCATTATTGGTGTGAG+GGG | 0.552577 | 3_2:-81492083 | None:intergenic |
| AGTCACCAAGTTTCCATAGG+TGG | 0.554860 | 3_2:-81490572 | None:intergenic |
| TGATAATCTCACTGGGAACT+GGG | 0.560211 | 3_2:+81491481 | Msa0429910:CDS |
| ATCAACTGAAGAATCTGTAC+CGG | 0.561415 | 3_2:-81485507 | None:intergenic |
| TATAGTCACCAAGTTTCCAT+AGG | 0.562234 | 3_2:-81490575 | None:intergenic |
| AGATATACGTACTTGTGTTG+TGG | 0.562759 | 3_2:-81490844 | None:intergenic |
| GCGAAAATGGCAGCAAAATG+GGG | 0.566216 | 3_2:+81491531 | Msa0429910:CDS |
| AATGCAGGATGATACATTGA+CGG | 0.567386 | 3_2:+81491770 | Msa0429910:intron |
| ATTAAAGCATTATTGGTGTG+AGG | 0.572481 | 3_2:-81492085 | None:intergenic |
| GTCACCAAGTTTCCATAGGT+GGG | 0.573182 | 3_2:-81490571 | None:intergenic |
| GAGAGTCGAGCATCCATGCA+AGG | 0.575822 | 3_2:-81491134 | None:intergenic |
| TAGTAGGACCAAAATATGAT+GGG | 0.575853 | 3_2:+81490973 | Msa0429910:CDS |
| TCTCCCTTACCACTTCATGA+AGG | 0.576054 | 3_2:-81491001 | None:intergenic |
| ATACCTTCATGAAGTGGTAA+GGG | 0.581117 | 3_2:+81490998 | Msa0429910:CDS |
| ATCGATGGTGGCGGCATTAG+GGG | 0.586031 | 3_2:+81490604 | Msa0429910:CDS |
| CTGCTGGATTGGTTAACTCA+CGG | 0.586370 | 3_2:+81491555 | Msa0429910:CDS |
| AGAGTCGAGCATCCATGCAA+GGG | 0.586931 | 3_2:-81491133 | None:intergenic |
| ATGCAGGATGATACATTGAC+GGG | 0.587863 | 3_2:+81491771 | Msa0429910:intron |
| AATTAGACGGTGAATCTGCT+AGG | 0.587927 | 3_2:+81490674 | Msa0429910:CDS |
| GTTTGAGCCAATTGAAAATG+GGG | 0.588730 | 3_2:+81491905 | Msa0429910:CDS |
| TGTGAGGGGATTTCAACTCT+CGG | 0.590652 | 3_2:-81492069 | None:intergenic |
| AAGAAGCGATTATATTCCAT+AGG | 0.592377 | 3_2:-81491459 | None:intergenic |
| GTTTGAGCCTATTGAAAATG+GGG | 0.597788 | 3_2:+81485622 | Msa0429910:CDS |
| ATGCAGGATGATACATTGAC+CGG | 0.600764 | 3_2:+81485488 | Msa0429910:intron |
| TCAAAACTGGCAGCAAAATG+GGG | 0.603239 | 3_2:+81485242 | Msa0429910:CDS |
| CGGTGTTTGTGCAAATAACC+CGG | 0.607334 | 3_2:+81491262 | Msa0429910:CDS |
| TGGGAAATACCTTCATGAAG+TGG | 0.608258 | 3_2:+81490992 | Msa0429910:CDS |
| GTGACTATACTAAGTATCGA+TGG | 0.613910 | 3_2:+81490589 | Msa0429910:CDS |
| TTCAAGAACCAAGATACAGA+AGG | 0.625819 | 3_2:+81491209 | Msa0429910:CDS |
| AAGATATGTAGGTGCAGCAG+AGG | 0.629508 | 3_2:-81491174 | None:intergenic |
| ATACTAAGTATCGATGGTGG+CGG | 0.632401 | 3_2:+81490595 | Msa0429910:CDS |
| GTTGCGATTCAAGGAACTCG+AGG | 0.637528 | 3_2:-81490645 | None:intergenic |
| CTAAGAATTTGCAAGCAATG+AGG | 0.644090 | 3_2:-81492122 | None:intergenic |
| TAAGGGAGTTGAACCACCGT+GGG | 0.644389 | 3_2:-81485282 | None:intergenic |
| AAATGTGGGAATCACAATGT+TGG | 0.650439 | 3_2:-81491057 | None:intergenic |
| AGTGGTAAGGGAGAAGTTGG+GGG | 0.653344 | 3_2:+81491010 | Msa0429910:CDS |
| TCGCAACTTCAAGAATTAGA+CGG | 0.655679 | 3_2:+81490661 | Msa0429910:CDS |
| AAATACTTTCTCAAGAGAGG+AGG | 0.656017 | 3_2:+81492044 | Msa0429910:CDS |
| GAAATCAACCATATCTCCAG+AGG | 0.656859 | 3_2:-81485324 | None:intergenic |
| ACCAAGTTTCCATAGGTGGG+AGG | 0.664617 | 3_2:-81490568 | None:intergenic |
| GAGTCGAGCATCCATGCAAG+GGG | 0.676762 | 3_2:-81491132 | None:intergenic |
| TTAAGGGAGTTGAACCACCG+TGG | 0.712500 | 3_2:-81485283 | None:intergenic |
| GAATTCAACCTTATTGACGG+CGG | 0.715959 | 3_2:+81491242 | Msa0429910:CDS |
| ACTATACTAAGTATCGATGG+TGG | 0.718258 | 3_2:+81490592 | Msa0429910:CDS |
| CTGGATTGGTTAACTCACGG+TGG | 0.721558 | 3_2:+81491558 | Msa0429910:CDS |
| TTGGATTGGTTAACCCACGG+TGG | 0.722351 | 3_2:+81485269 | Msa0429910:CDS |
| GGGACTTGTTGGGATCAGTG+GGG | 0.764722 | 3_2:+81490934 | Msa0429910:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAATTAATACAATACAT+GGG | - | chr3_2:81486674-81486693 | None:intergenic | 10.0% |
| !!! | TATTTAGTAAATTTTGTTTT+AGG | - | chr3_2:81486878-81486897 | None:intergenic | 10.0% |
| !! | ATAGAGTAATAATATTATTA+AGG | + | chr3_2:81488202-81488221 | Msa0429910:intron | 10.0% |
| !! | TAGAGTAATAATATTATTAA+GGG | + | chr3_2:81488203-81488222 | Msa0429910:intron | 10.0% |
| !!! | AAAAAATTCTAACTTTTTTT+GGG | - | chr3_2:81488517-81488536 | None:intergenic | 10.0% |
| !!! | TAAAAAATTCTAACTTTTTT+TGG | - | chr3_2:81488518-81488537 | None:intergenic | 10.0% |
| !!! | TAAATATGAATTTTTATGTT+TGG | + | chr3_2:81488551-81488570 | Msa0429910:intron | 10.0% |
| !! | ACAAAAATTTACTTAAAAAT+AGG | + | chr3_2:81488680-81488699 | Msa0429910:intron | 10.0% |
| !! | CAAAAATTTACTTAAAAATA+GGG | + | chr3_2:81488681-81488700 | Msa0429910:intron | 10.0% |
| !!! | ATTAGGTTAATTAAATTTTA+AGG | - | chr3_2:81488914-81488933 | None:intergenic | 10.0% |
| !!! | TTATTTATAAGAAATTTTGT+TGG | + | chr3_2:81489498-81489517 | Msa0429910:intron | 10.0% |
| !! | AAAAAATCCTATTAAAATAT+AGG | - | chr3_2:81489633-81489652 | None:intergenic | 10.0% |
| !!! | AATATAAGAATTTGATTTAT+CGG | - | chr3_2:81490055-81490074 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTTACAAAATGT+TGG | - | chr3_2:81490884-81490903 | None:intergenic | 10.0% |
| !! | AATATTTATAGTATATATAC+CGG | - | chr3_2:81491284-81491303 | None:intergenic | 10.0% |
| !! | TCATTCAATGATTATATTTA+TGG | + | chr3_2:81485681-81485700 | Msa0429910:intron | 15.0% |
| !!! | ATTTTTCTACATTTTTTTTG+AGG | - | chr3_2:81485732-81485751 | None:intergenic | 15.0% |
| !!! | TTTGTATTTATAATTTGTGT+TGG | + | chr3_2:81485977-81485996 | Msa0429910:intron | 15.0% |
| !! | TTTATTAAAGAGAGTTTATT+TGG | + | chr3_2:81486244-81486263 | Msa0429910:intron | 15.0% |
| !! | ATTTAGAGAGTTTATTAAAA+CGG | + | chr3_2:81486277-81486296 | Msa0429910:intron | 15.0% |
| !! | ATAAGTTAGTAGTATTAATT+AGG | + | chr3_2:81486508-81486527 | Msa0429910:intron | 15.0% |
| !! | TAAGTTAGTAGTATTAATTA+GGG | + | chr3_2:81486509-81486528 | Msa0429910:intron | 15.0% |
| !! | CATTTAATTAATACAATACA+TGG | - | chr3_2:81486675-81486694 | None:intergenic | 15.0% |
| !! | TGTGTATGTATAAAAATTAA+TGG | + | chr3_2:81487318-81487337 | Msa0429910:intron | 15.0% |
| !! | TGTATAAAAATTAATGGTAA+TGG | + | chr3_2:81487324-81487343 | Msa0429910:intron | 15.0% |
| !! | TTATGAAATAAAAGAATGTT+GGG | - | chr3_2:81487612-81487631 | None:intergenic | 15.0% |
