Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399930 | QCE16550.1 | 67.089 | 790 | 155 | 8 | 1 | 685 | 1 | 790 | 0.0 | 1003 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399930 | sp|O48723|PLP2_ARATH | 55.725 | 393 | 130 | 4 | 332 | 681 | 10 | 401 | 2.98e-143 | 427 |
| Msa1399930 | sp|O48723|PLP2_ARATH | 53.763 | 372 | 111 | 4 | 11 | 322 | 10 | 380 | 1.03e-124 | 379 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399930 | A0A4D6NRM1 | 67.089 | 790 | 155 | 8 | 1 | 685 | 1 | 790 | 0.0 | 1003 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0026420 | Msa1399930 | 0.847430 | 1.162305e-59 | -8.615850e-47 |
| Msa0051480 | Msa1399930 | 0.845091 | 5.039610e-59 | -8.615850e-47 |
| Msa0051620 | Msa1399930 | 0.836925 | 7.032082e-57 | -8.615850e-47 |
| Msa0051730 | Msa1399930 | 0.837033 | 6.596987e-57 | -8.615850e-47 |
| Msa0086360 | Msa1399930 | 0.804087 | 2.556345e-49 | -8.615850e-47 |
| Msa0089890 | Msa1399930 | 0.810317 | 1.223928e-50 | -8.615850e-47 |
| Msa1349830 | Msa1399930 | 0.819158 | 1.345318e-52 | -8.615850e-47 |
| Msa1369450 | Msa1399930 | 0.807083 | 6.010264e-50 | -8.615850e-47 |
| Msa1377050 | Msa1399930 | 0.838234 | 3.245224e-57 | -8.615850e-47 |
| Msa1399930 | Msa1422230 | 0.815270 | 1.007391e-51 | -8.615850e-47 |
| Msa1399930 | Msa1427000 | 0.823510 | 1.332664e-53 | -8.615850e-47 |
| Msa1399930 | Msa1435320 | 0.831846 | 1.323985e-55 | -8.615850e-47 |
| Msa1399930 | Msa1438160 | 0.800658 | 1.299824e-48 | -8.615850e-47 |
| Msa1399930 | Msa1439780 | 0.825941 | 3.561730e-54 | -8.615850e-47 |
| Msa1399930 | Msa1443400 | 0.832106 | 1.141972e-55 | -8.615850e-47 |
| Msa1399930 | Msa1448040 | 0.831461 | 1.647822e-55 | -8.615850e-47 |
| Msa1399930 | Msa1453600 | 0.802561 | 5.291836e-49 | -8.615850e-47 |
| Msa0704560 | Msa1399930 | 0.825668 | 4.134240e-54 | -8.615850e-47 |
| Msa0740630 | Msa1399930 | 0.853996 | 1.651622e-61 | -8.615850e-47 |
| Msa0744560 | Msa1399930 | 0.806141 | 9.498603e-50 | -8.615850e-47 |
| Msa0746340 | Msa1399930 | 0.849058 | 4.125479e-60 | -8.615850e-47 |
| Msa0781210 | Msa1399930 | 0.806858 | 6.705225e-50 | -8.615850e-47 |
| Msa0795320 | Msa1399930 | 0.805532 | 1.275846e-49 | -8.615850e-47 |
| Msa0820880 | Msa1399930 | 0.857473 | 1.593600e-62 | -8.615850e-47 |
| Msa0832950 | Msa1399930 | 0.806191 | 9.271562e-50 | -8.615850e-47 |
| Msa0136240 | Msa1399930 | 0.806978 | 6.324806e-50 | -8.615850e-47 |
| Msa0143640 | Msa1399930 | 0.813201 | 2.885415e-51 | -8.615850e-47 |
| Msa0146090 | Msa1399930 | 0.813726 | 2.212560e-51 | -8.615850e-47 |
| Msa0146200 | Msa1399930 | 0.848009 | 8.054769e-60 | -8.615850e-47 |
| Msa0162680 | Msa1399930 | 0.842245 | 2.908945e-58 | -8.615850e-47 |
| Msa1299480 | Msa1399930 | 0.812259 | 4.639289e-51 | -8.615850e-47 |
| Msa1307930 | Msa1399930 | 0.802494 | 5.462656e-49 | -8.615850e-47 |
| Msa1333700 | Msa1399930 | 0.828526 | 8.561761e-55 | -8.615850e-47 |
| Msa0393100 | Msa1399930 | 0.818969 | 1.484832e-52 | -8.615850e-47 |
| Msa0402800 | Msa1399930 | 0.806404 | 8.361240e-50 | -8.615850e-47 |
| Msa0429900 | Msa1399930 | 0.924093 | 1.116256e-89 | -8.615850e-47 |
| Msa0429910 | Msa1399930 | 0.860411 | 2.105011e-63 | -8.615850e-47 |
| Msa0438070 | Msa1399930 | 0.843710 | 1.185281e-58 | -8.615850e-47 |
| Msa0480550 | Msa1399930 | 0.808970 | 2.383522e-50 | -8.615850e-47 |
| Msa1025750 | Msa1399930 | 0.810000 | 1.432705e-50 | -8.615850e-47 |
| Msa1027910 | Msa1399930 | 0.837060 | 6.493380e-57 | -8.615850e-47 |
| Msa1030210 | Msa1399930 | 0.823912 | 1.072814e-53 | -8.615850e-47 |
| Msa1069250 | Msa1399930 | 0.822926 | 1.823435e-53 | -8.615850e-47 |
| Msa1084890 | Msa1399930 | 0.828486 | 8.754901e-55 | -8.615850e-47 |
| Msa0302510 | Msa1399930 | 0.804477 | 2.120364e-49 | -8.615850e-47 |
| Msa0306310 | Msa1399930 | 0.841259 | 5.297608e-58 | -8.615850e-47 |
| Msa0345980 | Msa1399930 | 0.817367 | 3.420978e-52 | -8.615850e-47 |
| Msa1120580 | Msa1399930 | 0.824778 | 6.713738e-54 | -8.615850e-47 |
| Msa1157110 | Msa1399930 | 0.818782 | 1.637475e-52 | -8.615850e-47 |
| Msa1184400 | Msa1399930 | 0.829874 | 4.033119e-55 | -8.615850e-47 |
| Msa1211610 | Msa1399930 | 0.809468 | 1.864737e-50 | -8.615850e-47 |
| Msa1224510 | Msa1399930 | 0.842796 | 2.077683e-58 | -8.615850e-47 |
| Msa0500770 | Msa1399930 | 0.971767 | 1.100956e-133 | -8.615850e-47 |
| Msa0580840 | Msa1399930 | 0.818971 | 1.483730e-52 | -8.615850e-47 |
| Msa0585060 | Msa1399930 | 0.816200 | 6.250361e-52 | -8.615850e-47 |
| Msa0859040 | Msa1399930 | 0.833587 | 4.894191e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399930 | MtrunA17_Chr3g0133691 | 86.064 | 409 | 13 | 4 | 322 | 686 | 1 | 409 | 0.0 | 699 |
| Msa1399930 | MtrunA17_Chr3g0133691 | 75.959 | 391 | 34 | 3 | 1 | 331 | 1 | 391 | 0.0 | 588 |
| Msa1399930 | MtrunA17_Chr3g0133681 | 82.108 | 408 | 30 | 3 | 322 | 686 | 1 | 408 | 0.0 | 648 |
| Msa1399930 | MtrunA17_Chr3g0133681 | 81.330 | 391 | 13 | 3 | 1 | 331 | 1 | 391 | 0.0 | 599 |
| Msa1399930 | MtrunA17_Chr1g0153781 | 69.975 | 403 | 76 | 5 | 325 | 682 | 5 | 407 | 0.0 | 565 |
| Msa1399930 | MtrunA17_Chr1g0153781 | 64.872 | 390 | 75 | 5 | 4 | 331 | 5 | 394 | 4.90e-171 | 495 |
| Msa1399930 | MtrunA17_Chr5g0402441 | 48.241 | 398 | 155 | 7 | 325 | 677 | 3 | 394 | 3.78e-118 | 359 |
| Msa1399930 | MtrunA17_Chr5g0402441 | 45.269 | 391 | 146 | 7 | 4 | 332 | 3 | 387 | 1.16e-103 | 322 |
| Msa1399930 | MtrunA17_Chr5g0402451 | 48.825 | 383 | 149 | 6 | 339 | 675 | 8 | 389 | 2.70e-117 | 357 |
| Msa1399930 | MtrunA17_Chr5g0402451 | 45.119 | 379 | 144 | 6 | 18 | 333 | 8 | 385 | 3.66e-102 | 318 |
| Msa1399930 | MtrunA17_Chr8g0335581 | 41.582 | 392 | 165 | 14 | 331 | 674 | 11 | 386 | 1.27e-75 | 249 |
| Msa1399930 | MtrunA17_Chr8g0335581 | 40.642 | 374 | 151 | 13 | 10 | 323 | 11 | 373 | 4.56e-66 | 223 |
| Msa1399930 | MtrunA17_Chr8g0335621 | 38.931 | 393 | 174 | 13 | 331 | 674 | 53 | 428 | 1.32e-69 | 234 |
| Msa1399930 | MtrunA17_Chr8g0335621 | 37.337 | 383 | 167 | 12 | 10 | 331 | 53 | 423 | 5.36e-60 | 208 |
| Msa1399930 | MtrunA17_Chr8g0335611 | 38.677 | 393 | 175 | 13 | 331 | 674 | 22 | 397 | 2.71e-69 | 232 |
| Msa1399930 | MtrunA17_Chr8g0335611 | 37.598 | 383 | 166 | 12 | 10 | 331 | 22 | 392 | 7.12e-61 | 210 |
| Msa1399930 | MtrunA17_Chr8g0335651 | 41.710 | 386 | 158 | 10 | 331 | 674 | 23 | 383 | 7.49e-64 | 217 |
| Msa1399930 | MtrunA17_Chr8g0335651 | 39.633 | 381 | 146 | 11 | 10 | 331 | 23 | 378 | 2.38e-53 | 189 |
| Msa1399930 | MtrunA17_Chr8g0335591 | 36.269 | 386 | 192 | 10 | 331 | 674 | 22 | 395 | 8.11e-61 | 209 |
| Msa1399930 | MtrunA17_Chr8g0335591 | 35.620 | 379 | 173 | 11 | 10 | 329 | 22 | 388 | 4.11e-55 | 194 |
| Msa1399930 | MtrunA17_Chr8g0335631 | 38.281 | 384 | 185 | 10 | 331 | 674 | 22 | 393 | 1.09e-56 | 198 |
| Msa1399930 | MtrunA17_Chr8g0335631 | 38.441 | 372 | 160 | 10 | 10 | 324 | 22 | 381 | 4.97e-52 | 186 |
| Msa1399930 | MtrunA17_Chr1g0199801 | 27.638 | 398 | 203 | 17 | 341 | 677 | 75 | 448 | 4.87e-25 | 108 |
| Msa1399930 | MtrunA17_Chr1g0199801 | 29.592 | 294 | 161 | 12 | 20 | 282 | 75 | 353 | 5.79e-24 | 105 |
| Msa1399930 | MtrunA17_Chr7g0259871 | 26.136 | 264 | 159 | 8 | 22 | 261 | 32 | 283 | 4.07e-18 | 87.0 |
| Msa1399930 | MtrunA17_Chr7g0259871 | 25.614 | 285 | 168 | 11 | 343 | 599 | 32 | 300 | 3.08e-16 | 81.3 |
| Msa1399930 | MtrunA17_Chr1g0185551 | 24.823 | 282 | 164 | 11 | 343 | 594 | 32 | 295 | 1.52e-14 | 75.9 |
| Msa1399930 | MtrunA17_Chr1g0185551 | 24.111 | 253 | 152 | 9 | 22 | 248 | 32 | 270 | 2.38e-14 | 75.5 |
| Msa1399930 | MtrunA17_Chr2g0292051 | 27.445 | 317 | 175 | 15 | 308 | 599 | 33 | 319 | 9.82e-14 | 73.9 |
| Msa1399930 | MtrunA17_Chr2g0292051 | 26.000 | 300 | 176 | 12 | 12 | 290 | 61 | 335 | 6.40e-13 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1399930 | AT2G26560.1 | 55.725 | 393 | 130 | 4 | 332 | 681 | 10 | 401 | 3.03e-144 | 427 |
| Msa1399930 | AT2G26560.1 | 53.763 | 372 | 111 | 4 | 11 | 322 | 10 | 380 | 1.04e-125 | 379 |
| Msa1399930 | AT4G37070.2 | 52.442 | 389 | 142 | 3 | 333 | 678 | 11 | 399 | 2.89e-132 | 396 |
| Msa1399930 | AT4G37070.2 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 4.87e-112 | 344 |
| Msa1399930 | AT4G37050.1 | 51.064 | 423 | 149 | 7 | 313 | 679 | 4 | 424 | 3.22e-127 | 384 |
| Msa1399930 | AT4G37050.1 | 47.382 | 382 | 129 | 6 | 13 | 324 | 28 | 407 | 1.11e-100 | 315 |
| Msa1399930 | AT4G37060.1 | 50.515 | 388 | 149 | 3 | 334 | 678 | 12 | 399 | 9.59e-127 | 382 |
| Msa1399930 | AT4G37060.1 | 46.774 | 372 | 138 | 3 | 13 | 324 | 12 | 383 | 4.89e-107 | 331 |
| Msa1399930 | AT4G37070.3 | 51.743 | 373 | 137 | 3 | 333 | 662 | 11 | 383 | 1.26e-123 | 373 |
| Msa1399930 | AT4G37070.3 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 3.74e-112 | 343 |
| Msa1399930 | AT4G37070.1 | 51.743 | 373 | 137 | 3 | 333 | 662 | 11 | 383 | 1.26e-123 | 373 |
| Msa1399930 | AT4G37070.1 | 49.598 | 373 | 128 | 4 | 12 | 324 | 11 | 383 | 3.74e-112 | 343 |
| Msa1399930 | AT4G37060.2 | 46.778 | 419 | 149 | 4 | 334 | 678 | 12 | 430 | 3.48e-120 | 366 |
| Msa1399930 | AT4G37060.2 | 43.176 | 403 | 138 | 4 | 13 | 324 | 12 | 414 | 1.49e-100 | 315 |
| Msa1399930 | AT4G37070.4 | 49.598 | 373 | 134 | 4 | 333 | 662 | 11 | 372 | 1.32e-114 | 349 |
| Msa1399930 | AT4G37070.4 | 47.453 | 373 | 125 | 5 | 12 | 324 | 11 | 372 | 3.18e-103 | 320 |
