AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0433680

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433680 MtrunA17_Chr3g0139471 98.460 844 9 1 1 840 1 844 0.0 1713
Msa0433680 MtrunA17_Chr4g0038901 33.520 713 407 16 18 718 12 669 4.94e-107 350
Msa0433680 MtrunA17_Chr5g0435291 26.415 212 142 2 42 253 46 243 3.77e-17 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0433680 AT5G11490.1 80.166 842 164 3 1 840 1 841 0.0 1397
Msa0433680 AT5G11490.2 80.215 839 163 3 1 837 1 838 0.0 1391
Msa0433680 AT5G11490.3 79.847 784 156 2 56 837 1 784 0.0 1304
Msa0433680 AT4G23460.1 36.093 604 362 12 18 616 12 596 3.85e-108 353
Msa0433680 AT4G11380.1 35.285 615 372 11 18 627 12 605 1.01e-105 347
Msa0433680 AT4G11380.2 35.932 590 359 10 43 627 52 627 4.41e-105 345
Msa0433680 AT4G23460.2 34.893 513 317 11 109 616 2 502 2.89e-83 284
Msa0433680 AT3G55480.2 30.556 144 98 1 45 188 49 190 2.13e-13 75.1
Msa0433680 AT3G55480.2 23.721 430 271 17 275 671 351 756 4.43e-13 73.9
Msa0433680 AT3G55480.1 23.721 430 271 17 275 671 223 628 2.87e-13 74.3

Find 240 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCGGCTTCTGCAGTTTC+TGG 0.097421 3_2:+86219254 Msa0433680:CDS
CAATCAGCTTTGTCCAAATT+TGG 0.125872 3_2:+86223311 Msa0433680:CDS
GAGTATTTGGTTGGGCCTTT+AGG 0.153079 3_2:+86215057 Msa0433680:CDS
TGTCTGCTTTACAAGAAATT+TGG 0.157651 3_2:+86216787 Msa0433680:CDS
AGTATGCACCTTTAAGTTTC+AGG 0.168431 3_2:-86223339 None:intergenic
TGGTTTGCCCTGAAACTTAA+AGG 0.191883 3_2:+86223331 Msa0433680:exon
GTTTCAGGGCAAACCAAATT+TGG 0.200113 3_2:-86223324 None:intergenic
ATCAAATGCTTCAACGTTTC+TGG 0.203616 3_2:-86215183 None:intergenic
GATTGCGCCGCGATTAAATT+TGG 0.205518 3_2:+86223664 Msa0433680:three_prime_UTR
AGTCGACAATAATGAAATTT+TGG 0.209614 3_2:+86223374 Msa0433680:three_prime_UTR
TGGAAAGTCTGGTTGAAAAT+TGG 0.212595 3_2:+86219640 Msa0433680:CDS
TTGATGTTGAAATGTGAATT+TGG 0.220256 3_2:+86223694 Msa0433680:three_prime_UTR
CTGCCTTAGCCTTAGGTTCT+TGG 0.226571 3_2:-86219560 None:intergenic
CCAGGATCCAGTACAGCTTT+TGG 0.231595 3_2:-86222642 None:intergenic
TATAATGCTCCTTCCTATAA+TGG 0.233272 3_2:+86222465 Msa0433680:CDS
CCTGCACTTGACTTTATCTA+TGG 0.262839 3_2:+86217511 Msa0433680:CDS
AGTATTTGGTTGGGCCTTTA+GGG 0.273406 3_2:+86215058 Msa0433680:CDS
TTCACAACCGCTTGCAGATT+TGG 0.280848 3_2:+86222506 Msa0433680:CDS
TTGGTTGGGCCTTTAGGGTC+AGG 0.291482 3_2:+86215063 Msa0433680:CDS
CTCTGAGGTGGTTGACTCTA+AGG 0.294624 3_2:-86216811 None:intergenic
ATTATAGGAAGGAGCATTAT+AGG 0.298629 3_2:-86222463 None:intergenic
CGAATTGATTCCCTTGCAAT+TGG 0.305678 3_2:-86219183 None:intergenic
GTTTGCTACGTGCAGCATTA+AGG 0.317331 3_2:+86217337 Msa0433680:intron
AATACTGAAACTGCTTGTTT+TGG 0.327010 3_2:-86220995 None:intergenic
CATATGATGGCTCGTTATAC+TGG 0.328980 3_2:-86218901 None:intergenic
CAAACCTCTGATAAGGATAT+TGG 0.329700 3_2:-86222693 None:intergenic
GGCGAACTTGGTGGAGTATT+TGG 0.333179 3_2:+86215044 Msa0433680:CDS
CCCAGTGCTTTCTGAGTCTC+GGG 0.337763 3_2:-86220729 None:intergenic
ATTGATGTTTCGTCTCTCTT+TGG 0.342308 3_2:+86214832 Msa0433680:CDS
TAGAAGCCTGTAATAAAATA+AGG 0.343419 3_2:-86220933 None:intergenic
AAAGATGATGTGAGAGATAC+TGG 0.345708 3_2:+86222426 Msa0433680:CDS
CAAGATTGTATTGCTGTTGT+AGG 0.357677 3_2:+86219516 Msa0433680:CDS
TAAAGAAATGGAGATAGATA+TGG 0.360957 3_2:+86223415 Msa0433680:three_prime_UTR
TTACAGCTACGGCAGCTTGC+TGG 0.364785 3_2:+86214736 Msa0433680:CDS
GGAAAGTCTGGTTGAAAATT+GGG 0.365049 3_2:+86219641 Msa0433680:CDS
TCTTCATCTTCCATCCTTGT+TGG 0.365176 3_2:+86214151 Msa0433680:five_prime_UTR
TGAAGGGGCAGACCCATTAT+AGG 0.369778 3_2:-86222478 None:intergenic
GCCTTTAGGGTCAGGGTTGA+AGG 0.371889 3_2:+86215071 Msa0433680:CDS
TCCCAGTGCTTTCTGAGTCT+CGG 0.372039 3_2:-86220730 None:intergenic
AGAATTGCATAAGATTGTTC+CGG 0.387819 3_2:-86218809 None:intergenic
CAAATTTGGACAAAGCTGAT+TGG 0.388207 3_2:-86223310 None:intergenic
CAATTGCAAGGGAATCAATT+CGG 0.388565 3_2:+86219184 Msa0433680:CDS
CAAGTCACAGATTAAAATAA+AGG 0.389674 3_2:+86223247 Msa0433680:CDS
TGATCCGAGGACTGGCATTA+AGG 0.389716 3_2:+86215001 Msa0433680:CDS
GCTTGCTGGGAGTCGAGCTC+CGG 0.391372 3_2:+86214750 Msa0433680:CDS
AGTCGTAGAAAACATGAGTC+TGG 0.394316 3_2:+86223567 Msa0433680:three_prime_UTR
CCTTCGCCGTCGCAACCGTC+CGG 0.396107 3_2:+86214277 Msa0433680:CDS
TTCAGAAGGTAATAAACAAT+TGG 0.400938 3_2:-86216870 None:intergenic
CTGGGAGCTGCACTGGCCGC+TGG 0.402711 3_2:+86220747 Msa0433680:CDS