| !! | TTTATGAAATAAAAGAATGT+TGG | - | chr3_2:81487613-81487632 | None:intergenic | 15.0% |
| !!! | ATATTTTTATTTTTTTCCTC+AGG | + | chr3_2:81488058-81488077 | Msa0429910:intron | 15.0% |
| !! | GAAAAGTTAGTATATTTATA+AGG | + | chr3_2:81488772-81488791 | Msa0429910:intron | 15.0% |
| !!! | GATTAAATATTCAAGTTATT+AGG | - | chr3_2:81488931-81488950 | None:intergenic | 15.0% |
| !!! | AAACAGGTTATTTTTTTATA+AGG | + | chr3_2:81489551-81489570 | Msa0429910:intron | 15.0% |
| !!! | AACAGGTTATTTTTTTATAA+GGG | + | chr3_2:81489552-81489571 | Msa0429910:intron | 15.0% |
| !!! | GTGCTTAAAATATTAATTTT+AGG | + | chr3_2:81489986-81490005 | Msa0429910:intron | 15.0% |
| !! | TTAATATAAATCATCAATAG+TGG | - | chr3_2:81490019-81490038 | None:intergenic | 15.0% |
| !! | GTTTATAAATATTAATTGGT+TGG | - | chr3_2:81490417-81490436 | None:intergenic | 15.0% |
| !! | GAAGGTTTATAAATATTAAT+TGG | - | chr3_2:81490421-81490440 | None:intergenic | 15.0% |
| !! | TTATAAGATGAGAAAATAAT+TGG | - | chr3_2:81491101-81491120 | None:intergenic | 15.0% |
| !! | ATATTTATAGTATATATACC+GGG | - | chr3_2:81491283-81491302 | None:intergenic | 15.0% |
| !! | TGACTAAAGATATCAATTAA+GGG | - | chr3_2:81485302-81485321 | None:intergenic | 20.0% |
| !! | TTGACTAAAGATATCAATTA+AGG | - | chr3_2:81485303-81485322 | None:intergenic | 20.0% |
| !!! | TTTATCTAAATTCTCTTTTG+TGG | - | chr3_2:81485537-81485556 | None:intergenic | 20.0% |
| !! | TTTAATACACATACAAACAA+AGG | - | chr3_2:81486467-81486486 | None:intergenic | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | + | chr3_2:81486510-81486529 | Msa0429910:intron | 20.0% |
| !! | GGACAAAAATAAAATCAAAT+GGG | + | chr3_2:81486592-81486611 | Msa0429910:intron | 20.0% |
| !!! | TTTTACTAATTTAACAAGAG+TGG | - | chr3_2:81487118-81487137 | None:intergenic | 20.0% |
| !! | AACATAGTAGAAATATAAGA+TGG | - | chr3_2:81487249-81487268 | None:intergenic | 20.0% |
| !! | AAATAAGATAAGTTTCTTTG+TGG | + | chr3_2:81487277-81487296 | Msa0429910:intron | 20.0% |
| !! | CAAAACAAAACAATGTAATT+TGG | - | chr3_2:81487454-81487473 | None:intergenic | 20.0% |
| !! | GATGAATGATTGATATTAAA+TGG | - | chr3_2:81487514-81487533 | None:intergenic | 20.0% |
| !!! | TTAGTCATTTTTCAACAAAT+GGG | - | chr3_2:81487800-81487819 | None:intergenic | 20.0% |
| !!! | TTTAGTCATTTTTCAACAAA+TGG | - | chr3_2:81487801-81487820 | None:intergenic | 20.0% |
| !!! | GAAATGAAAGTTGATATATT+TGG | - | chr3_2:81488249-81488268 | None:intergenic | 20.0% |
| !!! | TCTAGGGTTAAATATATTTT+TGG | + | chr3_2:81488313-81488332 | Msa0429910:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTTTA+GGG | - | chr3_2:81488340-81488359 | None:intergenic | 20.0% |
| !!! | TGAAAAGTTGGTATATTTTT+AGG | - | chr3_2:81488341-81488360 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | chr3_2:81488431-81488450 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | chr3_2:81488432-81488451 | None:intergenic | 20.0% |
| !!! | ATATGAATTTTTATGTTTGG+TGG | + | chr3_2:81488554-81488573 | Msa0429910:intron | 20.0% |
| !!! | TAGTGGTTGAAAATTTTATA+GGG | + | chr3_2:81488712-81488731 | Msa0429910:intron | 20.0% |
| !!! | AAATGCGTTAAATATCTTTT+TGG | - | chr3_2:81488799-81488818 | None:intergenic | 20.0% |
| !!! | AAGCGTAATTTATCTAAAAT+TGG | + | chr3_2:81489373-81489392 | Msa0429910:intron | 20.0% |
| !!! | AGCGTAATTTATCTAAAATT+GGG | + | chr3_2:81489374-81489393 | Msa0429910:intron | 20.0% |
| !!! | TTTTTTAAACTAAAACGATG+AGG | - | chr3_2:81489402-81489421 | None:intergenic | 20.0% |
| !!! | ATTTTGTACAGAAAAAAAAC+AGG | + | chr3_2:81489535-81489554 | Msa0429910:intron | 20.0% |
| !!! | TTTAGAGCCTATATTTTAAT+AGG | + | chr3_2:81489623-81489642 | Msa0429910:intron | 20.0% |
| !! | ACGACATAATATAATATTGA+AGG | + | chr3_2:81490218-81490237 | Msa0429910:intron | 20.0% |
| !! | TATGGAATCAAATATATGTT+TGG | - | chr3_2:81490512-81490531 | None:intergenic | 20.0% |
| !! | ACATATATTTGATTCCATAA+TGG | + | chr3_2:81490513-81490532 | Msa0429910:intron | 20.0% |
| !!! | ATAAATATTTGAAATCATGC+AGG | + | chr3_2:81490913-81490932 | Msa0429910:intron | 20.0% |
| !!! | TAAATATTTGAAATCATGCA+GGG | + | chr3_2:81490914-81490933 | Msa0429910:intron | 20.0% |
| !! | AAATTATTCAGATCATTAGT+AGG | + | chr3_2:81490957-81490976 | Msa0429910:CDS | 20.0% |
| !!! | ATTGTTTTTATGTCAAATGT+GGG | - | chr3_2:81491074-81491093 | None:intergenic | 20.0% |
| !! | TTTGCAAGTTAAATAAAGTT+TGG | - | chr3_2:81491329-81491348 | None:intergenic | 20.0% |
| !!! | TGACTAATTAGTTTTGTTTT+TGG | + | chr3_2:81491353-81491372 | Msa0429910:intron | 20.0% |
| !!! | TTGAATTTTTGTTCATTCTT+GGG | - | chr3_2:81491510-81491529 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGTTCATTCT+TGG | - | chr3_2:81491511-81491530 | None:intergenic | 20.0% |
| !! | TAATTGTGTATTAAAAATGC+AGG | + | chr3_2:81491755-81491774 | Msa0429910:intron | 20.0% |
| !!! | TTTTTCTAAATTCTCTTTTG+TGG | - | chr3_2:81491820-81491839 | None:intergenic | 20.0% |
| !!! | TCTCTATATTAAAGCATTAT+TGG | - | chr3_2:81492095-81492114 | None:intergenic | 20.0% |
| ! | CCAATGAGATTATTAGAAAA+CGG | - | chr3_2:81485187-81485206 | None:intergenic | 25.0% |
| !! | CGTTTTCTAATAATCTCATT+GGG | + | chr3_2:81485185-81485204 | Msa0429910:CDS | 25.0% |
| !! | TCAAACTTTTGTTCATTCTT+TGG | - | chr3_2:81485221-81485240 | None:intergenic | 25.0% |
| ! | ACAAAAGTTTGATTCAAAAC+TGG | + | chr3_2:81485229-81485248 | Msa0429910:CDS | 25.0% |
| ! | ATTGTCAAGATAATTACCTT+AGG | + | chr3_2:81485375-81485394 | Msa0429910:CDS | 25.0% |
| ! | TTAGATAAACTTTGCCAAAT+TGG | + | chr3_2:81485548-81485567 | Msa0429910:CDS | 25.0% |
| ! | TCAATAATCTTTCTCCAATT+TGG | - | chr3_2:81485565-81485584 | None:intergenic | 25.0% |
| ! | TCTAAATTAACCTTAGATAC+TGG | - | chr3_2:81485593-81485612 | None:intergenic | 25.0% |
| !! | TCTAAGGTTAATTTAGAGAA+TGG | + | chr3_2:81485596-81485615 | Msa0429910:CDS | 25.0% |
| !! | ATAATTTGTGTTGGATTCAA+TGG | + | chr3_2:81485986-81486005 | Msa0429910:intron | 25.0% |
| ! | AAGCAATGGATATAAAGAAA+AGG | + | chr3_2:81486019-81486038 | Msa0429910:intron | 25.0% |
