Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500770 | QCE16550.1 | 67.089 | 790 | 155 | 8 | 1 | 685 | 1 | 790 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500770 | sp|O48723|PLP2_ARATH | 55.725 | 393 | 130 | 4 | 332 | 681 | 10 | 401 | 2.98e-143 | 427 |
| Msa0500770 | sp|O48723|PLP2_ARATH | 53.763 | 372 | 111 | 4 | 11 | 322 | 10 | 380 | 1.03e-124 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500770 | A0A4D6NRM1 | 67.089 | 790 | 155 | 8 | 1 | 685 | 1 | 790 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa0500770 | 0.855411 | 6.425132e-62 | -8.615850e-47 |
| Msa0051480 | Msa0500770 | 0.848277 | 6.790560e-60 | -8.615850e-47 |
| Msa0051620 | Msa0500770 | 0.847190 | 1.353035e-59 | -8.615850e-47 |
| Msa0051730 | Msa0500770 | 0.850986 | 1.190346e-60 | -8.615850e-47 |
| Msa0086360 | Msa0500770 | 0.811570 | 6.553573e-51 | -8.615850e-47 |
| Msa0089890 | Msa0500770 | 0.817353 | 3.445548e-52 | -8.615850e-47 |
| Msa0136240 | Msa0500770 | 0.811472 | 6.881950e-51 | -8.615850e-47 |
| Msa0143640 | Msa0500770 | 0.835288 | 1.830800e-56 | -8.615850e-47 |
| Msa0146090 | Msa0500770 | 0.828432 | 9.021705e-55 | -8.615850e-47 |
| Msa0146200 | Msa0500770 | 0.852059 | 5.918200e-61 | -8.615850e-47 |
| Msa0161560 | Msa0500770 | 0.805469 | 1.315060e-49 | -8.615850e-47 |
| Msa0162680 | Msa0500770 | 0.843630 | 1.245174e-58 | -8.615850e-47 |
| Msa0164250 | Msa0500770 | 0.802294 | 6.005424e-49 | -8.615850e-47 |
| Msa0185100 | Msa0500770 | 0.811748 | 5.994853e-51 | -8.615850e-47 |
| Msa0202380 | Msa0500770 | 0.805415 | 1.349686e-49 | -8.615850e-47 |
| Msa0238710 | Msa0500770 | 0.804222 | 2.395586e-49 | -8.615850e-47 |
| Msa0385320 | Msa0500770 | 0.806193 | 9.264217e-50 | -8.615850e-47 |
| Msa0393100 | Msa0500770 | 0.826237 | 3.028686e-54 | -8.615850e-47 |
| Msa0402800 | Msa0500770 | 0.819722 | 1.000441e-52 | -8.615850e-47 |
| Msa0429900 | Msa0500770 | 0.914518 | 1.744733e-84 | -8.615850e-47 |
| Msa0429910 | Msa0500770 | 0.868855 | 4.786684e-66 | -8.615850e-47 |
| Msa0438070 | Msa0500770 | 0.846134 | 2.628044e-59 | -8.615850e-47 |
| Msa0472090 | Msa0500770 | 0.800114 | 1.677645e-48 | -8.615850e-47 |
| Msa0476770 | Msa0500770 | 0.802853 | 4.606807e-49 | -8.615850e-47 |
| Msa0480540 | Msa0500770 | 0.817213 | 3.706271e-52 | -8.615850e-47 |
| Msa0480550 | Msa0500770 | 0.836002 | 1.207928e-56 | -8.615850e-47 |
| Msa0481770 | Msa0500770 | 0.810077 | 1.379031e-50 | -8.615850e-47 |
| Msa0273070 | Msa0500770 | 0.803684 | 3.099746e-49 | -8.615850e-47 |
| Msa0302510 | Msa0500770 | 0.810076 | 1.379895e-50 | -8.615850e-47 |
| Msa0306310 | Msa0500770 | 0.841448 | 4.722887e-58 | -8.615850e-47 |
| Msa0319680 | Msa0500770 | 0.802079 | 6.651068e-49 | -8.615850e-47 |
| Msa0345980 | Msa0500770 | 0.818732 | 1.681502e-52 | -8.615850e-47 |
| Msa0488580 | Msa0500770 | 0.813146 | 2.967232e-51 | -8.615850e-47 |
| Msa0497860 | Msa0500770 | 0.814783 | 1.292196e-51 | -8.615850e-47 |
| Msa0500770 | Msa0500830 | 0.801039 | 1.086769e-48 | -8.615850e-47 |
| Msa0500770 | Msa0523080 | 0.807831 | 4.171759e-50 | -8.615850e-47 |
| Msa0500770 | Msa0568110 | 0.802217 | 6.228411e-49 | -8.615850e-47 |
| Msa0500770 | Msa0570460 | 0.818705 | 1.704860e-52 | -8.615850e-47 |
| Msa0500770 | Msa0580840 | 0.838411 | 2.921813e-57 | -8.615850e-47 |
| Msa0500770 | Msa0585060 | 0.828517 | 8.606139e-55 | -8.615850e-47 |
| Msa0500770 | Msa0652590 | 0.800224 | 1.593114e-48 | -8.615850e-47 |
| Msa0500770 | Msa0704560 | 0.830931 | 2.224487e-55 | -8.615850e-47 |
| Msa0500770 | Msa0740630 | 0.859081 | 5.294410e-63 | -8.615850e-47 |
| Msa0500770 | Msa0744550 | 0.814906 | 1.213765e-51 | -8.615850e-47 |
| Msa0500770 | Msa0744560 | 0.830901 | 2.261303e-55 | -8.615850e-47 |
| Msa0500770 | Msa0746340 | 0.867068 | 1.796351e-65 | -8.615850e-47 |
| Msa0500770 | Msa0758520 | 0.801967 | 7.012886e-49 | -8.615850e-47 |
| Msa0500770 | Msa0781210 | 0.814271 | 1.677091e-51 | -8.615850e-47 |
| Msa0500770 | Msa0795320 | 0.816264 | 6.049593e-52 | -8.615850e-47 |
| Msa0500770 | Msa0820880 | 0.863062 | 3.254581e-64 | -8.615850e-47 |
| Msa0500770 | Msa0826450 | 0.803150 | 3.999760e-49 | -8.615850e-47 |
| Msa0500770 | Msa0832950 | 0.810368 | 1.193538e-50 | -8.615850e-47 |
| Msa0500770 | Msa0848020 | 0.807472 | 4.971523e-50 | -8.615850e-47 |
| Msa0500770 | Msa0859040 | 0.841873 | 3.647939e-58 | -8.615850e-47 |
| Msa0500770 | Msa0865810 | 0.813041 | 3.128217e-51 | -8.615850e-47 |
| Msa0500770 | Msa0865820 | 0.810369 | 1.193010e-50 | -8.615850e-47 |
| Msa0500770 | Msa0865830 | 0.800376 | 1.483986e-48 | -8.615850e-47 |
| Msa0500770 | Msa1025750 | 0.814605 | 1.415092e-51 | -8.615850e-47 |
| Msa0500770 | Msa1027910 | 0.844711 | 6.384723e-59 | -8.615850e-47 |
| Msa0500770 | Msa1030210 | 0.832670 | 8.282445e-56 | -8.615850e-47 |
| Msa0500770 | Msa1064240 | 0.801239 | 9.891558e-49 | -8.615850e-47 |
| Msa0500770 | Msa1069250 | 0.839831 | 1.252551e-57 | -8.615850e-47 |
| Msa0500770 | Msa1084890 | 0.835868 | 1.305692e-56 | -8.615850e-47 |
| Msa0500770 | Msa1120580 | 0.829327 | 5.478383e-55 | -8.615850e-47 |
| Msa0500770 | Msa1157110 | 0.817050 | 4.032161e-52 | -8.615850e-47 |
| Msa0500770 | Msa1184400 | 0.843701 | 1.191583e-58 | -8.615850e-47 |
| Msa0500770 | Msa1211610 | 0.835471 | 1.646199e-56 | -8.615850e-47 |
| Msa0500770 | Msa1223560 | 0.814962 | 1.179473e-51 | -8.615850e-47 |
| Msa0500770 | Msa1224510 | 0.863381 | 2.593506e-64 | -8.615850e-47 |
| Msa0500770 | Msa1256600 | 0.813144 | 2.969960e-51 | -8.615850e-47 |
| Msa0500770 | Msa1263500 | 0.806314 | 8.734222e-50 | -8.615850e-47 |
| Msa0500770 | Msa1299480 | 0.839852 | 1.236921e-57 | -8.615850e-47 |
| Msa0500770 | Msa1307930 | 0.819568 | 1.084609e-52 | -8.615850e-47 |
| Msa0500770 | Msa1333700 | 0.846114 | 2.661499e-59 | -8.615850e-47 |
| Msa0500770 | Msa1349830 | 0.826663 | 2.396976e-54 | -8.615850e-47 |
| Msa0500770 | Msa1369450 | 0.826047 | 3.361616e-54 | -8.615850e-47 |
| Msa0500770 | Msa1377050 | 0.849368 | 3.382715e-60 | -8.615850e-47 |
| Msa0500770 | Msa1387610 | 0.823411 | 1.405163e-53 | -8.615850e-47 |
| Msa0500770 | Msa1399930 | 0.971767 | 1.100956e-133 | -8.615850e-47 |
| Msa0500770 | Msa1422230 | 0.823034 | 1.721304e-53 | -8.615850e-47 |
| Msa0500770 | Msa1427000 | 0.829821 | 4.153394e-55 | -8.615850e-47 |
| Msa0500770 | Msa1435320 | 0.832803 | 7.673177e-56 | -8.615850e-47 |
| Msa0500770 | Msa1438160 | 0.809939 | 1.476809e-50 | -8.615850e-47 |
| Msa0500770 | Msa1439780 | 0.830679 | 2.563139e-55 | -8.615850e-47 |
| Msa0500770 | Msa1443400 | 0.833261 | 5.904721e-56 | -8.615850e-47 |
| Msa0500770 | Msa1448040 | 0.832200 | 1.082922e-55 | -8.615850e-47 |
| Msa0500770 | Msa1449470 | 0.815520 | 8.863995e-52 | -8.615850e-47 |
| Msa0500770 | Msa1453600 | 0.814816 | 1.270466e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500770 | MtrunA17_Chr3g0133691 | 86.064 | 409 | 13 | 4 | 322 | 686 | 1 | 409 | 0.0 | 699 |
| Msa0500770 | MtrunA17_Chr3g0133691 | 75.959 | 391 | 34 | 3 | 1 | 331 | 1 | 391 | 0.0 | 588 |
| Msa0500770 | MtrunA17_Chr3g0133681 | 82.108 | 408 | 30 | 3 | 322 | 686 | 1 | 408 | 0.0 | 648 |
| Msa0500770 | MtrunA17_Chr3g0133681 | 81.330 | 391 | 13 | 3 | 1 | 331 | 1 | 391 | 0.0 | 599 |
| Msa0500770 | MtrunA17_Chr1g0153781 | 69.975 | 403 | 76 | 5 | 325 | 682 | 5 | 407 | 0.0 | 565 |
| Msa0500770 | MtrunA17_Chr1g0153781 | 64.872 | 390 | 75 | 5 | 4 | 331 | 5 | 394 | 4.90e-171 | 495 |
| Msa0500770 | MtrunA17_Chr5g0402441 | 48.241 | 398 | 155 | 7 | 325 | 677 | 3 | 394 | 3.78e-118 | 359 |
| Msa0500770 | MtrunA17_Chr5g0402441 | 45.269 | 391 | 146 | 7 | 4 | 332 | 3 | 387 | 1.16e-103 | 322 |
| Msa0500770 | MtrunA17_Chr5g0402451 | 48.825 | 383 | 149 | 6 | 339 | 675 | 8 | 389 | 2.70e-117 | 357 |
| Msa0500770 | MtrunA17_Chr5g0402451 | 45.119 | 379 | 144 | 6 | 18 | 333 | 8 | 385 | 3.66e-102 | 318 |
| Msa0500770 | MtrunA17_Chr8g0335581 | 41.582 | 392 | 165 | 14 | 331 | 674 | 11 | 386 | 1.27e-75 | 249 |
| Msa0500770 | MtrunA17_Chr8g0335581 | 40.642 | 374 | 151 | 13 | 10 | 323 | 11 | 373 | 4.56e-66 | 223 |
| Msa0500770 | MtrunA17_Chr8g0335621 | 38.931 | 393 | 174 | 13 | 331 | 674 | 53 | 428 | 1.32e-69 | 234 |
| Msa0500770 | MtrunA17_Chr8g0335621 | 37.337 | 383 | 167 | 12 | 10 | 331 | 53 | 423 | 5.36e-60 | 208 |
| Msa0500770 | MtrunA17_Chr8g0335611 | 38.677 | 393 | 175 | 13 | 331 | 674 | 22 | 397 | 2.71e-69 | 232 |
| Msa0500770 | MtrunA17_Chr8g0335611 | 37.598 | 383 | 166 | 12 | 10 | 331 | 22 | 392 | 7.12e-61 | 210 |
| Msa0500770 | MtrunA17_Chr8g0335651 | 41.710 | 386 | 158 | 10 | 331 | 674 | 23 | 383 | 7.49e-64 | 217 |
| Msa0500770 | MtrunA17_Chr8g0335651 | 39.633 | 381 | 146 | 11 | 10 | 331 | 23 | 378 | 2.38e-53 | 189 |
| Msa0500770 | MtrunA17_Chr8g0335591 | 36.269 | 386 | 192 | 10 | 331 | 674 | 22 | 395 | 8.11e-61 | 209 |
| Msa0500770 | MtrunA17_Chr8g0335591 | 35.620 | 379 | 173 | 11 | 10 | 329 | 22 | 388 | 4.11e-55 | 194 |
| Msa0500770 | MtrunA17_Chr8g0335631 | 38.281 | 384 | 185 | 10 | 331 | 674 | 22 | 393 | 1.09e-56 | 198 |
| Msa0500770 | MtrunA17_Chr8g0335631 | 38.441 | 372 | 160 | 10 | 10 | 324 | 22 | 381 | 4.97e-52 | 186 |
| Msa0500770 | MtrunA17_Chr1g0199801 | 27.638 | 398 | 203 | 17 | 341 | 677 | 75 | 448 | 4.87e-25 | 108 |
| Msa0500770 | MtrunA17_Chr1g0199801 | 29.592 | 294 | 161 | 12 | 20 | 282 | 75 | 353 | 5.79e-24 | 105 |
| Msa0500770 | MtrunA17_Chr7g0259871 | 26.136 | 264 | 159 | 8 | 22 | 261 | 32 | 283 | 4.07e-18 | 87.0 |
| Msa0500770 | MtrunA17_Chr7g0259871 | 25.614 | 285 | 168 | 11 | 343 | 599 | 32 | 300 | 3.08e-16 | 81.3 |
| Msa0500770 | MtrunA17_Chr1g0185551 | 24.823 | 282 | 164 | 11 | 343 | 594 | 32 | 295 | 1.52e-14 | 75.9 |