TTCTTACATGTTCACTGATA+AGG 0.403515 3_2:+86222272 Msa0433680:CDS
AACTTGGTGGAGTATTTGGT+TGG 0.409463 3_2:+86215048 Msa0433680:CDS
TAGTCCGAGGAAAATATATA+TGG 0.418519 3_2:-86218863 None:intergenic
ATGAGAGCTGCCTTAGCCTT+AGG 0.418866 3_2:-86219567 None:intergenic
CTGGCACATTTCAGCAGAAA+TGG 0.420622 3_2:+86222661 Msa0433680:CDS
GAAAGTAACACCTATGAGAT+AGG 0.421261 3_2:+86218965 Msa0433680:CDS
TCAAAGGGATTGTAAGGATC+AGG 0.422298 3_2:+86214972 Msa0433680:CDS
CGATTAGATTGCGGTGGTGC+AGG 0.423507 3_2:-86214250 None:intergenic
GATTGCAGGATGTTCATGAT+AGG 0.426072 3_2:+86220909 Msa0433680:intron
TTGTTTATTACCTTCTGAAT+CGG 0.426616 3_2:+86216874 Msa0433680:CDS
GAAAGCACTGGGAGCTGCAC+TGG 0.427199 3_2:+86220740 Msa0433680:CDS
ATAATGCTCCTTCCTATAAT+GGG 0.428702 3_2:+86222466 Msa0433680:CDS
GTCAGGACGGTGGCAGTAAT+CGG 0.429251 3_2:+86215108 Msa0433680:CDS
CATGCTGTAGTCTATCTTCA+AGG 0.433221 3_2:-86217451 None:intergenic
CTATGTTACGTCTGAAGCTC+TGG 0.434441 3_2:+86219290 Msa0433680:CDS
GTATGCACCTTTAAGTTTCA+GGG 0.435297 3_2:-86223338 None:intergenic
GGCAGCTCTCATATGGATGC+TGG 0.436064 3_2:+86219578 Msa0433680:CDS
GTGATATCAAACATGACTAT+AGG 0.444966 3_2:+86214808 Msa0433680:CDS
TGGTTGGGCCTTTAGGGTCA+GGG 0.446084 3_2:+86215064 Msa0433680:CDS
CCTCAACCCAAAAGCTGTAC+TGG 0.447071 3_2:+86222635 Msa0433680:CDS
AGGCTAAGGCAGCTCTCATA+TGG 0.449590 3_2:+86219571 Msa0433680:CDS
GCAGTTTCTGGAGATGGAAA+AGG 0.450968 3_2:+86219266 Msa0433680:CDS
CAAGCGATTATTGTGTTCTA+CGG 0.451804 3_2:+86223637 Msa0433680:three_prime_UTR
GGAAGATGAAGATCGATAGT+TGG 0.452818 3_2:-86214140 None:intergenic
TGCATCATTAGATATAGAAA+AGG 0.453336 3_2:-86223719 None:intergenic
CTGTCTATTAGTGCGGAATC+CGG 0.457717 3_2:+86222336 Msa0433680:CDS
TCCGTATGTCTTGGAAAGTC+TGG 0.465126 3_2:+86219629 Msa0433680:CDS
TACAGCTACGGCAGCTTGCT+GGG 0.465832 3_2:+86214737 Msa0433680:CDS
TTGACTTGCAAACGCTCCTC+GGG 0.466257 3_2:-86214209 None:intergenic
TTCGTCTCTCTTTGGTGAGA+TGG 0.466707 3_2:+86214840 Msa0433680:CDS
AGAATGCCTGTGATGAGCTT+TGG 0.467508 3_2:-86223277 None:intergenic
CGCAGGAACAACAGAATCTC+CGG 0.469614 3_2:-86222355 None:intergenic
TGCATTGTTATACACTGATC+TGG 0.469741 3_2:-86223470 None:intergenic
TTCAAAGCAAACCTCTGATA+AGG 0.470543 3_2:-86222700 None:intergenic
AGGGAATCAATTCGGGCTGT+TGG 0.471812 3_2:+86219192 Msa0433680:CDS
TCAAGTGAGCTCAGGAAGTC+CGG 0.472287 3_2:+86218790 Msa0433680:CDS
CAATGCTTGGCTAGTCGTGC+TGG 0.472618 3_2:-86222541 None:intergenic
TATTATTACATCTGCAGATA+CGG 0.474405 3_2:-86214018 None:intergenic
CTTCGCCGTCGCAACCGTCC+GGG 0.475178 3_2:+86214278 Msa0433680:CDS
ACTTGGTGGAGTATTTGGTT+GGG 0.475411 3_2:+86215049 Msa0433680:CDS
TTCTAAGAAAATATCCTCAA+TGG 0.478818 3_2:+86219490 Msa0433680:CDS
GAATTGATTCCCTTGCAATT+GGG 0.478912 3_2:-86219182 None:intergenic
TAGCATAGTTTCCAACATAC+AGG 0.481690 3_2:-86214909 None:intergenic
ATCTTAAACAGATCTTGTGC+TGG 0.482284 3_2:+86213932 None:intergenic
CTCTTAACTCAAGTGAGCTC+AGG 0.486123 3_2:+86218782 Msa0433680:CDS
GCTTCTGCAGTTTCTGGAGA+TGG 0.486335 3_2:+86219260 Msa0433680:CDS
AACTTCACTGCTCTGAGTAT+CGG 0.486490 3_2:-86221020 None:intergenic
CATTAAGGAATTTAGTGAAT+GGG 0.486684 3_2:+86217352 Msa0433680:CDS
AAACTATGCTAAGGTTAATC+CGG 0.489948 3_2:+86214921 Msa0433680:CDS
CATCTAATGAATCACGATGT+TGG 0.490830 3_2:-86223538 None:intergenic
GGTTTGAATATATAAAGAAA+TGG 0.490832 3_2:+86223403 Msa0433680:three_prime_UTR
TTCACTTCGAGTGGCGAACT+TGG 0.491152 3_2:+86215032 Msa0433680:CDS
TCAATACAGTGCATTGCATC+CGG 0.492293 3_2:+86223128 Msa0433680:CDS
CACCTCAGAGGAAGCAGCTA+GGG 0.493233 3_2:+86216824 Msa0433680:CDS
AAGTCAACTTCCAGTGGCTA+TGG 0.495420 3_2:+86214225 Msa0433680:exon
CTTGCTGGGAGTCGAGCTCC+GGG 0.495428 3_2:+86214751 Msa0433680:CDS
TTTGTCTGTTGTATACCAAA+AGG 0.496811 3_2:+86221072 Msa0433680:CDS
TCTAAGCCACCTGCATCTCT+TGG 0.497035 3_2:+86218829 Msa0433680:CDS
AATATTTCACTGTTATCTGA+TGG 0.500382 3_2:-86217413 None:intergenic
GAGTTACTTACCTATCTCAT+AGG 0.500850 3_2:-86218975 None:intergenic
GTCAATGATGCAATTGCAAG+AGG 0.504606 3_2:-86223068 None:intergenic
GCATTAAGGAATTTAGTGAA+TGG 0.506177 3_2:+86217351 Msa0433680:intron
CCAAAAGCTGTACTGGATCC+TGG 0.506654 3_2:+86222642 Msa0433680:CDS
GCAGCTCTCATATGGATGCT+GGG 0.507243 3_2:+86219579 Msa0433680:CDS
GTTGACTTGCAAACGCTCCT+CGG 0.507820 3_2:-86214210 None:intergenic
AAAGAAATGGAGATAGATAT+GGG 0.512122 3_2:+86223416 Msa0433680:three_prime_UTR
AAGATTGTATTGCTGTTGTA+GGG 0.514619 3_2:+86219517 Msa0433680:CDS