| Msa1399930 | AT5G43590.1 | 47.044 | 389 | 152 | 8 | 333 | 674 | 6 | 387 | 1.93e-92 | 293 |
| Msa1399930 | AT5G43590.1 | 44.297 | 377 | 139 | 9 | 12 | 324 | 6 | 375 | 1.51e-79 | 259 |
| Msa1399930 | AT5G43590.2 | 45.906 | 403 | 164 | 8 | 319 | 674 | 59 | 454 | 1.43e-91 | 293 |
| Msa1399930 | AT5G43590.2 | 44.297 | 377 | 139 | 9 | 12 | 324 | 73 | 442 | 1.46e-78 | 259 |
| Msa1399930 | AT4G29800.2 | 26.076 | 395 | 223 | 16 | 341 | 681 | 121 | 500 | 1.97e-22 | 102 |
| Msa1399930 | AT4G29800.2 | 27.304 | 293 | 163 | 13 | 20 | 273 | 121 | 402 | 2.67e-18 | 89.4 |
| Msa1399930 | AT3G54950.1 | 28.862 | 246 | 136 | 8 | 20 | 241 | 98 | 328 | 3.04e-22 | 101 |
| Msa1399930 | AT3G54950.1 | 31.325 | 249 | 126 | 10 | 341 | 562 | 98 | 328 | 3.77e-22 | 100 |
| Msa1399930 | AT4G29800.1 | 26.329 | 395 | 221 | 17 | 341 | 681 | 121 | 499 | 3.12e-22 | 101 |
| Msa1399930 | AT4G29800.1 | 27.304 | 293 | 163 | 13 | 20 | 273 | 121 | 402 | 2.73e-18 | 89.4 |
| Msa1399930 | AT2G39220.1 | 28.571 | 287 | 161 | 12 | 20 | 281 | 108 | 375 | 7.21e-22 | 100 |
| Msa1399930 | AT2G39220.1 | 28.276 | 290 | 164 | 12 | 341 | 605 | 108 | 378 | 2.67e-21 | 98.6 |
| Msa1399930 | AT3G63200.1 | 27.935 | 247 | 134 | 10 | 343 | 562 | 32 | 261 | 1.18e-17 | 85.9 |
| Msa1399930 | AT3G63200.1 | 26.721 | 247 | 137 | 9 | 22 | 241 | 32 | 261 | 2.53e-17 | 85.1 |
Find 176 sgRNAs with CRISPR-Local
Find 521 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAATAATCTTTCTCCAATT+TGG | 0.154529 | tig0022412:-56544 | None:intergenic |
| TCTCTATATTAAAGCATTAT+TGG | 0.161822 | tig0022412:-62705 | None:intergenic |
| TGGACAATGTTCCAAGTAAA+AGG | 0.173001 | tig0022412:-55313 | None:intergenic |
| TTAGATAAACTTTGCCAAAT+TGG | 0.206887 | tig0022412:+56530 | Msa1399930:CDS |
| GCATCGACGGTGGTGGTATT+AGG | 0.208767 | tig0022412:+55103 | Msa1399930:CDS |
| CCTCTCTTGAGAAAGTATTT+TGG | 0.229410 | tig0022412:-62654 | None:intergenic |
| TCAACAATTTGTCACCAATT+TGG | 0.229429 | tig0022412:-62458 | None:intergenic |
| ATGTTTGAGCCTATTGAAAA+TGG | 0.238787 | tig0022412:+56602 | Msa1399930:CDS |
| GGCAGCAAAATGGGGTCTTT+TGG | 0.249313 | tig0022412:+56081 | Msa1399930:CDS |
| ATGTTTGAGCCAATTGAAAA+TGG | 0.253040 | tig0022412:+62516 | Msa1399930:CDS |
| ATTCAAAACTGGCAGCAAAA+TGG | 0.257627 | tig0022412:+56071 | Msa1399930:CDS |
| TCTAAATTGACCTTAGATAT+TGG | 0.264791 | tig0022412:-62486 | None:intergenic |
| TTGACTAAAGATATCAATTA+AGG | 0.272567 | tig0022412:-56131 | None:intergenic |
| AGGTATTTCCCATCATATTT+TGG | 0.273356 | tig0022412:-61677 | None:intergenic |
| TTGACTAAACATGTCGATTA+AGG | 0.277813 | tig0022412:-62286 | None:intergenic |
| ATGCGAAAATGGCAGCAAAA+TGG | 0.281352 | tig0022412:+62226 | Msa1399930:CDS |
| GGAGAGTGTTCCAAGTAAAA+TGG | 0.292232 | tig0022412:-61507 | None:intergenic |
| GCTGCTCCTACTTATCTTCC+TGG | 0.297373 | tig0022412:+55720 | Msa1399930:CDS |
| TAGTCAATCATCAGCTGATA+TGG | 0.302481 | tig0022412:+62302 | Msa1399930:CDS |
| GTATCGATGGTGGCGGCATT+AGG | 0.306980 | tig0022412:+61298 | Msa1399930:CDS |
| ATTGAAGAAACCAGTATCTA+AGG | 0.307953 | tig0022412:+56562 | Msa1399930:CDS |
| CACAAACACCGCCGTCAATA+AGG | 0.313302 | tig0022412:-61946 | None:intergenic |
| CATCGACGGTGGTGGTATTA+GGG | 0.320659 | tig0022412:+55104 | Msa1399930:CDS |
| TATCGATGGTGGCGGCATTA+GGG | 0.321921 | tig0022412:+61299 | Msa1399930:CDS |
| TTCAAAACTGGCAGCAAAAT+GGG | 0.322622 | tig0022412:+56072 | Msa1399930:CDS |
| AGGTATTTCCCATCGTATTT+TGG | 0.327115 | tig0022412:-55522 | None:intergenic |
| TGCGAAAATGGCAGCAAAAT+GGG | 0.333561 | tig0022412:+62227 | Msa1399930:CDS |
| GAACTTATGCAGGCACTTGC+TGG | 0.336587 | tig0022412:+55464 | Msa1399930:intron |
| TCTAAATTAACCTTAGATAC+TGG | 0.337016 | tig0022412:-56572 | None:intergenic |
| AGTGGACGTTGTTTATCATT+TGG | 0.339325 | tig0022412:-55267 | None:intergenic |
| GTGTGTTGCCTTCTGTATCT+TGG | 0.340354 | tig0022412:-61913 | None:intergenic |
| TTGTGTTGTGGGAAGATCTT+AGG | 0.341209 | tig0022412:-61528 | None:intergenic |
| GATTACTTTGATGTGATTAC+AGG | 0.344649 | tig0022412:+55204 | Msa1399930:CDS |
| GATTACTTTGATGTGATTAC+AGG | 0.344649 | tig0022412:+61399 | Msa1399930:CDS |
| ATTCTTGAAGTTGTGATTCA+AGG | 0.353342 | tig0022412:-61350 | None:intergenic |
| TAGTCAATCCTCTGGAGATA+TGG | 0.353427 | tig0022412:+56147 | Msa1399930:CDS |
| AAATGTCGGAATCACAATAT+TGG | 0.358725 | tig0022412:-61753 | None:intergenic |
| TTGATAATATCACTGGGAAC+TGG | 0.359899 | tig0022412:+62177 | Msa1399930:CDS |
| GCTATATTCCATGGGTTTGA+TGG | 0.366448 | tig0022412:-55993 | None:intergenic |
| ATTATATTCCATAGGCTTGA+TGG | 0.369030 | tig0022412:-62148 | None:intergenic |
| ATTCTTGAAGTTGCGATTCA+AGG | 0.379087 | tig0022412:-55155 | None:intergenic |
| ACAAAAGTTTGATTCAAAAC+TGG | 0.388763 | tig0022412:+56060 | Msa1399930:CDS |
| GGCAGCAAAATGGGGTCTGC+TGG | 0.394148 | tig0022412:+62236 | Msa1399930:CDS |
| GTACAGTCCCTTCTGTATCT+TGG | 0.396391 | tig0022412:-55758 | None:intergenic |
| TGAAGTGGTAAGGGAGAAGT+TGG | 0.397346 | tig0022412:+61703 | Msa1399930:CDS |
| GTGTGGTTAGGGAGAAGCTT+GGG | 0.398981 | tig0022412:+55550 | Msa1399930:CDS |
| GATGATATTTCAGACTTTAG+TGG | 0.399940 | tig0022412:+62074 | Msa1399930:intron |
| GAACTCATGCAGGGACTTGT+TGG | 0.403597 | tig0022412:+61619 | Msa1399930:intron |
| AAACGTGGGGATCACAATAT+TGG | 0.404692 | tig0022412:-55598 | None:intergenic |
| AATACCTACACAGTGTGGTT+AGG | 0.406721 | tig0022412:+55538 | Msa1399930:CDS |
| CAGGCACTTGCTGGGACTGG+TGG | 0.408008 | tig0022412:+55473 | Msa1399930:intron |
| CAAAATGGGGTCTGCTGGAT+TGG | 0.411164 | tig0022412:+62241 | Msa1399930:CDS |
| GTTGAAGAAACCAATATCTA+AGG | 0.412435 | tig0022412:+62476 | Msa1399930:CDS |
| GCTGCACCTACATATCTTCC+AGG | 0.418184 | tig0022412:+61875 | Msa1399930:CDS |
| AACTCATGCAGGGACTTGTT+GGG | 0.426138 | tig0022412:+61620 | Msa1399930:intron |
| TGTTTGAGCCTATTGAAAAT+GGG | 0.427789 | tig0022412:+56603 | Msa1399930:CDS |
| TCTAAGGTTAATTTAGAGAA+TGG | 0.429460 | tig0022412:+56578 | Msa1399930:CDS |
| GAAATTGTTCAAATCATTAA+CGG | 0.431351 | tig0022412:+55497 | Msa1399930:CDS |
| GAAGTGGTAAGGGAGAAGTT+GGG | 0.431386 | tig0022412:+61704 | Msa1399930:CDS |
| CTAATAATCTCATTGGGCAC+TGG | 0.438749 | tig0022412:+56022 | Msa1399930:CDS |
| CAGATTCAGCCTCCCACCTA+TGG | 0.440384 | tig0022412:+61255 | Msa1399930:CDS |
| AACTTATGCAGGCACTTGCT+GGG | 0.440494 | tig0022412:+55465 | Msa1399930:intron |
| TGTTTGAGCCAATTGAAAAT+GGG | 0.441270 | tig0022412:+62517 | Msa1399930:CDS |
| CAAATTCAGCCTCCCACCTA+TGG | 0.443188 | tig0022412:+55060 | Msa1399930:CDS |
| AAATTGTTCAAATCATTAAC+GGG | 0.445917 | tig0022412:+55498 | Msa1399930:CDS |
| TAGAAAACGGCTATATTCCA+TGG | 0.449347 | tig0022412:-56002 | None:intergenic |
| AAATTATTCAGATCATTAGT+AGG | 0.450532 | tig0022412:+61653 | Msa1399930:CDS |
| AGGAACTCGAGGATAGTTGC+AGG | 0.459678 | tig0022412:-61330 | None:intergenic |
| TCGCTTCTTGATAATATCAC+TGG | 0.461430 | tig0022412:+62170 | Msa1399930:CDS |
| GGACAATGTTCCAAGTAAAA+GGG | 0.464623 | tig0022412:-55312 | None:intergenic |
| CTTCTATGCCATCAAGCCTA+TGG | 0.470246 | tig0022412:+62140 | Msa1399930:CDS |
| GCCTCCCACCTATGGAAACT+TGG | 0.472414 | tig0022412:+61263 | Msa1399930:CDS |
| CCAAAATACTTTCTCAAGAG+AGG | 0.474475 | tig0022412:+62654 | Msa1399930:CDS |
| CAGGGACTTGTTGGGATCAG+TGG | 0.475838 | tig0022412:+61628 | Msa1399930:intron |
| GATATCTTTAGTCAATCCTC+TGG | 0.480270 | tig0022412:+56139 | Msa1399930:CDS |
| GATATACGTACTTGTGTTGT+GGG | 0.481161 | tig0022412:-61539 | None:intergenic |
| AGGCACTTGCTGGGACTGGT+GGG | 0.481875 | tig0022412:+55474 | Msa1399930:intron |
| ATGCAGGCACTTGCTGGGAC+TGG | 0.483803 | tig0022412:+55470 | Msa1399930:intron |
| TGACTAAACATGTCGATTAA+GGG | 0.483825 | tig0022412:-62285 | None:intergenic |
| TCTAAGGTCAATTTAGAGAA+TGG | 0.484352 | tig0022412:+62492 | Msa1399930:CDS |
| ATACCTACACAGTGTGGTTA+GGG | 0.485763 | tig0022412:+55539 | Msa1399930:CDS |
| CATGAATTCAACCTTATTGA+CGG | 0.485875 | tig0022412:+61935 | Msa1399930:CDS |
| AATACCTTCATGAAGTGGTA+AGG | 0.488193 | tig0022412:+61693 | Msa1399930:CDS |
| CCAATGAGATTATTAGAAAA+CGG | 0.491994 | tig0022412:-56015 | None:intergenic |
| TTAGTAGGACCAAAATATGA+TGG | 0.496410 | tig0022412:+61668 | Msa1399930:CDS |
| AGGAACTCGAGAATAGTTGC+GGG | 0.498265 | tig0022412:-55135 | None:intergenic |
| AAGTGGTAAGGGAGAAGTTG+GGG | 0.499535 | tig0022412:+61705 | Msa1399930:CDS |
| CGTGAGTTCAACCTCATTGA+TGG | 0.500018 | tig0022412:+55780 | Msa1399930:CDS |
| TGACTAAAGATATCAATTAA+GGG | 0.500555 | tig0022412:-56130 | None:intergenic |
| CTAACCAAGAAGCTCTCAAA+AGG | 0.500687 | tig0022412:+62544 | Msa1399930:CDS |
| TTGTAACCAGGAAGATAAGT+AGG | 0.501497 | tig0022412:-55726 | None:intergenic |
| AGGGACTTGTTGGGATCAGT+GGG | 0.501975 | tig0022412:+61629 | Msa1399930:intron |
| CCAACCAAGAAGCTCTCAAA+AGG | 0.511212 | tig0022412:+56630 | Msa1399930:CDS |
| TTGCATGGATGCTCGACTCT+CGG | 0.512268 | tig0022412:+55677 | Msa1399930:CDS |
| TTGCATGGATGCTCGACTCT+CGG | 0.512268 | tig0022412:+61832 | Msa1399930:CDS |
| GATCAAGAAAACCCCTTGCA+TGG | 0.513274 | tig0022412:+61817 | Msa1399930:intron |
| TTAAAGCATTATTGGTGTGA+GGG | 0.513489 | tig0022412:-62697 | None:intergenic |
| CGCTTCTTGATAATATCACT+GGG | 0.516348 | tig0022412:+62171 | Msa1399930:CDS |
| TTGTAGCCTGGAAGATATGT+AGG | 0.518439 | tig0022412:-61881 | None:intergenic |