| Msa0500770 | MtrunA17_Chr1g0185551 | 24.111 | 253 | 152 | 9 | 22 | 248 | 32 | 270 | 2.38e-14 | 75.5 |
| Msa0500770 | MtrunA17_Chr2g0292051 | 27.445 | 317 | 175 | 15 | 308 | 599 | 33 | 319 | 9.82e-14 | 73.9 |
| Msa0500770 | MtrunA17_Chr2g0292051 | 26.000 | 300 | 176 | 12 | 12 | 290 | 61 | 335 | 6.40e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0500770 | AT2G26560.1 | 55.725 | 393 | 130 | 4 | 332 | 681 | 10 | 401 | 3.03e-144 | 427 |
| Msa0500770 | AT2G26560.1 | 53.763 | 372 | 111 | 4 | 11 | 322 | 10 | 380 | 1.04e-125 | 379 |
| Msa0500770 | AT4G37070.2 | 52.442 | 389 | 142 | 3 | 333 | 678 | 11 | 399 | 2.89e-132 | 396 |
| Msa0500770 | AT4G37070.2 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 4.87e-112 | 344 |
| Msa0500770 | AT4G37050.1 | 51.064 | 423 | 149 | 7 | 313 | 679 | 4 | 424 | 3.22e-127 | 384 |
| Msa0500770 | AT4G37050.1 | 47.382 | 382 | 129 | 6 | 13 | 324 | 28 | 407 | 1.11e-100 | 315 |
| Msa0500770 | AT4G37060.1 | 50.515 | 388 | 149 | 3 | 334 | 678 | 12 | 399 | 9.59e-127 | 382 |
| Msa0500770 | AT4G37060.1 | 46.774 | 372 | 138 | 3 | 13 | 324 | 12 | 383 | 4.89e-107 | 331 |
| Msa0500770 | AT4G37070.3 | 51.743 | 373 | 137 | 3 | 333 | 662 | 11 | 383 | 1.26e-123 | 373 |
| Msa0500770 | AT4G37070.3 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 3.74e-112 | 343 |
| Msa0500770 | AT4G37070.1 | 51.743 | 373 | 137 | 3 | 333 | 662 | 11 | 383 | 1.26e-123 | 373 |
| Msa0500770 | AT4G37070.1 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 3.74e-112 | 343 |
| Msa0500770 | AT4G37060.2 | 46.778 | 419 | 149 | 4 | 334 | 678 | 12 | 430 | 3.48e-120 | 366 |
| Msa0500770 | AT4G37060.2 | 43.176 | 403 | 138 | 4 | 13 | 324 | 12 | 414 | 1.49e-100 | 315 |
| Msa0500770 | AT4G37070.4 | 49.598 | 373 | 134 | 4 | 333 | 662 | 11 | 372 | 1.32e-114 | 349 |
| Msa0500770 | AT4G37070.4 | 47.453 | 373 | 125 | 5 | 12 | 324 | 11 | 372 | 3.18e-103 | 320 |
| Msa0500770 | AT5G43590.1 | 47.044 | 389 | 152 | 8 | 333 | 674 | 6 | 387 | 1.93e-92 | 293 |
| Msa0500770 | AT5G43590.1 | 44.297 | 377 | 139 | 9 | 12 | 324 | 6 | 375 | 1.51e-79 | 259 |
| Msa0500770 | AT5G43590.2 | 45.906 | 403 | 164 | 8 | 319 | 674 | 59 | 454 | 1.43e-91 | 293 |
| Msa0500770 | AT5G43590.2 | 44.297 | 377 | 139 | 9 | 12 | 324 | 73 | 442 | 1.46e-78 | 259 |
| Msa0500770 | AT4G29800.2 | 26.076 | 395 | 223 | 16 | 341 | 681 | 121 | 500 | 1.97e-22 | 102 |
| Msa0500770 | AT4G29800.2 | 27.304 | 293 | 163 | 13 | 20 | 273 | 121 | 402 | 2.67e-18 | 89.4 |
| Msa0500770 | AT3G54950.1 | 28.862 | 246 | 136 | 8 | 20 | 241 | 98 | 328 | 3.04e-22 | 101 |
| Msa0500770 | AT3G54950.1 | 31.325 | 249 | 126 | 10 | 341 | 562 | 98 | 328 | 3.77e-22 | 100 |
| Msa0500770 | AT4G29800.1 | 26.329 | 395 | 221 | 17 | 341 | 681 | 121 | 499 | 3.12e-22 | 101 |
| Msa0500770 | AT4G29800.1 | 27.304 | 293 | 163 | 13 | 20 | 273 | 121 | 402 | 2.73e-18 | 89.4 |
| Msa0500770 | AT2G39220.1 | 28.571 | 287 | 161 | 12 | 20 | 281 | 108 | 375 | 7.21e-22 | 100 |
| Msa0500770 | AT2G39220.1 | 28.276 | 290 | 164 | 12 | 341 | 605 | 108 | 378 | 2.67e-21 | 98.6 |
| Msa0500770 | AT3G63200.1 | 27.935 | 247 | 134 | 10 | 343 | 562 | 32 | 261 | 1.18e-17 | 85.9 |
| Msa0500770 | AT3G63200.1 | 26.721 | 247 | 137 | 9 | 22 | 241 | 32 | 261 | 2.53e-17 | 85.1 |
Find 176 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAATCTTTCTCCAATT+TGG | 0.154529 | 3_4:+41320577 | None:intergenic |
| TCTCTATATTAAAGCATTAT+TGG | 0.161822 | 3_4:+41314417 | None:intergenic |
| TGGACAATGTTCCAAGTAAA+AGG | 0.173001 | 3_4:+41321808 | None:intergenic |
| TTAGATAAACTTTGCCAAAT+TGG | 0.206887 | 3_4:-41320591 | Msa0500770:CDS |
| GCATCGACGGTGGTGGTATT+AGG | 0.208767 | 3_4:-41322018 | Msa0500770:CDS |
| CCTCTCTTGAGAAAGTATTT+TGG | 0.229410 | 3_4:+41314468 | None:intergenic |
| TCAACAATTTGTCACCAATT+TGG | 0.229429 | 3_4:+41314664 | None:intergenic |
| ATGTTTGAGCCTATTGAAAA+TGG | 0.238787 | 3_4:-41320519 | Msa0500770:CDS |
| GGCAGCAAAATGGGGTCTTT+TGG | 0.249313 | 3_4:-41321040 | Msa0500770:CDS |
| ATGTTTGAGCCAATTGAAAA+TGG | 0.253040 | 3_4:-41314606 | Msa0500770:CDS |
| ATTCAAAACTGGCAGCAAAA+TGG | 0.257627 | 3_4:-41321050 | Msa0500770:CDS |
| TCTAAATTGACCTTAGATAT+TGG | 0.264791 | 3_4:+41314636 | None:intergenic |
| TTGACTAAAGATATCAATTA+AGG | 0.272567 | 3_4:+41320990 | None:intergenic |
| AGGTATTTCCCATCATATTT+TGG | 0.273356 | 3_4:+41315445 | None:intergenic |
| TTGACTAAACATGTCGATTA+AGG | 0.277813 | 3_4:+41314836 | None:intergenic |
| ATGCGAAAATGGCAGCAAAA+TGG | 0.281352 | 3_4:-41314896 | Msa0500770:CDS |
| GGAGAGTGTTCCAAGTAAAA+TGG | 0.292232 | 3_4:+41315615 | None:intergenic |
| GCTGCTCCTACTTATCTTCC+TGG | 0.297373 | 3_4:-41321401 | Msa0500770:CDS |
| TAGTCAATCATCAGCTGATA+TGG | 0.302481 | 3_4:-41314820 | Msa0500770:intron |
| GTATCGATGGTGGCGGCATT+AGG | 0.306980 | 3_4:-41315824 | Msa0500770:CDS |
| ATTGAAGAAACCAGTATCTA+AGG | 0.307953 | 3_4:-41320559 | Msa0500770:CDS |
| CACAAACACCGCCGTCAATA+AGG | 0.313302 | 3_4:+41315176 | None:intergenic |
| CATCGACGGTGGTGGTATTA+GGG | 0.320659 | 3_4:-41322017 | Msa0500770:CDS |
| TATCGATGGTGGCGGCATTA+GGG | 0.321921 | 3_4:-41315823 | Msa0500770:CDS |
| TTCAAAACTGGCAGCAAAAT+GGG | 0.322622 | 3_4:-41321049 | Msa0500770:CDS |
| AGGTATTTCCCATCGTATTT+TGG | 0.327115 | 3_4:+41321599 | None:intergenic |
| TGCGAAAATGGCAGCAAAAT+GGG | 0.333561 | 3_4:-41314895 | Msa0500770:CDS |
| GAACTTATGCAGGCACTTGC+TGG | 0.336587 | 3_4:-41321657 | Msa0500770:intron |
| TCTAAATTAACCTTAGATAC+TGG | 0.337016 | 3_4:+41320549 | None:intergenic |
| AGTGGACGTTGTTTATCATT+TGG | 0.339325 | 3_4:+41321854 | None:intergenic |
| GTGTGTTGCCTTCTGTATCT+TGG | 0.340354 | 3_4:+41315209 | None:intergenic |
| TTGTGTTGTGGGAAGATCTT+AGG | 0.341209 | 3_4:+41315594 | None:intergenic |
| GATTACTTTGATGTGATTAC+AGG | 0.344649 | 3_4:-41315723 | Msa0500770:CDS |
| GATTACTTTGATGTGATTAC+AGG | 0.344649 | 3_4:-41321917 | Msa0500770:CDS |
| TAGTCAATCCTCTGGAGATA+TGG | 0.353427 | 3_4:-41320974 | Msa0500770:intron |
| AAATGTCGGAATCACAATAT+TGG | 0.358725 | 3_4:+41315369 | None:intergenic |
| TTGATAATATCACTGGGAAC+TGG | 0.359899 | 3_4:-41314945 | Msa0500770:CDS |
| GCTATATTCCATGGGTTTGA+TGG | 0.366448 | 3_4:+41321128 | None:intergenic |
| ATTATATTCCATAGGCTTGA+TGG | 0.369030 | 3_4:+41314974 | None:intergenic |
| ATTCTTGAAGTTGCGATTCA+AGG | 0.379087 | 3_4:+41315772 | None:intergenic |
| ATTCTTGAAGTTGCGATTCA+AGG | 0.379087 | 3_4:+41321966 | None:intergenic |
| ACAAAAGTTTGATTCAAAAC+TGG | 0.388763 | 3_4:-41321061 | Msa0500770:CDS |
| GGCAGCAAAATGGGGTCTGC+TGG | 0.394148 | 3_4:-41314886 | Msa0500770:CDS |
| GTACAGTCCCTTCTGTATCT+TGG | 0.396391 | 3_4:+41321363 | None:intergenic |
| TGAAGTGGTAAGGGAGAAGT+TGG | 0.397346 | 3_4:-41315419 | Msa0500770:CDS |
| GTGTGGTTAGGGAGAAGCTT+GGG | 0.398981 | 3_4:-41321571 | Msa0500770:CDS |
| GATGATATTTCAGACTTTAG+TGG | 0.399940 | 3_4:-41315048 | Msa0500770:intron |
| GAACTCATGCAGGGACTTGT+TGG | 0.403597 | 3_4:-41315503 | Msa0500770:intron |
| AAACGTGGGGATCACAATAT+TGG | 0.404692 | 3_4:+41321523 | None:intergenic |
| AATACCTACACAGTGTGGTT+AGG | 0.406721 | 3_4:-41321583 | Msa0500770:CDS |
| CAGGCACTTGCTGGGACTGG+TGG | 0.408008 | 3_4:-41321648 | Msa0500770:CDS |
| CAAAATGGGGTCTGCTGGAT+TGG | 0.411164 | 3_4:-41314881 | Msa0500770:CDS |
| GTTGAAGAAACCAATATCTA+AGG | 0.412435 | 3_4:-41314646 | Msa0500770:CDS |
| GCTGCACCTACATATCTTCC+AGG | 0.418184 | 3_4:-41315247 | Msa0500770:CDS |
| AACTCATGCAGGGACTTGTT+GGG | 0.426138 | 3_4:-41315502 | Msa0500770:intron |
| TGTTTGAGCCTATTGAAAAT+GGG | 0.427789 | 3_4:-41320518 | Msa0500770:CDS |
| TCTAAGGTTAATTTAGAGAA+TGG | 0.429460 | 3_4:-41320543 | Msa0500770:CDS |
| GAAATTGTTCAAATCATTAA+CGG | 0.431351 | 3_4:-41321624 | Msa0500770:CDS |
| GAAGTGGTAAGGGAGAAGTT+GGG | 0.431386 | 3_4:-41315418 | Msa0500770:CDS |
| CTAATAATCTCATTGGGCAC+TGG | 0.438749 | 3_4:-41321099 | Msa0500770:CDS |
| CAGATTCAGCCTCCCACCTA+TGG | 0.440384 | 3_4:-41315867 | Msa0500770:CDS |
| AACTTATGCAGGCACTTGCT+GGG | 0.440494 | 3_4:-41321656 | Msa0500770:intron |
| TGTTTGAGCCAATTGAAAAT+GGG | 0.441270 | 3_4:-41314605 | Msa0500770:CDS |
| CAAATTCAGCCTCCCACCTA+TGG | 0.443188 | 3_4:-41322061 | Msa0500770:CDS |
| AAATTGTTCAAATCATTAAC+GGG | 0.445917 | 3_4:-41321623 | Msa0500770:CDS |
| TAGAAAACGGCTATATTCCA+TGG | 0.449347 | 3_4:+41321119 | None:intergenic |
| AAATTATTCAGATCATTAGT+AGG | 0.450532 | 3_4:-41315469 | Msa0500770:CDS |
| AGGAACTCGAGGATAGTTGC+AGG | 0.459678 | 3_4:+41315792 | None:intergenic |
| TCGCTTCTTGATAATATCAC+TGG | 0.461430 | 3_4:-41314952 | Msa0500770:CDS |
| GGACAATGTTCCAAGTAAAA+GGG | 0.464623 | 3_4:+41321809 | None:intergenic |
| CTTCTATGCCATCAAGCCTA+TGG | 0.470246 | 3_4:-41314982 | Msa0500770:CDS |
| GCCTCCCACCTATGGAAACT+TGG | 0.472414 | 3_4:-41315859 | Msa0500770:CDS |
| CCAAAATACTTTCTCAAGAG+AGG | 0.474475 | 3_4:-41314468 | Msa0500770:CDS |
| CAGGGACTTGTTGGGATCAG+TGG | 0.475838 | 3_4:-41315494 | Msa0500770:CDS |
| GATATCTTTAGTCAATCCTC+TGG | 0.480270 | 3_4:-41320982 | Msa0500770:CDS |
| GATATACGTACTTGTGTTGT+GGG | 0.481161 | 3_4:+41315583 | None:intergenic |
| AGGCACTTGCTGGGACTGGT+GGG | 0.481875 | 3_4:-41321647 | Msa0500770:CDS |
| ATGCAGGCACTTGCTGGGAC+TGG | 0.483803 | 3_4:-41321651 | Msa0500770:intron |
| TGACTAAACATGTCGATTAA+GGG | 0.483825 | 3_4:+41314837 | None:intergenic |
| TCTAAGGTCAATTTAGAGAA+TGG | 0.484352 | 3_4:-41314630 | Msa0500770:CDS |
| ATACCTACACAGTGTGGTTA+GGG | 0.485763 | 3_4:-41321582 | Msa0500770:CDS |
| CATGAATTCAACCTTATTGA+CGG | 0.485875 | 3_4:-41315187 | Msa0500770:CDS |
| AATACCTTCATGAAGTGGTA+AGG | 0.488193 | 3_4:-41315429 | Msa0500770:CDS |
| CCAATGAGATTATTAGAAAA+CGG | 0.491994 | 3_4:+41321106 | None:intergenic |