ACTTCGAGTGGCGAACTTGG+TGG 0.516354 3_2:+86215035 Msa0433680:CDS
AATTGCAAGGGAATCAATTC+GGG 0.518278 3_2:+86219185 Msa0433680:CDS
AATGAATCACGATGTTGGAT+TGG 0.521399 3_2:-86223533 None:intergenic
TATGGCTGATGTACATCAGC+AGG 0.521975 3_2:+86217529 Msa0433680:CDS
ATCGTCAAAAGAGCAAGATC+CGG 0.522124 3_2:-86214940 None:intergenic
GGTGCAGGAGCCATAGCCAC+TGG 0.522250 3_2:-86214235 None:intergenic
AGATCAGTGTATAACAATGC+AGG 0.522278 3_2:+86223472 Msa0433680:three_prime_UTR
TGCAAATGGTGCTGTTGTCT+TGG 0.522927 3_2:+86217472 Msa0433680:CDS
GATCATCAATTGCCAATGCT+TGG 0.526886 3_2:-86222554 None:intergenic
AGAACTTGAAATTAGGAGAC+TGG 0.528548 3_2:-86223154 None:intergenic
CCCGAGACTCAGAAAGCACT+GGG 0.529321 3_2:+86220729 Msa0433680:CDS
TCCTTCAACCCTGACCCTAA+AGG 0.529512 3_2:-86215072 None:intergenic
GATAGACTACAGCATGCAAA+TGG 0.530107 3_2:+86217458 Msa0433680:CDS
AGGATAATAATAGTTATGTC+AGG 0.535717 3_2:+86215091 Msa0433680:CDS
CCCCGAGACTCAGAAAGCAC+TGG 0.536714 3_2:+86220728 Msa0433680:CDS
GATCTCACTTTCTTCAAAGA+CGG 0.537593 3_2:+86214177 Msa0433680:five_prime_UTR
TGTTGTTCCTGCGCAGAGAG+TGG 0.538852 3_2:+86222365 Msa0433680:CDS
ATTGCAGGATGTTCATGATA+GGG 0.541499 3_2:+86220910 Msa0433680:intron
AACTCCTTAATGCCAGTCCT+CGG 0.542152 3_2:-86215005 None:intergenic
CAACAATGTCCAAGAACCTA+AGG 0.542710 3_2:+86219551 Msa0433680:CDS
CATTTCTGCTGAAATGTGCC+AGG 0.542817 3_2:-86222660 None:intergenic
CTCTTAGAGTCATCAGTACC+CGG 0.546509 3_2:-86214769 None:intergenic
CCACCTCAGAGGAAGCAGCT+AGG 0.546816 3_2:+86216823 Msa0433680:CDS
TCTTAAACAGATCTTGTGCT+GGG 0.547199 3_2:+86213933 None:intergenic
GGATCCGATGATCCGAGGAC+TGG 0.547606 3_2:+86214993 Msa0433680:CDS
AAAATGTGTTACCTGTATGT+TGG 0.548280 3_2:+86214898 Msa0433680:CDS
AATGCCAGTCCTCGGATCAT+CGG 0.548429 3_2:-86214997 None:intergenic
GCGGTTGTGAAGCTGCTGAA+GGG 0.548854 3_2:-86222494 None:intergenic
CTGATCTAAAATTACAGCTA+CGG 0.550000 3_2:+86214725 Msa0433680:CDS
CAATCCTTACCTGAGTATCC+TGG 0.550303 3_2:-86215215 None:intergenic
ACCAGACTTTCCAAGACATA+CGG 0.552347 3_2:-86219630 None:intergenic
ACAATGTCTTGTGATGGAAT+TGG 0.555303 3_2:+86217376 Msa0433680:CDS
CCAGTGCTTTCTGAGTCTCG+GGG 0.555690 3_2:-86220728 None:intergenic
GCATCATTAGATATAGAAAA+GGG 0.556114 3_2:-86223718 None:intergenic
ATGTGCCGTAGGAGTGCATT+GGG 0.556487 3_2:-86223095 None:intergenic
GTCGTAGAAAACATGAGTCT+GGG 0.557014 3_2:+86223568 Msa0433680:three_prime_UTR
CTGAAAACTCAAATGTCCCT+CGG 0.557020 3_2:-86222299 None:intergenic
CACGCATTACCAAGAGATGC+AGG 0.558649 3_2:-86218838 None:intergenic
TTTGCCTCCACTCTCTGCGC+AGG 0.558741 3_2:-86222372 None:intergenic
CGGGTACTGATGACTCTAAG+AGG 0.560686 3_2:+86214770 Msa0433680:CDS
GAGTTTGTGTTCACTTCGAG+TGG 0.560907 3_2:+86215023 Msa0433680:CDS
GCATTTGATGCTCAATGACC+AGG 0.563623 3_2:+86215197 Msa0433680:CDS
CCATAGATAAAGTCAAGTGC+AGG 0.564762 3_2:-86217511 None:intergenic
TTTCTATATCTAATGATGCA+AGG 0.566737 3_2:+86223722 Msa0433680:three_prime_UTR
GAAAAGATTACCGATTCAGA+AGG 0.567189 3_2:-86216884 None:intergenic
TTGGCAATTGATGATCTGCT+TGG 0.567360 3_2:+86222561 Msa0433680:CDS
AGCTCACTTGAGTTAAGAGA+GGG 0.567475 3_2:-86218778 None:intergenic
TGTCCAAGAACCTAAGGCTA+AGG 0.572102 3_2:+86219557 Msa0433680:CDS
GCTCAATGACCAGGATACTC+AGG 0.572468 3_2:+86215206 Msa0433680:CDS
CGGTTGTGAAGCTGCTGAAG+GGG 0.573044 3_2:-86222493 None:intergenic
CATGTGCCGTAGGAGTGCAT+TGG 0.574006 3_2:-86223096 None:intergenic
AGCGGTTGTGAAGCTGCTGA+AGG 0.575249 3_2:-86222495 None:intergenic
GCATGATGCTCCGTATGTCT+TGG 0.576281 3_2:+86219620 Msa0433680:CDS
GATCAGTGTATAACAATGCA+GGG 0.576540 3_2:+86223473 Msa0433680:three_prime_UTR
TTTGGGTTGAGGGTCAACGG+GGG 0.576858 3_2:-86222624 None:intergenic
CTCCCTAGCTGCTTCCTCTG+AGG 0.578498 3_2:-86216826 None:intergenic
TTATCAGTGAACATGTAAGA+AGG 0.579603 3_2:-86222270 None:intergenic
CAGCTCTCATATGGATGCTG+GGG 0.579778 3_2:+86219580 Msa0433680:CDS
GTTATCTGATGGAATGTACT+TGG 0.582108 3_2:-86217402 None:intergenic
ATGTTGACATCCCAATTGCA+AGG 0.584452 3_2:+86219172 Msa0433680:CDS
CCTAGCTGCTTCCTCTGAGG+TGG 0.585891 3_2:-86216823 None:intergenic
TGAGATCTAACCAACAAGGA+TGG 0.586243 3_2:-86214161 None:intergenic
ATGTCAATGCTATTGTTGAT+CGG 0.587080 3_2:+86219238 Msa0433680:CDS
TGATGACCAAAGCTCATCAC+AGG 0.588639 3_2:+86223271 Msa0433680:CDS
GTATGTTGGAAACTATGCTA+AGG 0.594327 3_2:+86214912 Msa0433680:CDS
ACGGACCCGGACGGTTGCGA+CGG 0.594447 3_2:-86214283 None:intergenic
TAAGAGGGATCTTTACAAGA+AGG 0.601150 3_2:+86214786 Msa0433680:CDS