| GGCACTTGCTGGGACTGGTG+GGG | 0.520089 | tig0022412:+55475 | Msa1399930:intron |
| GTAAAAGGGCTTGATATCCT+TGG | 0.530283 | tig0022412:-55298 | None:intergenic |
| TGGTTCTTGAAATTGTAGCC+TGG | 0.542827 | tig0022412:-61893 | None:intergenic |
| GTCACTAAGTTTCCATAGGT+GGG | 0.548697 | tig0022412:-55072 | None:intergenic |
| AGTCACTAAGTTTCCATAGG+TGG | 0.549310 | tig0022412:-55073 | None:intergenic |
| TAAAGCATTATTGGTGTGAG+GGG | 0.552577 | tig0022412:-62696 | None:intergenic |
| GATCAAGAAAGCCCCTTGCA+TGG | 0.552645 | tig0022412:+55662 | Msa1399930:intron |
| TGATAATATCACTGGGAACT+GGG | 0.554557 | tig0022412:+62178 | Msa1399930:CDS |
| AGTCACCAAGTTTCCATAGG+TGG | 0.554860 | tig0022412:-61268 | None:intergenic |
| AATAGTCACTAAGTTTCCAT+AGG | 0.559064 | tig0022412:-55076 | None:intergenic |
| TATAGTCACCAAGTTTCCAT+AGG | 0.562234 | tig0022412:-61271 | None:intergenic |
| AGATATACGTACTTGTGTTG+TGG | 0.562759 | tig0022412:-61540 | None:intergenic |
| AGAAAACGGCTATATTCCAT+GGG | 0.563089 | tig0022412:-56001 | None:intergenic |
| ATCGACGGTGGTGGTATTAG+GGG | 0.564683 | tig0022412:+55105 | Msa1399930:CDS |
| GCGAAAATGGCAGCAAAATG+GGG | 0.566216 | tig0022412:+62228 | Msa1399930:CDS |
| GAGAGTCGAGCATCCATGCA+AGG | 0.566902 | tig0022412:-55675 | None:intergenic |
| ATACAGGATGATACATTGAC+GGG | 0.570155 | tig0022412:+62384 | Msa1399930:intron |
| ATTAAAGCATTATTGGTGTG+AGG | 0.572481 | tig0022412:-62698 | None:intergenic |
| AAGATAAGTAGGAGCAGCAG+AGG | 0.572780 | tig0022412:-55715 | None:intergenic |
| GTCACCAAGTTTCCATAGGT+GGG | 0.573182 | tig0022412:-61267 | None:intergenic |
| AGAGTCGAGCATCCATGCAA+GGG | 0.575582 | tig0022412:-55674 | None:intergenic |
| TAGTAGGACCAAAATATGAT+GGG | 0.575853 | tig0022412:+61669 | Msa1399930:CDS |
| TCTCCCTTACCACTTCATGA+AGG | 0.576054 | tig0022412:-61697 | None:intergenic |
| ATACCTTCATGAAGTGGTAA+GGG | 0.581117 | tig0022412:+61694 | Msa1399930:CDS |
| TGGTGTTTGTGCAAATAATC+CGG | 0.582343 | tig0022412:+55803 | Msa1399930:CDS |
| ATCGATGGTGGCGGCATTAG+GGG | 0.586031 | tig0022412:+61300 | Msa1399930:CDS |
| GATACAGGATGATACATTGA+CGG | 0.586303 | tig0022412:+62383 | Msa1399930:intron |
| CTGCTGGATTGGTTAACTCA+CGG | 0.586370 | tig0022412:+62252 | Msa1399930:CDS |
| AATTAGACGGTGAATCTGCT+AGG | 0.587927 | tig0022412:+55175 | Msa1399930:CDS |
| AATTAGACGGTGAATCTGCT+AGG | 0.587927 | tig0022412:+61370 | Msa1399930:CDS |
| GAGAGTCGAGCATCCATGCA+AGG | 0.588475 | tig0022412:-61830 | None:intergenic |
| GTTTGAGCCAATTGAAAATG+GGG | 0.588730 | tig0022412:+62518 | Msa1399930:CDS |
| ATTCTAAGCATCGACGGTGG+TGG | 0.589977 | tig0022412:+55096 | Msa1399930:CDS |
| TGTGAGGGGATTTCAACTCT+CGG | 0.590652 | tig0022412:-62682 | None:intergenic |
| AGAGTCGAGCATCCATGCAA+GGG | 0.591569 | tig0022412:-61829 | None:intergenic |
| CACAAACACCACCATCAATG+AGG | 0.592240 | tig0022412:-55791 | None:intergenic |
| AAGAAGCGATTATATTCCAT+AGG | 0.592377 | tig0022412:-62156 | None:intergenic |
| GTTTGAGCCTATTGAAAATG+GGG | 0.597788 | tig0022412:+56604 | Msa1399930:CDS |
| TTCAAGAACCAAGATACAGA+AGG | 0.598347 | tig0022412:+55750 | Msa1399930:CDS |
| ATCATTTGGAGCACTTAACA+TGG | 0.599256 | tig0022412:-55253 | None:intergenic |
| TAACGGGACCAAAATACGAT+GGG | 0.602205 | tig0022412:+55514 | Msa1399930:CDS |
| TCAAAACTGGCAGCAAAATG+GGG | 0.603239 | tig0022412:+56073 | Msa1399930:CDS |
| AAGGAACTCGAGAATAGTTG+CGG | 0.605964 | tig0022412:-55136 | None:intergenic |
| CGGTGTTTGTGCAAATAACC+CGG | 0.607334 | tig0022412:+61958 | Msa1399930:CDS |
| AGTGTGGTTAGGGAGAAGCT+TGG | 0.607976 | tig0022412:+55549 | Msa1399930:CDS |
| TGGGAAATACCTTCATGAAG+TGG | 0.608258 | tig0022412:+61688 | Msa1399930:CDS |
| GTGACTATACTAAGTATCGA+TGG | 0.613910 | tig0022412:+61285 | Msa1399930:CDS |
| TCACAACTTCAAGAATTAGA+CGG | 0.624572 | tig0022412:+61357 | Msa1399930:CDS |
| TTCAAGAACCAAGATACAGA+AGG | 0.625819 | tig0022412:+61905 | Msa1399930:CDS |
| TGGTTCTTGAAGTTGTAACC+AGG | 0.626960 | tig0022412:-55738 | None:intergenic |
| GTTGTGATTCAAGGAACTCG+AGG | 0.627802 | tig0022412:-61341 | None:intergenic |
| AAGATATGTAGGTGCAGCAG+AGG | 0.629508 | tig0022412:-61870 | None:intergenic |
| ATACTAAGTATCGATGGTGG+CGG | 0.632401 | tig0022412:+61291 | Msa1399930:CDS |
| TCAAGAACCAAGATACAGAA+GGG | 0.635453 | tig0022412:+55751 | Msa1399930:CDS |
| TGTGGTTAGGGAGAAGCTTG+GGG | 0.637104 | tig0022412:+55551 | Msa1399930:CDS |
| TTAACGGGACCAAAATACGA+TGG | 0.640656 | tig0022412:+55513 | Msa1399930:CDS |
| CTAAGAATTTGCAAGCAATG+AGG | 0.644090 | tig0022412:-62735 | None:intergenic |
| TAAGGGAGTTGAACCACCGT+GGG | 0.644389 | tig0022412:-56113 | None:intergenic |
| TCTCCCTAACCACACTGTGT+AGG | 0.645782 | tig0022412:-55542 | None:intergenic |
| GAGTCGAGCATCCATGCAAG+GGG | 0.652281 | tig0022412:-55673 | None:intergenic |
| AGTGGTAAGGGAGAAGTTGG+GGG | 0.653344 | tig0022412:+61706 | Msa1399930:CDS |
| TCGCAACTTCAAGAATTAGA+CGG | 0.655679 | tig0022412:+55162 | Msa1399930:CDS |
| AAATACTTTCTCAAGAGAGG+AGG | 0.656017 | tig0022412:+62657 | Msa1399930:CDS |
| GAAATCAACCATATCTCCAG+AGG | 0.656859 | tig0022412:-56155 | None:intergenic |
| GAGTCGAGCATCCATGCAAG+GGG | 0.660750 | tig0022412:-61828 | None:intergenic |
| ACCAAGTTTCCATAGGTGGG+AGG | 0.664617 | tig0022412:-61264 | None:intergenic |
| GTGACTATTCTAAGCATCGA+CGG | 0.670875 | tig0022412:+55090 | Msa1399930:CDS |
| ACTAAGTTTCCATAGGTGGG+AGG | 0.690895 | tig0022412:-55069 | None:intergenic |
| TTAAGGGAGTTGAACCACCG+TGG | 0.712500 | tig0022412:-56114 | None:intergenic |
| GAATTCAACCTTATTGACGG+CGG | 0.715959 | tig0022412:+61938 | Msa1399930:CDS |
| ACTATACTAAGTATCGATGG+TGG | 0.718258 | tig0022412:+61288 | Msa1399930:CDS |
| GAGTTCAACCTCATTGATGG+TGG | 0.718974 | tig0022412:+55783 | Msa1399930:CDS |
| CTGGATTGGTTAACTCACGG+TGG | 0.721558 | tig0022412:+62255 | Msa1399930:CDS |
| TTGGATTGGTTAACCCACGG+TGG | 0.722351 | tig0022412:+56100 | Msa1399930:CDS |
| TGGGAAATACCTACACAGTG+TGG | 0.740267 | tig0022412:+55533 | Msa1399930:CDS |
| ACTATTCTAAGCATCGACGG+TGG | 0.761071 | tig0022412:+55093 | Msa1399930:CDS |
| GGGACTTGTTGGGATCAGTG+GGG | 0.764722 | tig0022412:+61630 | Msa1399930:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTAGTTTTATTTGTTTT+TGG | + | tig0022412:55891-55910 | Msa1399930:intron | 10.0% |
| !!! | TAAGAAAATATTCATTTTTT+AGG | - | tig0022412:56386-56405 | None:intergenic | 10.0% |
| !! | ATTTAATTAATACAATACAT+GGG | - | tig0022412:57366-57385 | None:intergenic | 10.0% |
| !!! | TATTTAGTAAATTTTGTTTT+AGG | - | tig0022412:57569-57588 | None:intergenic | 10.0% |
| !! | ATAGAGTAATAATATTATTA+AGG | + | tig0022412:58897-58916 | Msa1399930:intron | 10.0% |
| !! | TAGAGTAATAATATTATTAA+GGG | + | tig0022412:58898-58917 | Msa1399930:intron | 10.0% |
| !!! | AAAAAATTCTAACTTTTTTT+GGG | - | tig0022412:59212-59231 | None:intergenic | 10.0% |
| !!! | TAAAAAATTCTAACTTTTTT+TGG | - | tig0022412:59213-59232 | None:intergenic | 10.0% |
| !!! | TAAATATGAATTTTTATGTT+TGG | + | tig0022412:59246-59265 | Msa1399930:intron | 10.0% |
| !! | ACAAAAATTTACTTAAAAAT+AGG | + | tig0022412:59375-59394 | Msa1399930:intron | 10.0% |
| !! | CAAAAATTTACTTAAAAATA+GGG | + | tig0022412:59376-59395 | Msa1399930:intron | 10.0% |
| !!! | ATTAGGTTAATTAAATTTTA+AGG | - | tig0022412:59607-59626 | None:intergenic | 10.0% |
| !!! | TTATTTATAAGAAATTTTGT+TGG | + | tig0022412:60191-60210 | Msa1399930:intron | 10.0% |
| !!! | ATTTTGTACAAAAAAAAAAA+AGG | + | tig0022412:60228-60247 | Msa1399930:intron | 10.0% |
| !!! | AAAAAGGTTATTTTTTTATA+AGG | + | tig0022412:60244-60263 | Msa1399930:intron | 10.0% |
| !!! | AAAAGGTTATTTTTTTATAA+GGG | + | tig0022412:60245-60264 | Msa1399930:intron | 10.0% |
| !! | AAAAAATCCTATTAAAATAT+AGG | - | tig0022412:60326-60345 | None:intergenic | 10.0% |
| !!! | AATATAAGAATTTGATTTAT+CGG | - | tig0022412:60748-60767 | None:intergenic | 10.0% |
| !! | TATAAATAATATTAATTGGT+TGG | - | tig0022412:61110-61129 | None:intergenic | 10.0% |
| !! | GGTTTATAAATAATATTAAT+TGG | - | tig0022412:61114-61133 | None:intergenic | 10.0% |
| !!! | TTTAAAATTTTACAAAATGT+TGG | - | tig0022412:61580-61599 | None:intergenic | 10.0% |
| !! | TTATAAGATGAGAAAATAAT+TGG | - | tig0022412:55642-55661 | None:intergenic | 15.0% |
| !! | TTATTCAATGAATCTAAAAA+AGG | - | tig0022412:56312-56331 | None:intergenic | 15.0% |
| !! | TCATTCAATGATTATATTTA+TGG | + | tig0022412:56663-56682 | Msa1399930:intron | 15.0% |
| !!! | AATTTTCTACATTTTTTTTG+AGG | - | tig0022412:56714-56733 | None:intergenic | 15.0% |
| !!! | TTTGTATTTATAATTTGTGT+TGG | + | tig0022412:56959-56978 | Msa1399930:intron | 15.0% |
| !! | TTTATTAAAGAGAGTTTATT+TGG | + | tig0022412:57226-57245 | Msa1399930:intron | 15.0% |
| !! | ATTTAGAGAGTTTATTAAAA+CGG | + | tig0022412:57259-57278 | Msa1399930:intron | 15.0% |
| !! | CATTTAATTAATACAATACA+TGG | - | tig0022412:57367-57386 | None:intergenic | 15.0% |
| !! | TGTGTATGTATAAAAATTAA+CGG | + | tig0022412:58010-58029 | Msa1399930:intron | 15.0% |
| !! | TTATGAAATAAAAGAATGTT+GGG | - | tig0022412:58309-58328 | None:intergenic | 15.0% |
| !! | TTTATGAAATAAAAGAATGT+TGG | - | tig0022412:58310-58329 | None:intergenic | 15.0% |
| !! | GAAAAGTTAGTATATTTATA+AGG | + | tig0022412:59467-59486 | Msa1399930:intron | 15.0% |
| !!! | GATTAAATATTCAAGTTATT+AGG | - | tig0022412:59624-59643 | None:intergenic | 15.0% |