| ! | AGAAATGTGAAAAATGCAAA+GGG | - | chr3_2:81486384-81486403 | None:intergenic | 25.0% |
| ! | AAGAAATGTGAAAAATGCAA+AGG | - | chr3_2:81486385-81486404 | None:intergenic | 25.0% |
| !! | TATTAATTAGGGGTATGTTT+AGG | + | chr3_2:81486520-81486539 | Msa0429910:intron | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | + | chr3_2:81486556-81486575 | Msa0429910:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | + | chr3_2:81486557-81486576 | Msa0429910:intron | 25.0% |
| ! | GGGACAAAAATAAAATCAAA+TGG | + | chr3_2:81486591-81486610 | Msa0429910:intron | 25.0% |
| ! | CAAAAATAAAATCAAATGGG+TGG | + | chr3_2:81486595-81486614 | Msa0429910:intron | 25.0% |
| !! | TTGACAAATAAGTTGGATAA+AGG | - | chr3_2:81486648-81486667 | None:intergenic | 25.0% |
| ! | AATTAAATGCCTAGATATGA+CGG | + | chr3_2:81486686-81486705 | Msa0429910:intron | 25.0% |
| ! | CAAACTTATCACAAATTATG+TGG | - | chr3_2:81486714-81486733 | None:intergenic | 25.0% |
| !!! | TAAATTTTGTTTTAGGTGCT+GGG | - | chr3_2:81486871-81486890 | None:intergenic | 25.0% |
| !!! | TCTCTCTCTTTAATTTTTGT+GGG | - | chr3_2:81486974-81486993 | None:intergenic | 25.0% |
| ! | ACAAAAATTAAAGAGAGAGA+GGG | + | chr3_2:81486974-81486993 | Msa0429910:intron | 25.0% |
| !! | CTTATATTTCTACTATGTTG+AGG | + | chr3_2:81487250-81487269 | Msa0429910:intron | 25.0% |
| ! | GAATAAAATGTAAAAGAGTG+AGG | + | chr3_2:81487423-81487442 | Msa0429910:intron | 25.0% |
| ! | TAGCTAGAATTTACTTCTTA+AGG | + | chr3_2:81488093-81488112 | Msa0429910:intron | 25.0% |
| ! | TACTTCTTAAGGTAAATAAC+CGG | + | chr3_2:81488104-81488123 | Msa0429910:intron | 25.0% |
| ! | TTAACCCTAGAAAAATTAGA+GGG | - | chr3_2:81488304-81488323 | None:intergenic | 25.0% |
| ! | TTTAACCCTAGAAAAATTAG+AGG | - | chr3_2:81488305-81488324 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr3_2:81488741-81488760 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr3_2:81488740-81488759 | None:intergenic | 25.0% |
| !!! | CAAAGATGGAAATTTTTTTG+AGG | - | chr3_2:81488400-81488419 | None:intergenic | 25.0% |
| !! | AAAATTTCCATCTTTGCTTT+TGG | + | chr3_2:81488404-81488423 | Msa0429910:intron | 25.0% |
| !! | AAATTTTCAACCACTACTTT+TGG | - | chr3_2:81488708-81488727 | None:intergenic | 25.0% |
| !! | GTAGTGGTTGAAAATTTTAT+AGG | + | chr3_2:81488711-81488730 | Msa0429910:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr3_2:81488740-81488759 | Msa0429910:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr3_2:81488741-81488760 | Msa0429910:intron | 25.0% |
| ! | TAGTTATCAGATGTGTATTT+AGG | + | chr3_2:81488994-81489013 | Msa0429910:intron | 25.0% |
| ! | AGTTATCAGATGTGTATTTA+GGG | + | chr3_2:81488995-81489014 | Msa0429910:intron | 25.0% |
| ! | ACAATTGGATATTTCTCTTT+AGG | - | chr3_2:81489039-81489058 | None:intergenic | 25.0% |
| ! | AGAAATATCCAATTGTTGTA+GGG | + | chr3_2:81489043-81489062 | Msa0429910:intron | 25.0% |
| !!! | TTATATGTGTGTTGATTCAT+TGG | - | chr3_2:81489237-81489256 | None:intergenic | 25.0% |
| !! | TAGATAAATTACGCTTGTTA+TGG | - | chr3_2:81489369-81489388 | None:intergenic | 25.0% |
| ! | TAGTTAGAGCTGTTAAAATA+TGG | - | chr3_2:81489714-81489733 | None:intergenic | 25.0% |
| !! | TGATTTCTTTGATGATATTG+TGG | - | chr3_2:81489839-81489858 | None:intergenic | 25.0% |
| ! | TTTGAACCATTTAATGTTGA+TGG | + | chr3_2:81489903-81489922 | Msa0429910:intron | 25.0% |
| ! | TGCTAAAATAGAAAAACACA+GGG | - | chr3_2:81489956-81489975 | None:intergenic | 25.0% |
| ! | ATGCTAAAATAGAAAAACAC+AGG | - | chr3_2:81489957-81489976 | None:intergenic | 25.0% |
| ! | TGATGACTATTTCAACAAAA+AGG | + | chr3_2:81490092-81490111 | Msa0429910:intron | 25.0% |
| !! | TTTAAACTTTTGATCCCTTT+TGG | + | chr3_2:81490128-81490147 | Msa0429910:intron | 25.0% |
| ! | TATTACAAGGTAAACCAAAA+GGG | - | chr3_2:81490145-81490164 | None:intergenic | 25.0% |
| !! | TTACTTCATAAACTTGGTTT+TGG | - | chr3_2:81490168-81490187 | None:intergenic | 25.0% |
| ! | TTCAGTCGAATTGTATTTAT+AGG | - | chr3_2:81490335-81490354 | None:intergenic | 25.0% |
| !!! | TTTGGAATTAAGTTGAAGTT+TGG | - | chr3_2:81490494-81490513 | None:intergenic | 25.0% |
| !!! | CATTGTTTTTATGTCAAATG+TGG | - | chr3_2:81491075-81491094 | None:intergenic | 25.0% |
| ! | ACAAAAATTCAATGCGAAAA+TGG | + | chr3_2:81491518-81491537 | Msa0429910:CDS | 25.0% |
| ! | ATTCACAACATAATTACCTA+CGG | + | chr3_2:81491664-81491683 | Msa0429910:intron | 25.0% |
| ! | TTAGTAGTGTTTACATATGT+GGG | - | chr3_2:81491713-81491732 | None:intergenic | 25.0% |
| ! | ATTAGTAGTGTTTACATATG+TGG | - | chr3_2:81491714-81491733 | None:intergenic | 25.0% |
| ! | TTAGAAAAACTTTGCCAAAT+TGG | + | chr3_2:81491831-81491850 | Msa0429910:CDS | 25.0% |
| !!! | ACATTTGTTTTAATCTTTGC+AGG | + | chr3_2:81492014-81492033 | Msa0429910:intron | 25.0% |
| ! | CCGTTTTCTAATAATCTCAT+TGG | + | chr3_2:81485184-81485203 | Msa0429910:CDS | 30.0% |
| AGATAATTACCTTAGGATAC+AGG | + | chr3_2:81485382-81485401 | Msa0429910:CDS | 30.0% | |
| TTTGTATTACCTGTATCCTA+AGG | - | chr3_2:81485394-81485413 | None:intergenic | 30.0% | |
| ACGATATGAGAATTGAGAAA+TGG | - | chr3_2:81485462-81485481 | None:intergenic | 30.0% | |
| CTCATATCGTATAAAAATGC+AGG | + | chr3_2:81485472-81485491 | Msa0429910:intron | 30.0% | |
| ATTGAAGAAACCAGTATCTA+AGG | + | chr3_2:81485580-81485599 | Msa0429910:CDS | 30.0% | |
| ATGTTTGAGCCTATTGAAAA+TGG | + | chr3_2:81485620-81485639 | Msa0429910:CDS | 30.0% | |
| TGTTTGAGCCTATTGAAAAT+GGG | + | chr3_2:81485621-81485640 | Msa0429910:CDS | 30.0% | |
| ! | AGCTCTCAAAAGGTATATTA+TGG | + | chr3_2:81485658-81485677 | Msa0429910:intron | 30.0% |
| ATATCAACATTAATGCATGC+AGG | + | chr3_2:81485777-81485796 | Msa0429910:intron | 30.0% | |
| CAAAAATACTATCACAAGAG+AGG | + | chr3_2:81485804-81485823 | Msa0429910:intron | 30.0% | |
| !! | TTTTGTCCTTAAGCTAGTTT+TGG | + | chr3_2:81485919-81485938 | Msa0429910:intron | 30.0% |
| !!! | TTTGTCCTTAAGCTAGTTTT+GGG | + | chr3_2:81485920-81485939 | Msa0429910:intron | 30.0% |
| ATGGATGTAAAGAAAAGCAA+TGG | + | chr3_2:81486005-81486024 | Msa0429910:intron | 30.0% | |
| ACTTGTCTGGATTTGATAAA+TGG | + | chr3_2:81486169-81486188 | Msa0429910:intron | 30.0% | |