ATGTCTTGTGATGGAATTGG+TGG 0.601765 3_2:+86217379 Msa0433680:CDS
CAGCACGACTAGCCAAGCAT+TGG 0.603702 3_2:+86222542 Msa0433680:CDS
TTTCTTTATATATTCAAACC+AGG 0.605607 3_2:-86223400 None:intergenic
TTAAACAGATCTTGTGCTGG+GGG 0.606591 3_2:+86213935 None:intergenic
CTTAAACAGATCTTGTGCTG+GGG 0.610852 3_2:+86213934 None:intergenic
CCGGACGGTTGCGACGGCGA+AGG 0.610990 3_2:-86214277 None:intergenic
GAAATTAGGAGACTGGCCGC+CGG 0.615981 3_2:-86223147 None:intergenic
CGACGTAGTAGAAGCTGACG+TGG 0.618811 3_2:-86213992 None:intergenic
TCTGGGTTGCAAGTGTGTAG+AGG 0.619217 3_2:+86223585 Msa0433680:three_prime_UTR
ATGGGCACAATGTCTTGTGA+TGG 0.620096 3_2:+86217370 Msa0433680:CDS
ACTACCAATATCCTTATCAG+AGG 0.623846 3_2:+86222689 Msa0433680:CDS
CAGTGCTTTCTGAGTCTCGG+GGG 0.624458 3_2:-86220727 None:intergenic
AATGACTTTGCATGTGCCGT+AGG 0.625693 3_2:-86223106 None:intergenic
TGTTGACATCCCAATTGCAA+GGG 0.626270 3_2:+86219173 Msa0433680:CDS
CGACTCCCAATGCACTCCTA+CGG 0.627621 3_2:+86223090 Msa0433680:CDS
GTGAGAGATACTGGAAGCAA+TGG 0.629878 3_2:+86222435 Msa0433680:CDS
GAGCTCACTTGAGTTAAGAG+AGG 0.630893 3_2:-86218779 None:intergenic
GAAAATGCCAAATCTGCAAG+CGG 0.631748 3_2:-86222513 None:intergenic
CGCCGCGATTAAATTTGGTG+CGG 0.631903 3_2:+86223669 Msa0433680:three_prime_UTR
GCTTCTACAACACAATGTAT+CGG 0.632864 3_2:+86220949 Msa0433680:CDS
GGGTACTGATGACTCTAAGA+GGG 0.633805 3_2:+86214771 Msa0433680:CDS
GAGAGTGGAGGCAAATGACA+AGG 0.634383 3_2:+86222380 Msa0433680:CDS
ATCTGCATCAATACACGTGG+AGG 0.639042 3_2:-86215157 None:intergenic
GGGGCAGACCCATTATAGGA+AGG 0.639597 3_2:-86222474 None:intergenic
AAGACGGCGCGAATTTCCCG+AGG 0.640158 3_2:+86214193 Msa0433680:five_prime_UTR
ATACAATCTTGACTCCATTG+AGG 0.643764 3_2:-86219504 None:intergenic
ATAGAAGTGTTTGTAGTCCG+AGG 0.645673 3_2:-86218876 None:intergenic
ATCAGTGTATAACAATGCAG+GGG 0.646791 3_2:+86223474 Msa0433680:three_prime_UTR
TTCCGCACCAAATTTAATCG+CGG 0.646800 3_2:-86223671 None:intergenic
TGTTCCTGCGCAGAGAGTGG+AGG 0.648267 3_2:+86222368 Msa0433680:CDS
GATCAGGATCCGATGATCCG+AGG 0.649993 3_2:+86214988 Msa0433680:CDS
TCAATGATGCAATTGCAAGA+GGG 0.655935 3_2:-86223067 None:intergenic
GGAGATCGATTAGATTGCGG+TGG 0.656896 3_2:-86214256 None:intergenic
AGTGAGGGAACGGACCCGGA+CGG 0.658380 3_2:-86214292 None:intergenic
GTGAAAATCAGCAAGACCAG+CGG 0.660650 3_2:-86220763 None:intergenic
TAATAATAGTTATGTCAGGA+CGG 0.660766 3_2:+86215095 Msa0433680:CDS
TGTATCGGTGGCTGAGAGTG+TGG 0.662667 3_2:+86220964 Msa0433680:CDS
TGGCAATCTGTCTATTAGTG+CGG 0.662854 3_2:+86222329 Msa0433680:CDS
GTTTGCAAGTCAACTTCCAG+TGG 0.667172 3_2:+86214219 Msa0433680:five_prime_UTR
TCTACAACACAATGTATCGG+TGG 0.672727 3_2:+86220952 Msa0433680:CDS
AGTGCTTTCTGAGTCTCGGG+GGG 0.673467 3_2:-86220726 None:intergenic
TCTGGTTGAAAATTGGGACG+AGG 0.674693 3_2:+86219647 Msa0433680:CDS
ATACAGTGCATTGCATCCGG+CGG 0.681832 3_2:+86223131 Msa0433680:CDS
AAAATCTGCATCAATACACG+TGG 0.682353 3_2:-86215160 None:intergenic
GGACGAGGAGCATTCTGCCG+AGG 0.683462 3_2:+86219662 Msa0433680:CDS
CTTAGAGTCAACCACCTCAG+AGG 0.685984 3_2:+86216812 Msa0433680:CDS
GAAGGAGATCGATTAGATTG+CGG 0.687354 3_2:-86214259 None:intergenic
CTAATGATGCAAGGTGCCTG+CGG 0.693479 3_2:+86223731 Msa0433680:three_prime_UTR
TCAGTGTATAACAATGCAGG+GGG 0.695855 3_2:+86223475 Msa0433680:three_prime_UTR
AGCTCTCATATGGATGCTGG+GGG 0.703952 3_2:+86219581 Msa0433680:CDS
AAAGTGAGATCTAACCAACA+AGG 0.705125 3_2:-86214165 None:intergenic
GGATCTGCTTCTAAGTACCA+CGG 0.710539 3_2:+86222401 Msa0433680:CDS
TAATAGTTATGTCAGGACGG+TGG 0.728993 3_2:+86215098 Msa0433680:CDS
GCATTACCAAGAGATGCAGG+TGG 0.740701 3_2:-86218835 None:intergenic
TCACTGATAAGGAACACCGA+GGG 0.741366 3_2:+86222283 Msa0433680:CDS
GCTCACTTGAGTTAAGAGAG+GGG 0.755910 3_2:-86218777 None:intergenic
TTCACTGATAAGGAACACCG+AGG 0.759479 3_2:+86222282 Msa0433680:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTGTATCTTTTTTTTA+CGG - chr3_2:86216444-86216463 None:intergenic 10.0%
!!! TATGACAATATTTTATATTT+AGG + chr3_2:86221387-86221406 Msa0433680:intron 10.0%
!!! TTACATTATTTATAGTTTTT+CGG + chr3_2:86221516-86221535 Msa0433680:intron 10.0%
!! AAAAATATCTAATTTGAAAA+TGG - chr3_2:86221636-86221655 None:intergenic 10.0%
!! TAAAAATGAATGTAAATTGA+GGG + chr3_2:86215401-86215420 Msa0433680:intron 15.0%
!!! TTTTTTTCCTTAACATTATT+TGG + chr3_2:86216276-86216295 Msa0433680:intron 15.0%
!!! ATATTGTATCTTTTTTTTAC+GGG - chr3_2:86216443-86216462 None:intergenic 15.0%