| TTAGTAGGACCAAAATATGA+TGG | 0.496410 | 3_4:-41315454 | Msa0500770:CDS |
| AGGAACTCGAGAATAGTTGC+GGG | 0.498265 | 3_4:+41321986 | None:intergenic |
| AAGTGGTAAGGGAGAAGTTG+GGG | 0.499535 | 3_4:-41315417 | Msa0500770:CDS |
| CGTGAGTTCAACCTCATTGA+TGG | 0.500018 | 3_4:-41321341 | Msa0500770:CDS |
| TGACTAAAGATATCAATTAA+GGG | 0.500555 | 3_4:+41320991 | None:intergenic |
| CTAACCAAGAAGCTCTCAAA+AGG | 0.500687 | 3_4:-41314578 | Msa0500770:intron |
| TTGTAACCAGGAAGATAAGT+AGG | 0.501497 | 3_4:+41321395 | None:intergenic |
| AGGGACTTGTTGGGATCAGT+GGG | 0.501975 | 3_4:-41315493 | Msa0500770:CDS |
| CCAACCAAGAAGCTCTCAAA+AGG | 0.511212 | 3_4:-41320491 | Msa0500770:intron |
| TTGCATGGATGCTCGACTCT+CGG | 0.512268 | 3_4:-41315290 | Msa0500770:CDS |
| TTGCATGGATGCTCGACTCT+CGG | 0.512268 | 3_4:-41321444 | Msa0500770:CDS |
| GATCAAGAAAACCCCTTGCA+TGG | 0.513274 | 3_4:-41315305 | Msa0500770:CDS |
| TTAAAGCATTATTGGTGTGA+GGG | 0.513489 | 3_4:+41314425 | None:intergenic |
| CGCTTCTTGATAATATCACT+GGG | 0.516348 | 3_4:-41314951 | Msa0500770:CDS |
| TTGTAGCCTGGAAGATATGT+AGG | 0.518439 | 3_4:+41315241 | None:intergenic |
| GGCACTTGCTGGGACTGGTG+GGG | 0.520089 | 3_4:-41321646 | Msa0500770:CDS |
| GTAAAAGGGCTTGATATCCT+TGG | 0.530283 | 3_4:+41321823 | None:intergenic |
| TGGTTCTTGAAATTGTAGCC+TGG | 0.542827 | 3_4:+41315229 | None:intergenic |
| GTCACTAAGTTTCCATAGGT+GGG | 0.548697 | 3_4:+41322049 | None:intergenic |
| AGTCACTAAGTTTCCATAGG+TGG | 0.549310 | 3_4:+41322048 | None:intergenic |
| TAAAGCATTATTGGTGTGAG+GGG | 0.552577 | 3_4:+41314426 | None:intergenic |
| GATCAAGAAAGCCCCTTGCA+TGG | 0.552645 | 3_4:-41321459 | Msa0500770:CDS |
| TGATAATATCACTGGGAACT+GGG | 0.554557 | 3_4:-41314944 | Msa0500770:CDS |
| AGTCACCAAGTTTCCATAGG+TGG | 0.554860 | 3_4:+41315854 | None:intergenic |
| AATAGTCACTAAGTTTCCAT+AGG | 0.559064 | 3_4:+41322045 | None:intergenic |
| TATAGTCACCAAGTTTCCAT+AGG | 0.562234 | 3_4:+41315851 | None:intergenic |
| AGATATACGTACTTGTGTTG+TGG | 0.562759 | 3_4:+41315582 | None:intergenic |
| AGAAAACGGCTATATTCCAT+GGG | 0.563089 | 3_4:+41321120 | None:intergenic |
| ATCGACGGTGGTGGTATTAG+GGG | 0.564683 | 3_4:-41322016 | Msa0500770:CDS |
| GCGAAAATGGCAGCAAAATG+GGG | 0.566216 | 3_4:-41314894 | Msa0500770:CDS |
| GAGAGTCGAGCATCCATGCA+AGG | 0.566902 | 3_4:+41321446 | None:intergenic |
| ATACAGGATGATACATTGAC+GGG | 0.570155 | 3_4:-41314738 | Msa0500770:intron |
| ATTAAAGCATTATTGGTGTG+AGG | 0.572481 | 3_4:+41314424 | None:intergenic |
| AAGATAAGTAGGAGCAGCAG+AGG | 0.572780 | 3_4:+41321406 | None:intergenic |
| GTCACCAAGTTTCCATAGGT+GGG | 0.573182 | 3_4:+41315855 | None:intergenic |
| AGAGTCGAGCATCCATGCAA+GGG | 0.575582 | 3_4:+41321447 | None:intergenic |
| TAGTAGGACCAAAATATGAT+GGG | 0.575853 | 3_4:-41315453 | Msa0500770:CDS |
| TCTCCCTTACCACTTCATGA+AGG | 0.576054 | 3_4:+41315425 | None:intergenic |
| ATACCTTCATGAAGTGGTAA+GGG | 0.581117 | 3_4:-41315428 | Msa0500770:CDS |
| TGGTGTTTGTGCAAATAATC+CGG | 0.582343 | 3_4:-41321318 | Msa0500770:intron |
| ATCGATGGTGGCGGCATTAG+GGG | 0.586031 | 3_4:-41315822 | Msa0500770:CDS |
| GATACAGGATGATACATTGA+CGG | 0.586303 | 3_4:-41314739 | Msa0500770:intron |
| CTGCTGGATTGGTTAACTCA+CGG | 0.586370 | 3_4:-41314870 | Msa0500770:CDS |
| AATTAGACGGTGAATCTGCT+AGG | 0.587927 | 3_4:-41315752 | Msa0500770:CDS |
| AATTAGACGGTGAATCTGCT+AGG | 0.587927 | 3_4:-41321946 | Msa0500770:CDS |
| GAGAGTCGAGCATCCATGCA+AGG | 0.588475 | 3_4:+41315292 | None:intergenic |
| GTTTGAGCCAATTGAAAATG+GGG | 0.588730 | 3_4:-41314604 | Msa0500770:CDS |
| ATTCTAAGCATCGACGGTGG+TGG | 0.589977 | 3_4:-41322025 | Msa0500770:CDS |
| TGTGAGGGGATTTCAACTCT+CGG | 0.590652 | 3_4:+41314440 | None:intergenic |
| AGAGTCGAGCATCCATGCAA+GGG | 0.591569 | 3_4:+41315293 | None:intergenic |
| CACAAACACCACCATCAATG+AGG | 0.592240 | 3_4:+41321330 | None:intergenic |
| AAGAAGCGATTATATTCCAT+AGG | 0.592377 | 3_4:+41314966 | None:intergenic |
| GTTTGAGCCTATTGAAAATG+GGG | 0.597788 | 3_4:-41320517 | Msa0500770:CDS |
| TTCAAGAACCAAGATACAGA+AGG | 0.598347 | 3_4:-41321371 | Msa0500770:CDS |
| ATCATTTGGAGCACTTAACA+TGG | 0.599256 | 3_4:+41321868 | None:intergenic |
| TAACGGGACCAAAATACGAT+GGG | 0.602205 | 3_4:-41321607 | Msa0500770:CDS |
| TCAAAACTGGCAGCAAAATG+GGG | 0.603239 | 3_4:-41321048 | Msa0500770:CDS |
| AAGGAACTCGAGAATAGTTG+CGG | 0.605964 | 3_4:+41321985 | None:intergenic |
| CGGTGTTTGTGCAAATAACC+CGG | 0.607334 | 3_4:-41315164 | Msa0500770:intron |
| AGTGTGGTTAGGGAGAAGCT+TGG | 0.607976 | 3_4:-41321572 | Msa0500770:CDS |
| TGGGAAATACCTTCATGAAG+TGG | 0.608258 | 3_4:-41315434 | Msa0500770:CDS |
| GTGACTATACTAAGTATCGA+TGG | 0.613910 | 3_4:-41315837 | Msa0500770:CDS |
| TTCAAGAACCAAGATACAGA+AGG | 0.625819 | 3_4:-41315217 | Msa0500770:CDS |
| TGGTTCTTGAAGTTGTAACC+AGG | 0.626960 | 3_4:+41321383 | None:intergenic |
| AAGATATGTAGGTGCAGCAG+AGG | 0.629508 | 3_4:+41315252 | None:intergenic |
| ATACTAAGTATCGATGGTGG+CGG | 0.632401 | 3_4:-41315831 | Msa0500770:CDS |
| TCAAGAACCAAGATACAGAA+GGG | 0.635453 | 3_4:-41321370 | Msa0500770:CDS |
| TGTGGTTAGGGAGAAGCTTG+GGG | 0.637104 | 3_4:-41321570 | Msa0500770:CDS |
| GTTGCGATTCAAGGAACTCG+AGG | 0.637528 | 3_4:+41315781 | None:intergenic |
| TTAACGGGACCAAAATACGA+TGG | 0.640656 | 3_4:-41321608 | Msa0500770:CDS |
| CTAAGAATTTGCAAGCAATG+AGG | 0.644090 | 3_4:+41314387 | None:intergenic |
| TAAGGGAGTTGAACCACCGT+GGG | 0.644389 | 3_4:+41321008 | None:intergenic |
| TCTCCCTAACCACACTGTGT+AGG | 0.645782 | 3_4:+41321579 | None:intergenic |
| GAGTCGAGCATCCATGCAAG+GGG | 0.652281 | 3_4:+41321448 | None:intergenic |
| AGTGGTAAGGGAGAAGTTGG+GGG | 0.653344 | 3_4:-41315416 | Msa0500770:CDS |
| TCGCAACTTCAAGAATTAGA+CGG | 0.655679 | 3_4:-41315765 | Msa0500770:CDS |
| TCGCAACTTCAAGAATTAGA+CGG | 0.655679 | 3_4:-41321959 | Msa0500770:CDS |
| AAATACTTTCTCAAGAGAGG+AGG | 0.656017 | 3_4:-41314465 | Msa0500770:CDS |
| GAAATCAACCATATCTCCAG+AGG | 0.656859 | 3_4:+41320966 | None:intergenic |
| GAGTCGAGCATCCATGCAAG+GGG | 0.660750 | 3_4:+41315294 | None:intergenic |
| ACCAAGTTTCCATAGGTGGG+AGG | 0.664617 | 3_4:+41315858 | None:intergenic |
| GTGACTATTCTAAGCATCGA+CGG | 0.670875 | 3_4:-41322031 | Msa0500770:CDS |
| ACTAAGTTTCCATAGGTGGG+AGG | 0.690895 | 3_4:+41322052 | None:intergenic |
| TTAAGGGAGTTGAACCACCG+TGG | 0.712500 | 3_4:+41321007 | None:intergenic |
| GAATTCAACCTTATTGACGG+CGG | 0.715959 | 3_4:-41315184 | Msa0500770:CDS |
| ACTATACTAAGTATCGATGG+TGG | 0.718258 | 3_4:-41315834 | Msa0500770:CDS |
| GAGTTCAACCTCATTGATGG+TGG | 0.718974 | 3_4:-41321338 | Msa0500770:CDS |
| CTGGATTGGTTAACTCACGG+TGG | 0.721558 | 3_4:-41314867 | Msa0500770:CDS |
| TTGGATTGGTTAACCCACGG+TGG | 0.722351 | 3_4:-41321021 | Msa0500770:CDS |
| TGGGAAATACCTACACAGTG+TGG | 0.740267 | 3_4:-41321588 | Msa0500770:CDS |
| ACTATTCTAAGCATCGACGG+TGG | 0.761071 | 3_4:-41322028 | Msa0500770:CDS |
| GGGACTTGTTGGGATCAGTG+GGG | 0.764722 | 3_4:-41315492 | Msa0500770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAGTTTTATTTGTTTT+TGG | - | chr3_4:41315240-41315259 | Msa0500770:CDS | 10.0% |
| !!! | TAAGAAAATATTCATTTTTT+AGG | + | chr3_4:41315735-41315754 | None:intergenic | 10.0% |
| !! | ATTTAATTAATACAATACAT+GGG | + | chr3_4:41316715-41316734 | None:intergenic | 10.0% |
| !!! | TATTTAGTAAATTTTGTTTT+AGG | + | chr3_4:41316918-41316937 | None:intergenic | 10.0% |
| !! | ATAGAGTAATAATATTATTA+AGG | - | chr3_4:41318246-41318265 | Msa0500770:intron | 10.0% |
| !! | TAGAGTAATAATATTATTAA+GGG | - | chr3_4:41318247-41318266 | Msa0500770:intron | 10.0% |
| !!! | TAAAAAATTCTAACTTTTTT+GGG | + | chr3_4:41318561-41318580 | None:intergenic | 10.0% |
| !!! | TAAATATGAATTTTTATGTT+TGG | - | chr3_4:41318594-41318613 | Msa0500770:intron | 10.0% |
| !! | ACAAAAATTTACTTAAAAAT+AGG | - | chr3_4:41318723-41318742 | Msa0500770:intron | 10.0% |
| !! | CAAAAATTTACTTAAAAATA+GGG | - | chr3_4:41318724-41318743 | Msa0500770:intron | 10.0% |
| !!! | ATTAGGTTAATTAAATTTTA+AGG | + | chr3_4:41318955-41318974 | None:intergenic | 10.0% |
| !!! | TTATTTATAAGAAATTTTGT+TGG | - | chr3_4:41319539-41319558 | Msa0500770:intron | 10.0% |
| !!! | ATTTTGTACAAAAAAAAAAA+AGG | - | chr3_4:41319576-41319595 | Msa0500770:intron | 10.0% |
| !!! | AAAAAGGTTATTTTTTTATA+AGG | - | chr3_4:41319592-41319611 | Msa0500770:intron | 10.0% |
| !!! | AAAAGGTTATTTTTTTATAA+GGG | - | chr3_4:41319593-41319612 | Msa0500770:intron | 10.0% |
| !! | AAAAAATCCTATTAAAATAT+AGG | + | chr3_4:41319674-41319693 | None:intergenic | 10.0% |
| !!! | AATATAAGAATTTGATTTAT+CGG | + | chr3_4:41320096-41320115 | None:intergenic | 10.0% |
| !! | TATAAATAATATTAATTGGT+TGG | + | chr3_4:41320458-41320477 | None:intergenic | 10.0% |
| !! | GGTTTATAAATAATATTAAT+TGG | + | chr3_4:41320462-41320481 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTTACAAAATGT+TGG | + | chr3_4:41320928-41320947 | None:intergenic | 10.0% |
| !! | TTATAAGATGAGAAAATAAT+TGG | + | chr3_4:41314991-41315010 | None:intergenic | 15.0% |
| !! | TTATTCAATGAATCTAAAAA+AGG | + | chr3_4:41315661-41315680 | None:intergenic | 15.0% |
| !! | TCATTCAATGATTATATTTA+TGG | - | chr3_4:41316012-41316031 | Msa0500770:intron | 15.0% |
| !!! | AATTTTCTACATTTTTTTTG+AGG | + | chr3_4:41316063-41316082 | None:intergenic | 15.0% |
| !!! | TTTGTATTTATAATTTGTGT+TGG | - | chr3_4:41316308-41316327 | Msa0500770:intron | 15.0% |
| !! | TTTATTAAAGAGAGTTTATT+TGG | - | chr3_4:41316575-41316594 | Msa0500770:intron | 15.0% |
| !! | ATTTAGAGAGTTTATTAAAA+CGG | - | chr3_4:41316608-41316627 | Msa0500770:intron | 15.0% |
| !! | CATTTAATTAATACAATACA+TGG | + | chr3_4:41316716-41316735 | None:intergenic | 15.0% |
| !! | TGTGTATGTATAAAAATTAA+CGG | - | chr3_4:41317359-41317378 | Msa0500770:intron | 15.0% |