| !!! | GTGCTTAAAATATTAATTTT+AGG | + | tig0022412:60679-60698 | Msa1399930:intron | 15.0% |
| !! | TTAATATAAATCATCAATAG+TGG | - | tig0022412:60712-60731 | None:intergenic | 15.0% |
| !! | TTATAAGATGAGAAAATAAT+TGG | - | tig0022412:55642-55661 | None:intergenic | 15.0% |
| !! | ATACTATTTAGTATATATAC+CGG | - | tig0022412:61980-61999 | None:intergenic | 15.0% |
| !! | TTTACAAGTTAAATAAAGTT+TGG | - | tig0022412:62026-62045 | None:intergenic | 15.0% |
| !! | GAAATTGTTCAAATCATTAA+CGG | + | tig0022412:55497-55516 | Msa1399930:CDS | 20.0% |
| !! | AAATTGTTCAAATCATTAAC+GGG | + | tig0022412:55498-55517 | Msa1399930:CDS | 20.0% |
| !!! | ATTAGTCATTTTCAATATAC+CGG | - | tig0022412:55825-55844 | None:intergenic | 20.0% |
| !! | TGACTAAAGATATCAATTAA+GGG | - | tig0022412:56133-56152 | None:intergenic | 20.0% |
| !! | TTGACTAAAGATATCAATTA+AGG | - | tig0022412:56134-56153 | None:intergenic | 20.0% |
| !!! | TATTTTCTTATATTTGAGAC+CGG | + | tig0022412:56396-56415 | Msa1399930:intron | 20.0% |
| !!! | TTTATCTAAATTCTCTTTTG+TGG | - | tig0022412:56519-56538 | None:intergenic | 20.0% |
| !!! | TTTTACTAATTTAACAAGAG+TGG | - | tig0022412:57810-57829 | None:intergenic | 20.0% |
| !! | AACATAGTAGAAATATAAGA+TGG | - | tig0022412:57941-57960 | None:intergenic | 20.0% |
| !! | AAATAAGATAAGTTTCTTTG+TGG | + | tig0022412:57969-57988 | Msa1399930:intron | 20.0% |
| !! | TGTATAAAAATTAACGGTAA+TGG | + | tig0022412:58016-58035 | Msa1399930:intron | 20.0% |
| !! | CAAAACAAAACAATGTAATT+TGG | - | tig0022412:58146-58165 | None:intergenic | 20.0% |
| !! | GATGAATGATTGATATTAAA+TGG | - | tig0022412:58206-58225 | None:intergenic | 20.0% |
| !!! | TTAGTCATTTTTCAACAAAT+GGG | - | tig0022412:58497-58516 | None:intergenic | 20.0% |
| !!! | TTTAGTCATTTTTCAACAAA+TGG | - | tig0022412:58498-58517 | None:intergenic | 20.0% |
| !!! | GAAATGAAAGTTGATATATT+TGG | - | tig0022412:58944-58963 | None:intergenic | 20.0% |
| !!! | TCTAGGGTTAAATATATTTT+TGG | + | tig0022412:59008-59027 | Msa1399930:intron | 20.0% |
| !!! | GAAAAGTTGGTATATTTATA+GGG | - | tig0022412:59035-59054 | None:intergenic | 20.0% |
| !!! | TGAAAAGTTGGTATATTTAT+AGG | - | tig0022412:59036-59055 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | - | tig0022412:59126-59145 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | - | tig0022412:59127-59146 | None:intergenic | 20.0% |
| !!! | ATATGAATTTTTATGTTTGG+TGG | + | tig0022412:59249-59268 | Msa1399930:intron | 20.0% |
| !!! | TAGTGGTTGAAAATTTTATA+GGG | + | tig0022412:59407-59426 | Msa1399930:intron | 20.0% |
| !!! | AAATGGGTTAAATATCTTTT+TGG | - | tig0022412:59494-59513 | None:intergenic | 20.0% |
| !!! | AAGCGTAATTTATCTAAAAT+TGG | + | tig0022412:60066-60085 | Msa1399930:intron | 20.0% |
| !!! | AGCGTAATTTATCTAAAATT+GGG | + | tig0022412:60067-60086 | Msa1399930:intron | 20.0% |
| !!! | TTTTTTAAACTAAAACGATG+AGG | - | tig0022412:60095-60114 | None:intergenic | 20.0% |
| !! | TAGATTTAAATACTACCTAT+AGG | - | tig0022412:60135-60154 | None:intergenic | 20.0% |
| !!! | TTTAGAGCCTATATTTTAAT+AGG | + | tig0022412:60316-60335 | Msa1399930:intron | 20.0% |
| !! | ACGACATAATATAATATTGA+AGG | + | tig0022412:60911-60930 | Msa1399930:intron | 20.0% |
| !! | TATGGAATCAAATATATGTT+TGG | - | tig0022412:61208-61227 | None:intergenic | 20.0% |
| !! | ACATATATTTGATTCCATAA+TGG | + | tig0022412:61209-61228 | Msa1399930:intron | 20.0% |
| !! | AAATTATTCAGATCATTAGT+AGG | + | tig0022412:61653-61672 | Msa1399930:CDS | 20.0% |
| !!! | ATTGTTTTTATGTCAAATGT+CGG | - | tig0022412:61770-61789 | None:intergenic | 20.0% |
| !! | TACTATTTAGTATATATACC+GGG | - | tig0022412:61979-61998 | None:intergenic | 20.0% |
| !!! | TGACTAATTAGTTTTGTTTT+TGG | + | tig0022412:62050-62069 | Msa1399930:intron | 20.0% |
| !!! | TTGAATTTTTGTTCATTCTT+GGG | - | tig0022412:62207-62226 | None:intergenic | 20.0% |
| !!! | ATTGAATTTTTGTTCATTCT+TGG | - | tig0022412:62208-62227 | None:intergenic | 20.0% |
| !!! | TTTTTCTAAATTCTCTTTTG+TGG | - | tig0022412:62433-62452 | None:intergenic | 20.0% |
| !!! | TCTCTATATTAAAGCATTAT+TGG | - | tig0022412:62708-62727 | None:intergenic | 20.0% |
| ! | GTTATTCAATGAACTTAATG+TGG | - | tig0022412:55408-55427 | None:intergenic | 25.0% |
| ! | CCAATGAGATTATTAGAAAA+CGG | - | tig0022412:56018-56037 | None:intergenic | 25.0% |
| !! | CGTTTTCTAATAATCTCATT+GGG | + | tig0022412:56016-56035 | Msa1399930:CDS | 25.0% |
| !! | TCAAACTTTTGTTCATTCTT+TGG | - | tig0022412:56052-56071 | None:intergenic | 25.0% |
| ! | ACAAAAGTTTGATTCAAAAC+TGG | + | tig0022412:56060-56079 | Msa1399930:CDS | 25.0% |
| ! | ATTGTCAAGATAATTACCTT+AGG | + | tig0022412:56206-56225 | Msa1399930:intron | 25.0% |
| !!! | TCTTTTCTTATATTTGAGAC+CGG | - | tig0022412:56287-56306 | None:intergenic | 25.0% |
| ! | TTAGATAAACTTTGCCAAAT+TGG | + | tig0022412:56530-56549 | Msa1399930:CDS | 25.0% |
| ! | TCAATAATCTTTCTCCAATT+TGG | - | tig0022412:56547-56566 | None:intergenic | 25.0% |
| ! | TCTAAATTAACCTTAGATAC+TGG | - | tig0022412:56575-56594 | None:intergenic | 25.0% |
| !! | TCTAAGGTTAATTTAGAGAA+TGG | + | tig0022412:56578-56597 | Msa1399930:CDS | 25.0% |
| !! | ATAATTTGTGTTGGATTCAA+TGG | + | tig0022412:56968-56987 | Msa1399930:intron | 25.0% |
| ! | AAGCAATGGATATAAAGAAA+AGG | + | tig0022412:57001-57020 | Msa1399930:intron | 25.0% |
| !! | TTGACAAATAAGTTGGATAA+AGG | - | tig0022412:57340-57359 | None:intergenic | 25.0% |
| ! | AATTAAATGCCTAGATATGA+CGG | + | tig0022412:57378-57397 | Msa1399930:intron | 25.0% |
| ! | TCCAATTTAGATGCTTAAAT+GGG | + | tig0022412:57466-57485 | Msa1399930:intron | 25.0% |
| !!! | TAAATTTTGTTTTAGGTGCT+GGG | - | tig0022412:57562-57581 | None:intergenic | 25.0% |
| !!! | TCTCTCTCTTTAATTTTTGT+GGG | - | tig0022412:57665-57684 | None:intergenic | 25.0% |
| ! | ACAAAAATTAAAGAGAGAGA+GGG | + | tig0022412:57665-57684 | Msa1399930:intron | 25.0% |
| !! | CTTATATTTCTACTATGTTG+AGG | + | tig0022412:57942-57961 | Msa1399930:intron | 25.0% |
| ! | GAATAAAATGTAAAAGAGTG+AGG | + | tig0022412:58115-58134 | Msa1399930:intron | 25.0% |
| ! | TAAGAACATCTCTTTCTATA+TGG | + | tig0022412:58540-58559 | Msa1399930:intron | 25.0% |
| ! | AAGAACATCTCTTTCTATAT+GGG | + | tig0022412:58541-58560 | Msa1399930:intron | 25.0% |
| ! | TAGCTAGAATTTACTTCTTA+AGG | + | tig0022412:58789-58808 | Msa1399930:intron | 25.0% |
| ! | TTAACCCTAGAAAAATTAGA+GGG | - | tig0022412:58999-59018 | None:intergenic | 25.0% |
| ! | TTTAACCCTAGAAAAATTAG+AGG | - | tig0022412:59000-59019 | None:intergenic | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | - | tig0022412:59436-59455 | None:intergenic | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | - | tig0022412:59435-59454 | None:intergenic | 25.0% |
| !! | AAATTTTCAACCACTACTTT+TGG | - | tig0022412:59403-59422 | None:intergenic | 25.0% |
| !! | GTAGTGGTTGAAAATTTTAT+AGG | + | tig0022412:59406-59425 | Msa1399930:intron | 25.0% |
| !! | AAGTTGAAGGAAAATTTTAG+AGG | + | tig0022412:59435-59454 | Msa1399930:intron | 25.0% |
| !! | AGTTGAAGGAAAATTTTAGA+GGG | + | tig0022412:59436-59455 | Msa1399930:intron | 25.0% |
| ! | TAGTTATCAGATGTGTATTT+AGG | + | tig0022412:59686-59705 | Msa1399930:intron | 25.0% |
| ! | AGTTATCAGATGTGTATTTA+GGG | + | tig0022412:59687-59706 | Msa1399930:intron | 25.0% |
| ! | ACAATTGGATATTTCTCTTT+AGG | - | tig0022412:59731-59750 | None:intergenic | 25.0% |
| ! | AGAAATATCCAATTGTTGTA+GGG | + | tig0022412:59735-59754 | Msa1399930:intron | 25.0% |
| !!! | TTATATGTGTGTTGATTCAT+TGG | - | tig0022412:59929-59948 | None:intergenic | 25.0% |
| !! | TAGATAAATTACGCTTGTTA+TGG | - | tig0022412:60062-60081 | None:intergenic | 25.0% |
| ! | TAGTTAGAGCTGTTAAAATA+TGG | - | tig0022412:60407-60426 | None:intergenic | 25.0% |
| !! | TGATTTCTTTGATGATATTG+TGG | - | tig0022412:60532-60551 | None:intergenic | 25.0% |
| ! | TTTGAACCATTTAATGTTGA+TGG | + | tig0022412:60596-60615 | Msa1399930:intron | 25.0% |
| ! | TGCTAAAATAGAAAAACACA+GGG | - | tig0022412:60649-60668 | None:intergenic | 25.0% |
| ! | ATGCTAAAATAGAAAAACAC+AGG | - | tig0022412:60650-60669 | None:intergenic | 25.0% |
| ! | TGATGACTATTTCAACAAAA+AGG | + | tig0022412:60785-60804 | Msa1399930:intron | 25.0% |
| !! | TTTAAACTTTTGATCCCTTT+TGG | + | tig0022412:60821-60840 | Msa1399930:intron | 25.0% |
| ! | TATTACAAGGTAAACCAAAA+GGG | - | tig0022412:60838-60857 | None:intergenic | 25.0% |
| !! | TTACTTCATAAACTTGGTTT+TGG | - | tig0022412:60861-60880 | None:intergenic | 25.0% |
| ! | TTCAGTCGAATTGTATTTAT+AGG | - | tig0022412:61028-61047 | None:intergenic | 25.0% |
| !!! | TTTGGAATTAAGTTGAAGTT+TGG | - | tig0022412:61190-61209 | None:intergenic | 25.0% |
| ! | ATAAATATTTGAACTCATGC+AGG | + | tig0022412:61609-61628 | Msa1399930:intron | 25.0% |
| ! | TAAATATTTGAACTCATGCA+GGG | + | tig0022412:61610-61629 | Msa1399930:intron | 25.0% |
| ! | ACAAAAATTCAATGCGAAAA+TGG | + | tig0022412:62215-62234 | Msa1399930:CDS | 25.0% |
| ! | ATTCACAACATAATTACCTA+CGG | + | tig0022412:62361-62380 | Msa1399930:intron | 25.0% |
| ! | TTAGAAAAACTTTGCCAAAT+TGG | + | tig0022412:62444-62463 | Msa1399930:CDS | 25.0% |
| ! | TCTAAATTGACCTTAGATAT+TGG | - | tig0022412:62489-62508 | None:intergenic | 25.0% |
| !!! | ACATTTGTTTTAATCTTTGC+AGG | + | tig0022412:62627-62646 | Msa1399930:intron | 25.0% |
| AATAGTCACTAAGTTTCCAT+AGG | - | tig0022412:55079-55098 | None:intergenic | 30.0% | |