!!! GTGCAAAATAATTTTAAAAT+GGG - chr3_2:86217010-86217029 None:intergenic 15.0%
!! AATTATAAATCAGTTATTCT+AGG + chr3_2:86217115-86217134 Msa0433680:intron 15.0%
!! ATAAACAAAATAAGCAATTA+AGG - chr3_2:86217211-86217230 None:intergenic 15.0%
!!! TTATTGATAACTTTTTCATT+TGG + chr3_2:86218105-86218124 Msa0433680:intron 15.0%
!!! TTAAATCTTGTTTTTGTTTA+TGG + chr3_2:86218144-86218163 Msa0433680:intron 15.0%
!!! AATTTTAATGTATAAGTGTA+TGG - chr3_2:86218452-86218471 None:intergenic 15.0%
!! TATATCATATGTGAATATTA+GGG + chr3_2:86218507-86218526 Msa0433680:intron 15.0%
!! ATTCATATGATTTCAATTAA+CGG - chr3_2:86219795-86219814 None:intergenic 15.0%
!! AAAAAAAAAAAAAGATTTGG+TGG - chr3_2:86220584-86220603 None:intergenic 15.0%
!! ACAAAACAAAACAAAAAAAT+TGG - chr3_2:86221284-86221303 None:intergenic 15.0%
!!! AATAATTATTTAGAATGTCA+AGG - chr3_2:86222001-86222020 None:intergenic 15.0%
!! AAATATCAATAATAAAAGCA+AGG - chr3_2:86222154-86222173 None:intergenic 15.0%
!! TAAATTTAATAATATGATGC+AGG + chr3_2:86223031-86223050 Msa0433680:intron 15.0%
!! TATGATCTACAAATTCAATT+TGG + chr3_2:86214345-86214364 Msa0433680:intron 20.0%
!! GATAATTGTGATATCAATAA+TGG - chr3_2:86214607-86214626 None:intergenic 20.0%
!! ACAATTATCTTATGTTAATG+TGG + chr3_2:86214618-86214637 Msa0433680:intron 20.0%
!!! TTTATCATATGTTGATGATT+AGG - chr3_2:86215255-86215274 None:intergenic 20.0%
!! GTCTAATGATTTATGTAAAT+CGG + chr3_2:86215342-86215361 Msa0433680:intron 20.0%
!! GTAAAAATGAATGTAAATTG+AGG + chr3_2:86215400-86215419 Msa0433680:intron 20.0%
!! ATTTGTAAAAAAGTTAGTAC+TGG + chr3_2:86215620-86215639 Msa0433680:intron 20.0%
!!! AAAGAGATAATATTTTATGC+TGG + chr3_2:86215701-86215720 Msa0433680:intron 20.0%
!!! ATTTTATGCTGGAAAATAAA+AGG + chr3_2:86215712-86215731 Msa0433680:intron 20.0%
!!! TTTTATGCTGGAAAATAAAA+GGG + chr3_2:86215713-86215732 Msa0433680:intron 20.0%
!!! AAAAGGGTATTTTGATATTT+TGG + chr3_2:86215729-86215748 Msa0433680:intron 20.0%
!! AATGTATAGTTAACGTAAAT+CGG + chr3_2:86215997-86216016 Msa0433680:intron 20.0%
!!! TGGATATTACATTTATGTTT+TGG + chr3_2:86216066-86216085 Msa0433680:intron 20.0%
!! TTGTACTCTATACTATAAAT+TGG + chr3_2:86216240-86216259 Msa0433680:intron 20.0%
!!! AAAAGGAACATTCATTTTTA+AGG - chr3_2:86216617-86216636 None:intergenic 20.0%
!!! GGTGCAAAATAATTTTAAAA+TGG - chr3_2:86217011-86217030 None:intergenic 20.0%
!!! CTAATTTTTCAACAACTTAT+TGG + chr3_2:86217306-86217325 Msa0433680:intron 20.0%
!! ATTTATCAATACAGAATCTA+CGG - chr3_2:86218006-86218025 None:intergenic 20.0%
!! AAGATTTAAAAACACAGAAA+TGG - chr3_2:86218133-86218152 None:intergenic 20.0%
!! GTATATCATATGTGAATATT+AGG + chr3_2:86218506-86218525 Msa0433680:intron 20.0%
!! TATTTAACCATATTTGCATA+AGG + chr3_2:86218590-86218609 Msa0433680:intron 20.0%
!! ATGAACATGATAGTTTAAAT+AGG - chr3_2:86218637-86218656 None:intergenic 20.0%
!!! ATGCAACTTATTTTTGTTTA+AGG + chr3_2:86218736-86218755 Msa0433680:intron 20.0%
!!! GATTTAAATTTCTGCATTTT+AGG + chr3_2:86219737-86219756 Msa0433680:intron 20.0%
!!! AATTAACGGCTTAAATTTTT+GGG - chr3_2:86219781-86219800 None:intergenic 20.0%
!! GTTAATTGAAATCATATGAA+TGG + chr3_2:86219794-86219813 Msa0433680:intron 20.0%
!!! TTTTATATTATACCTCTAAC+CGG + chr3_2:86219817-86219836 Msa0433680:intron 20.0%
!!! TATGATTTTGAAATTTGAAG+AGG + chr3_2:86220103-86220122 Msa0433680:intron 20.0%
!!! ATGATTTTGAAATTTGAAGA+GGG + chr3_2:86220104-86220123 Msa0433680:intron 20.0%
!! TTATTCTTCTACAACATTAA+AGG + chr3_2:86221454-86221473 Msa0433680:intron 20.0%
!!! ATTATTTATAGTTTTTCGGT+AGG + chr3_2:86221520-86221539 Msa0433680:intron 20.0%
!!! TTTTTTTGTAATCAAACAGA+TGG + chr3_2:86221584-86221603 Msa0433680:intron 20.0%
!! CTTCATGTAAATTGATATAA+CGG + chr3_2:86221824-86221843 Msa0433680:intron 20.0%
!!! ACATTGAACCTTTTTATTTT+TGG + chr3_2:86221936-86221955 Msa0433680:intron 20.0%
!! ATCATTCACCAAAAATAAAA+AGG - chr3_2:86221947-86221966 None:intergenic 20.0%
!! AGAATATAATATAGAAGAGA+GGG - chr3_2:86222221-86222240 None:intergenic 20.0%
!! ATAATATGACAACACATTAA+TGG + chr3_2:86222851-86222870 Msa0433680:intron 20.0%
!! TGCAATTTAAAAAATCTCTA+GGG - chr3_2:86222927-86222946 None:intergenic 20.0%
!! AAGAAAAAGAACTTGAAATT+AGG - chr3_2:86223164-86223183 None:intergenic 20.0%
!! TTTCTTTATATATTCAAACC+AGG - chr3_2:86223403-86223422 None:intergenic 20.0%
!! GGTTTGAATATATAAAGAAA+TGG + chr3_2:86223403-86223422 Msa0433680:three_prime_UTR 20.0%
! TATTATTACATCTGCAGATA+CGG - chr3_2:86214021-86214040 None:intergenic 25.0%