| !! | TTATGAAATAAAAGAATGTT+GGG | + | chr3_4:41317658-41317677 | None:intergenic | 15.0% |
| !! | TTTATGAAATAAAAGAATGT+TGG | + | chr3_4:41317659-41317678 | None:intergenic | 15.0% |
| !!! | GTAAAAAATTCTAACTTTTT+TGG | + | chr3_4:41318562-41318581 | None:intergenic | 15.0% |
| !! | GAAAAGTTAGTATATTTATA+AGG | - | chr3_4:41318815-41318834 | Msa0500770:intron | 15.0% |
| !!! | GATTAAATATTCAAGTTATT+AGG | + | chr3_4:41318972-41318991 | None:intergenic | 15.0% |
| !!! | GTGCTTAAAATATTAATTTT+AGG | - | chr3_4:41320027-41320046 | Msa0500770:intron | 15.0% |
| !! | TTAATATAAATCATCAATAG+TGG | + | chr3_4:41320060-41320079 | None:intergenic | 15.0% |
| !! | TTATAAGATGAGAAAATAAT+TGG | + | chr3_4:41314991-41315010 | None:intergenic | 15.0% |
| !! | ATACTATTTAGTATATATAC+CGG | + | chr3_4:41321328-41321347 | None:intergenic | 15.0% |
| !! | TTTACAAGTTAAATAAAGTT+TGG | + | chr3_4:41321374-41321393 | None:intergenic | 15.0% |
| !! | GAAATTGTTCAAATCATTAA+CGG | - | chr3_4:41314846-41314865 | Msa0500770:CDS | 20.0% |
| !! | AAATTGTTCAAATCATTAAC+GGG | - | chr3_4:41314847-41314866 | Msa0500770:CDS | 20.0% |
| !!! | ATTAGTCATTTTCAATATAC+CGG | + | chr3_4:41315174-41315193 | None:intergenic | 20.0% |
| !! | TGACTAAAGATATCAATTAA+GGG | + | chr3_4:41315482-41315501 | None:intergenic | 20.0% |
| !! | TTGACTAAAGATATCAATTA+AGG | + | chr3_4:41315483-41315502 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | - | chr3_4:41315745-41315764 | Msa0500770:CDS | 20.0% |
| !!! | TTTATCTAAATTCTCTTTTG+TGG | + | chr3_4:41315868-41315887 | None:intergenic | 20.0% |
| !!! | TTTTACTAATTTAACAAGAG+TGG | + | chr3_4:41317159-41317178 | None:intergenic | 20.0% |
| !! | AACATAGTAGAAATATAAGA+TGG | + | chr3_4:41317290-41317309 | None:intergenic | 20.0% |
| !! | AAATAAGATAAGTTTCTTTG+TGG | - | chr3_4:41317318-41317337 | Msa0500770:intron | 20.0% |
| !! | TGTATAAAAATTAACGGTAA+TGG | - | chr3_4:41317365-41317384 | Msa0500770:intron | 20.0% |
| !! | CAAAACAAAACAATGTAATT+TGG | + | chr3_4:41317495-41317514 | None:intergenic | 20.0% |
| !! | GATGAATGATTGATATTAAA+TGG | + | chr3_4:41317555-41317574 | None:intergenic | 20.0% |
| !!! | TTAGTCATTTTTCAACAAAT+GGG | + | chr3_4:41317846-41317865 | None:intergenic | 20.0% |
| !!! | TTTAGTCATTTTTCAACAAA+TGG | + | chr3_4:41317847-41317866 | None:intergenic | 20.0% |
| !!! | GAAATGAAAGTTGATATATT+TGG | + | chr3_4:41318293-41318312 | None:intergenic | 20.0% |
| !!! | TCTAGGGTTAAATATATTTT+TGG | - | chr3_4:41318357-41318376 | Msa0500770:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | + | chr3_4:41318384-41318403 | None:intergenic | 20.0% |
| !!! | TGAAAAGTTGGTATATTTAT+AGG | + | chr3_4:41318385-41318404 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr3_4:41318475-41318494 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr3_4:41318476-41318495 | None:intergenic | 20.0% |
| !!! | ATATGAATTTTTATGTTTGG+TGG | - | chr3_4:41318597-41318616 | Msa0500770:intron | 20.0% |
| !!! | TAGTGGTTGAAAATTTTATA+GGG | - | chr3_4:41318755-41318774 | Msa0500770:intron | 20.0% |
| !!! | AAATGGGTTAAATATCTTTT+TGG | + | chr3_4:41318842-41318861 | None:intergenic | 20.0% |
| !!! | AAGCGTAATTTATCTAAAAT+TGG | - | chr3_4:41319414-41319433 | Msa0500770:intron | 20.0% |
| !!! | AGCGTAATTTATCTAAAATT+GGG | - | chr3_4:41319415-41319434 | Msa0500770:intron | 20.0% |
| !!! | TTTTTTAAACTAAAACGATG+AGG | + | chr3_4:41319443-41319462 | None:intergenic | 20.0% |
| !! | TAGATTTAAATACTACCTAT+AGG | + | chr3_4:41319483-41319502 | None:intergenic | 20.0% |
| !!! | TTTAGAGCCTATATTTTAAT+AGG | - | chr3_4:41319664-41319683 | Msa0500770:intron | 20.0% |
| !! | ACGACATAATATAATATTGA+AGG | - | chr3_4:41320259-41320278 | Msa0500770:intron | 20.0% |
| !! | TATGGAATCAAATATATGTT+TGG | + | chr3_4:41320556-41320575 | None:intergenic | 20.0% |
| !! | ACATATATTTGATTCCATAA+TGG | - | chr3_4:41320557-41320576 | Msa0500770:CDS | 20.0% |
| !! | AAATTATTCAGATCATTAGT+AGG | - | chr3_4:41321001-41321020 | Msa0500770:CDS | 20.0% |
| !!! | ATTGTTTTTATGTCAAATGT+CGG | + | chr3_4:41321118-41321137 | None:intergenic | 20.0% |
| !! | TACTATTTAGTATATATACC+GGG | + | chr3_4:41321327-41321346 | None:intergenic | 20.0% |
| !!! | TGACTAATTAGTTTTGTTTT+TGG | - | chr3_4:41321398-41321417 | Msa0500770:CDS | 20.0% |
| !!! | TTGAATTTTTGTTCATTCTT+GGG | + | chr3_4:41321555-41321574 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGTTCATTCT+TGG | + | chr3_4:41321556-41321575 | None:intergenic | 20.0% |
| !!! | TTTTTCTAAATTCTCTTTTG+TGG | + | chr3_4:41321781-41321800 | None:intergenic | 20.0% |
| !!! | TCTCTATATTAAAGCATTAT+TGG | + | chr3_4:41322056-41322075 | None:intergenic | 20.0% |
| ! | GTTATTCAATGAACTTAATG+TGG | + | chr3_4:41314757-41314776 | None:intergenic | 25.0% |
| ! | CCAATGAGATTATTAGAAAA+CGG | + | chr3_4:41315367-41315386 | None:intergenic | 25.0% |
| !! | CGTTTTCTAATAATCTCATT+GGG | - | chr3_4:41315365-41315384 | Msa0500770:intron | 25.0% |
| !! | TCAAACTTTTGTTCATTCTT+TGG | + | chr3_4:41315401-41315420 | None:intergenic | 25.0% |
| ! | ACAAAAGTTTGATTCAAAAC+TGG | - | chr3_4:41315409-41315428 | Msa0500770:CDS | 25.0% |
| ! | ATTGTCAAGATAATTACCTT+AGG | - | chr3_4:41315555-41315574 | Msa0500770:intron | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | + | chr3_4:41315636-41315655 | None:intergenic | 25.0% |
| ! | TTAGATAAACTTTGCCAAAT+TGG | - | chr3_4:41315879-41315898 | Msa0500770:CDS | 25.0% |
| ! | TCAATAATCTTTCTCCAATT+TGG | + | chr3_4:41315896-41315915 | None:intergenic | 25.0% |
| ! | TCTAAATTAACCTTAGATAC+TGG | + | chr3_4:41315924-41315943 | None:intergenic | 25.0% |
| !! | TCTAAGGTTAATTTAGAGAA+TGG | - | chr3_4:41315927-41315946 | Msa0500770:intron | 25.0% |
| !! | ATAATTTGTGTTGGATTCAA+TGG | - | chr3_4:41316317-41316336 | Msa0500770:intron | 25.0% |
| ! | AAGCAATGGATATAAAGAAA+AGG | - | chr3_4:41316350-41316369 | Msa0500770:intron | 25.0% |
| !! | TTGACAAATAAGTTGGATAA+AGG | + | chr3_4:41316689-41316708 | None:intergenic | 25.0% |
| ! | AATTAAATGCCTAGATATGA+CGG | - | chr3_4:41316727-41316746 | Msa0500770:intron | 25.0% |
| ! | TCCAATTTAGATGCTTAAAT+GGG | - | chr3_4:41316815-41316834 | Msa0500770:intron | 25.0% |
| !!! | TAAATTTTGTTTTAGGTGCT+GGG | + | chr3_4:41316911-41316930 | None:intergenic | 25.0% |
| !!! | TCTCTCTCTTTAATTTTTGT+GGG | + | chr3_4:41317014-41317033 | None:intergenic | 25.0% |
| ! | ACAAAAATTAAAGAGAGAGA+GGG | - | chr3_4:41317014-41317033 | Msa0500770:intron | 25.0% |
| !! | CTTATATTTCTACTATGTTG+AGG | - | chr3_4:41317291-41317310 | Msa0500770:intron | 25.0% |
| ! | GAATAAAATGTAAAAGAGTG+AGG | - | chr3_4:41317464-41317483 | Msa0500770:intron | 25.0% |
| ! | TAAGAACATCTCTTTCTATA+TGG | - | chr3_4:41317889-41317908 | Msa0500770:intron | 25.0% |
| ! | AAGAACATCTCTTTCTATAT+GGG | - | chr3_4:41317890-41317909 | Msa0500770:intron | 25.0% |
| ! | TAGCTAGAATTTACTTCTTA+AGG | - | chr3_4:41318138-41318157 | Msa0500770:intron | 25.0% |
| ! | TTAACCCTAGAAAAATTAGA+GGG | + | chr3_4:41318348-41318367 | None:intergenic | 25.0% |
| ! | TTTAACCCTAGAAAAATTAG+AGG | + | chr3_4:41318349-41318368 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | chr3_4:41318784-41318803 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | chr3_4:41318783-41318802 | None:intergenic | 25.0% |
| !! | AAATTTTCAACCACTACTTT+TGG | + | chr3_4:41318751-41318770 | None:intergenic | 25.0% |
| !! | GTAGTGGTTGAAAATTTTAT+AGG | - | chr3_4:41318754-41318773 | Msa0500770:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | chr3_4:41318783-41318802 | Msa0500770:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | chr3_4:41318784-41318803 | Msa0500770:intron | 25.0% |
| ! | TAGTTATCAGATGTGTATTT+AGG | - | chr3_4:41319034-41319053 | Msa0500770:intron | 25.0% |
| ! | AGTTATCAGATGTGTATTTA+GGG | - | chr3_4:41319035-41319054 | Msa0500770:intron | 25.0% |
| ! | ACAATTGGATATTTCTCTTT+AGG | + | chr3_4:41319079-41319098 | None:intergenic | 25.0% |
| ! | AGAAATATCCAATTGTTGTA+GGG | - | chr3_4:41319083-41319102 | Msa0500770:intron | 25.0% |
| !!! | TTATATGTGTGTTGATTCAT+TGG | + | chr3_4:41319277-41319296 | None:intergenic | 25.0% |
| !! | TAGATAAATTACGCTTGTTA+TGG | + | chr3_4:41319410-41319429 | None:intergenic | 25.0% |
| ! | TAGTTAGAGCTGTTAAAATA+TGG | + | chr3_4:41319755-41319774 | None:intergenic | 25.0% |
| !! | TGATTTCTTTGATGATATTG+TGG | + | chr3_4:41319880-41319899 | None:intergenic | 25.0% |
| ! | TTTGAACCATTTAATGTTGA+TGG | - | chr3_4:41319944-41319963 | Msa0500770:intron | 25.0% |
| ! | TGCTAAAATAGAAAAACACA+GGG | + | chr3_4:41319997-41320016 | None:intergenic | 25.0% |
| ! | ATGCTAAAATAGAAAAACAC+AGG | + | chr3_4:41319998-41320017 | None:intergenic | 25.0% |
| ! | TGATGACTATTTCAACAAAA+AGG | - | chr3_4:41320133-41320152 | Msa0500770:intron | 25.0% |
| !! | TTTAAACTTTTGATCCCTTT+TGG | - | chr3_4:41320169-41320188 | Msa0500770:intron | 25.0% |
| ! | TATTACAAGGTAAACCAAAA+GGG | + | chr3_4:41320186-41320205 | None:intergenic | 25.0% |
| !! | TTACTTCATAAACTTGGTTT+TGG | + | chr3_4:41320209-41320228 | None:intergenic | 25.0% |
| ! | TTCAGTCGAATTGTATTTAT+AGG | + | chr3_4:41320376-41320395 | None:intergenic | 25.0% |
| !!! | TTTGGAATTAAGTTGAAGTT+TGG | + | chr3_4:41320538-41320557 | None:intergenic | 25.0% |
| ! | ATAAATATTTGAACTCATGC+AGG | - | chr3_4:41320957-41320976 | Msa0500770:intron | 25.0% |
| ! | TAAATATTTGAACTCATGCA+GGG | - | chr3_4:41320958-41320977 | Msa0500770:intron | 25.0% |
| ! | ACAAAAATTCAATGCGAAAA+TGG | - | chr3_4:41321563-41321582 | Msa0500770:CDS | 25.0% |
| ! | ATTCACAACATAATTACCTA+CGG | - | chr3_4:41321709-41321728 | Msa0500770:intron | 25.0% |