| GATTACTTTGATGTGATTAC+AGG | + | tig0022412:55204-55223 | Msa1399930:CDS | 30.0% | |
| !! | TTTTGTTGTGGGAAAATCTT+TGG | - | tig0022412:55336-55355 | None:intergenic | 30.0% |
| !! | TGTATACGTACTTTTGTTGT+GGG | - | tig0022412:55347-55366 | None:intergenic | 30.0% |
| ! | ATGTATACGTACTTTTGTTG+TGG | - | tig0022412:55348-55367 | None:intergenic | 30.0% |
| ! | CCGTTTTCTAATAATCTCAT+TGG | + | tig0022412:56015-56034 | Msa1399930:CDS | 30.0% |
| AGATAATTACCTTAGGATAC+AGG | + | tig0022412:56213-56232 | Msa1399930:intron | 30.0% | |
| TTTGTATTACCTGTATCCTA+AGG | - | tig0022412:56225-56244 | None:intergenic | 30.0% | |
| TTCATAAATTATACTCCCTC+CGG | + | tig0022412:56265-56284 | Msa1399930:intron | 30.0% | |
| ACGATATGAGAATTGAGAAA+TGG | - | tig0022412:56444-56463 | None:intergenic | 30.0% | |
| CTCATATCGTATAAAAATGC+AGG | + | tig0022412:56454-56473 | Msa1399930:intron | 30.0% | |
| ATTGAAGAAACCAGTATCTA+AGG | + | tig0022412:56562-56581 | Msa1399930:CDS | 30.0% | |
| ATGTTTGAGCCTATTGAAAA+TGG | + | tig0022412:56602-56621 | Msa1399930:CDS | 30.0% | |
| TGTTTGAGCCTATTGAAAAT+GGG | + | tig0022412:56603-56622 | Msa1399930:CDS | 30.0% | |
| ! | AGCTCTCAAAAGGTATATTA+TGG | + | tig0022412:56640-56659 | Msa1399930:intron | 30.0% |
| ATATCAACATTAATGCATGC+AGG | + | tig0022412:56759-56778 | Msa1399930:intron | 30.0% | |
| CAAAAATACTATCACAAGAG+AGG | + | tig0022412:56786-56805 | Msa1399930:intron | 30.0% | |
| !! | TTTTGTCCTTAAGCTAGTTT+TGG | + | tig0022412:56901-56920 | Msa1399930:intron | 30.0% |
| !!! | TTTGTCCTTAAGCTAGTTTT+GGG | + | tig0022412:56902-56921 | Msa1399930:intron | 30.0% |
| ATGGATGTAAAGAAAAGCAA+TGG | + | tig0022412:56987-57006 | Msa1399930:intron | 30.0% | |
| ACTTGTCTGGATTTGATAAA+TGG | + | tig0022412:57151-57170 | Msa1399930:intron | 30.0% | |
| ! | TTCTCGGAAAATTGTTTCTT+GGG | - | tig0022412:57298-57317 | None:intergenic | 30.0% |
| GTTGGATAAAGGAATTTGTA+AGG | - | tig0022412:57329-57348 | None:intergenic | 30.0% | |
| GCAAACTTACACAAATTATG+TGG | - | tig0022412:57406-57425 | None:intergenic | 30.0% | |
| ! | TATTGTAGATGGTCTTAATG+AGG | - | tig0022412:57440-57459 | None:intergenic | 30.0% |
| CTCCAATTTAGATGCTTAAA+TGG | + | tig0022412:57465-57484 | Msa1399930:intron | 30.0% | |
| ACCCATTTAAGCATCTAAAT+TGG | - | tig0022412:57470-57489 | None:intergenic | 30.0% | |
| !!! | GTAAATTTTGTTTTAGGTGC+TGG | - | tig0022412:57563-57582 | None:intergenic | 30.0% |
| CATACGTGATAAATTGTACA+CGG | - | tig0022412:57641-57660 | None:intergenic | 30.0% | |
| !! | CTCTCTCTCTTTAATTTTTG+TGG | - | tig0022412:57666-57685 | None:intergenic | 30.0% |
| CACAAAAATTAAAGAGAGAG+AGG | + | tig0022412:57664-57683 | Msa1399930:intron | 30.0% | |
| ! | AAACATTTTCTCTCCACAAT+GGG | + | tig0022412:57720-57739 | Msa1399930:intron | 30.0% |
| ! | CTTTTCTCTTAGACTATGTT+TGG | + | tig0022412:58074-58093 | Msa1399930:intron | 30.0% |
| TGTTTGGATTGACATTAAAG+TGG | + | tig0022412:58090-58109 | Msa1399930:intron | 30.0% | |
| ATGAATGAAATAGAGTGTGA+TGG | + | tig0022412:58172-58191 | Msa1399930:intron | 30.0% | |
| AATTGAGGGGAATTGAAAAT+TGG | - | tig0022412:58228-58247 | None:intergenic | 30.0% | |
| ! | TTTTCAATTCCCCTCAATTT+TGG | + | tig0022412:58229-58248 | Msa1399930:intron | 30.0% |
| ! | TTTCAATTCCCCTCAATTTT+GGG | + | tig0022412:58230-58249 | Msa1399930:intron | 30.0% |
| !! | TTTTGAGGACTAAAAGTTGA+AGG | - | tig0022412:59080-59099 | None:intergenic | 30.0% |
| !!! | CGAAGATGGAAATTTTTTTG+AGG | - | tig0022412:59095-59114 | None:intergenic | 30.0% |
| ! | AAAATTTCCATCTTCGCTTT+TGG | + | tig0022412:59099-59118 | Msa1399930:intron | 30.0% |
| TTATAGGGACTAAAAGTTGA+AGG | + | tig0022412:59422-59441 | Msa1399930:intron | 30.0% | |
| GAGAAATATCCAATTGTTGT+AGG | + | tig0022412:59734-59753 | Msa1399930:intron | 30.0% | |
| !! | TTTTGTTATGCGAGCTAAAT+GGG | - | tig0022412:59825-59844 | None:intergenic | 30.0% |
| !! | TTTTTGTTATGCGAGCTAAA+TGG | - | tig0022412:59826-59845 | None:intergenic | 30.0% |
| ! | GTTTACAATTTTGCTCCTAT+AGG | + | tig0022412:60117-60136 | Msa1399930:intron | 30.0% |
| TATTTATGGTTGATCCTAAC+GGG | - | tig0022412:60373-60392 | None:intergenic | 30.0% | |
| CTATTTATGGTTGATCCTAA+CGG | - | tig0022412:60374-60393 | None:intergenic | 30.0% | |
| AGGATCAACCATAAATAGAT+TGG | + | tig0022412:60376-60395 | Msa1399930:intron | 30.0% | |
| TGGAATGTCCAATCTATTTA+TGG | - | tig0022412:60387-60406 | None:intergenic | 30.0% | |
| AAATTCCTTGCACTTTGATA+TGG | + | tig0022412:60562-60581 | Msa1399930:intron | 30.0% | |
| ATTAAATGGTTCAAATGCAG+GGG | - | tig0022412:60591-60610 | None:intergenic | 30.0% | |
| CATTAAATGGTTCAAATGCA+GGG | - | tig0022412:60592-60611 | None:intergenic | 30.0% | |
| ACATTAAATGGTTCAAATGC+AGG | - | tig0022412:60593-60612 | None:intergenic | 30.0% | |
| CAAAAGCCATCAACATTAAA+TGG | - | tig0022412:60605-60624 | None:intergenic | 30.0% | |
| GTATTACAAGGTAAACCAAA+AGG | - | tig0022412:60839-60858 | None:intergenic | 30.0% | |
| !!! | AACTTGGTTTTGGTATTACA+AGG | - | tig0022412:60851-60870 | None:intergenic | 30.0% |
| TCAGAGTTACTTCATAAACT+TGG | - | tig0022412:60867-60886 | None:intergenic | 30.0% | |
| ATTTATGAAAGCAAGCTAGT+AGG | - | tig0022412:61075-61094 | None:intergenic | 30.0% | |
| ! | AACCTTCAGCTTTAATTCTT+TGG | + | tig0022412:61130-61149 | Msa1399930:intron | 30.0% |
| TTGGTTGTATATGTTTGGTT+AGG | - | tig0022412:61171-61190 | None:intergenic | 30.0% | |
| GAAGTTTGGTTGTATATGTT+TGG | - | tig0022412:61176-61195 | None:intergenic | 30.0% | |
| ATTCTTGAAGTTGTGATTCA+AGG | - | tig0022412:61353-61372 | None:intergenic | 30.0% | |
| TCACAACTTCAAGAATTAGA+CGG | + | tig0022412:61357-61376 | Msa1399930:CDS | 30.0% | |
| GATTACTTTGATGTGATTAC+AGG | + | tig0022412:55204-55223 | Msa1399930:CDS | 30.0% | |
| ! | GGATATCAAACCATTTTACT+TGG | + | tig0022412:61497-61516 | Msa1399930:CDS | 30.0% |
| TTAGTAGGACCAAAATATGA+TGG | + | tig0022412:61668-61687 | Msa1399930:CDS | 30.0% | |
| TAGTAGGACCAAAATATGAT+GGG | + | tig0022412:61669-61688 | Msa1399930:CDS | 30.0% | |
| ! | AGGTATTTCCCATCATATTT+TGG | - | tig0022412:61680-61699 | None:intergenic | 30.0% |
| AAATGTCGGAATCACAATAT+TGG | - | tig0022412:61756-61775 | None:intergenic | 30.0% | |
| CATGAATTCAACCTTATTGA+CGG | + | tig0022412:61935-61954 | Msa1399930:CDS | 30.0% | |
| GATGATATTTCAGACTTTAG+TGG | + | tig0022412:62074-62093 | Msa1399930:intron | 30.0% | |
| ATTATATTCCATAGGCTTGA+TGG | - | tig0022412:62151-62170 | None:intergenic | 30.0% | |
| AAGAAGCGATTATATTCCAT+AGG | - | tig0022412:62159-62178 | None:intergenic | 30.0% | |
| ! | TGACTAAACATGTCGATTAA+GGG | - | tig0022412:62288-62307 | None:intergenic | 30.0% |
| ! | TTGACTAAACATGTCGATTA+AGG | - | tig0022412:62289-62308 | None:intergenic | 30.0% |
| TCAACAATTTGTCACCAATT+TGG | - | tig0022412:62461-62480 | None:intergenic | 30.0% | |
| GTTGAAGAAACCAATATCTA+AGG | + | tig0022412:62476-62495 | Msa1399930:CDS | 30.0% | |
| ! | TCTAAGGTCAATTTAGAGAA+TGG | + | tig0022412:62492-62511 | Msa1399930:CDS | 30.0% |
| ATGTTTGAGCCAATTGAAAA+TGG | + | tig0022412:62516-62535 | Msa1399930:CDS | 30.0% | |
| TGTTTGAGCCAATTGAAAAT+GGG | + | tig0022412:62517-62536 | Msa1399930:CDS | 30.0% | |
| ! | TTAAAGCATTATTGGTGTGA+GGG | - | tig0022412:62700-62719 | None:intergenic | 30.0% |
| ! | ATTAAAGCATTATTGGTGTG+AGG | - | tig0022412:62701-62720 | None:intergenic | 30.0% |
| ATTCTTGAAGTTGCGATTCA+AGG | - | tig0022412:55158-55177 | None:intergenic | 35.0% | |
| TCGCAACTTCAAGAATTAGA+CGG | + | tig0022412:55162-55181 | Msa1399930:CDS | 35.0% | |
| ! | ATCATTTGGAGCACTTAACA+TGG | - | tig0022412:55256-55275 | None:intergenic | 35.0% |
| AGTGGACGTTGTTTATCATT+TGG | - | tig0022412:55270-55289 | None:intergenic | 35.0% | |
| GGACAATGTTCCAAGTAAAA+GGG | - | tig0022412:55315-55334 | None:intergenic | 35.0% | |
| TGGACAATGTTCCAAGTAAA+AGG | - | tig0022412:55316-55335 | None:intergenic | 35.0% | |
| ATTAACGGTTGAACTTATGC+AGG | + | tig0022412:55454-55473 | Msa1399930:intron | 35.0% | |
| ! | AGGTATTTCCCATCGTATTT+TGG | - | tig0022412:55525-55544 | None:intergenic | 35.0% |
| ATGTCTTTATGTCAAACGTG+GGG | - | tig0022412:55614-55633 | None:intergenic | 35.0% | |
| GATGTCTTTATGTCAAACGT+GGG | - | tig0022412:55615-55634 | None:intergenic | 35.0% | |
| TGATGTCTTTATGTCAAACG+TGG | - | tig0022412:55616-55635 | None:intergenic | 35.0% | |
| TTGTAACCAGGAAGATAAGT+AGG | - | tig0022412:55729-55748 | None:intergenic | 35.0% | |
| TTCAAGAACCAAGATACAGA+AGG | + | tig0022412:55750-55769 | Msa1399930:CDS | 35.0% | |
| TCAAGAACCAAGATACAGAA+GGG | + | tig0022412:55751-55770 | Msa1399930:CDS | 35.0% | |
| TGGTGTTTGTGCAAATAATC+CGG | + | tig0022412:55803-55822 | Msa1399930:CDS | 35.0% | |
| !! | TTGGTGATGATCAATGTTCT+AGG | + | tig0022412:55910-55929 | Msa1399930:intron | 35.0% |
| AGAAAACGGCTATATTCCAT+GGG | - | tig0022412:56004-56023 | None:intergenic | 35.0% | |
| TAGAAAACGGCTATATTCCA+TGG | - | tig0022412:56005-56024 | None:intergenic | 35.0% | |
| ATTCAAAACTGGCAGCAAAA+TGG | + | tig0022412:56071-56090 | Msa1399930:CDS | 35.0% | |
| TTCAAAACTGGCAGCAAAAT+GGG | + | tig0022412:56072-56091 | Msa1399930:CDS | 35.0% | |
| GATATCTTTAGTCAATCCTC+TGG | + | tig0022412:56139-56158 | Msa1399930:CDS | 35.0% | |
| ! | TTCTTATATTTGAGACCGGA+GGG | - | tig0022412:56400-56419 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | - | tig0022412:56399-56418 | None:intergenic | 35.0% |