!!! CTCACTTTTTTCATCAAAAA+TGG - chr3_2:86214086-86214105 None:intergenic 25.0%
! TCGTGAAAGTTAAAATTCAA+CGG - chr3_2:86214524-86214543 None:intergenic 25.0%
! ATTATCTTATGTTAATGTGG+TGG + chr3_2:86214621-86214640 Msa0433680:intron 25.0%
! CCTGGTTAAAATTAAATGTT+AGG - chr3_2:86214692-86214711 None:intergenic 25.0%
!!! CCTAACATTTAATTTTAACC+AGG + chr3_2:86214689-86214708 Msa0433680:intron 25.0%
!! TGACGATTAATTTTCTTCAA+AGG + chr3_2:86214956-86214975 Msa0433680:CDS 25.0%
!! GACGATTAATTTTCTTCAAA+GGG + chr3_2:86214957-86214976 Msa0433680:CDS 25.0%
! AGGATAATAATAGTTATGTC+AGG + chr3_2:86215091-86215110 Msa0433680:CDS 25.0%
! TAATAATAGTTATGTCAGGA+CGG + chr3_2:86215095-86215114 Msa0433680:CDS 25.0%
!!! TTTTTTACTGGAAAGAGAAA+AGG + chr3_2:86215378-86215397 Msa0433680:intron 25.0%
!!! TAGGAGCTATTACATTTTTT+TGG + chr3_2:86215435-86215454 Msa0433680:intron 25.0%
!!! AGGAGCTATTACATTTTTTT+GGG + chr3_2:86215436-86215455 Msa0433680:intron 25.0%
!!! TTTGATTTGCTAAAAAACAG+GGG - chr3_2:86215907-86215926 None:intergenic 25.0%
!!! GTTTGATTTGCTAAAAAACA+GGG - chr3_2:86215908-86215927 None:intergenic 25.0%
!!! TTCACAAAGTTGATGATTAA+GGG - chr3_2:86215934-86215953 None:intergenic 25.0%
! GATTTACGTTAACTATACAT+TGG - chr3_2:86215998-86216017 None:intergenic 25.0%
! TAGTATAGAGTACAAATAGA+TGG - chr3_2:86216235-86216254 None:intergenic 25.0%
!!! ATATTGCTACTTTAGGATTA+AGG - chr3_2:86216415-86216434 None:intergenic 25.0%
!!! CATTTTTAAGGAACCTAAAA+AGG - chr3_2:86216605-86216624 None:intergenic 25.0%
! GCAATAGAAAGAACAAAAAA+AGG - chr3_2:86216634-86216653 None:intergenic 25.0%
!! TTGTTGTTCACATATATATC+AGG + chr3_2:86216661-86216680 Msa0433680:intron 25.0%
! TTCAGAAGGTAATAAACAAT+TGG - chr3_2:86216873-86216892 None:intergenic 25.0%
! TTGTTTATTACCTTCTGAAT+CGG + chr3_2:86216874-86216893 Msa0433680:CDS 25.0%
! TGTCAAAATGAGAAATAGAA+AGG - chr3_2:86217032-86217051 None:intergenic 25.0%
! CTGATTTATAATTGTATGCA+AGG - chr3_2:86217108-86217127 None:intergenic 25.0%
! TATTCTAGGTAATATGATTG+TGG + chr3_2:86217129-86217148 Msa0433680:intron 25.0%
! ATTCTAGGTAATATGATTGT+GGG + chr3_2:86217130-86217149 Msa0433680:intron 25.0%
! ATAAAATGTCTTTCTCATTG+TGG + chr3_2:86217239-86217258 Msa0433680:intron 25.0%
! CATTAAGGAATTTAGTGAAT+GGG + chr3_2:86217352-86217371 Msa0433680:CDS 25.0%
! AATATTTCACTGTTATCTGA+TGG - chr3_2:86217416-86217435 None:intergenic 25.0%
! ACTATGTTGTAAAGAAAAAC+AGG - chr3_2:86217599-86217618 None:intergenic 25.0%
! AACTGAAAAGTAAAGTTGTA+TGG - chr3_2:86217640-86217659 None:intergenic 25.0%
! CTACTAAAAGTAAAGTCATA+TGG - chr3_2:86217673-86217692 None:intergenic 25.0%
! CTGGTTTAGTATATTTAACT+AGG + chr3_2:86218049-86218068 Msa0433680:intron 25.0%
! GTATATTTAACTAGGATGAT+TGG + chr3_2:86218057-86218076 Msa0433680:intron 25.0%
! TAAACACTTGTATAAGTGTA+TGG - chr3_2:86218396-86218415 None:intergenic 25.0%
! ATTAAACTGTTTAACAAACG+AGG + chr3_2:86218530-86218549 Msa0433680:intron 25.0%
! TTAAACTGTTTAACAAACGA+GGG + chr3_2:86218531-86218550 Msa0433680:intron 25.0%
!! TTCAACTTTTTGACATATGA+TGG - chr3_2:86218917-86218936 None:intergenic 25.0%
! CATCAAATTGAAAAATGCAA+TGG - chr3_2:86219050-86219069 None:intergenic 25.0%
!! TGATTAATTCCCTTTCTTTT+TGG + chr3_2:86219085-86219104 Msa0433680:intron 25.0%
! TAAGCATTACCAAAAAGAAA+GGG - chr3_2:86219097-86219116 None:intergenic 25.0%
! ATAAGCATTACCAAAAAGAA+AGG - chr3_2:86219098-86219117 None:intergenic 25.0%
!! TTCTAAGAAAATATCCTCAA+TGG + chr3_2:86219490-86219509 Msa0433680:CDS 25.0%
! AAAAGTTATGTATACTACCT+CGG - chr3_2:86219682-86219701 None:intergenic 25.0%
! AAATTTAAATCGCAAATGTG+TGG - chr3_2:86219728-86219747 None:intergenic 25.0%
!! CAATTAACGGCTTAAATTTT+TGG - chr3_2:86219782-86219801 None:intergenic 25.0%
! TTGTCTTGTAAACTGAATTA+TGG - chr3_2:86219953-86219972 None:intergenic 25.0%
!! TGTTTTACAAGAATTTTGCT+AGG - chr3_2:86220046-86220065 None:intergenic 25.0%
! TAGAAGCCTGTAATAAAATA+AGG - chr3_2:86220936-86220955 None:intergenic 25.0%
!! GTCAGTAAATTATTACCTTT+TGG - chr3_2:86221090-86221109 None:intergenic 25.0%
!! TTTTAAACTTGAAGCCATTT+CGG + chr3_2:86221133-86221152 Msa0433680:intron 25.0%
! TTAGTGCTTCATAGATAAAA+CGG - chr3_2:86221184-86221203 None:intergenic 25.0%
! ATGAGGGAAAATATGATAAA+CGG + chr3_2:86221851-86221870 Msa0433680:intron 25.0%
! CAGAATATAATATAGAAGAG+AGG - chr3_2:86222222-86222241 None:intergenic 25.0%
!!! TTGGTTTAGATTTTTCAGTT+GGG + chr3_2:86222580-86222599 Msa0433680:CDS 25.0%