| ! | TTAGAAAAACTTTGCCAAAT+TGG | - | chr3_4:41321792-41321811 | Msa0500770:CDS | 25.0% |
| ! | TCTAAATTGACCTTAGATAT+TGG | + | chr3_4:41321837-41321856 | None:intergenic | 25.0% |
| !!! | ACATTTGTTTTAATCTTTGC+AGG | - | chr3_4:41321975-41321994 | Msa0500770:CDS | 25.0% |
| AATAGTCACTAAGTTTCCAT+AGG | + | chr3_4:41314428-41314447 | None:intergenic | 30.0% | |
| GATTACTTTGATGTGATTAC+AGG | - | chr3_4:41314553-41314572 | Msa0500770:intron | 30.0% | |
| !! | TTTTGTTGTGGGAAAATCTT+TGG | + | chr3_4:41314685-41314704 | None:intergenic | 30.0% |
| !! | TGTATACGTACTTTTGTTGT+GGG | + | chr3_4:41314696-41314715 | None:intergenic | 30.0% |
| ! | ATGTATACGTACTTTTGTTG+TGG | + | chr3_4:41314697-41314716 | None:intergenic | 30.0% |
| ! | CCGTTTTCTAATAATCTCAT+TGG | - | chr3_4:41315364-41315383 | Msa0500770:intron | 30.0% |
| AGATAATTACCTTAGGATAC+AGG | - | chr3_4:41315562-41315581 | Msa0500770:intron | 30.0% | |
| TTTGTATTACCTGTATCCTA+AGG | + | chr3_4:41315574-41315593 | None:intergenic | 30.0% | |
| TTCATAAATTATACTCCCTC+CGG | - | chr3_4:41315614-41315633 | Msa0500770:CDS | 30.0% | |
| ACGATATGAGAATTGAGAAA+TGG | + | chr3_4:41315793-41315812 | None:intergenic | 30.0% | |
| CTCATATCGTATAAAAATGC+AGG | - | chr3_4:41315803-41315822 | Msa0500770:CDS | 30.0% | |
| ATTGAAGAAACCAGTATCTA+AGG | - | chr3_4:41315911-41315930 | Msa0500770:intron | 30.0% | |
| ATGTTTGAGCCTATTGAAAA+TGG | - | chr3_4:41315951-41315970 | Msa0500770:intron | 30.0% | |
| TGTTTGAGCCTATTGAAAAT+GGG | - | chr3_4:41315952-41315971 | Msa0500770:intron | 30.0% | |
| ! | AGCTCTCAAAAGGTATATTA+TGG | - | chr3_4:41315989-41316008 | Msa0500770:intron | 30.0% |
| ATATCAACATTAATGCATGC+AGG | - | chr3_4:41316108-41316127 | Msa0500770:intron | 30.0% | |
| CAAAAATACTATCACAAGAG+AGG | - | chr3_4:41316135-41316154 | Msa0500770:intron | 30.0% | |
| !! | TTTTGTCCTTAAGCTAGTTT+TGG | - | chr3_4:41316250-41316269 | Msa0500770:intron | 30.0% |
| !!! | TTTGTCCTTAAGCTAGTTTT+GGG | - | chr3_4:41316251-41316270 | Msa0500770:intron | 30.0% |
| ATGGATGTAAAGAAAAGCAA+TGG | - | chr3_4:41316336-41316355 | Msa0500770:intron | 30.0% | |
| ACTTGTCTGGATTTGATAAA+TGG | - | chr3_4:41316500-41316519 | Msa0500770:intron | 30.0% | |
| ! | TTCTCGGAAAATTGTTTCTT+GGG | + | chr3_4:41316647-41316666 | None:intergenic | 30.0% |
| GTTGGATAAAGGAATTTGTA+AGG | + | chr3_4:41316678-41316697 | None:intergenic | 30.0% | |
| GCAAACTTACACAAATTATG+TGG | + | chr3_4:41316755-41316774 | None:intergenic | 30.0% | |
| ! | TATTGTAGATGGTCTTAATG+AGG | + | chr3_4:41316789-41316808 | None:intergenic | 30.0% |
| CTCCAATTTAGATGCTTAAA+TGG | - | chr3_4:41316814-41316833 | Msa0500770:intron | 30.0% | |
| ACCCATTTAAGCATCTAAAT+TGG | + | chr3_4:41316819-41316838 | None:intergenic | 30.0% | |
| !!! | GTAAATTTTGTTTTAGGTGC+TGG | + | chr3_4:41316912-41316931 | None:intergenic | 30.0% |
| CATACGTGATAAATTGTACA+CGG | + | chr3_4:41316990-41317009 | None:intergenic | 30.0% | |
| !! | CTCTCTCTCTTTAATTTTTG+TGG | + | chr3_4:41317015-41317034 | None:intergenic | 30.0% |
| CACAAAAATTAAAGAGAGAG+AGG | - | chr3_4:41317013-41317032 | Msa0500770:intron | 30.0% | |
| ! | AAACATTTTCTCTCCACAAT+GGG | - | chr3_4:41317069-41317088 | Msa0500770:intron | 30.0% |
| ! | CTTTTCTCTTAGACTATGTT+TGG | - | chr3_4:41317423-41317442 | Msa0500770:intron | 30.0% |
| TGTTTGGATTGACATTAAAG+TGG | - | chr3_4:41317439-41317458 | Msa0500770:intron | 30.0% | |
| ATGAATGAAATAGAGTGTGA+TGG | - | chr3_4:41317521-41317540 | Msa0500770:intron | 30.0% | |
| AATTGAGGGGAATTGAAAAT+TGG | + | chr3_4:41317577-41317596 | None:intergenic | 30.0% | |
| ! | TTTTCAATTCCCCTCAATTT+TGG | - | chr3_4:41317578-41317597 | Msa0500770:intron | 30.0% |
| ! | TTTCAATTCCCCTCAATTTT+GGG | - | chr3_4:41317579-41317598 | Msa0500770:intron | 30.0% |
| !! | TTTTGAGGACTAAAAGTTGA+AGG | + | chr3_4:41318429-41318448 | None:intergenic | 30.0% |
| !!! | CGAAGATGGAAATTTTTTTG+AGG | + | chr3_4:41318444-41318463 | None:intergenic | 30.0% |
| ! | AAAATTTCCATCTTCGCTTT+TGG | - | chr3_4:41318448-41318467 | Msa0500770:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | - | chr3_4:41318770-41318789 | Msa0500770:intron | 30.0% | |
| GAGAAATATCCAATTGTTGT+AGG | - | chr3_4:41319082-41319101 | Msa0500770:intron | 30.0% | |
| !! | TTTTGTTATGCGAGCTAAAT+GGG | + | chr3_4:41319173-41319192 | None:intergenic | 30.0% |
| !! | TTTTTGTTATGCGAGCTAAA+TGG | + | chr3_4:41319174-41319193 | None:intergenic | 30.0% |
| ! | GTTTACAATTTTGCTCCTAT+AGG | - | chr3_4:41319465-41319484 | Msa0500770:intron | 30.0% |
| TATTTATGGTTGATCCTAAC+GGG | + | chr3_4:41319721-41319740 | None:intergenic | 30.0% | |
| CTATTTATGGTTGATCCTAA+CGG | + | chr3_4:41319722-41319741 | None:intergenic | 30.0% | |
| AGGATCAACCATAAATAGAT+TGG | - | chr3_4:41319724-41319743 | Msa0500770:intron | 30.0% | |
| TGGAATGTCCAATCTATTTA+TGG | + | chr3_4:41319735-41319754 | None:intergenic | 30.0% | |
| AAATTCCTTGCACTTTGATA+TGG | - | chr3_4:41319910-41319929 | Msa0500770:intron | 30.0% | |
| ATTAAATGGTTCAAATGCAG+GGG | + | chr3_4:41319939-41319958 | None:intergenic | 30.0% | |
| CATTAAATGGTTCAAATGCA+GGG | + | chr3_4:41319940-41319959 | None:intergenic | 30.0% | |
| ACATTAAATGGTTCAAATGC+AGG | + | chr3_4:41319941-41319960 | None:intergenic | 30.0% | |
| CAAAAGCCATCAACATTAAA+TGG | + | chr3_4:41319953-41319972 | None:intergenic | 30.0% | |
| GTATTACAAGGTAAACCAAA+AGG | + | chr3_4:41320187-41320206 | None:intergenic | 30.0% | |
| !!! | AACTTGGTTTTGGTATTACA+AGG | + | chr3_4:41320199-41320218 | None:intergenic | 30.0% |
| TCAGAGTTACTTCATAAACT+TGG | + | chr3_4:41320215-41320234 | None:intergenic | 30.0% | |
| ATTTATGAAAGCAAGCTAGT+AGG | + | chr3_4:41320423-41320442 | None:intergenic | 30.0% | |
| ! | AACCTTCAGCTTTAATTCTT+TGG | - | chr3_4:41320478-41320497 | Msa0500770:intron | 30.0% |
| TTGGTTGTATATGTTTGGTT+AGG | + | chr3_4:41320519-41320538 | None:intergenic | 30.0% | |
| GAAGTTTGGTTGTATATGTT+TGG | + | chr3_4:41320524-41320543 | None:intergenic | 30.0% | |
| GATTACTTTGATGTGATTAC+AGG | - | chr3_4:41314553-41314572 | Msa0500770:intron | 30.0% | |
| ! | GGATATCAAACCATTTTACT+TGG | - | chr3_4:41320845-41320864 | Msa0500770:intron | 30.0% |
| TTAGTAGGACCAAAATATGA+TGG | - | chr3_4:41321016-41321035 | Msa0500770:CDS | 30.0% | |
| TAGTAGGACCAAAATATGAT+GGG | - | chr3_4:41321017-41321036 | Msa0500770:CDS | 30.0% | |
| ! | AGGTATTTCCCATCATATTT+TGG | + | chr3_4:41321028-41321047 | None:intergenic | 30.0% |
| AAATGTCGGAATCACAATAT+TGG | + | chr3_4:41321104-41321123 | None:intergenic | 30.0% | |
| CATGAATTCAACCTTATTGA+CGG | - | chr3_4:41321283-41321302 | Msa0500770:intron | 30.0% | |
| GATGATATTTCAGACTTTAG+TGG | - | chr3_4:41321422-41321441 | Msa0500770:CDS | 30.0% | |
| ATTATATTCCATAGGCTTGA+TGG | + | chr3_4:41321499-41321518 | None:intergenic | 30.0% | |
| AAGAAGCGATTATATTCCAT+AGG | + | chr3_4:41321507-41321526 | None:intergenic | 30.0% | |
| ! | TGACTAAACATGTCGATTAA+GGG | + | chr3_4:41321636-41321655 | None:intergenic | 30.0% |
| ! | TTGACTAAACATGTCGATTA+AGG | + | chr3_4:41321637-41321656 | None:intergenic | 30.0% |
| TCAACAATTTGTCACCAATT+TGG | + | chr3_4:41321809-41321828 | None:intergenic | 30.0% | |
| GTTGAAGAAACCAATATCTA+AGG | - | chr3_4:41321824-41321843 | Msa0500770:CDS | 30.0% | |
| ! | TCTAAGGTCAATTTAGAGAA+TGG | - | chr3_4:41321840-41321859 | Msa0500770:CDS | 30.0% |
| ATGTTTGAGCCAATTGAAAA+TGG | - | chr3_4:41321864-41321883 | Msa0500770:CDS | 30.0% | |
| TGTTTGAGCCAATTGAAAAT+GGG | - | chr3_4:41321865-41321884 | Msa0500770:CDS | 30.0% | |
| ! | TTAAAGCATTATTGGTGTGA+GGG | + | chr3_4:41322048-41322067 | None:intergenic | 30.0% |
| ! | ATTAAAGCATTATTGGTGTG+AGG | + | chr3_4:41322049-41322068 | None:intergenic | 30.0% |
| ATTCTTGAAGTTGCGATTCA+AGG | + | chr3_4:41314507-41314526 | None:intergenic | 35.0% | |
| TCGCAACTTCAAGAATTAGA+CGG | - | chr3_4:41314511-41314530 | Msa0500770:intron | 35.0% | |
| ! | ATCATTTGGAGCACTTAACA+TGG | + | chr3_4:41314605-41314624 | None:intergenic | 35.0% |
| AGTGGACGTTGTTTATCATT+TGG | + | chr3_4:41314619-41314638 | None:intergenic | 35.0% | |
| GGACAATGTTCCAAGTAAAA+GGG | + | chr3_4:41314664-41314683 | None:intergenic | 35.0% | |
| TGGACAATGTTCCAAGTAAA+AGG | + | chr3_4:41314665-41314684 | None:intergenic | 35.0% | |
| ATTAACGGTTGAACTTATGC+AGG | - | chr3_4:41314803-41314822 | Msa0500770:intron | 35.0% | |
| ! | AGGTATTTCCCATCGTATTT+TGG | + | chr3_4:41314874-41314893 | None:intergenic | 35.0% |
| ATGTCTTTATGTCAAACGTG+GGG | + | chr3_4:41314963-41314982 | None:intergenic | 35.0% | |
| GATGTCTTTATGTCAAACGT+GGG | + | chr3_4:41314964-41314983 | None:intergenic | 35.0% | |
| TGATGTCTTTATGTCAAACG+TGG | + | chr3_4:41314965-41314984 | None:intergenic | 35.0% | |
| TTGTAACCAGGAAGATAAGT+AGG | + | chr3_4:41315078-41315097 | None:intergenic | 35.0% | |
| TTCAAGAACCAAGATACAGA+AGG | - | chr3_4:41315099-41315118 | Msa0500770:intron | 35.0% | |
| TCAAGAACCAAGATACAGAA+GGG | - | chr3_4:41315100-41315119 | Msa0500770:intron | 35.0% | |
| TGGTGTTTGTGCAAATAATC+CGG | - | chr3_4:41315152-41315171 | Msa0500770:intron | 35.0% | |
| !! | TTGGTGATGATCAATGTTCT+AGG | - | chr3_4:41315259-41315278 | Msa0500770:CDS | 35.0% |
| AGAAAACGGCTATATTCCAT+GGG | + | chr3_4:41315353-41315372 | None:intergenic | 35.0% | |
| TAGAAAACGGCTATATTCCA+TGG | + | chr3_4:41315354-41315373 | None:intergenic | 35.0% | |
| ATTCAAAACTGGCAGCAAAA+TGG | - | chr3_4:41315420-41315439 | Msa0500770:CDS | 35.0% | |
| TTCAAAACTGGCAGCAAAAT+GGG | - | chr3_4:41315421-41315440 | Msa0500770:CDS | 35.0% | |