| ! | TTCTCGGAAAATTGTTTCTT+GGG | - | chr3_2:81486316-81486335 | None:intergenic | 30.0% |
| AAATGTGAAAAATGCAAAGG+GGG | - | chr3_2:81486382-81486401 | None:intergenic | 30.0% | |
| GAAATGTGAAAAATGCAAAG+GGG | - | chr3_2:81486383-81486402 | None:intergenic | 30.0% | |
| CATACAAACAAAGGACAATT+TGG | - | chr3_2:81486458-81486477 | None:intergenic | 30.0% | |
| GCATCTAGTAATTTGAAAAG+GGG | + | chr3_2:81486558-81486577 | Msa0429910:intron | 30.0% | |
| CATCTAGTAATTTGAAAAGG+GGG | + | chr3_2:81486559-81486578 | Msa0429910:intron | 30.0% | |
| ! | TATTGTAGATGGTCTTAATG+GGG | - | chr3_2:81486749-81486768 | None:intergenic | 30.0% |
| ! | CTATTGTAGATGGTCTTAAT+GGG | - | chr3_2:81486750-81486769 | None:intergenic | 30.0% |
| ! | TCTATTGTAGATGGTCTTAA+TGG | - | chr3_2:81486751-81486770 | None:intergenic | 30.0% |
| TCCAATTTAGATGCTTAAGT+GGG | + | chr3_2:81486775-81486794 | Msa0429910:intron | 30.0% | |
| !!! | GTAAATTTTGTTTTAGGTGC+TGG | - | chr3_2:81486872-81486891 | None:intergenic | 30.0% |
| !! | CTCTCTCTCTTTAATTTTTG+TGG | - | chr3_2:81486975-81486994 | None:intergenic | 30.0% |
| CACAAAAATTAAAGAGAGAG+AGG | + | chr3_2:81486973-81486992 | Msa0429910:intron | 30.0% | |
| ! | AAACATTTTCTCTCCACAAT+GGG | + | chr3_2:81487029-81487048 | Msa0429910:intron | 30.0% |
| TGACACTCTTGCTAAATTAT+GGG | - | chr3_2:81487190-81487209 | None:intergenic | 30.0% | |
| TTGACACTCTTGCTAAATTA+TGG | - | chr3_2:81487191-81487210 | None:intergenic | 30.0% | |
| ! | CTTTTCTCTTAGACTATGTT+TGG | + | chr3_2:81487382-81487401 | Msa0429910:intron | 30.0% |
| TGTTTGGATTGACATTAAAG+TGG | + | chr3_2:81487398-81487417 | Msa0429910:intron | 30.0% | |
| ATGAATGAAATAGAGTGTGA+TGG | + | chr3_2:81487480-81487499 | Msa0429910:intron | 30.0% | |
| AATTGAGGGGAATTGAAAAT+TGG | - | chr3_2:81487536-81487555 | None:intergenic | 30.0% | |
| ! | TTTTCAATTCCCCTCAATTT+TGG | + | chr3_2:81487537-81487556 | Msa0429910:intron | 30.0% |
| ! | TTTCAATTCCCCTCAATTTT+GGG | + | chr3_2:81487538-81487557 | Msa0429910:intron | 30.0% |
| TAAGAACATCTCCTTCTATA+TGG | + | chr3_2:81487843-81487862 | Msa0429910:intron | 30.0% | |
| AAGAACATCTCCTTCTATAT+GGG | + | chr3_2:81487844-81487863 | Msa0429910:intron | 30.0% | |
| ACGATGCATTGTAATATGTA+GGG | - | chr3_2:81488154-81488173 | None:intergenic | 30.0% | |
| !! | TTTTGAGGACTAAAAGTTGA+AGG | - | chr3_2:81488385-81488404 | None:intergenic | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | chr3_2:81488727-81488746 | Msa0429910:intron | 30.0% | |
| GAGAAATATCCAATTGTTGT+AGG | + | chr3_2:81489042-81489061 | Msa0429910:intron | 30.0% | |
| !! | TTTTGTTATGCGAGCTAAAT+GGG | - | chr3_2:81489133-81489152 | None:intergenic | 30.0% |
| !! | TTTTTGTTATGCGAGCTAAA+TGG | - | chr3_2:81489134-81489153 | None:intergenic | 30.0% |
| TATTTATGGTTGATCCTAAC+GGG | - | chr3_2:81489680-81489699 | None:intergenic | 30.0% | |
| CTATTTATGGTTGATCCTAA+CGG | - | chr3_2:81489681-81489700 | None:intergenic | 30.0% | |
| AGGATCAACCATAAATAGAT+TGG | + | chr3_2:81489683-81489702 | Msa0429910:intron | 30.0% | |
| TGGAATGTCCAATCTATTTA+TGG | - | chr3_2:81489694-81489713 | None:intergenic | 30.0% | |
| AAATTCCTTGCACTTTGATA+TGG | + | chr3_2:81489869-81489888 | Msa0429910:intron | 30.0% | |
| ATTAAATGGTTCAAATGCAG+GGG | - | chr3_2:81489898-81489917 | None:intergenic | 30.0% | |
| CATTAAATGGTTCAAATGCA+GGG | - | chr3_2:81489899-81489918 | None:intergenic | 30.0% | |
| ACATTAAATGGTTCAAATGC+AGG | - | chr3_2:81489900-81489919 | None:intergenic | 30.0% | |
| CAAAAGCCATCAACATTAAA+TGG | - | chr3_2:81489912-81489931 | None:intergenic | 30.0% | |
| GTATTACAAGGTAAACCAAA+AGG | - | chr3_2:81490146-81490165 | None:intergenic | 30.0% | |
| !!! | AACTTGGTTTTGGTATTACA+AGG | - | chr3_2:81490158-81490177 | None:intergenic | 30.0% |
| TCAGAGTTACTTCATAAACT+TGG | - | chr3_2:81490174-81490193 | None:intergenic | 30.0% | |
| ATTTATGAAAGCAAGCTAGT+AGG | - | chr3_2:81490382-81490401 | None:intergenic | 30.0% | |
| ! | AACCTTCAGCTTTAATTCTT+TGG | + | chr3_2:81490434-81490453 | Msa0429910:intron | 30.0% |
| TTGGTTGTATATGTTAGGTT+AGG | - | chr3_2:81490475-81490494 | None:intergenic | 30.0% | |
| GAAGTTTGGTTGTATATGTT+AGG | - | chr3_2:81490480-81490499 | None:intergenic | 30.0% | |
| GATTACTTTGATGTGATTAC+AGG | + | chr3_2:81490703-81490722 | Msa0429910:CDS | 30.0% | |
| ! | GGATATCAAACCATTTTACT+TGG | + | chr3_2:81490801-81490820 | Msa0429910:CDS | 30.0% |
| TTAGTAGGACCAAAATATGA+TGG | + | chr3_2:81490972-81490991 | Msa0429910:CDS | 30.0% | |
| TAGTAGGACCAAAATATGAT+GGG | + | chr3_2:81490973-81490992 | Msa0429910:CDS | 30.0% | |
| ! | AGGTATTTCCCATCATATTT+TGG | - | chr3_2:81490984-81491003 | None:intergenic | 30.0% |
| CATGAATTCAACCTTATTGA+CGG | + | chr3_2:81491239-81491258 | Msa0429910:CDS | 30.0% | |
| GATGATATTTCAGACTTTAG+TGG | + | chr3_2:81491377-81491396 | Msa0429910:intron | 30.0% | |
| ATTATATTCCATAGGCTTGA+TGG | - | chr3_2:81491454-81491473 | None:intergenic | 30.0% | |
| AAGAAGCGATTATATTCCAT+AGG | - | chr3_2:81491462-81491481 | None:intergenic | 30.0% | |
| ! | TGACTAAACATGTCGATTAA+GGG | - | chr3_2:81491591-81491610 | None:intergenic | 30.0% |
| ! | TTGACTAAACATGTCGATTA+AGG | - | chr3_2:81491592-81491611 | None:intergenic | 30.0% |
| TAGTAGTGTTTACATATGTG+GGG | - | chr3_2:81491712-81491731 | None:intergenic | 30.0% | |
| TCAACAATTTGTCACCAATT+TGG | - | chr3_2:81491848-81491867 | None:intergenic | 30.0% | |
| ! | TCTAAGGTCAATTTAGAGAA+TGG | + | chr3_2:81491879-81491898 | Msa0429910:CDS | 30.0% |
| ATGTTTGAGCCAATTGAAAA+TGG | + | chr3_2:81491903-81491922 | Msa0429910:CDS | 30.0% | |
| TGTTTGAGCCAATTGAAAAT+GGG | + | chr3_2:81491904-81491923 | Msa0429910:CDS | 30.0% | |
| ! | TTAAAGCATTATTGGTGTGA+GGG | - | chr3_2:81492087-81492106 | None:intergenic | 30.0% |
| ! | ATTAAAGCATTATTGGTGTG+AGG | - | chr3_2:81492088-81492107 | None:intergenic | 30.0% |
| ATTCAAAACTGGCAGCAAAA+TGG | + | chr3_2:81485240-81485259 | Msa0429910:CDS | 35.0% | |
| TTCAAAACTGGCAGCAAAAT+GGG | + | chr3_2:81485241-81485260 | Msa0429910:CDS | 35.0% | |