! TGACTTGAATCAAAATCATT+AGG - chr3_2:86222805-86222824 None:intergenic 25.0%
! GTGCAATTTAAAAAATCTCT+AGG - chr3_2:86222928-86222947 None:intergenic 25.0%
!!! CCAATATACTAGACATTTTT+TGG - chr3_2:86222989-86223008 None:intergenic 25.0%
! CCAAAAAATGTCTAGTATAT+TGG + chr3_2:86222986-86223005 Msa0433680:intron 25.0%
!!! CTTTATTTTAATCTGTGACT+TGG - chr3_2:86223249-86223268 None:intergenic 25.0%
! CAAGTCACAGATTAAAATAA+AGG + chr3_2:86223247-86223266 Msa0433680:CDS 25.0%
!! AGTCGACAATAATGAAATTT+TGG + chr3_2:86223374-86223393 Msa0433680:three_prime_UTR 25.0%
!!! ATAATGAAATTTTGGAATCC+TGG + chr3_2:86223382-86223401 Msa0433680:three_prime_UTR 25.0%
! TAAAGAAATGGAGATAGATA+TGG + chr3_2:86223415-86223434 Msa0433680:three_prime_UTR 25.0%
! AAAGAAATGGAGATAGATAT+GGG + chr3_2:86223416-86223435 Msa0433680:three_prime_UTR 25.0%
! TTGATGTTGAAATGTGAATT+TGG + chr3_2:86223694-86223713 Msa0433680:three_prime_UTR 25.0%
! GCATCATTAGATATAGAAAA+GGG - chr3_2:86223721-86223740 None:intergenic 25.0%
! TGCATCATTAGATATAGAAA+AGG - chr3_2:86223722-86223741 None:intergenic 25.0%
! TTTCTATATCTAATGATGCA+AGG + chr3_2:86223722-86223741 Msa0433680:three_prime_UTR 25.0%
CATTCATATACGCAAATTCT+AGG + chr3_2:86214472-86214491 Msa0433680:intron 30.0%
AAGTTAAAATTCAACGGCAT+TGG - chr3_2:86214518-86214537 None:intergenic 30.0%
! CTGATCTAAAATTACAGCTA+CGG + chr3_2:86214725-86214744 Msa0433680:CDS 30.0%
GTGATATCAAACATGACTAT+AGG + chr3_2:86214808-86214827 Msa0433680:CDS 30.0%
AAAATGTGTTACCTGTATGT+TGG + chr3_2:86214898-86214917 Msa0433680:CDS 30.0%
AAACTATGCTAAGGTTAATC+CGG + chr3_2:86214921-86214940 Msa0433680:CDS 30.0%
! TTTTCTTCAAAGGGATTGTA+AGG + chr3_2:86214966-86214985 Msa0433680:CDS 30.0%
! TTAGACTATGTAGATTAGCT+TGG - chr3_2:86215328-86215347 None:intergenic 30.0%
AAATGAATGTAAATTGAGGG+AGG + chr3_2:86215404-86215423 Msa0433680:intron 30.0%
AGTACAAGACAAAATAGTAC+AGG + chr3_2:86215650-86215669 Msa0433680:intron 30.0%
! TTTGATTTAGAACAGGTCAT+GGG - chr3_2:86215852-86215871 None:intergenic 30.0%
!! CGTTTGATTTGCTAAAAAAC+AGG - chr3_2:86215909-86215928 None:intergenic 30.0%
!! CTTCACAAAGTTGATGATTA+AGG - chr3_2:86215935-86215954 None:intergenic 30.0%
AAAGGGTAAAAGTAATGTAG+TGG + chr3_2:86216046-86216065 Msa0433680:intron 30.0%
GGATCTATTCTATAAGTGAT+GGG - chr3_2:86216214-86216233 None:intergenic 30.0%
TGGATCTATTCTATAAGTGA+TGG - chr3_2:86216215-86216234 None:intergenic 30.0%
TGCTCATCCAAATAATGTTA+AGG - chr3_2:86216286-86216305 None:intergenic 30.0%
TTGTAAGCAATGCTATTATC+AGG + chr3_2:86216324-86216343 Msa0433680:intron 30.0%
!! GGCTTTAATATTGCTACTTT+AGG - chr3_2:86216422-86216441 None:intergenic 30.0%
! ACCATATCCTTTACCTTTTT+AGG + chr3_2:86216589-86216608 Msa0433680:intron 30.0%
ACCTAAAAAGGTAAAGGATA+TGG - chr3_2:86216593-86216612 None:intergenic 30.0%
TAAGGAACCTAAAAAGGTAA+AGG - chr3_2:86216599-86216618 None:intergenic 30.0%
! ATGATCTTGTTTGTTTCATC+AGG + chr3_2:86216749-86216768 Msa0433680:intron 30.0%
TGTCTGCTTTACAAGAAATT+TGG + chr3_2:86216787-86216806 Msa0433680:CDS 30.0%
TAAAGGAGTTCAATGGATAT+CGG - chr3_2:86216918-86216937 None:intergenic 30.0%
!!! TAATTTTAAAATGGGAACCC+CGG - chr3_2:86217002-86217021 None:intergenic 30.0%
!! AATATGATTGTGGGAGTATT+TGG + chr3_2:86217139-86217158 Msa0433680:intron 30.0%
GCATTAAGGAATTTAGTGAA+TGG + chr3_2:86217351-86217370 Msa0433680:intron 30.0%
TTTGTCATTAAGGTTCTGTA+AGG + chr3_2:86217722-86217741 Msa0433680:intron 30.0%
! GCTAAATTAGTTTCAACCAA+AGG - chr3_2:86217838-86217857 None:intergenic 30.0%
! TAATTTAGCTCAGTTCCTTA+AGG + chr3_2:86217849-86217868 Msa0433680:intron 30.0%
TACTTGCAAATCTAAGTCTA+AGG - chr3_2:86217932-86217951 None:intergenic 30.0%
TTGTTTACTTACCATAGAAG+AGG + chr3_2:86218247-86218266 Msa0433680:intron 30.0%
TAAACTGTTTAACAAACGAG+GGG + chr3_2:86218532-86218551 Msa0433680:intron 30.0%
! TGACTGTATCTTTTCATCTT+TGG + chr3_2:86218685-86218704 Msa0433680:intron 30.0%
AGAATTGCATAAGATTGTTC+CGG - chr3_2:86218812-86218831 None:intergenic 30.0%
! TGCACCATATATATTTTCCT+CGG + chr3_2:86218859-86218878 Msa0433680:CDS 30.0%
TAGTCCGAGGAAAATATATA+TGG - chr3_2:86218866-86218885 None:intergenic 30.0%
!! CAATTTGATGTTTTGTTCAC+CGG + chr3_2:86219060-86219079 Msa0433680:intron 30.0%
AGAAAGGGAATTAATCAAAC+CGG - chr3_2:86219082-86219101 None:intergenic 30.0%
ATGTCAATGCTATTGTTGAT+CGG + chr3_2:86219238-86219257 Msa0433680:CDS 30.0%
GTTCGTATATTAACATGAAG+CGG - chr3_2:86219374-86219393 None:intergenic 30.0%