| GATATCTTTAGTCAATCCTC+TGG | - | chr3_4:41315488-41315507 | Msa0500770:CDS | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | chr3_4:41315749-41315768 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | chr3_4:41315748-41315767 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | chr3_4:41315748-41315767 | Msa0500770:CDS | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | chr3_4:41315749-41315768 | Msa0500770:CDS | 35.0% |
| TTGCTTATATATACTCCCTC+CGG | + | chr3_4:41315767-41315786 | None:intergenic | 35.0% | |
| ATCAACTGAAGAATCTGTAC+CGG | + | chr3_4:41315841-41315860 | None:intergenic | 35.0% | |
| GTTTGAGCCTATTGAAAATG+GGG | - | chr3_4:41315953-41315972 | Msa0500770:intron | 35.0% | |
| !! | TATACCTTTTGAGAGCTTCT+TGG | + | chr3_4:41315986-41316005 | None:intergenic | 35.0% |
| GTGGATTTGTGTCTATATCA+AGG | + | chr3_4:41316198-41316217 | None:intergenic | 35.0% | |
| AGTATTCATGAACAACGAGT+GGG | + | chr3_4:41316220-41316239 | None:intergenic | 35.0% | |
| ! | TAAGTCCCAAAACTAGCTTA+AGG | + | chr3_4:41316259-41316278 | None:intergenic | 35.0% |
| ! | GTTCTCGGAAAATTGTTTCT+TGG | + | chr3_4:41316648-41316667 | None:intergenic | 35.0% |
| TGGGTAGTTGACAAATAAGT+TGG | + | chr3_4:41316696-41316715 | None:intergenic | 35.0% | |
| !! | TGTTTGGTGCTTATAGAGAA+GGG | + | chr3_4:41317054-41317073 | None:intergenic | 35.0% |
| !! | ATGTTTGGTGCTTATAGAGA+AGG | + | chr3_4:41317055-41317074 | None:intergenic | 35.0% |
| CATTGTGGAGAGAAAATGTT+TGG | + | chr3_4:41317070-41317089 | None:intergenic | 35.0% | |
| ! | CAAACATTTTCTCTCCACAA+TGG | - | chr3_4:41317068-41317087 | Msa0500770:intron | 35.0% |
| ! | AACATTTTCTCTCCACAATG+GGG | - | chr3_4:41317070-41317089 | Msa0500770:intron | 35.0% |
| GTGCTTCATCTATTTAGCAT+CGG | + | chr3_4:41317109-41317128 | None:intergenic | 35.0% | |
| ! | TTTAGAGCATGAACAATGGT+GGG | + | chr3_4:41317131-41317150 | None:intergenic | 35.0% |
| ! | ATTTAGAGCATGAACAATGG+TGG | + | chr3_4:41317132-41317151 | None:intergenic | 35.0% |
| ! | ACCATTGTTCATGCTCTAAA+TGG | - | chr3_4:41317131-41317150 | Msa0500770:intron | 35.0% |
| !!! | ACTTGTTGTGACGTTTTCAT+AGG | + | chr3_4:41317190-41317209 | None:intergenic | 35.0% |
| TGACGCCATTGCTAAATTAT+GGG | + | chr3_4:41317231-41317250 | None:intergenic | 35.0% | |
| TTGACGCCATTGCTAAATTA+TGG | + | chr3_4:41317232-41317251 | None:intergenic | 35.0% | |
| TTGGATTGACATTAAAGTGG+TGG | - | chr3_4:41317442-41317461 | Msa0500770:intron | 35.0% | |
| ! | TTCAATTCCCCTCAATTTTG+GGG | - | chr3_4:41317580-41317599 | Msa0500770:intron | 35.0% |
| TCCATAAACCCCAAAATTGA+GGG | + | chr3_4:41317591-41317610 | None:intergenic | 35.0% | |
| TTCCATAAACCCCAAAATTG+AGG | + | chr3_4:41317592-41317611 | None:intergenic | 35.0% | |
| AAAGTTTGAACCCTGATCAA+GGG | + | chr3_4:41318038-41318057 | None:intergenic | 35.0% | |
| AAAAGTTTGAACCCTGATCA+AGG | + | chr3_4:41318039-41318058 | None:intergenic | 35.0% | |
| ! | TTTTTCCTCAAGTAGTCTAG+TGG | - | chr3_4:41318114-41318133 | Msa0500770:intron | 35.0% |
| ACGATGCACTGTAATATGTA+GGG | + | chr3_4:41318198-41318217 | None:intergenic | 35.0% | |
| ! | TTGCTCCCTCTAATTTTTCT+AGG | - | chr3_4:41318340-41318359 | Msa0500770:intron | 35.0% |
| ! | TGCTCCCTCTAATTTTTCTA+GGG | - | chr3_4:41318341-41318360 | Msa0500770:intron | 35.0% |
| GAGGGACTAAAATGAAAAGT+TGG | + | chr3_4:41318802-41318821 | None:intergenic | 35.0% | |
| AAAATAGGGACCAAAAGTAG+TGG | - | chr3_4:41318738-41318757 | Msa0500770:intron | 35.0% | |
| !!! | AAGTTGCTTTTTTGCCTCAA+TGG | - | chr3_4:41318995-41319014 | Msa0500770:intron | 35.0% |
| TATTGTGTTATGCTCCATTG+AGG | + | chr3_4:41319012-41319031 | None:intergenic | 35.0% | |
| TCTTTAGGCCATATATCTCA+AGG | + | chr3_4:41319064-41319083 | None:intergenic | 35.0% | |
| CTAAAAGACCCTACAACAAT+TGG | + | chr3_4:41319094-41319113 | None:intergenic | 35.0% | |
| TCTAAAAATCAACTCGATCC+CGG | + | chr3_4:41319650-41319669 | None:intergenic | 35.0% | |
| !! | TAACGGGCTTTGAACTTTAA+CGG | + | chr3_4:41319705-41319724 | None:intergenic | 35.0% |
| TTAAATGGTTCAAATGCAGG+GGG | + | chr3_4:41319938-41319957 | None:intergenic | 35.0% | |
| TTTAGATAGCATTGCATACG+AGG | + | chr3_4:41320349-41320368 | None:intergenic | 35.0% | |
| TGCCAAAGAATTAAAGCTGA+AGG | + | chr3_4:41320483-41320502 | None:intergenic | 35.0% | |
| TGATTGTGTTCTGTCCATTA+TGG | + | chr3_4:41320574-41320593 | None:intergenic | 35.0% | |
| TATAGTCACCAAGTTTCCAT+AGG | + | chr3_4:41320622-41320641 | None:intergenic | 35.0% | |
| !! | GTGACTATACTAAGTATCGA+TGG | - | chr3_4:41320633-41320652 | Msa0500770:intron | 35.0% |
| !! | ACTATACTAAGTATCGATGG+TGG | - | chr3_4:41320636-41320655 | Msa0500770:intron | 35.0% |
| ATTCTTGAAGTTGCGATTCA+AGG | + | chr3_4:41314507-41314526 | None:intergenic | 35.0% | |
| TCGCAACTTCAAGAATTAGA+CGG | - | chr3_4:41314511-41314530 | Msa0500770:intron | 35.0% | |
| !! | AGTGGACGCTTTTTATCATT+CGG | + | chr3_4:41320813-41320832 | None:intergenic | 35.0% |
| ATATCCTTAGCAGCAAAAAG+TGG | + | chr3_4:41320831-41320850 | None:intergenic | 35.0% | |
| GATATACGTACTTGTGTTGT+GGG | + | chr3_4:41320890-41320909 | None:intergenic | 35.0% | |
| AGATATACGTACTTGTGTTG+TGG | + | chr3_4:41320891-41320910 | None:intergenic | 35.0% | |
| AATACCTTCATGAAGTGGTA+AGG | - | chr3_4:41321041-41321060 | Msa0500770:CDS | 35.0% | |
| ATACCTTCATGAAGTGGTAA+GGG | - | chr3_4:41321042-41321061 | Msa0500770:CDS | 35.0% | |
| TTCAAGAACCAAGATACAGA+AGG | - | chr3_4:41315099-41315118 | Msa0500770:intron | 35.0% | |
| ! | TCGCTTCTTGATAATATCAC+TGG | - | chr3_4:41321518-41321537 | Msa0500770:intron | 35.0% |
| ! | CGCTTCTTGATAATATCACT+GGG | - | chr3_4:41321519-41321538 | Msa0500770:intron | 35.0% |
| ! | TTGATAATATCACTGGGAAC+TGG | - | chr3_4:41321525-41321544 | Msa0500770:intron | 35.0% |
| TGATAATATCACTGGGAACT+GGG | - | chr3_4:41321526-41321545 | Msa0500770:intron | 35.0% | |
| TAGTCAATCATCAGCTGATA+TGG | - | chr3_4:41321650-41321669 | Msa0500770:intron | 35.0% | |
| ACATAATTACCTACGGATAC+AGG | - | chr3_4:41321716-41321735 | Msa0500770:intron | 35.0% | |
| GATACAGGATGATACATTGA+CGG | - | chr3_4:41321731-41321750 | Msa0500770:intron | 35.0% | |
| ATACAGGATGATACATTGAC+GGG | - | chr3_4:41321732-41321751 | Msa0500770:intron | 35.0% | |
| GTTTGAGCCAATTGAAAATG+GGG | - | chr3_4:41321866-41321885 | Msa0500770:CDS | 35.0% | |
| ! | TTAGTCTCCCCATTTTCAAT+TGG | + | chr3_4:41321876-41321895 | None:intergenic | 35.0% |
| !! | TTTACCTTTTGAGAGCTTCT+TGG | + | chr3_4:41321899-41321918 | None:intergenic | 35.0% |
| !!! | CCTCTCTTGAGAAAGTATTT+TGG | + | chr3_4:41322005-41322024 | None:intergenic | 35.0% |
| CCAAAATACTTTCTCAAGAG+AGG | - | chr3_4:41322002-41322021 | Msa0500770:CDS | 35.0% | |
| AAATACTTTCTCAAGAGAGG+AGG | - | chr3_4:41322005-41322024 | Msa0500770:CDS | 35.0% | |
| ! | TAAAGCATTATTGGTGTGAG+GGG | + | chr3_4:41322047-41322066 | None:intergenic | 35.0% |
| CTAAGAATTTGCAAGCAATG+AGG | + | chr3_4:41322086-41322105 | None:intergenic | 35.0% | |
| GTCACTAAGTTTCCATAGGT+GGG | + | chr3_4:41314424-41314443 | None:intergenic | 40.0% | |
| AGTCACTAAGTTTCCATAGG+TGG | + | chr3_4:41314425-41314444 | None:intergenic | 40.0% | |
| !! | GTGACTATTCTAAGCATCGA+CGG | - | chr3_4:41314439-41314458 | Msa0500770:CDS | 40.0% |
| AAGGAACTCGAGAATAGTTG+CGG | + | chr3_4:41314488-41314507 | None:intergenic | 40.0% | |
| AATTAGACGGTGAATCTGCT+AGG | - | chr3_4:41314524-41314543 | Msa0500770:intron | 40.0% | |
| GTGATTACAGGAACAAGTAC+AGG | - | chr3_4:41314565-41314584 | Msa0500770:intron | 40.0% | |
| ATTACAGGAACAAGTACAGG+TGG | - | chr3_4:41314568-41314587 | Msa0500770:intron | 40.0% | |
| ATATCCTTGGCAGCAAAAAG+TGG | + | chr3_4:41314637-41314656 | None:intergenic | 40.0% | |
| GTAAAAGGGCTTGATATCCT+TGG | + | chr3_4:41314650-41314669 | None:intergenic | 40.0% | |
| ! | GGATATCAAGCCCTTTTACT+TGG | - | chr3_4:41314651-41314670 | Msa0500770:CDS | 40.0% |
| TTAACGGGACCAAAATACGA+TGG | - | chr3_4:41314862-41314881 | Msa0500770:CDS | 40.0% | |
| TAACGGGACCAAAATACGAT+GGG | - | chr3_4:41314863-41314882 | Msa0500770:CDS | 40.0% | |
| AATACCTACACAGTGTGGTT+AGG | - | chr3_4:41314887-41314906 | Msa0500770:CDS | 40.0% | |
| ATACCTACACAGTGTGGTTA+GGG | - | chr3_4:41314888-41314907 | Msa0500770:CDS | 40.0% | |
| AAACGTGGGGATCACAATAT+TGG | + | chr3_4:41314950-41314969 | None:intergenic | 40.0% | |
| TGGTTCTTGAAGTTGTAACC+AGG | + | chr3_4:41315090-41315109 | None:intergenic | 40.0% | |
| ! | CTTTTATGCCATCAAACCCA+TGG | - | chr3_4:41315334-41315353 | Msa0500770:intron | 40.0% |
| GCTATATTCCATGGGTTTGA+TGG | + | chr3_4:41315345-41315364 | None:intergenic | 40.0% | |
| CTAATAATCTCATTGGGCAC+TGG | - | chr3_4:41315371-41315390 | Msa0500770:intron | 40.0% | |
| TCAAAACTGGCAGCAAAATG+GGG | - | chr3_4:41315422-41315441 | Msa0500770:CDS | 40.0% | |
| ! | CAAAATGGGGTCTTTTGGAT+TGG | - | chr3_4:41315435-41315454 | Msa0500770:CDS | 40.0% |
| !!! | CTTTTGGATTGGTTAACCCA+CGG | - | chr3_4:41315446-41315465 | Msa0500770:CDS | 40.0% |
| ! | TAGTCAATCCTCTGGAGATA+TGG | - | chr3_4:41315496-41315515 | Msa0500770:intron | 40.0% |
| GAAATCAACCATATCTCCAG+AGG | + | chr3_4:41315507-41315526 | None:intergenic | 40.0% | |
| CTTGAGTAACAGTAGCAAGA+TGG | + | chr3_4:41315529-41315548 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+CGG | - | chr3_4:41315819-41315838 | Msa0500770:CDS | 40.0% | |
| ! | TTGGTCTCCCCATTTTCAAT+AGG | + | chr3_4:41315963-41315982 | None:intergenic | 40.0% |
| !! | TCAAGGTCTTGTTAGTGTGA+GGG | + | chr3_4:41316181-41316200 | None:intergenic | 40.0% |
| !! | ATCAAGGTCTTGTTAGTGTG+AGG | + | chr3_4:41316182-41316201 | None:intergenic | 40.0% |
| GAGTATTCATGAACAACGAG+TGG | + | chr3_4:41316221-41316240 | None:intergenic | 40.0% | |
| ATCAAATCCAGACAAGTAGC+TGG | + | chr3_4:41316497-41316516 | None:intergenic | 40.0% | |
| TTGTAAGGTCGTGATGTTCT+CGG | + | chr3_4:41316663-41316682 | None:intergenic | 40.0% | |