| GATATCTTTAGTCAATCCTC+TGG | + | chr3_2:81485308-81485327 | Msa0429910:CDS | 35.0% | |
| ATCAACTGAAGAATCTGTAC+CGG | - | chr3_2:81485510-81485529 | None:intergenic | 35.0% | |
| GTTTGAGCCTATTGAAAATG+GGG | + | chr3_2:81485622-81485641 | Msa0429910:CDS | 35.0% | |
| !! | TATACCTTTTGAGAGCTTCT+TGG | - | chr3_2:81485655-81485674 | None:intergenic | 35.0% |
| GTGGATTTGTGTCTATATCA+AGG | - | chr3_2:81485867-81485886 | None:intergenic | 35.0% | |
| AGTATTCATGAACAACGAGT+GGG | - | chr3_2:81485889-81485908 | None:intergenic | 35.0% | |
| ! | TAAGTCCCAAAACTAGCTTA+AGG | - | chr3_2:81485928-81485947 | None:intergenic | 35.0% |
| ! | GTTCTCGGAAAATTGTTTCT+TGG | - | chr3_2:81486317-81486336 | None:intergenic | 35.0% |
| AATGTGAAAAATGCAAAGGG+GGG | - | chr3_2:81486381-81486400 | None:intergenic | 35.0% | |
| TTGAAAAGGGGGTTACATTT+AGG | + | chr3_2:81486570-81486589 | Msa0429910:intron | 35.0% | |
| TGAAAAGGGGGTTACATTTA+GGG | + | chr3_2:81486571-81486590 | Msa0429910:intron | 35.0% | |
| TCAAATGGGTGGTTACATTA+AGG | + | chr3_2:81486606-81486625 | Msa0429910:intron | 35.0% | |
| CAAATGGGTGGTTACATTAA+GGG | + | chr3_2:81486607-81486626 | Msa0429910:intron | 35.0% | |
| TGGGTAGTTGACAAATAAGT+TGG | - | chr3_2:81486655-81486674 | None:intergenic | 35.0% | |
| CTCCAATTTAGATGCTTAAG+TGG | + | chr3_2:81486774-81486793 | Msa0429910:intron | 35.0% | |
| ATAGATGATGTGTACATGCA+TGG | - | chr3_2:81486801-81486820 | None:intergenic | 35.0% | |
| !! | TGTTTGGTGCTTATAGAGAA+GGG | - | chr3_2:81487014-81487033 | None:intergenic | 35.0% |
| !! | ATGTTTGGTGCTTATAGAGA+AGG | - | chr3_2:81487015-81487034 | None:intergenic | 35.0% |
| CATTGTGGAGAGAAAATGTT+TGG | - | chr3_2:81487030-81487049 | None:intergenic | 35.0% | |
| ! | CAAACATTTTCTCTCCACAA+TGG | + | chr3_2:81487028-81487047 | Msa0429910:intron | 35.0% |
| ! | AACATTTTCTCTCCACAATG+GGG | + | chr3_2:81487030-81487049 | Msa0429910:intron | 35.0% |
| AATAAATAAGCACCCCATTG+TGG | - | chr3_2:81487045-81487064 | None:intergenic | 35.0% | |
| ! | AATGGGGTGCTTATTTATTC+TGG | + | chr3_2:81487046-81487065 | Msa0429910:intron | 35.0% |
| ! | TTTAGAGCATGAACAATGGT+GGG | - | chr3_2:81487090-81487109 | None:intergenic | 35.0% |
| ! | ATTTAGAGCATGAACAATGG+TGG | - | chr3_2:81487091-81487110 | None:intergenic | 35.0% |
| ! | ACCATTGTTCATGCTCTAAA+TGG | + | chr3_2:81487090-81487109 | Msa0429910:intron | 35.0% |
| !!! | ACTTGTTGTGACGTTTTCAT+AGG | - | chr3_2:81487149-81487168 | None:intergenic | 35.0% |
| TTGGATTGACATTAAAGTGG+TGG | + | chr3_2:81487401-81487420 | Msa0429910:intron | 35.0% | |
| ! | TTCAATTCCCCTCAATTTTG+GGG | + | chr3_2:81487539-81487558 | Msa0429910:intron | 35.0% |
| TCCATAAACCCCAAAATTGA+GGG | - | chr3_2:81487550-81487569 | None:intergenic | 35.0% | |
| TTCCATAAACCCCAAAATTG+AGG | - | chr3_2:81487551-81487570 | None:intergenic | 35.0% | |
| AAAGTTTGAACCCTGATCAA+GGG | - | chr3_2:81487992-81488011 | None:intergenic | 35.0% | |
| AAAAGTTTGAACCCTGATCA+AGG | - | chr3_2:81487993-81488012 | None:intergenic | 35.0% | |
| CGATGCATTGTAATATGTAG+GGG | - | chr3_2:81488153-81488172 | None:intergenic | 35.0% | |
| GACGATGCATTGTAATATGT+AGG | - | chr3_2:81488155-81488174 | None:intergenic | 35.0% | |
| CTTTGTGAACGTAACTCAAT+TGG | - | chr3_2:81488182-81488201 | None:intergenic | 35.0% | |
| ! | TTGCTCCCTCTAATTTTTCT+AGG | + | chr3_2:81488296-81488315 | Msa0429910:intron | 35.0% |
| ! | TGCTCCCTCTAATTTTTCTA+GGG | + | chr3_2:81488297-81488316 | Msa0429910:intron | 35.0% |
| GAGGGACTAAAATGAAAAGT+TGG | - | chr3_2:81488759-81488778 | None:intergenic | 35.0% | |
| AAAATAGGGACCAAAAGTAG+TGG | + | chr3_2:81488695-81488714 | Msa0429910:intron | 35.0% | |
| TATTGTGTTATGCTCCATTG+AGG | - | chr3_2:81488972-81488991 | None:intergenic | 35.0% | |
| TCTTTAGGCCATATATCTCA+AGG | - | chr3_2:81489024-81489043 | None:intergenic | 35.0% | |
| CTAAAAGACCCTACAACAAT+TGG | - | chr3_2:81489054-81489073 | None:intergenic | 35.0% | |
| TCTAAAAATCAACTCGATCC+CGG | - | chr3_2:81489609-81489628 | None:intergenic | 35.0% | |
| !! | TAACGGGCTTTGAACTTTAA+CGG | - | chr3_2:81489664-81489683 | None:intergenic | 35.0% |
| TTAAATGGTTCAAATGCAGG+GGG | - | chr3_2:81489897-81489916 | None:intergenic | 35.0% | |
| ATATTATGTCGTCTCTGCTA+TGG | - | chr3_2:81490210-81490229 | None:intergenic | 35.0% | |
| TTTAGATAGCATTGCATACG+AGG | - | chr3_2:81490308-81490327 | None:intergenic | 35.0% | |
| TGCCAAAGAATTAAAGCTGA+AGG | - | chr3_2:81490439-81490458 | None:intergenic | 35.0% | |
| TGATTGTGTTCTGTCCATTA+TGG | - | chr3_2:81490530-81490549 | None:intergenic | 35.0% | |
| TATAGTCACCAAGTTTCCAT+AGG | - | chr3_2:81490578-81490597 | None:intergenic | 35.0% | |
| !! | GTGACTATACTAAGTATCGA+TGG | + | chr3_2:81490589-81490608 | Msa0429910:CDS | 35.0% |
| !! | ACTATACTAAGTATCGATGG+TGG | + | chr3_2:81490592-81490611 | Msa0429910:CDS | 35.0% |
| ATTCTTGAAGTTGCGATTCA+AGG | - | chr3_2:81490657-81490676 | None:intergenic | 35.0% | |
| TCGCAACTTCAAGAATTAGA+CGG | + | chr3_2:81490661-81490680 | Msa0429910:CDS | 35.0% | |
| !! | AGTGGACGCTTTTTATCATT+CGG | - | chr3_2:81490769-81490788 | None:intergenic | 35.0% |
| ATATCCTTAGCAGCAAAAAG+TGG | - | chr3_2:81490787-81490806 | None:intergenic | 35.0% | |
| GATATACGTACTTGTGTTGT+GGG | - | chr3_2:81490846-81490865 | None:intergenic | 35.0% | |
| AGATATACGTACTTGTGTTG+TGG | - | chr3_2:81490847-81490866 | None:intergenic | 35.0% | |
| AATACCTTCATGAAGTGGTA+AGG | + | chr3_2:81490997-81491016 | Msa0429910:CDS | 35.0% | |
| ATACCTTCATGAAGTGGTAA+GGG | + | chr3_2:81490998-81491017 | Msa0429910:CDS | 35.0% | |
| AAATGTGGGAATCACAATGT+TGG | - | chr3_2:81491060-81491079 | None:intergenic | 35.0% | |
| TTCAAGAACCAAGATACAGA+AGG | + | chr3_2:81491209-81491228 | Msa0429910:CDS | 35.0% | |
| TAGTCAATCATCAGCTGATA+TGG | + | chr3_2:81491605-81491624 | Msa0429910:CDS | 35.0% | |
| ACATAATTACCTACGGATAC+AGG | + | chr3_2:81491671-81491690 | Msa0429910:intron | 35.0% | |
| ATAATTGTACCTGTATCCGT+AGG | - | chr3_2:81491683-81491702 | None:intergenic | 35.0% | |