| ! | TTTCTTATATTTGAGACCGG+AGG | + | tig0022412:56399-56418 | Msa1399930:intron | 35.0% |
| ! | TTCTTATATTTGAGACCGGA+GGG | + | tig0022412:56400-56419 | Msa1399930:intron | 35.0% |
| TTGCTTATATATACTCCCTC+CGG | - | tig0022412:56418-56437 | None:intergenic | 35.0% | |
| ATCAACTGAAGAATCTGTAC+CGG | - | tig0022412:56492-56511 | None:intergenic | 35.0% | |
| GTTTGAGCCTATTGAAAATG+GGG | + | tig0022412:56604-56623 | Msa1399930:CDS | 35.0% | |
| !! | TATACCTTTTGAGAGCTTCT+TGG | - | tig0022412:56637-56656 | None:intergenic | 35.0% |
| GTGGATTTGTGTCTATATCA+AGG | - | tig0022412:56849-56868 | None:intergenic | 35.0% | |
| AGTATTCATGAACAACGAGT+GGG | - | tig0022412:56871-56890 | None:intergenic | 35.0% | |
| ! | TAAGTCCCAAAACTAGCTTA+AGG | - | tig0022412:56910-56929 | None:intergenic | 35.0% |
| ! | GTTCTCGGAAAATTGTTTCT+TGG | - | tig0022412:57299-57318 | None:intergenic | 35.0% |
| TGGGTAGTTGACAAATAAGT+TGG | - | tig0022412:57347-57366 | None:intergenic | 35.0% | |
| !! | TGTTTGGTGCTTATAGAGAA+GGG | - | tig0022412:57705-57724 | None:intergenic | 35.0% |
| !! | ATGTTTGGTGCTTATAGAGA+AGG | - | tig0022412:57706-57725 | None:intergenic | 35.0% |
| CATTGTGGAGAGAAAATGTT+TGG | - | tig0022412:57721-57740 | None:intergenic | 35.0% | |
| ! | CAAACATTTTCTCTCCACAA+TGG | + | tig0022412:57719-57738 | Msa1399930:intron | 35.0% |
| ! | AACATTTTCTCTCCACAATG+GGG | + | tig0022412:57721-57740 | Msa1399930:intron | 35.0% |
| GTGCTTCATCTATTTAGCAT+CGG | - | tig0022412:57760-57779 | None:intergenic | 35.0% | |
| ! | TTTAGAGCATGAACAATGGT+GGG | - | tig0022412:57782-57801 | None:intergenic | 35.0% |
| ! | ATTTAGAGCATGAACAATGG+TGG | - | tig0022412:57783-57802 | None:intergenic | 35.0% |
| ! | ACCATTGTTCATGCTCTAAA+TGG | + | tig0022412:57782-57801 | Msa1399930:intron | 35.0% |
| !!! | ACTTGTTGTGACGTTTTCAT+AGG | - | tig0022412:57841-57860 | None:intergenic | 35.0% |
| TGACGCCATTGCTAAATTAT+GGG | - | tig0022412:57882-57901 | None:intergenic | 35.0% | |
| TTGACGCCATTGCTAAATTA+TGG | - | tig0022412:57883-57902 | None:intergenic | 35.0% | |
| TTGGATTGACATTAAAGTGG+TGG | + | tig0022412:58093-58112 | Msa1399930:intron | 35.0% | |
| ! | TTCAATTCCCCTCAATTTTG+GGG | + | tig0022412:58231-58250 | Msa1399930:intron | 35.0% |
| TCCATAAACCCCAAAATTGA+GGG | - | tig0022412:58242-58261 | None:intergenic | 35.0% | |
| TTCCATAAACCCCAAAATTG+AGG | - | tig0022412:58243-58262 | None:intergenic | 35.0% | |
| AAAGTTTGAACCCTGATCAA+GGG | - | tig0022412:58689-58708 | None:intergenic | 35.0% | |
| AAAAGTTTGAACCCTGATCA+AGG | - | tig0022412:58690-58709 | None:intergenic | 35.0% | |
| ! | TTTTTCCTCAAGTAGTCTAG+TGG | + | tig0022412:58765-58784 | Msa1399930:intron | 35.0% |
| ACGATGCACTGTAATATGTA+GGG | - | tig0022412:58849-58868 | None:intergenic | 35.0% | |
| ! | TTGCTCCCTCTAATTTTTCT+AGG | + | tig0022412:58991-59010 | Msa1399930:intron | 35.0% |
| ! | TGCTCCCTCTAATTTTTCTA+GGG | + | tig0022412:58992-59011 | Msa1399930:intron | 35.0% |
| GAGGGACTAAAATGAAAAGT+TGG | - | tig0022412:59454-59473 | None:intergenic | 35.0% | |
| AAAATAGGGACCAAAAGTAG+TGG | + | tig0022412:59390-59409 | Msa1399930:intron | 35.0% | |
| !!! | AAGTTGCTTTTTTGCCTCAA+TGG | + | tig0022412:59647-59666 | Msa1399930:intron | 35.0% |
| TATTGTGTTATGCTCCATTG+AGG | - | tig0022412:59664-59683 | None:intergenic | 35.0% | |
| TCTTTAGGCCATATATCTCA+AGG | - | tig0022412:59716-59735 | None:intergenic | 35.0% | |
| CTAAAAGACCCTACAACAAT+TGG | - | tig0022412:59746-59765 | None:intergenic | 35.0% | |
| TCTAAAAATCAACTCGATCC+CGG | - | tig0022412:60302-60321 | None:intergenic | 35.0% | |
| !! | TAACGGGCTTTGAACTTTAA+CGG | - | tig0022412:60357-60376 | None:intergenic | 35.0% |
| TTAAATGGTTCAAATGCAGG+GGG | - | tig0022412:60590-60609 | None:intergenic | 35.0% | |
| TTTAGATAGCATTGCATACG+AGG | - | tig0022412:61001-61020 | None:intergenic | 35.0% | |
| TGCCAAAGAATTAAAGCTGA+AGG | - | tig0022412:61135-61154 | None:intergenic | 35.0% | |
| TGATTGTGTTCTGTCCATTA+TGG | - | tig0022412:61226-61245 | None:intergenic | 35.0% | |
| TATAGTCACCAAGTTTCCAT+AGG | - | tig0022412:61274-61293 | None:intergenic | 35.0% | |
| !! | GTGACTATACTAAGTATCGA+TGG | + | tig0022412:61285-61304 | Msa1399930:CDS | 35.0% |
| !! | ACTATACTAAGTATCGATGG+TGG | + | tig0022412:61288-61307 | Msa1399930:CDS | 35.0% |
| !! | AGTGGACGCTTTTTATCATT+CGG | - | tig0022412:61465-61484 | None:intergenic | 35.0% |
| ATATCCTTAGCAGCAAAAAG+TGG | - | tig0022412:61483-61502 | None:intergenic | 35.0% | |
| GATATACGTACTTGTGTTGT+GGG | - | tig0022412:61542-61561 | None:intergenic | 35.0% | |
| AGATATACGTACTTGTGTTG+TGG | - | tig0022412:61543-61562 | None:intergenic | 35.0% | |
| AATACCTTCATGAAGTGGTA+AGG | + | tig0022412:61693-61712 | Msa1399930:CDS | 35.0% | |
| ATACCTTCATGAAGTGGTAA+GGG | + | tig0022412:61694-61713 | Msa1399930:CDS | 35.0% | |
| TTCAAGAACCAAGATACAGA+AGG | + | tig0022412:55750-55769 | Msa1399930:CDS | 35.0% | |
| ! | TCGCTTCTTGATAATATCAC+TGG | + | tig0022412:62170-62189 | Msa1399930:CDS | 35.0% |
| ! | CGCTTCTTGATAATATCACT+GGG | + | tig0022412:62171-62190 | Msa1399930:CDS | 35.0% |
| ! | TTGATAATATCACTGGGAAC+TGG | + | tig0022412:62177-62196 | Msa1399930:CDS | 35.0% |
| TGATAATATCACTGGGAACT+GGG | + | tig0022412:62178-62197 | Msa1399930:CDS | 35.0% | |
| TAGTCAATCATCAGCTGATA+TGG | + | tig0022412:62302-62321 | Msa1399930:CDS | 35.0% | |
| ACATAATTACCTACGGATAC+AGG | + | tig0022412:62368-62387 | Msa1399930:intron | 35.0% | |
| GATACAGGATGATACATTGA+CGG | + | tig0022412:62383-62402 | Msa1399930:intron | 35.0% | |
| ATACAGGATGATACATTGAC+GGG | + | tig0022412:62384-62403 | Msa1399930:intron | 35.0% | |
| GTTTGAGCCAATTGAAAATG+GGG | + | tig0022412:62518-62537 | Msa1399930:CDS | 35.0% | |
| ! | TTAGTCTCCCCATTTTCAAT+TGG | - | tig0022412:62528-62547 | None:intergenic | 35.0% |
| !! | TTTACCTTTTGAGAGCTTCT+TGG | - | tig0022412:62551-62570 | None:intergenic | 35.0% |
| !!! | CCTCTCTTGAGAAAGTATTT+TGG | - | tig0022412:62657-62676 | None:intergenic | 35.0% |
| CCAAAATACTTTCTCAAGAG+AGG | + | tig0022412:62654-62673 | Msa1399930:CDS | 35.0% | |
| AAATACTTTCTCAAGAGAGG+AGG | + | tig0022412:62657-62676 | Msa1399930:CDS | 35.0% | |
| ! | TAAAGCATTATTGGTGTGAG+GGG | - | tig0022412:62699-62718 | None:intergenic | 35.0% |
| CTAAGAATTTGCAAGCAATG+AGG | - | tig0022412:62738-62757 | None:intergenic | 35.0% | |
| GTCACTAAGTTTCCATAGGT+GGG | - | tig0022412:55075-55094 | None:intergenic | 40.0% | |
| AGTCACTAAGTTTCCATAGG+TGG | - | tig0022412:55076-55095 | None:intergenic | 40.0% | |
| !! | GTGACTATTCTAAGCATCGA+CGG | + | tig0022412:55090-55109 | Msa1399930:CDS | 40.0% |
| AAGGAACTCGAGAATAGTTG+CGG | - | tig0022412:55139-55158 | None:intergenic | 40.0% | |
| AATTAGACGGTGAATCTGCT+AGG | + | tig0022412:55175-55194 | Msa1399930:CDS | 40.0% | |
| GTGATTACAGGAACAAGTAC+AGG | + | tig0022412:55216-55235 | Msa1399930:intron | 40.0% | |
| ATTACAGGAACAAGTACAGG+TGG | + | tig0022412:55219-55238 | Msa1399930:intron | 40.0% | |
| ATATCCTTGGCAGCAAAAAG+TGG | - | tig0022412:55288-55307 | None:intergenic | 40.0% | |
| GTAAAAGGGCTTGATATCCT+TGG | - | tig0022412:55301-55320 | None:intergenic | 40.0% | |
| ! | GGATATCAAGCCCTTTTACT+TGG | + | tig0022412:55302-55321 | Msa1399930:CDS | 40.0% |
| TTAACGGGACCAAAATACGA+TGG | + | tig0022412:55513-55532 | Msa1399930:CDS | 40.0% | |
| TAACGGGACCAAAATACGAT+GGG | + | tig0022412:55514-55533 | Msa1399930:CDS | 40.0% | |
| AATACCTACACAGTGTGGTT+AGG | + | tig0022412:55538-55557 | Msa1399930:CDS | 40.0% | |
| ATACCTACACAGTGTGGTTA+GGG | + | tig0022412:55539-55558 | Msa1399930:CDS | 40.0% | |
| AAACGTGGGGATCACAATAT+TGG | - | tig0022412:55601-55620 | None:intergenic | 40.0% | |
| TGGTTCTTGAAGTTGTAACC+AGG | - | tig0022412:55741-55760 | None:intergenic | 40.0% | |
| ! | CTTTTATGCCATCAAACCCA+TGG | + | tig0022412:55985-56004 | Msa1399930:CDS | 40.0% |
| GCTATATTCCATGGGTTTGA+TGG | - | tig0022412:55996-56015 | None:intergenic | 40.0% | |
| CTAATAATCTCATTGGGCAC+TGG | + | tig0022412:56022-56041 | Msa1399930:CDS | 40.0% | |
| TCAAAACTGGCAGCAAAATG+GGG | + | tig0022412:56073-56092 | Msa1399930:CDS | 40.0% | |
| ! | CAAAATGGGGTCTTTTGGAT+TGG | + | tig0022412:56086-56105 | Msa1399930:CDS | 40.0% |
| !!! | CTTTTGGATTGGTTAACCCA+CGG | + | tig0022412:56097-56116 | Msa1399930:CDS | 40.0% |
| ! | TAGTCAATCCTCTGGAGATA+TGG | + | tig0022412:56147-56166 | Msa1399930:CDS | 40.0% |
| GAAATCAACCATATCTCCAG+AGG | - | tig0022412:56158-56177 | None:intergenic | 40.0% | |
| CTTGAGTAACAGTAGCAAGA+TGG | - | tig0022412:56180-56199 | None:intergenic | 40.0% | |
| ATGCAGGATGATACATTGAC+CGG | + | tig0022412:56470-56489 | Msa1399930:intron | 40.0% | |
| ! | TTGGTCTCCCCATTTTCAAT+AGG | - | tig0022412:56614-56633 | None:intergenic | 40.0% |
| !! | TCAAGGTCTTGTTAGTGTGA+GGG | - | tig0022412:56832-56851 | None:intergenic | 40.0% |
| !! | ATCAAGGTCTTGTTAGTGTG+AGG | - | tig0022412:56833-56852 | None:intergenic | 40.0% |
| GAGTATTCATGAACAACGAG+TGG | - | tig0022412:56872-56891 | None:intergenic | 40.0% | |
| ATCAAATCCAGACAAGTAGC+TGG | - | tig0022412:57148-57167 | None:intergenic | 40.0% | |
| TTGTAAGGTCGTGATGTTCT+CGG | - | tig0022412:57314-57333 | None:intergenic | 40.0% | |
| TATGTGGAACCGTCATATCT+AGG | - | tig0022412:57390-57409 | None:intergenic | 40.0% | |