| TATGTGGAACCGTCATATCT+AGG | + | chr3_4:41316739-41316758 | None:intergenic | 40.0% | |
| ! | TTGGAGTGCTCTATTGTAGA+TGG | + | chr3_4:41316800-41316819 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTAGGTGCTGGGT+TGG | + | chr3_4:41316907-41316926 | None:intergenic | 40.0% |
| ! | ACATTTTCTCTCCACAATGG+GGG | - | chr3_4:41317071-41317090 | Msa0500770:intron | 40.0% |
| ATAAATAAGCACCCCCATTG+TGG | + | chr3_4:41317085-41317104 | None:intergenic | 40.0% | |
| ! | GCCATTTAGAGCATGAACAA+TGG | + | chr3_4:41317135-41317154 | None:intergenic | 40.0% |
| TGTCGCCCATAATTTAGCAA+TGG | - | chr3_4:41317223-41317242 | Msa0500770:intron | 40.0% | |
| ACGTGAGAGAAAAACTTGTG+AGG | + | chr3_4:41317395-41317414 | None:intergenic | 40.0% | |
| CCATAAACCCCAAAATTGAG+GGG | + | chr3_4:41317590-41317609 | None:intergenic | 40.0% | |
| TTGCGTAGAACCATAGATCA+AGG | - | chr3_4:41318003-41318022 | Msa0500770:intron | 40.0% | |
| AGAACCATAGATCAAGGTTG+CGG | - | chr3_4:41318009-41318028 | Msa0500770:intron | 40.0% | |
| CGATGCACTGTAATATGTAG+GGG | + | chr3_4:41318197-41318216 | None:intergenic | 40.0% | |
| GACGATGCACTGTAATATGT+AGG | + | chr3_4:41318199-41318218 | None:intergenic | 40.0% | |
| CTTTGTGAACGCAACTCAAT+TGG | + | chr3_4:41318226-41318245 | None:intergenic | 40.0% | |
| TAGGGAGTCCTTGAGATATA+TGG | - | chr3_4:41319053-41319072 | Msa0500770:intron | 40.0% | |
| !! | AAATGGGTTCCACGCTTTTT+AGG | + | chr3_4:41319123-41319142 | None:intergenic | 40.0% |
| ! | TAAAAAGCGTGGAACCCATT+TGG | - | chr3_4:41319122-41319141 | Msa0500770:intron | 40.0% |
| ! | AAAAAGCGTGGAACCCATTT+GGG | - | chr3_4:41319123-41319142 | Msa0500770:intron | 40.0% |
| TCGTACAGGTTATCCCAAAT+GGG | + | chr3_4:41319139-41319158 | None:intergenic | 40.0% | |
| GTTAAAGTTCAAAGCCCGTT+AGG | - | chr3_4:41319704-41319723 | Msa0500770:intron | 40.0% | |
| AGTAACTCTGAACCAGTCAT+TGG | - | chr3_4:41320224-41320243 | Msa0500770:intron | 40.0% | |
| ATATTATGTCGTCTCTGCCA+TGG | + | chr3_4:41320251-41320270 | None:intergenic | 40.0% | |
| ATTGCATACGAGGAAGAGTA+TGG | + | chr3_4:41320339-41320358 | None:intergenic | 40.0% | |
| !! | TGTTTGGTTAGGTTGATCTC+AGG | + | chr3_4:41320508-41320527 | None:intergenic | 40.0% |
| !! | ATACTAAGTATCGATGGTGG+CGG | - | chr3_4:41320639-41320658 | Msa0500770:intron | 40.0% |
| AATTAGACGGTGAATCTGCT+AGG | - | chr3_4:41314524-41314543 | Msa0500770:intron | 40.0% | |
| GTGATTACAGGAACAAGTAC+AGG | - | chr3_4:41314565-41314584 | Msa0500770:intron | 40.0% | |
| ATTACAGGAACAAGTACAGG+TGG | - | chr3_4:41314568-41314587 | Msa0500770:intron | 40.0% | |
| !! | GGAGAGTGTTCCAAGTAAAA+TGG | + | chr3_4:41320858-41320877 | None:intergenic | 40.0% |
| TTGTGTTGTGGGAAGATCTT+AGG | + | chr3_4:41320879-41320898 | None:intergenic | 40.0% | |
| TGGGAAATACCTTCATGAAG+TGG | - | chr3_4:41321036-41321055 | Msa0500770:CDS | 40.0% | |
| TTGTAGCCTGGAAGATATGT+AGG | + | chr3_4:41321232-41321251 | None:intergenic | 40.0% | |
| TGGTTCTTGAAATTGTAGCC+TGG | + | chr3_4:41321244-41321263 | None:intergenic | 40.0% | |
| GAATTCAACCTTATTGACGG+CGG | - | chr3_4:41321286-41321305 | Msa0500770:intron | 40.0% | |
| ATGCGAAAATGGCAGCAAAA+TGG | - | chr3_4:41321574-41321593 | Msa0500770:CDS | 40.0% | |
| TGCGAAAATGGCAGCAAAAT+GGG | - | chr3_4:41321575-41321594 | Msa0500770:CDS | 40.0% | |
| ! | GGTTGATTTCCATCTTGCTA+CGG | - | chr3_4:41315517-41315536 | Msa0500770:intron | 40.0% |
| ATGTATCATCCTGTATCCGT+AGG | + | chr3_4:41321728-41321747 | None:intergenic | 40.0% | |
| CTAACCAAGAAGCTCTCAAA+AGG | - | chr3_4:41321892-41321911 | Msa0500770:intron | 40.0% | |
| ACTAAGTTTCCATAGGTGGG+AGG | + | chr3_4:41314421-41314440 | None:intergenic | 45.0% | |
| !! | ACTATTCTAAGCATCGACGG+TGG | - | chr3_4:41314442-41314461 | Msa0500770:CDS | 45.0% |
| AGGAACTCGAGAATAGTTGC+GGG | + | chr3_4:41314487-41314506 | None:intergenic | 45.0% | |
| TGTGGCTGCATAAGTGCAAT+TGG | + | chr3_4:41314739-41314758 | None:intergenic | 45.0% | |
| AACTTATGCAGGCACTTGCT+GGG | - | chr3_4:41314814-41314833 | Msa0500770:intron | 45.0% | |
| TGGGAAATACCTACACAGTG+TGG | - | chr3_4:41314882-41314901 | Msa0500770:CDS | 45.0% | |
| AAGATAAGTAGGAGCAGCAG+AGG | + | chr3_4:41315067-41315086 | None:intergenic | 45.0% | |
| GTACAGTCCCTTCTGTATCT+TGG | + | chr3_4:41315110-41315129 | None:intergenic | 45.0% | |
| CGTGAGTTCAACCTCATTGA+TGG | - | chr3_4:41315129-41315148 | Msa0500770:intron | 45.0% | |
| GAGTTCAACCTCATTGATGG+TGG | - | chr3_4:41315132-41315151 | Msa0500770:intron | 45.0% | |
| CACAAACACCACCATCAATG+AGG | + | chr3_4:41315143-41315162 | None:intergenic | 45.0% | |
| !! | CCTTTTGAGAGCTTCTTGGT+TGG | + | chr3_4:41315982-41316001 | None:intergenic | 45.0% |
| CCAACCAAGAAGCTCTCAAA+AGG | - | chr3_4:41315979-41315998 | Msa0500770:intron | 45.0% | |
| !! | CAAGGTCTTGTTAGTGTGAG+GGG | + | chr3_4:41316180-41316199 | None:intergenic | 45.0% |
| ATTCATGAACAACGAGTGGG+TGG | + | chr3_4:41316217-41316236 | None:intergenic | 45.0% | |
| CTCTAAACCAGCTACTTGTC+TGG | - | chr3_4:41316487-41316506 | Msa0500770:intron | 45.0% | |
| ! | TTGGTGCTTATAGAGAAGGG+TGG | + | chr3_4:41317051-41317070 | None:intergenic | 45.0% |
| !!! | CCCCTCAATTTTGGGGTTTA+TGG | - | chr3_4:41317587-41317606 | Msa0500770:intron | 45.0% |
| GATCTGGCCTCACAATATCA+CGG | - | chr3_4:41317715-41317734 | Msa0500770:intron | 45.0% | |
| TTTGCCTCCGTGATATTGTG+AGG | + | chr3_4:41317725-41317744 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | - | chr3_4:41317937-41317956 | Msa0500770:intron | 45.0% | |
| !!! | AGCACGTTGCGCTCTTTTTT+TGG | - | chr3_4:41317967-41317986 | Msa0500770:intron | 45.0% |
| GTTTCCGCAACCTTGATCTA+TGG | + | chr3_4:41318016-41318035 | None:intergenic | 45.0% | |
| GGTAAATAACCGAGAATCCG+AGG | - | chr3_4:41318159-41318178 | Msa0500770:intron | 45.0% | |
| ATGTTCGAACCTCGGATTCT+CGG | + | chr3_4:41318171-41318190 | None:intergenic | 45.0% | |
| TGTGAACGCAACTCAATTGG+TGG | + | chr3_4:41318223-41318242 | None:intergenic | 45.0% | |
| !!! | GTTCCACGCTTTTTAGGACT+GGG | + | chr3_4:41319117-41319136 | None:intergenic | 45.0% |
| CTCGTACAGGTTATCCCAAA+TGG | + | chr3_4:41319140-41319159 | None:intergenic | 45.0% | |
| ! | ATACGAGGAAGAGTATGGCA+TGG | + | chr3_4:41320334-41320353 | None:intergenic | 45.0% |
| TAGGATGTAGCTGGTGTGTT+TGG | + | chr3_4:41320404-41320423 | None:intergenic | 45.0% | |
| GTCACCAAGTTTCCATAGGT+GGG | + | chr3_4:41320618-41320637 | None:intergenic | 45.0% | |
| AGTCACCAAGTTTCCATAGG+TGG | + | chr3_4:41320619-41320638 | None:intergenic | 45.0% | |
| ! | AACTCATGCAGGGACTTGTT+GGG | - | chr3_4:41320968-41320987 | Msa0500770:intron | 45.0% |
| TCTCCCTTACCACTTCATGA+AGG | + | chr3_4:41321048-41321067 | None:intergenic | 45.0% | |
| TGAAGTGGTAAGGGAGAAGT+TGG | - | chr3_4:41321051-41321070 | Msa0500770:CDS | 45.0% | |
| GAAGTGGTAAGGGAGAAGTT+GGG | - | chr3_4:41321052-41321071 | Msa0500770:CDS | 45.0% | |
| AAGTGGTAAGGGAGAAGTTG+GGG | - | chr3_4:41321053-41321072 | Msa0500770:CDS | 45.0% | |
| GATCAAGAAAACCCCTTGCA+TGG | - | chr3_4:41321165-41321184 | Msa0500770:CDS | 45.0% | |
| AAGATATGTAGGTGCAGCAG+AGG | + | chr3_4:41321221-41321240 | None:intergenic | 45.0% | |
| GTGTGTTGCCTTCTGTATCT+TGG | + | chr3_4:41321264-41321283 | None:intergenic | 45.0% | |
| CGGTGTTTGTGCAAATAACC+CGG | - | chr3_4:41321306-41321325 | Msa0500770:intron | 45.0% | |
| CTTCTATGCCATCAAGCCTA+TGG | - | chr3_4:41321488-41321507 | Msa0500770:intron | 45.0% | |
| GCGAAAATGGCAGCAAAATG+GGG | - | chr3_4:41321576-41321595 | Msa0500770:CDS | 45.0% | |
| !! | CTGCTGGATTGGTTAACTCA+CGG | - | chr3_4:41321600-41321619 | Msa0500770:CDS | 45.0% |
| TGTGAGGGGATTTCAACTCT+CGG | + | chr3_4:41322033-41322052 | None:intergenic | 45.0% | |
| !!! | ATAAATATAATTTGTATTAA+CGG | - | chr3_4:41314788-41314807 | Msa0500770:intron | 5.0% |
| !! | TTTATTAATAATGAATTAAT+AGG | + | chr3_4:41316389-41316408 | None:intergenic | 5.0% |
| !!! | TATATTTTTTTTTGTAATTT+TGG | + | chr3_4:41317816-41317835 | None:intergenic | 5.0% |
| !!! | AAAATTTTTAATAGAAAAAT+GGG | + | chr3_4:41318858-41318877 | None:intergenic | 5.0% |
| !!! | TAAAATTTTTAATAGAAAAA+TGG | + | chr3_4:41318859-41318878 | None:intergenic | 5.0% |
| CAAATTCAGCCTCCCACCTA+TGG | - | chr3_4:41314409-41314428 | Msa0500770:exon | 50.0% | |
| !! | ATTCTAAGCATCGACGGTGG+TGG | - | chr3_4:41314445-41314464 | Msa0500770:CDS | 50.0% |
| ! | CATCGACGGTGGTGGTATTA+GGG | - | chr3_4:41314453-41314472 | Msa0500770:CDS | 50.0% |
| ! | ATCGACGGTGGTGGTATTAG+GGG | - | chr3_4:41314454-41314473 | Msa0500770:CDS | 50.0% |
| !!! | ACGTCCACTTTTTGCTGCCA+AGG | - | chr3_4:41314630-41314649 | Msa0500770:CDS | 50.0% |
| GAACTTATGCAGGCACTTGC+TGG | - | chr3_4:41314813-41314832 | Msa0500770:intron | 50.0% | |
| TCTCCCTAACCACACTGTGT+AGG | + | chr3_4:41314894-41314913 | None:intergenic | 50.0% | |
| AGTGTGGTTAGGGAGAAGCT+TGG | - | chr3_4:41314898-41314917 | Msa0500770:CDS | 50.0% | |
| GTGTGGTTAGGGAGAAGCTT+GGG | - | chr3_4:41314899-41314918 | Msa0500770:CDS | 50.0% | |
| TGTGGTTAGGGAGAAGCTTG+GGG | - | chr3_4:41314900-41314919 | Msa0500770:CDS | 50.0% | |
| GATCAAGAAAGCCCCTTGCA+TGG | - | chr3_4:41315011-41315030 | Msa0500770:CDS | 50.0% | |
| AGAGTCGAGCATCCATGCAA+GGG | + | chr3_4:41315026-41315045 | None:intergenic | 50.0% | |
| TTGCATGGATGCTCGACTCT+CGG | - | chr3_4:41315026-41315045 | Msa0500770:CDS | 50.0% | |
| GCTGCTCCTACTTATCTTCC+TGG | - | chr3_4:41315069-41315088 | Msa0500770:intron | 50.0% | |
| ! | GGCAGCAAAATGGGGTCTTT+TGG | - | chr3_4:41315430-41315449 | Msa0500770:CDS | 50.0% |
| !! | TTGGATTGGTTAACCCACGG+TGG | - | chr3_4:41315449-41315468 | Msa0500770:CDS | 50.0% |
| TAAGGGAGTTGAACCACCGT+GGG | + | chr3_4:41315465-41315484 | None:intergenic | 50.0% | |