| AATGCAGGATGATACATTGA+CGG | + | chr3_2:81485487-81485506 | Msa0429910:intron | 35.0% | |
| TCTAAATTGACCTTAGAGAC+TGG | - | chr3_2:81491876-81491895 | None:intergenic | 35.0% | |
| GTTTGAGCCAATTGAAAATG+GGG | + | chr3_2:81491905-81491924 | Msa0429910:CDS | 35.0% | |
| ! | TTAGTCTCCCCATTTTCAAT+TGG | - | chr3_2:81491915-81491934 | None:intergenic | 35.0% |
| !! | TTTACCTTTTGAGAGCTTCT+TGG | - | chr3_2:81491938-81491957 | None:intergenic | 35.0% |
| !!! | CCTCTCTTGAGAAAGTATTT+TGG | - | chr3_2:81492044-81492063 | None:intergenic | 35.0% |
| CCAAAATACTTTCTCAAGAG+AGG | + | chr3_2:81492041-81492060 | Msa0429910:CDS | 35.0% | |
| AAATACTTTCTCAAGAGAGG+AGG | + | chr3_2:81492044-81492063 | Msa0429910:CDS | 35.0% | |
| ! | TAAAGCATTATTGGTGTGAG+GGG | - | chr3_2:81492086-81492105 | None:intergenic | 35.0% |
| CTAAGAATTTGCAAGCAATG+AGG | - | chr3_2:81492125-81492144 | None:intergenic | 35.0% | |
| CTAATAATCTCATTGGGCAC+TGG | + | chr3_2:81485191-81485210 | Msa0429910:CDS | 40.0% | |
| TCAAAACTGGCAGCAAAATG+GGG | + | chr3_2:81485242-81485261 | Msa0429910:CDS | 40.0% | |
| ! | CAAAATGGGGTCTTTTGGAT+TGG | + | chr3_2:81485255-81485274 | Msa0429910:CDS | 40.0% |
| !!! | CTTTTGGATTGGTTAACCCA+CGG | + | chr3_2:81485266-81485285 | Msa0429910:CDS | 40.0% |
| ! | TAGTCAATCCTCTGGAGATA+TGG | + | chr3_2:81485316-81485335 | Msa0429910:CDS | 40.0% |
| GAAATCAACCATATCTCCAG+AGG | - | chr3_2:81485327-81485346 | None:intergenic | 40.0% | |
| CTTGAGTAACAGTAGCAAGA+TGG | - | chr3_2:81485349-81485368 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+CGG | + | chr3_2:81485488-81485507 | Msa0429910:intron | 40.0% | |
| ! | TTGGTCTCCCCATTTTCAAT+AGG | - | chr3_2:81485632-81485651 | None:intergenic | 40.0% |
| !! | TCAAGGTCTTGTTAGTGTGA+GGG | - | chr3_2:81485850-81485869 | None:intergenic | 40.0% |
| !! | ATCAAGGTCTTGTTAGTGTG+AGG | - | chr3_2:81485851-81485870 | None:intergenic | 40.0% |
| GAGTATTCATGAACAACGAG+TGG | - | chr3_2:81485890-81485909 | None:intergenic | 40.0% | |
| ATCAAATCCAGACAAGTAGC+TGG | - | chr3_2:81486166-81486185 | None:intergenic | 40.0% | |
| TTGTAAGGTCGTGATGTTCT+CGG | - | chr3_2:81486332-81486351 | None:intergenic | 40.0% | |
| TATGTGGAACCGTCATATCT+AGG | - | chr3_2:81486698-81486717 | None:intergenic | 40.0% | |
| ! | TTGGAGTGCTCTATTGTAGA+TGG | - | chr3_2:81486760-81486779 | None:intergenic | 40.0% |
| GCCCACTTAAGCATCTAAAT+TGG | - | chr3_2:81486779-81486798 | None:intergenic | 40.0% | |
| !!! | TTTTGTTTTAGGTGCTGGGT+TGG | - | chr3_2:81486867-81486886 | None:intergenic | 40.0% |
| ! | GCCATTTAGAGCATGAACAA+TGG | - | chr3_2:81487094-81487113 | None:intergenic | 40.0% |
| ACGTGAGAGAAAAACTTGTG+AGG | - | chr3_2:81487354-81487373 | None:intergenic | 40.0% | |
| CCATAAACCCCAAAATTGAG+GGG | - | chr3_2:81487549-81487568 | None:intergenic | 40.0% | |
| GCTCTTGTAACCCATATAGA+AGG | - | chr3_2:81487857-81487876 | None:intergenic | 40.0% | |
| TTGCGTAGAACCATAGATCA+AGG | + | chr3_2:81487957-81487976 | Msa0429910:intron | 40.0% | |
| AGAACCATAGATCAAGGTTG+CGG | + | chr3_2:81487963-81487982 | Msa0429910:intron | 40.0% | |
| ! | TTTTTCCTCAGGTAGTCTAG+TGG | + | chr3_2:81488069-81488088 | Msa0429910:intron | 40.0% |
| TGTGAACGTAACTCAATTGG+TGG | - | chr3_2:81488179-81488198 | None:intergenic | 40.0% | |
| !!! | AGTTGCTTTTTGTGCCTCAA+TGG | + | chr3_2:81488955-81488974 | Msa0429910:intron | 40.0% |
| TAGGGAGTCCTTGAGATATA+TGG | + | chr3_2:81489013-81489032 | Msa0429910:intron | 40.0% | |
| !! | AAATGGGTTCCACGCTTTTT+AGG | - | chr3_2:81489083-81489102 | None:intergenic | 40.0% |
| ! | TAAAAAGCGTGGAACCCATT+TGG | + | chr3_2:81489082-81489101 | Msa0429910:intron | 40.0% |
| ! | AAAAAGCGTGGAACCCATTT+GGG | + | chr3_2:81489083-81489102 | Msa0429910:intron | 40.0% |
| TCGTACAGGTTATCCCAAAT+GGG | - | chr3_2:81489099-81489118 | None:intergenic | 40.0% | |
| GTTAAAGTTCAAAGCCCGTT+AGG | + | chr3_2:81489663-81489682 | Msa0429910:intron | 40.0% | |
| AGTAACTCTGAACCAGTCAT+TGG | + | chr3_2:81490183-81490202 | Msa0429910:intron | 40.0% | |
| ATTGCATACGAGGAAGAGTA+TGG | - | chr3_2:81490298-81490317 | None:intergenic | 40.0% | |
| !! | TGTTAGGTTAGGTTGATCTC+AGG | - | chr3_2:81490464-81490483 | None:intergenic | 40.0% |
| !! | ATACTAAGTATCGATGGTGG+CGG | + | chr3_2:81490595-81490614 | Msa0429910:CDS | 40.0% |
| AATTAGACGGTGAATCTGCT+AGG | + | chr3_2:81490674-81490693 | Msa0429910:CDS | 40.0% | |
| GTGATTACAGGAACAAGTAC+AGG | + | chr3_2:81490715-81490734 | Msa0429910:intron | 40.0% | |
| ATTACAGGAACAAGTACAGG+TGG | + | chr3_2:81490718-81490737 | Msa0429910:intron | 40.0% | |
| !! | GGAGAGTGTTCCAAGTAAAA+TGG | - | chr3_2:81490814-81490833 | None:intergenic | 40.0% |
| TTGTGTTGTGGGAAGATCTT+AGG | - | chr3_2:81490835-81490854 | None:intergenic | 40.0% | |
| ! | AAATCATGCAGGGACTTGTT+GGG | + | chr3_2:81490924-81490943 | Msa0429910:intron | 40.0% |
| TGGGAAATACCTTCATGAAG+TGG | + | chr3_2:81490992-81491011 | Msa0429910:CDS | 40.0% | |
| TTGTAGCCTGGAAGATATGT+AGG | - | chr3_2:81491188-81491207 | None:intergenic | 40.0% | |
| TGGTTCTTGAAATTGTAGCC+TGG | - | chr3_2:81491200-81491219 | None:intergenic | 40.0% | |
| GAATTCAACCTTATTGACGG+CGG | + | chr3_2:81491242-81491261 | Msa0429910:CDS | 40.0% | |
| ! | TCGCTTCTTGATAATCTCAC+TGG | + | chr3_2:81491473-81491492 | Msa0429910:CDS | 40.0% |
| ! | CGCTTCTTGATAATCTCACT+GGG | + | chr3_2:81491474-81491493 | Msa0429910:CDS | 40.0% |
| ! | TTGATAATCTCACTGGGAAC+TGG | + | chr3_2:81491480-81491499 | Msa0429910:CDS | 40.0% |
| TGATAATCTCACTGGGAACT+GGG | + | chr3_2:81491481-81491500 | Msa0429910:CDS | 40.0% | |
| ATGCGAAAATGGCAGCAAAA+TGG | + | chr3_2:81491529-81491548 | Msa0429910:CDS | 40.0% | |
| TGCGAAAATGGCAGCAAAAT+GGG | + | chr3_2:81491530-81491549 | Msa0429910:CDS | 40.0% | |
| TGAATTAAGTGCTCGAGTGA+CGG | - | chr3_2:81491649-81491668 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+GGG | + | chr3_2:81485488-81485507 | Msa0429910:intron | 40.0% | |
| GTTGAAGAAACCAGTCTCTA+AGG | + | chr3_2:81491863-81491882 | Msa0429910:CDS | 40.0% | |
| CTAACCAAGAAGCTCTCAAA+AGG | + | chr3_2:81491931-81491950 | Msa0429910:CDS | 40.0% | |