| ! | TTGGAGTGCTCTATTGTAGA+TGG | - | tig0022412:57451-57470 | None:intergenic | 40.0% |
| !!! | TTTTGTTTTAGGTGCTGGGT+TGG | - | tig0022412:57558-57577 | None:intergenic | 40.0% |
| ! | ACATTTTCTCTCCACAATGG+GGG | + | tig0022412:57722-57741 | Msa1399930:intron | 40.0% |
| ATAAATAAGCACCCCCATTG+TGG | - | tig0022412:57736-57755 | None:intergenic | 40.0% | |
| ! | GCCATTTAGAGCATGAACAA+TGG | - | tig0022412:57786-57805 | None:intergenic | 40.0% |
| TGTCGCCCATAATTTAGCAA+TGG | + | tig0022412:57874-57893 | Msa1399930:intron | 40.0% | |
| ACGTGAGAGAAAAACTTGTG+AGG | - | tig0022412:58046-58065 | None:intergenic | 40.0% | |
| CCATAAACCCCAAAATTGAG+GGG | - | tig0022412:58241-58260 | None:intergenic | 40.0% | |
| TTGCGTAGAACCATAGATCA+AGG | + | tig0022412:58654-58673 | Msa1399930:intron | 40.0% | |
| AGAACCATAGATCAAGGTTG+CGG | + | tig0022412:58660-58679 | Msa1399930:intron | 40.0% | |
| CGATGCACTGTAATATGTAG+GGG | - | tig0022412:58848-58867 | None:intergenic | 40.0% | |
| GACGATGCACTGTAATATGT+AGG | - | tig0022412:58850-58869 | None:intergenic | 40.0% | |
| CTTTGTGAACGCAACTCAAT+TGG | - | tig0022412:58877-58896 | None:intergenic | 40.0% | |
| TAGGGAGTCCTTGAGATATA+TGG | + | tig0022412:59705-59724 | Msa1399930:intron | 40.0% | |
| !! | AAATGGGTTCCACGCTTTTT+AGG | - | tig0022412:59775-59794 | None:intergenic | 40.0% |
| ! | TAAAAAGCGTGGAACCCATT+TGG | + | tig0022412:59774-59793 | Msa1399930:intron | 40.0% |
| ! | AAAAAGCGTGGAACCCATTT+GGG | + | tig0022412:59775-59794 | Msa1399930:intron | 40.0% |
| TCGTACAGGTTATCCCAAAT+GGG | - | tig0022412:59791-59810 | None:intergenic | 40.0% | |
| GTTAAAGTTCAAAGCCCGTT+AGG | + | tig0022412:60356-60375 | Msa1399930:intron | 40.0% | |
| AGTAACTCTGAACCAGTCAT+TGG | + | tig0022412:60876-60895 | Msa1399930:intron | 40.0% | |
| ATATTATGTCGTCTCTGCCA+TGG | - | tig0022412:60903-60922 | None:intergenic | 40.0% | |
| ATTGCATACGAGGAAGAGTA+TGG | - | tig0022412:60991-61010 | None:intergenic | 40.0% | |
| !! | TGTTTGGTTAGGTTGATCTC+AGG | - | tig0022412:61160-61179 | None:intergenic | 40.0% |
| !! | ATACTAAGTATCGATGGTGG+CGG | + | tig0022412:61291-61310 | Msa1399930:CDS | 40.0% |
| AATTAGACGGTGAATCTGCT+AGG | + | tig0022412:55175-55194 | Msa1399930:CDS | 40.0% | |
| GTGATTACAGGAACAAGTAC+AGG | + | tig0022412:55216-55235 | Msa1399930:intron | 40.0% | |
| ATTACAGGAACAAGTACAGG+TGG | + | tig0022412:55219-55238 | Msa1399930:intron | 40.0% | |
| !! | GGAGAGTGTTCCAAGTAAAA+TGG | - | tig0022412:61510-61529 | None:intergenic | 40.0% |
| TTGTGTTGTGGGAAGATCTT+AGG | - | tig0022412:61531-61550 | None:intergenic | 40.0% | |
| TGGGAAATACCTTCATGAAG+TGG | + | tig0022412:61688-61707 | Msa1399930:CDS | 40.0% | |
| TTGTAGCCTGGAAGATATGT+AGG | - | tig0022412:61884-61903 | None:intergenic | 40.0% | |
| TGGTTCTTGAAATTGTAGCC+TGG | - | tig0022412:61896-61915 | None:intergenic | 40.0% | |
| GAATTCAACCTTATTGACGG+CGG | + | tig0022412:61938-61957 | Msa1399930:CDS | 40.0% | |
| ATGCGAAAATGGCAGCAAAA+TGG | + | tig0022412:62226-62245 | Msa1399930:CDS | 40.0% | |
| TGCGAAAATGGCAGCAAAAT+GGG | + | tig0022412:62227-62246 | Msa1399930:CDS | 40.0% | |
| ! | GGTTGATTTCCATCTTGCTA+CGG | + | tig0022412:56168-56187 | Msa1399930:intron | 40.0% |
| ATGTATCATCCTGTATCCGT+AGG | - | tig0022412:62380-62399 | None:intergenic | 40.0% | |
| CTAACCAAGAAGCTCTCAAA+AGG | + | tig0022412:62544-62563 | Msa1399930:CDS | 40.0% | |
| ACTAAGTTTCCATAGGTGGG+AGG | - | tig0022412:55072-55091 | None:intergenic | 45.0% | |
| !! | ACTATTCTAAGCATCGACGG+TGG | + | tig0022412:55093-55112 | Msa1399930:CDS | 45.0% |
| AGGAACTCGAGAATAGTTGC+GGG | - | tig0022412:55138-55157 | None:intergenic | 45.0% | |
| TGTGGCTGCATAAGTGCAAT+TGG | - | tig0022412:55390-55409 | None:intergenic | 45.0% | |
| AACTTATGCAGGCACTTGCT+GGG | + | tig0022412:55465-55484 | Msa1399930:intron | 45.0% | |
| TGGGAAATACCTACACAGTG+TGG | + | tig0022412:55533-55552 | Msa1399930:CDS | 45.0% | |
| AAGATAAGTAGGAGCAGCAG+AGG | - | tig0022412:55718-55737 | None:intergenic | 45.0% | |
| GTACAGTCCCTTCTGTATCT+TGG | - | tig0022412:55761-55780 | None:intergenic | 45.0% | |
| CGTGAGTTCAACCTCATTGA+TGG | + | tig0022412:55780-55799 | Msa1399930:CDS | 45.0% | |
| GAGTTCAACCTCATTGATGG+TGG | + | tig0022412:55783-55802 | Msa1399930:CDS | 45.0% | |
| CACAAACACCACCATCAATG+AGG | - | tig0022412:55794-55813 | None:intergenic | 45.0% | |
| !! | CCTTTTGAGAGCTTCTTGGT+TGG | - | tig0022412:56633-56652 | None:intergenic | 45.0% |
| CCAACCAAGAAGCTCTCAAA+AGG | + | tig0022412:56630-56649 | Msa1399930:CDS | 45.0% | |
| !! | CAAGGTCTTGTTAGTGTGAG+GGG | - | tig0022412:56831-56850 | None:intergenic | 45.0% |
| ATTCATGAACAACGAGTGGG+TGG | - | tig0022412:56868-56887 | None:intergenic | 45.0% | |
| CTCTAAACCAGCTACTTGTC+TGG | + | tig0022412:57138-57157 | Msa1399930:intron | 45.0% | |
| ! | TTGGTGCTTATAGAGAAGGG+TGG | - | tig0022412:57702-57721 | None:intergenic | 45.0% |
| !!! | CCCCTCAATTTTGGGGTTTA+TGG | + | tig0022412:58238-58257 | Msa1399930:intron | 45.0% |
| GATCTGGCCTCACAATATCA+CGG | + | tig0022412:58366-58385 | Msa1399930:intron | 45.0% | |
| TTTGCCTCCGTGATATTGTG+AGG | - | tig0022412:58376-58395 | None:intergenic | 45.0% | |
| TAGCATGATACCCGTGCATA+CGG | + | tig0022412:58588-58607 | Msa1399930:intron | 45.0% | |
| !!! | AGCACGTTGCGCTCTTTTTT+TGG | + | tig0022412:58618-58637 | Msa1399930:intron | 45.0% |
| GTTTCCGCAACCTTGATCTA+TGG | - | tig0022412:58667-58686 | None:intergenic | 45.0% | |
| GGTAAATAACCGAGAATCCG+AGG | + | tig0022412:58810-58829 | Msa1399930:intron | 45.0% | |
| ATGTTCGAACCTCGGATTCT+CGG | - | tig0022412:58822-58841 | None:intergenic | 45.0% | |
| TGTGAACGCAACTCAATTGG+TGG | - | tig0022412:58874-58893 | None:intergenic | 45.0% | |
| !!! | GTTCCACGCTTTTTAGGACT+GGG | - | tig0022412:59769-59788 | None:intergenic | 45.0% |
| CTCGTACAGGTTATCCCAAA+TGG | - | tig0022412:59792-59811 | None:intergenic | 45.0% | |
| ! | ATACGAGGAAGAGTATGGCA+TGG | - | tig0022412:60986-61005 | None:intergenic | 45.0% |
| TAGGATGTAGCTGGTGTGTT+TGG | - | tig0022412:61056-61075 | None:intergenic | 45.0% | |
| GTCACCAAGTTTCCATAGGT+GGG | - | tig0022412:61270-61289 | None:intergenic | 45.0% | |
| AGTCACCAAGTTTCCATAGG+TGG | - | tig0022412:61271-61290 | None:intergenic | 45.0% | |
| GTTGTGATTCAAGGAACTCG+AGG | - | tig0022412:61344-61363 | None:intergenic | 45.0% | |
| ! | AACTCATGCAGGGACTTGTT+GGG | + | tig0022412:61620-61639 | Msa1399930:intron | 45.0% |
| TCTCCCTTACCACTTCATGA+AGG | - | tig0022412:61700-61719 | None:intergenic | 45.0% | |
| TGAAGTGGTAAGGGAGAAGT+TGG | + | tig0022412:61703-61722 | Msa1399930:CDS | 45.0% | |
| GAAGTGGTAAGGGAGAAGTT+GGG | + | tig0022412:61704-61723 | Msa1399930:CDS | 45.0% | |
| AAGTGGTAAGGGAGAAGTTG+GGG | + | tig0022412:61705-61724 | Msa1399930:CDS | 45.0% | |
| GATCAAGAAAACCCCTTGCA+TGG | + | tig0022412:61817-61836 | Msa1399930:intron | 45.0% | |
| AAGATATGTAGGTGCAGCAG+AGG | - | tig0022412:61873-61892 | None:intergenic | 45.0% | |
| GTGTGTTGCCTTCTGTATCT+TGG | - | tig0022412:61916-61935 | None:intergenic | 45.0% | |
| CGGTGTTTGTGCAAATAACC+CGG | + | tig0022412:61958-61977 | Msa1399930:CDS | 45.0% | |
| CTTCTATGCCATCAAGCCTA+TGG | + | tig0022412:62140-62159 | Msa1399930:CDS | 45.0% | |
| GCGAAAATGGCAGCAAAATG+GGG | + | tig0022412:62228-62247 | Msa1399930:CDS | 45.0% | |
| !! | CTGCTGGATTGGTTAACTCA+CGG | + | tig0022412:62252-62271 | Msa1399930:CDS | 45.0% |
| TGTGAGGGGATTTCAACTCT+CGG | - | tig0022412:62685-62704 | None:intergenic | 45.0% | |
| !!! | ATAAATATAATTTGTATTAA+CGG | + | tig0022412:55439-55458 | Msa1399930:intron | 5.0% |
| !! | TTTATTAATAATGAATTAAT+AGG | - | tig0022412:57040-57059 | None:intergenic | 5.0% |
| !!! | TATATTTTTTTTTGTAATTT+TGG | - | tig0022412:58467-58486 | None:intergenic | 5.0% |
| !!! | AAAATTTTTAATAGAAAAAT+GGG | - | tig0022412:59510-59529 | None:intergenic | 5.0% |
| !!! | TAAAATTTTTAATAGAAAAA+TGG | - | tig0022412:59511-59530 | None:intergenic | 5.0% |
| CAAATTCAGCCTCCCACCTA+TGG | + | tig0022412:55060-55079 | Msa1399930:CDS | 50.0% | |
| !! | ATTCTAAGCATCGACGGTGG+TGG | + | tig0022412:55096-55115 | Msa1399930:CDS | 50.0% |
| ! | CATCGACGGTGGTGGTATTA+GGG | + | tig0022412:55104-55123 | Msa1399930:CDS | 50.0% |
| ! | ATCGACGGTGGTGGTATTAG+GGG | + | tig0022412:55105-55124 | Msa1399930:CDS | 50.0% |
| !!! | ACGTCCACTTTTTGCTGCCA+AGG | + | tig0022412:55281-55300 | Msa1399930:CDS | 50.0% |
| GAACTTATGCAGGCACTTGC+TGG | + | tig0022412:55464-55483 | Msa1399930:intron | 50.0% | |
| TCTCCCTAACCACACTGTGT+AGG | - | tig0022412:55545-55564 | None:intergenic | 50.0% | |
| AGTGTGGTTAGGGAGAAGCT+TGG | + | tig0022412:55549-55568 | Msa1399930:CDS | 50.0% | |
| GTGTGGTTAGGGAGAAGCTT+GGG | + | tig0022412:55550-55569 | Msa1399930:CDS | 50.0% | |
| TGTGGTTAGGGAGAAGCTTG+GGG | + | tig0022412:55551-55570 | Msa1399930:CDS | 50.0% | |
| GATCAAGAAAGCCCCTTGCA+TGG | + | tig0022412:55662-55681 | Msa1399930:intron | 50.0% | |
| AGAGTCGAGCATCCATGCAA+GGG | - | tig0022412:55677-55696 | None:intergenic | 50.0% | |
| TTGCATGGATGCTCGACTCT+CGG | + | tig0022412:55677-55696 | Msa1399930:CDS | 50.0% | |
| GCTGCTCCTACTTATCTTCC+TGG | + | tig0022412:55720-55739 | Msa1399930:CDS | 50.0% | |
| ! | GGCAGCAAAATGGGGTCTTT+TGG | + | tig0022412:56081-56100 | Msa1399930:CDS | 50.0% |
| !! | TTGGATTGGTTAACCCACGG+TGG | + | tig0022412:56100-56119 | Msa1399930:CDS | 50.0% |