| TTAAGGGAGTTGAACCACCG+TGG | + | chr3_4:41315466-41315485 | None:intergenic | 50.0% | |
| CTGAAACAGCGGAGTAAAGG+GGG | + | chr3_4:41317690-41317709 | None:intergenic | 50.0% | |
| CCTGAAACAGCGGAGTAAAG+GGG | + | chr3_4:41317691-41317710 | None:intergenic | 50.0% | |
| CCCTGAAACAGCGGAGTAAA+GGG | + | chr3_4:41317692-41317711 | None:intergenic | 50.0% | |
| ! | CCCTTTACTCCGCTGTTTCA+GGG | - | chr3_4:41317689-41317708 | Msa0500770:intron | 50.0% |
| ! | CCTTTACTCCGCTGTTTCAG+GGG | - | chr3_4:41317690-41317709 | Msa0500770:intron | 50.0% |
| ATGATACCCGTGCATACGGA+CGG | - | chr3_4:41317941-41317960 | Msa0500770:intron | 50.0% | |
| GTTGCGGAAACCCTTGATCA+GGG | - | chr3_4:41318025-41318044 | Msa0500770:intron | 50.0% | |
| GCTAGCCACTAGACTACTTG+AGG | + | chr3_4:41318122-41318141 | None:intergenic | 50.0% | |
| AGAGGGACCAAAAGCGAAGA+TGG | + | chr3_4:41318458-41318477 | None:intergenic | 50.0% | |
| TAGCCCAGTCCTAAAAAGCG+TGG | - | chr3_4:41319111-41319130 | Msa0500770:intron | 50.0% | |
| !!! | GGTTCCACGCTTTTTAGGAC+TGG | + | chr3_4:41319118-41319137 | None:intergenic | 50.0% |
| TTTAGCCCACGACCCGTATA+AGG | - | chr3_4:41319624-41319643 | Msa0500770:intron | 50.0% | |
| ! | AACTCGATCCCGGCCTTATA+CGG | + | chr3_4:41319640-41319659 | None:intergenic | 50.0% |
| GGGCTCCATATCAAAGTGCA+AGG | + | chr3_4:41319918-41319937 | None:intergenic | 50.0% | |
| CTGAACCAGTCATTGGACCA+TGG | - | chr3_4:41320231-41320250 | Msa0500770:intron | 50.0% | |
| CGCGCATCTTTGACGAAAGT+TGG | - | chr3_4:41320286-41320305 | Msa0500770:intron | 50.0% | |
| GCAAGCTAGTAGGATGTAGC+TGG | + | chr3_4:41320413-41320432 | None:intergenic | 50.0% | |
| ACCAAGTTTCCATAGGTGGG+AGG | + | chr3_4:41320615-41320634 | None:intergenic | 50.0% | |
| !! | TATCGATGGTGGCGGCATTA+GGG | - | chr3_4:41320647-41320666 | Msa0500770:intron | 50.0% |
| AGGAACTCGAGGATAGTTGC+AGG | + | chr3_4:41320681-41320700 | None:intergenic | 50.0% | |
| GTTGCGATTCAAGGAACTCG+AGG | + | chr3_4:41314498-41314517 | None:intergenic | 50.0% | |
| !!! | GCGTCCACTTTTTGCTGCTA+AGG | - | chr3_4:41320824-41320843 | Msa0500770:intron | 50.0% |
| GAACTCATGCAGGGACTTGT+TGG | - | chr3_4:41320967-41320986 | Msa0500770:intron | 50.0% | |
| !! | AGGGACTTGTTGGGATCAGT+GGG | - | chr3_4:41320977-41320996 | Msa0500770:CDS | 50.0% |
| AGTGGTAAGGGAGAAGTTGG+GGG | - | chr3_4:41321054-41321073 | Msa0500770:CDS | 50.0% | |
| AGAGTCGAGCATCCATGCAA+GGG | + | chr3_4:41315026-41315045 | None:intergenic | 50.0% | |
| TTGCATGGATGCTCGACTCT+CGG | - | chr3_4:41315026-41315045 | Msa0500770:CDS | 50.0% | |
| GCTGCACCTACATATCTTCC+AGG | - | chr3_4:41321223-41321242 | Msa0500770:intron | 50.0% | |
| CACAAACACCGCCGTCAATA+AGG | + | chr3_4:41321297-41321316 | None:intergenic | 50.0% | |
| CAAAATGGGGTCTGCTGGAT+TGG | - | chr3_4:41321589-41321608 | Msa0500770:CDS | 50.0% | |
| !! | CTGGATTGGTTAACTCACGG+TGG | - | chr3_4:41321603-41321622 | Msa0500770:CDS | 50.0% |
| CTCGAGTAACCGTAGCAAGA+TGG | + | chr3_4:41321683-41321702 | None:intergenic | 50.0% | |
| ! | GCATCGACGGTGGTGGTATT+AGG | - | chr3_4:41314452-41314471 | Msa0500770:CDS | 55.0% |
| GAGTCGAGCATCCATGCAAG+GGG | + | chr3_4:41315025-41315044 | None:intergenic | 55.0% | |
| GAGAGTCGAGCATCCATGCA+AGG | + | chr3_4:41315027-41315046 | None:intergenic | 55.0% | |
| ! | GGTGCTGGGTTGGAGAGATT+GGG | + | chr3_4:41316897-41316916 | None:intergenic | 55.0% |
| !! | AGGTGCTGGGTTGGAGAGAT+TGG | + | chr3_4:41316898-41316917 | None:intergenic | 55.0% |
| ! | CCCCTTTACTCCGCTGTTTC+AGG | - | chr3_4:41317688-41317707 | Msa0500770:intron | 55.0% |
| CCCCTGAAACAGCGGAGTAA+AGG | + | chr3_4:41317693-41317712 | None:intergenic | 55.0% | |
| CAGATCTGCCCCTGAAACAG+CGG | + | chr3_4:41317701-41317720 | None:intergenic | 55.0% | |
| CTGGCCTCACAATATCACGG+AGG | - | chr3_4:41317718-41317737 | Msa0500770:intron | 55.0% | |
| TGATACCCGTGCATACGGAC+GGG | - | chr3_4:41317942-41317961 | Msa0500770:intron | 55.0% | |
| GGTTGCGGAAACCCTTGATC+AGG | - | chr3_4:41318024-41318043 | Msa0500770:intron | 55.0% | |
| AGGGGTCGATGTTCGAACCT+CGG | + | chr3_4:41318179-41318198 | None:intergenic | 55.0% | |
| GGGATAACCTGTACGAGCCA+CGG | - | chr3_4:41319143-41319162 | Msa0500770:intron | 55.0% | |
| GGATAACCTGTACGAGCCAC+GGG | - | chr3_4:41319144-41319163 | Msa0500770:intron | 55.0% | |
| ! | ACTCGATCCCGGCCTTATAC+GGG | + | chr3_4:41319639-41319658 | None:intergenic | 55.0% |
| CTCTGCCATGGTCCAATGAC+TGG | + | chr3_4:41320239-41320258 | None:intergenic | 55.0% | |
| CAGATTCAGCCTCCCACCTA+TGG | - | chr3_4:41320603-41320622 | Msa0500770:intron | 55.0% | |
| GCCTCCCACCTATGGAAACT+TGG | - | chr3_4:41314417-41314436 | Msa0500770:exon | 55.0% | |
| !! | GTATCGATGGTGGCGGCATT+AGG | - | chr3_4:41320646-41320665 | Msa0500770:intron | 55.0% |
| !! | ATCGATGGTGGCGGCATTAG+GGG | - | chr3_4:41320648-41320667 | Msa0500770:intron | 55.0% |
| !! | CAGGGACTTGTTGGGATCAG+TGG | - | chr3_4:41320976-41320995 | Msa0500770:CDS | 55.0% |
| !! | GGGACTTGTTGGGATCAGTG+GGG | - | chr3_4:41320978-41320997 | Msa0500770:CDS | 55.0% |
| GAGTCGAGCATCCATGCAAG+GGG | + | chr3_4:41315025-41315044 | None:intergenic | 55.0% | |
| GAGAGTCGAGCATCCATGCA+AGG | + | chr3_4:41315027-41315046 | None:intergenic | 55.0% | |
| ! | ATGCAGGCACTTGCTGGGAC+TGG | - | chr3_4:41314819-41314838 | Msa0500770:intron | 60.0% |
| ! | AGGCACTTGCTGGGACTGGT+GGG | - | chr3_4:41314823-41314842 | Msa0500770:CDS | 60.0% |
| ! | CGCTGTTTCAGGGGCAGATC+TGG | - | chr3_4:41317699-41317718 | Msa0500770:intron | 60.0% |
| TGCTCACCCGTCCGTATGCA+CGG | + | chr3_4:41317951-41317970 | None:intergenic | 60.0% | |
| !! | CGAGCTAAATGGGCTACCCG+TGG | + | chr3_4:41319163-41319182 | None:intergenic | 60.0% |
| GGCAGCAAAATGGGGTCTGC+TGG | - | chr3_4:41321584-41321603 | Msa0500770:CDS | 60.0% | |
| ! | CAGGCACTTGCTGGGACTGG+TGG | - | chr3_4:41314822-41314841 | Msa0500770:CDS | 65.0% |
| ! | GGCACTTGCTGGGACTGGTG+GGG | - | chr3_4:41314824-41314843 | Msa0500770:CDS | 65.0% |
| GCTCACCCGTCCGTATGCAC+GGG | + | chr3_4:41317950-41317969 | None:intergenic | 65.0% | |
| GCCCACGACCCGTATAAGGC+CGG | - | chr3_4:41319628-41319647 | Msa0500770:intron | 65.0% | |
| ! | CCCGGCCTTATACGGGTCGT+GGG | + | chr3_4:41319632-41319651 | None:intergenic | 65.0% |
| CCCACGACCCGTATAAGGCC+GGG | - | chr3_4:41319629-41319648 | Msa0500770:intron | 65.0% | |
| ! | TCCCGGCCTTATACGGGTCG+TGG | + | chr3_4:41319633-41319652 | None:intergenic | 65.0% |
| GGGCTACCCGTGGCTCGTAC+AGG | + | chr3_4:41319153-41319172 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 41314382 | 41322110 | 41314382 | ID=Msa0500770;Name=Msa0500770 |
| chr3_4 | mRNA | 41314382 | 41322110 | 41314382 | ID=Msa0500770-mRNA-1;Parent=Msa0500770;Name=Msa0500770-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.16|0.07|1|0.41|0.07|13|38|686 |
| chr3_4 | exon | 41314382 | 41314495 | 41314382 | ID=Msa0500770-mRNA-1:exon:8644;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41314579 | 41314754 | 41314579 | ID=Msa0500770-mRNA-1:exon:8643;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41314821 | 41315057 | 41314821 | ID=Msa0500770-mRNA-1:exon:8642;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41315165 | 41315326 | 41315165 | ID=Msa0500770-mRNA-1:exon:8641;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41315384 | 41315513 | 41315384 | ID=Msa0500770-mRNA-1:exon:8640;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41315594 | 41315711 | 41315594 | ID=Msa0500770-mRNA-1:exon:8639;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41315718 | 41315908 | 41315718 | ID=Msa0500770-mRNA-1:exon:8638;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41320492 | 41320616 | 41320492 | ID=Msa0500770-mRNA-1:exon:8637;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41320975 | 41321211 | 41320975 | ID=Msa0500770-mRNA-1:exon:8636;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41321319 | 41321480 | 41321319 | ID=Msa0500770-mRNA-1:exon:8635;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41321538 | 41321667 | 41321538 | ID=Msa0500770-mRNA-1:exon:8634;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41321788 | 41321905 | 41321788 | ID=Msa0500770-mRNA-1:exon:8633;Parent=Msa0500770-mRNA-1 |
| chr3_4 | exon | 41321912 | 41322110 | 41321912 | ID=Msa0500770-mRNA-1:exon:8632;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41321912 | 41322110 | 41321912 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41321788 | 41321905 | 41321788 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41321538 | 41321667 | 41321538 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41321319 | 41321480 | 41321319 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41320975 | 41321211 | 41320975 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41320492 | 41320616 | 41320492 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41315718 | 41315908 | 41315718 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41315594 | 41315711 | 41315594 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41315384 | 41315513 | 41315384 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41315165 | 41315326 | 41315165 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41314821 | 41315057 | 41314821 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41314579 | 41314754 | 41314579 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | CDS | 41314420 | 41314495 | 41314420 | ID=Msa0500770-mRNA-1:cds;Parent=Msa0500770-mRNA-1 |
| chr3_4 | three_prime_UTR | 41314382 | 41314419 | 41314382 | ID=Msa0500770-mRNA-1:three_prime_utr;Parent=Msa0500770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