| !! | CCTTTTGAGAGCTTCTTGGT+TGG | - | chr3_2:81485651-81485670 | None:intergenic | 45.0% |
| CCAACCAAGAAGCTCTCAAA+AGG | + | chr3_2:81485648-81485667 | Msa0429910:CDS | 45.0% | |
| !! | CAAGGTCTTGTTAGTGTGAG+GGG | - | chr3_2:81485849-81485868 | None:intergenic | 45.0% |
| ATTCATGAACAACGAGTGGG+TGG | - | chr3_2:81485886-81485905 | None:intergenic | 45.0% | |
| CTCTAAACCAGCTACTTGTC+TGG | + | chr3_2:81486156-81486175 | Msa0429910:intron | 45.0% | |
| GGGTTACATTAAGAGACGGA+GGG | - | chr3_2:81486361-81486380 | None:intergenic | 45.0% | |
| AGGGGGGTTACATTAAGAGA+CGG | - | chr3_2:81486365-81486384 | None:intergenic | 45.0% | |
| TGGGTGGTTACATTAAGGGA+CGG | + | chr3_2:81486611-81486630 | Msa0429910:intron | 45.0% | |
| TGGTTACATTAAGGGACGGA+GGG | + | chr3_2:81486615-81486634 | Msa0429910:intron | 45.0% | |
| ! | TTGGTGCTTATAGAGAAGGG+TGG | - | chr3_2:81487011-81487030 | None:intergenic | 45.0% |
| !!! | CCCCTCAATTTTGGGGTTTA+TGG | + | chr3_2:81487546-81487565 | Msa0429910:intron | 45.0% |
| GATCTGGCCTCACAATATCA+CGG | + | chr3_2:81487669-81487688 | Msa0429910:intron | 45.0% | |
| TTTGCCTCCGTGATATTGTG+AGG | - | chr3_2:81487679-81487698 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | + | chr3_2:81487891-81487910 | Msa0429910:intron | 45.0% | |
| !!! | AGCACGTTGCGCTCTTTTTT+TGG | + | chr3_2:81487921-81487940 | Msa0429910:intron | 45.0% |
| GTTTCCGCAACCTTGATCTA+TGG | - | chr3_2:81487970-81487989 | None:intergenic | 45.0% | |
| AGAGGGACCAAAAGCAAAGA+TGG | - | chr3_2:81488414-81488433 | None:intergenic | 45.0% | |
| !!! | GTTCCACGCTTTTTAGGACT+GGG | - | chr3_2:81489077-81489096 | None:intergenic | 45.0% |
| CTCGTACAGGTTATCCCAAA+TGG | - | chr3_2:81489100-81489119 | None:intergenic | 45.0% | |
| ! | ATACGAGGAAGAGTATGGCA+TGG | - | chr3_2:81490293-81490312 | None:intergenic | 45.0% |
| TAGGATGTAGCTGGTGTGTT+TGG | - | chr3_2:81490363-81490382 | None:intergenic | 45.0% | |
| GTCACCAAGTTTCCATAGGT+GGG | - | chr3_2:81490574-81490593 | None:intergenic | 45.0% | |
| AGTCACCAAGTTTCCATAGG+TGG | - | chr3_2:81490575-81490594 | None:intergenic | 45.0% | |
| GAAATCATGCAGGGACTTGT+TGG | + | chr3_2:81490923-81490942 | Msa0429910:intron | 45.0% | |
| TCTCCCTTACCACTTCATGA+AGG | - | chr3_2:81491004-81491023 | None:intergenic | 45.0% | |
| TGAAGTGGTAAGGGAGAAGT+TGG | + | chr3_2:81491007-81491026 | Msa0429910:CDS | 45.0% | |
| GAAGTGGTAAGGGAGAAGTT+GGG | + | chr3_2:81491008-81491027 | Msa0429910:CDS | 45.0% | |
| AAGTGGTAAGGGAGAAGTTG+GGG | + | chr3_2:81491009-81491028 | Msa0429910:CDS | 45.0% | |
| GATCAAGAAAACCCCTTGCA+TGG | + | chr3_2:81491121-81491140 | Msa0429910:intron | 45.0% | |
| AAGATATGTAGGTGCAGCAG+AGG | - | chr3_2:81491177-81491196 | None:intergenic | 45.0% | |
| GTGTGTTGCCTTCTGTATCT+TGG | - | chr3_2:81491220-81491239 | None:intergenic | 45.0% | |
| CGGTGTTTGTGCAAATAACC+CGG | + | chr3_2:81491262-81491281 | Msa0429910:CDS | 45.0% | |
| CTTCTATGCCATCAAGCCTA+TGG | + | chr3_2:81491443-81491462 | Msa0429910:CDS | 45.0% | |
| GCGAAAATGGCAGCAAAATG+GGG | + | chr3_2:81491531-81491550 | Msa0429910:CDS | 45.0% | |
| !! | CTGCTGGATTGGTTAACTCA+CGG | + | chr3_2:81491555-81491574 | Msa0429910:CDS | 45.0% |
| TGTGAGGGGATTTCAACTCT+CGG | - | chr3_2:81492072-81492091 | None:intergenic | 45.0% | |
| !! | TTTATTAATAATGAATTAAT+AGG | - | chr3_2:81486058-81486077 | None:intergenic | 5.0% |
| !!! | TATATTTTTTTTTGTAATTT+TGG | - | chr3_2:81487770-81487789 | None:intergenic | 5.0% |
| !!! | TTAAAAAAATCTATTTTTTT+TGG | + | chr3_2:81488607-81488626 | Msa0429910:intron | 5.0% |
| ! | GGCAGCAAAATGGGGTCTTT+TGG | + | chr3_2:81485250-81485269 | Msa0429910:CDS | 50.0% |
| !! | TTGGATTGGTTAACCCACGG+TGG | + | chr3_2:81485269-81485288 | Msa0429910:CDS | 50.0% |
| TAAGGGAGTTGAACCACCGT+GGG | - | chr3_2:81485285-81485304 | None:intergenic | 50.0% | |
| TTAAGGGAGTTGAACCACCG+TGG | - | chr3_2:81485286-81485305 | None:intergenic | 50.0% | |
| ! | GACGGAGGGAGTAGTTTGTA+AGG | - | chr3_2:81486347-81486366 | None:intergenic | 50.0% |
| GGGGTTACATTAAGAGACGG+AGG | - | chr3_2:81486362-81486381 | None:intergenic | 50.0% | |
| GTGGTTACATTAAGGGACGG+AGG | + | chr3_2:81486614-81486633 | Msa0429910:intron | 50.0% | |
| CTGAAACAGCGGAGTAAAGG+GGG | - | chr3_2:81487644-81487663 | None:intergenic | 50.0% | |
| CCTGAAACAGCGGAGTAAAG+GGG | - | chr3_2:81487645-81487664 | None:intergenic | 50.0% | |
| CCCTGAAACAGCGGAGTAAA+GGG | - | chr3_2:81487646-81487665 | None:intergenic | 50.0% | |
| ! | CCCTTTACTCCGCTGTTTCA+GGG | + | chr3_2:81487643-81487662 | Msa0429910:intron | 50.0% |
| ! | CCTTTACTCCGCTGTTTCAG+GGG | + | chr3_2:81487644-81487663 | Msa0429910:intron | 50.0% |
| ATGATACCCGTGCATACGGA+CGG | + | chr3_2:81487895-81487914 | Msa0429910:intron | 50.0% | |
| GTTGCGGAAACCCTTGATCA+GGG | + | chr3_2:81487979-81487998 | Msa0429910:intron | 50.0% | |
| GTAAATAACCGGAGAGTCCG+AGG | + | chr3_2:81488115-81488134 | Msa0429910:intron | 50.0% | |
| TAGCCCAGTCCTAAAAAGCG+TGG | + | chr3_2:81489071-81489090 | Msa0429910:intron | 50.0% | |
| !!! | GGTTCCACGCTTTTTAGGAC+TGG | - | chr3_2:81489078-81489097 | None:intergenic | 50.0% |
| TTTAGCCCACGACCCGTATA+AGG | + | chr3_2:81489583-81489602 | Msa0429910:intron | 50.0% | |
| ! | AACTCGATCCCGGCCTTATA+CGG | - | chr3_2:81489599-81489618 | None:intergenic | 50.0% |
| GGGCTCCATATCAAAGTGCA+AGG | - | chr3_2:81489877-81489896 | None:intergenic | 50.0% | |
| CTCTGCTATGGTCCAATGAC+TGG | - | chr3_2:81490198-81490217 | None:intergenic | 50.0% | |
| CGCGCATCTTTGACGAAAGT+TGG | + | chr3_2:81490245-81490264 | Msa0429910:intron | 50.0% | |
| GCAAGCTAGTAGGATGTAGC+TGG | - | chr3_2:81490372-81490391 | None:intergenic | 50.0% | |
| ACCAAGTTTCCATAGGTGGG+AGG | - | chr3_2:81490571-81490590 | None:intergenic | 50.0% | |
| !! | TATCGATGGTGGCGGCATTA+GGG | + | chr3_2:81490603-81490622 | Msa0429910:CDS | 50.0% |
| AGGAACTCGAGGATAGTTGC+AGG | - | chr3_2:81490637-81490656 | None:intergenic | 50.0% | |
| GTTGCGATTCAAGGAACTCG+AGG | - | chr3_2:81490648-81490667 | None:intergenic | 50.0% | |