| TAAGGGAGTTGAACCACCGT+GGG | - | tig0022412:56116-56135 | None:intergenic | 50.0% | |
| TTAAGGGAGTTGAACCACCG+TGG | - | tig0022412:56117-56136 | None:intergenic | 50.0% | |
| CTGAAACAGCGGAGTAAAGG+GGG | - | tig0022412:58341-58360 | None:intergenic | 50.0% | |
| CCTGAAACAGCGGAGTAAAG+GGG | - | tig0022412:58342-58361 | None:intergenic | 50.0% | |
| CCCTGAAACAGCGGAGTAAA+GGG | - | tig0022412:58343-58362 | None:intergenic | 50.0% | |
| ! | CCCTTTACTCCGCTGTTTCA+GGG | + | tig0022412:58340-58359 | Msa1399930:intron | 50.0% |
| ! | CCTTTACTCCGCTGTTTCAG+GGG | + | tig0022412:58341-58360 | Msa1399930:intron | 50.0% |
| ATGATACCCGTGCATACGGA+CGG | + | tig0022412:58592-58611 | Msa1399930:intron | 50.0% | |
| GTTGCGGAAACCCTTGATCA+GGG | + | tig0022412:58676-58695 | Msa1399930:intron | 50.0% | |
| GCTAGCCACTAGACTACTTG+AGG | - | tig0022412:58773-58792 | None:intergenic | 50.0% | |
| AGAGGGACCAAAAGCGAAGA+TGG | - | tig0022412:59109-59128 | None:intergenic | 50.0% | |
| TAGCCCAGTCCTAAAAAGCG+TGG | + | tig0022412:59763-59782 | Msa1399930:intron | 50.0% | |
| !!! | GGTTCCACGCTTTTTAGGAC+TGG | - | tig0022412:59770-59789 | None:intergenic | 50.0% |
| TTTAGCCCACGACCCGTATA+AGG | + | tig0022412:60276-60295 | Msa1399930:intron | 50.0% | |
| ! | AACTCGATCCCGGCCTTATA+CGG | - | tig0022412:60292-60311 | None:intergenic | 50.0% |
| GGGCTCCATATCAAAGTGCA+AGG | - | tig0022412:60570-60589 | None:intergenic | 50.0% | |
| CTGAACCAGTCATTGGACCA+TGG | + | tig0022412:60883-60902 | Msa1399930:intron | 50.0% | |
| CGCGCATCTTTGACGAAAGT+TGG | + | tig0022412:60938-60957 | Msa1399930:intron | 50.0% | |
| GCAAGCTAGTAGGATGTAGC+TGG | - | tig0022412:61065-61084 | None:intergenic | 50.0% | |
| ACCAAGTTTCCATAGGTGGG+AGG | - | tig0022412:61267-61286 | None:intergenic | 50.0% | |
| !! | TATCGATGGTGGCGGCATTA+GGG | + | tig0022412:61299-61318 | Msa1399930:CDS | 50.0% |
| AGGAACTCGAGGATAGTTGC+AGG | - | tig0022412:61333-61352 | None:intergenic | 50.0% | |
| !!! | GCGTCCACTTTTTGCTGCTA+AGG | + | tig0022412:61476-61495 | Msa1399930:CDS | 50.0% |
| GAACTCATGCAGGGACTTGT+TGG | + | tig0022412:61619-61638 | Msa1399930:intron | 50.0% | |
| !! | AGGGACTTGTTGGGATCAGT+GGG | + | tig0022412:61629-61648 | Msa1399930:intron | 50.0% |
| AGTGGTAAGGGAGAAGTTGG+GGG | + | tig0022412:61706-61725 | Msa1399930:CDS | 50.0% | |
| AGAGTCGAGCATCCATGCAA+GGG | - | tig0022412:55677-55696 | None:intergenic | 50.0% | |
| TTGCATGGATGCTCGACTCT+CGG | + | tig0022412:55677-55696 | Msa1399930:CDS | 50.0% | |
| GCTGCACCTACATATCTTCC+AGG | + | tig0022412:61875-61894 | Msa1399930:CDS | 50.0% | |
| CACAAACACCGCCGTCAATA+AGG | - | tig0022412:61949-61968 | None:intergenic | 50.0% | |
| CAAAATGGGGTCTGCTGGAT+TGG | + | tig0022412:62241-62260 | Msa1399930:CDS | 50.0% | |
| !! | CTGGATTGGTTAACTCACGG+TGG | + | tig0022412:62255-62274 | Msa1399930:CDS | 50.0% |
| CTCGAGTAACCGTAGCAAGA+TGG | - | tig0022412:62335-62354 | None:intergenic | 50.0% | |
| ! | GCATCGACGGTGGTGGTATT+AGG | + | tig0022412:55103-55122 | Msa1399930:CDS | 55.0% |
| GAGTCGAGCATCCATGCAAG+GGG | - | tig0022412:55676-55695 | None:intergenic | 55.0% | |
| GAGAGTCGAGCATCCATGCA+AGG | - | tig0022412:55678-55697 | None:intergenic | 55.0% | |
| ! | GGTGCTGGGTTGGAGAGATT+GGG | - | tig0022412:57548-57567 | None:intergenic | 55.0% |
| !! | AGGTGCTGGGTTGGAGAGAT+TGG | - | tig0022412:57549-57568 | None:intergenic | 55.0% |
| ! | CCCCTTTACTCCGCTGTTTC+AGG | + | tig0022412:58339-58358 | Msa1399930:intron | 55.0% |
| CCCCTGAAACAGCGGAGTAA+AGG | - | tig0022412:58344-58363 | None:intergenic | 55.0% | |
| CAGATCTGCCCCTGAAACAG+CGG | - | tig0022412:58352-58371 | None:intergenic | 55.0% | |
| CTGGCCTCACAATATCACGG+AGG | + | tig0022412:58369-58388 | Msa1399930:intron | 55.0% | |
| TGATACCCGTGCATACGGAC+GGG | + | tig0022412:58593-58612 | Msa1399930:intron | 55.0% | |
| GGTTGCGGAAACCCTTGATC+AGG | + | tig0022412:58675-58694 | Msa1399930:intron | 55.0% | |
| AGGGGTCGATGTTCGAACCT+CGG | - | tig0022412:58830-58849 | None:intergenic | 55.0% | |
| GGGATAACCTGTACGAGCCA+CGG | + | tig0022412:59795-59814 | Msa1399930:intron | 55.0% | |
| GGATAACCTGTACGAGCCAC+GGG | + | tig0022412:59796-59815 | Msa1399930:intron | 55.0% | |
| ! | ACTCGATCCCGGCCTTATAC+GGG | - | tig0022412:60291-60310 | None:intergenic | 55.0% |
| CTCTGCCATGGTCCAATGAC+TGG | - | tig0022412:60891-60910 | None:intergenic | 55.0% | |
| CAGATTCAGCCTCCCACCTA+TGG | + | tig0022412:61255-61274 | Msa1399930:CDS | 55.0% | |
| GCCTCCCACCTATGGAAACT+TGG | + | tig0022412:55068-55087 | Msa1399930:CDS | 55.0% | |
| !! | GTATCGATGGTGGCGGCATT+AGG | + | tig0022412:61298-61317 | Msa1399930:CDS | 55.0% |
| !! | ATCGATGGTGGCGGCATTAG+GGG | + | tig0022412:61300-61319 | Msa1399930:CDS | 55.0% |
| !! | CAGGGACTTGTTGGGATCAG+TGG | + | tig0022412:61628-61647 | Msa1399930:intron | 55.0% |
| !! | GGGACTTGTTGGGATCAGTG+GGG | + | tig0022412:61630-61649 | Msa1399930:intron | 55.0% |
| GAGTCGAGCATCCATGCAAG+GGG | - | tig0022412:55676-55695 | None:intergenic | 55.0% | |
| GAGAGTCGAGCATCCATGCA+AGG | - | tig0022412:55678-55697 | None:intergenic | 55.0% | |
| ! | ATGCAGGCACTTGCTGGGAC+TGG | + | tig0022412:55470-55489 | Msa1399930:intron | 60.0% |
| ! | AGGCACTTGCTGGGACTGGT+GGG | + | tig0022412:55474-55493 | Msa1399930:intron | 60.0% |
| ! | CGCTGTTTCAGGGGCAGATC+TGG | + | tig0022412:58350-58369 | Msa1399930:intron | 60.0% |
| TGCTCACCCGTCCGTATGCA+CGG | - | tig0022412:58602-58621 | None:intergenic | 60.0% | |
| !! | CGAGCTAAATGGGCTACCCG+TGG | - | tig0022412:59815-59834 | None:intergenic | 60.0% |
| GGCAGCAAAATGGGGTCTGC+TGG | + | tig0022412:62236-62255 | Msa1399930:CDS | 60.0% | |
| ! | CAGGCACTTGCTGGGACTGG+TGG | + | tig0022412:55473-55492 | Msa1399930:intron | 65.0% |
| ! | GGCACTTGCTGGGACTGGTG+GGG | + | tig0022412:55475-55494 | Msa1399930:intron | 65.0% |
| GCTCACCCGTCCGTATGCAC+GGG | - | tig0022412:58601-58620 | None:intergenic | 65.0% | |
| GCCCACGACCCGTATAAGGC+CGG | + | tig0022412:60280-60299 | Msa1399930:intron | 65.0% | |
| ! | CCCGGCCTTATACGGGTCGT+GGG | - | tig0022412:60284-60303 | None:intergenic | 65.0% |
| CCCACGACCCGTATAAGGCC+GGG | + | tig0022412:60281-60300 | Msa1399930:intron | 65.0% | |
| ! | TCCCGGCCTTATACGGGTCG+TGG | - | tig0022412:60285-60304 | None:intergenic | 65.0% |
| GGGCTACCCGTGGCTCGTAC+AGG | - | tig0022412:59805-59824 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022412 | gene | 55033 | 62762 | 55033 | ID=Msa1399930;Name=Msa1399930 |
| tig0022412 | mRNA | 55033 | 62762 | 55033 | ID=Msa1399930-mRNA-1;Parent=Msa1399930;Name=Msa1399930-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.16|0.07|1|0.41|0.07|13|38|686 |
| tig0022412 | exon | 55033 | 55231 | 55033 | ID=Msa1399930-mRNA-1:exon:17476;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 55238 | 55355 | 55238 | ID=Msa1399930-mRNA-1:exon:17477;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 55476 | 55605 | 55476 | ID=Msa1399930-mRNA-1:exon:17478;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 55663 | 55824 | 55663 | ID=Msa1399930-mRNA-1:exon:17479;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 55932 | 56168 | 55932 | ID=Msa1399930-mRNA-1:exon:17480;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 56527 | 56651 | 56527 | ID=Msa1399930-mRNA-1:exon:17481;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 61236 | 61426 | 61236 | ID=Msa1399930-mRNA-1:exon:17482;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 61433 | 61550 | 61433 | ID=Msa1399930-mRNA-1:exon:17483;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 61631 | 61760 | 61631 | ID=Msa1399930-mRNA-1:exon:17484;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 61818 | 61979 | 61818 | ID=Msa1399930-mRNA-1:exon:17485;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 62087 | 62323 | 62087 | ID=Msa1399930-mRNA-1:exon:17486;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 62390 | 62565 | 62390 | ID=Msa1399930-mRNA-1:exon:17487;Parent=Msa1399930-mRNA-1 |
| tig0022412 | exon | 62649 | 62762 | 62649 | ID=Msa1399930-mRNA-1:exon:17488;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 55033 | 55231 | 55033 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 55238 | 55355 | 55238 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 55476 | 55605 | 55476 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 55663 | 55824 | 55663 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 55932 | 56168 | 55932 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 56527 | 56651 | 56527 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 61236 | 61426 | 61236 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 61433 | 61550 | 61433 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 61631 | 61760 | 61631 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 61818 | 61979 | 61818 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 62087 | 62323 | 62087 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 62390 | 62565 | 62390 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | CDS | 62649 | 62724 | 62649 | ID=Msa1399930-mRNA-1:cds;Parent=Msa1399930-mRNA-1 |
| tig0022412 | three_prime_UTR | 62725 | 62762 | 62725 | ID=Msa1399930-mRNA-1:three_prime_utr;Parent=Msa1399930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