| !!! | GCGTCCACTTTTTGCTGCTA+AGG | + | chr3_2:81490780-81490799 | Msa0429910:CDS | 50.0% |
| !! | AGGGACTTGTTGGGATCAGT+GGG | + | chr3_2:81490933-81490952 | Msa0429910:intron | 50.0% |
| AGTGGTAAGGGAGAAGTTGG+GGG | + | chr3_2:81491010-81491029 | Msa0429910:CDS | 50.0% | |
| AGAGTCGAGCATCCATGCAA+GGG | - | chr3_2:81491136-81491155 | None:intergenic | 50.0% | |
| GCTGCACCTACATATCTTCC+AGG | + | chr3_2:81491179-81491198 | Msa0429910:CDS | 50.0% | |
| CACAAACACCGCCGTCAATA+AGG | - | chr3_2:81491253-81491272 | None:intergenic | 50.0% | |
| CAAAATGGGGTCTGCTGGAT+TGG | + | chr3_2:81491544-81491563 | Msa0429910:CDS | 50.0% | |
| !! | CTGGATTGGTTAACTCACGG+TGG | + | chr3_2:81491558-81491577 | Msa0429910:CDS | 50.0% |
| ! | GGTGCTGGGTTGGAGAGATT+GGG | - | chr3_2:81486857-81486876 | None:intergenic | 55.0% |
| !! | AGGTGCTGGGTTGGAGAGAT+TGG | - | chr3_2:81486858-81486877 | None:intergenic | 55.0% |
| ! | CCCCTTTACTCCGCTGTTTC+AGG | + | chr3_2:81487642-81487661 | Msa0429910:intron | 55.0% |
| CCCCTGAAACAGCGGAGTAA+AGG | - | chr3_2:81487647-81487666 | None:intergenic | 55.0% | |
| CAGATCTGCCCCTGAAACAG+CGG | - | chr3_2:81487655-81487674 | None:intergenic | 55.0% | |
| CTGGCCTCACAATATCACGG+AGG | + | chr3_2:81487672-81487691 | Msa0429910:intron | 55.0% | |
| TGATACCCGTGCATACGGAC+GGG | + | chr3_2:81487896-81487915 | Msa0429910:intron | 55.0% | |
| GGTTGCGGAAACCCTTGATC+AGG | + | chr3_2:81487978-81487997 | Msa0429910:intron | 55.0% | |
| GCTAGCCACTAGACTACCTG+AGG | - | chr3_2:81488077-81488096 | None:intergenic | 55.0% | |
| TGTTCGAACCTCGGACTCTC+CGG | - | chr3_2:81488126-81488145 | None:intergenic | 55.0% | |
| AGGGGTCGATGTTCGAACCT+CGG | - | chr3_2:81488135-81488154 | None:intergenic | 55.0% | |
| GGGATAACCTGTACGAGCCA+CGG | + | chr3_2:81489103-81489122 | Msa0429910:intron | 55.0% | |
| GGATAACCTGTACGAGCCAC+GGG | + | chr3_2:81489104-81489123 | Msa0429910:intron | 55.0% | |
| ! | ACTCGATCCCGGCCTTATAC+GGG | - | chr3_2:81489598-81489617 | None:intergenic | 55.0% |
| CAGATTCAGCCTCCCACCTA+TGG | + | chr3_2:81490559-81490578 | Msa0429910:CDS | 55.0% | |
| GCCTCCCACCTATGGAAACT+TGG | + | chr3_2:81490567-81490586 | Msa0429910:CDS | 55.0% | |
| !! | GTATCGATGGTGGCGGCATT+AGG | + | chr3_2:81490602-81490621 | Msa0429910:CDS | 55.0% |
| !! | ATCGATGGTGGCGGCATTAG+GGG | + | chr3_2:81490604-81490623 | Msa0429910:CDS | 55.0% |
| !! | CAGGGACTTGTTGGGATCAG+TGG | + | chr3_2:81490932-81490951 | Msa0429910:intron | 55.0% |
| !! | GGGACTTGTTGGGATCAGTG+GGG | + | chr3_2:81490934-81490953 | Msa0429910:intron | 55.0% |
| GAGTCGAGCATCCATGCAAG+GGG | - | chr3_2:81491135-81491154 | None:intergenic | 55.0% | |
| GAGAGTCGAGCATCCATGCA+AGG | - | chr3_2:81491137-81491156 | None:intergenic | 55.0% | |
| ! | CGCTGTTTCAGGGGCAGATC+TGG | + | chr3_2:81487653-81487672 | Msa0429910:intron | 60.0% |
| TGCTCACCCGTCCGTATGCA+CGG | - | chr3_2:81487905-81487924 | None:intergenic | 60.0% | |
| !! | CGAGCTAAATGGGCTACCCG+TGG | - | chr3_2:81489123-81489142 | None:intergenic | 60.0% |
| GGCAGCAAAATGGGGTCTGC+TGG | + | chr3_2:81491539-81491558 | Msa0429910:CDS | 60.0% | |
| CTCGAGTGACGGCAGCAAGA+TGG | - | chr3_2:81491638-81491657 | None:intergenic | 60.0% | |
| GCTCACCCGTCCGTATGCAC+GGG | - | chr3_2:81487904-81487923 | None:intergenic | 65.0% | |
| GCCCACGACCCGTATAAGGC+CGG | + | chr3_2:81489587-81489606 | Msa0429910:intron | 65.0% | |
| ! | CCCGGCCTTATACGGGTCGT+GGG | - | chr3_2:81489591-81489610 | None:intergenic | 65.0% |
| CCCACGACCCGTATAAGGCC+GGG | + | chr3_2:81489588-81489607 | Msa0429910:intron | 65.0% | |
| ! | TCCCGGCCTTATACGGGTCG+TGG | - | chr3_2:81489592-81489611 | None:intergenic | 65.0% |
| GGGCTACCCGTGGCTCGTAC+AGG | - | chr3_2:81489113-81489132 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 81485173 | 81492149 | 81485173 | ID=Msa0429910;Name=Msa0429910 |
| chr3_2 | mRNA | 81485173 | 81492149 | 81485173 | ID=Msa0429910-mRNA-1;Parent=Msa0429910;Name=Msa0429910-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.12|0.11|1|0.5|0.44|9|38|498 |
| chr3_2 | exon | 81485173 | 81485403 | 81485173 | ID=Msa0429910-mRNA-1:exon:22533;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81485494 | 81485669 | 81485494 | ID=Msa0429910-mRNA-1:exon:22534;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81490540 | 81490730 | 81490540 | ID=Msa0429910-mRNA-1:exon:22535;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81490737 | 81490854 | 81490737 | ID=Msa0429910-mRNA-1:exon:22536;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81490935 | 81491064 | 81490935 | ID=Msa0429910-mRNA-1:exon:22537;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81491122 | 81491283 | 81491122 | ID=Msa0429910-mRNA-1:exon:22538;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81491390 | 81491626 | 81491390 | ID=Msa0429910-mRNA-1:exon:22539;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81491777 | 81491952 | 81491777 | ID=Msa0429910-mRNA-1:exon:22540;Parent=Msa0429910-mRNA-1 |
| chr3_2 | exon | 81492036 | 81492149 | 81492036 | ID=Msa0429910-mRNA-1:exon:22541;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81485173 | 81485403 | 81485173 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81485494 | 81485669 | 81485494 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81490540 | 81490730 | 81490540 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81490737 | 81490854 | 81490737 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81490935 | 81491064 | 81490935 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81491122 | 81491283 | 81491122 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81491390 | 81491626 | 81491390 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81491777 | 81491952 | 81491777 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | CDS | 81492036 | 81492111 | 81492036 | ID=Msa0429910-mRNA-1:cds;Parent=Msa0429910-mRNA-1 |
| chr3_2 | three_prime_UTR | 81492112 | 81492149 | 81492112 | ID=Msa0429910-mRNA-1:three_prime_utr;Parent=Msa0429910-mRNA-1 |
| Gene Sequence |
| Protein sequence |