!!! ATATTGTTTTGACCTGGTAA+TGG + chr3_2:86219412-86219431 Msa0433680:intron 30.0%
CATAAAATGAACTTTCGAAC+TGG - chr3_2:86219451-86219470 None:intergenic 30.0%
! TTCGAAAGTTCATTTTATGC+AGG + chr3_2:86219452-86219471 Msa0433680:intron 30.0%
! AAGATTGTATTGCTGTTGTA+GGG + chr3_2:86219517-86219536 Msa0433680:CDS 30.0%
!!! GCTTAAATTTTTGGGATAGT+TGG - chr3_2:86219773-86219792 None:intergenic 30.0%
AAAAAACGTTCATGCTTAAC+AGG - chr3_2:86219919-86219938 None:intergenic 30.0%
TCAGTTTACAAGACAAGATA+AGG + chr3_2:86219957-86219976 Msa0433680:intron 30.0%
! GCGATGTTCTAAATAGTTAT+CGG - chr3_2:86219997-86220016 None:intergenic 30.0%
ATTGCGTCTTATATTACAGA+GGG - chr3_2:86220212-86220231 None:intergenic 30.0%
AATTGCGTCTTATATTACAG+AGG - chr3_2:86220213-86220232 None:intergenic 30.0%
TGTAATATAAGACGCAATTG+TGG + chr3_2:86220214-86220233 Msa0433680:intron 30.0%
GAACTTAACACCTAATATCA+AGG - chr3_2:86220246-86220265 None:intergenic 30.0%
ATATTAGGTGTTAAGTTCCA+CGG + chr3_2:86220248-86220267 Msa0433680:intron 30.0%
AGTAAATAACAACTCAAACC+TGG - chr3_2:86220788-86220807 None:intergenic 30.0%
ACAATGCGATTAGATATTTG+TGG + chr3_2:86220830-86220849 Msa0433680:intron 30.0%
!!! ATAGGGCCTTATTTTATTAC+AGG + chr3_2:86220927-86220946 Msa0433680:CDS 30.0%
! AATACTGAAACTGCTTGTTT+TGG - chr3_2:86220998-86221017 None:intergenic 30.0%
TTTGTCTGTTGTATACCAAA+AGG + chr3_2:86221072-86221091 Msa0433680:CDS 30.0%
TTTAAACTTGAAGCCATTTC+GGG + chr3_2:86221134-86221153 Msa0433680:intron 30.0%
!!! TGTTTTGATTCAACACACTT+TGG + chr3_2:86221301-86221320 Msa0433680:intron 30.0%
TCTCAGACATATGGTAATAA+TGG + chr3_2:86221329-86221348 Msa0433680:intron 30.0%
TTAAAGGATGATGATCAATG+AGG + chr3_2:86221470-86221489 Msa0433680:intron 30.0%
TAAAGGATGATGATCAATGA+GGG + chr3_2:86221471-86221490 Msa0433680:intron 30.0%
!! TATAGTTTTTCGGTAGGAAT+TGG + chr3_2:86221526-86221545 Msa0433680:intron 30.0%
ATGTGTTTGTGTGTATGTAT+CGG + chr3_2:86221748-86221767 Msa0433680:intron 30.0%
ATTGATATAACGGCAAAATG+AGG + chr3_2:86221834-86221853 Msa0433680:intron 30.0%
TTGATATAACGGCAAAATGA+GGG + chr3_2:86221835-86221854 Msa0433680:intron 30.0%
TGAGGGAAAATATGATAAAC+GGG + chr3_2:86221852-86221871 Msa0433680:intron 30.0%
!! AAGTCAAGGTTATTTTACAG+GGG - chr3_2:86221905-86221924 None:intergenic 30.0%
!! GAAGTCAAGGTTATTTTACA+GGG - chr3_2:86221906-86221925 None:intergenic 30.0%
!! AGAAGTCAAGGTTATTTTAC+AGG - chr3_2:86221907-86221926 None:intergenic 30.0%
ATAATATAGAAGAGAGGGAA+GGG - chr3_2:86222216-86222235 None:intergenic 30.0%
TATAATATAGAAGAGAGGGA+AGG - chr3_2:86222217-86222236 None:intergenic 30.0%
TTATCAGTGAACATGTAAGA+AGG - chr3_2:86222273-86222292 None:intergenic 30.0%
TTCTTACATGTTCACTGATA+AGG + chr3_2:86222272-86222291 Msa0433680:CDS 30.0%
!! TTTGAGTTTTCAGATGAACT+TGG + chr3_2:86222309-86222328 Msa0433680:CDS 30.0%
!! ATTATAGGAAGGAGCATTAT+AGG - chr3_2:86222466-86222485 None:intergenic 30.0%
TATAATGCTCCTTCCTATAA+TGG + chr3_2:86222465-86222484 Msa0433680:CDS 30.0%
ATAATGCTCCTTCCTATAAT+GGG + chr3_2:86222466-86222485 Msa0433680:CDS 30.0%
!! CTTGGTTTAGATTTTTCAGT+TGG + chr3_2:86222579-86222598 Msa0433680:CDS 30.0%
ATCAAAATCATTAGGTGATG+TGG - chr3_2:86222797-86222816 None:intergenic 30.0%
!! GATCAATTTTGATGCATTGT+TGG - chr3_2:86222905-86222924 None:intergenic 30.0%
!!! TACTAGACATTTTTTGGTGT+TGG - chr3_2:86222983-86223002 None:intergenic 30.0%
!! CTAGTATATTGGTTTATCTG+TGG + chr3_2:86222997-86223016 Msa0433680:intron 30.0%
!!! TATTTTAATCTGTGACTTGG+CGG - chr3_2:86223246-86223265 None:intergenic 30.0%
AAAGTGAGATCTAACCAACA+AGG - chr3_2:86214168-86214187 None:intergenic 35.0%
GATCTCACTTTCTTCAAAGA+CGG + chr3_2:86214177-86214196 Msa0433680:five_prime_UTR 35.0%
TAAGATGAAGAGATGAGTGA+GGG - chr3_2:86214310-86214329 None:intergenic 35.0%
! GTTTGCTAAGATCCAAAAAG+CGG - chr3_2:86214403-86214422 None:intergenic 35.0%
TAAGAGGGATCTTTACAAGA+AGG + chr3_2:86214786-86214805 Msa0433680:CDS 35.0%
ATTGATGTTTCGTCTCTCTT+TGG + chr3_2:86214832-86214851 Msa0433680:CDS 35.0%
TAGCATAGTTTCCAACATAC+AGG - chr3_2:86214912-86214931 None:intergenic 35.0%
GTATGTTGGAAACTATGCTA+AGG + chr3_2:86214912-86214931 Msa0433680:CDS 35.0%
AAAATCTGCATCAATACACG+TGG - chr3_2:86215163-86215182 None:intergenic 35.0%
ATCAAATGCTTCAACGTTTC+TGG - chr3_2:86215186-86215205 None:intergenic 35.0%
! AGGTAAGGATTGTGCTTTTA+TGG + chr3_2:86215226-86215245 Msa0433680:intron 35.0%
!! GTAGATTAGCTTGGTTCTAT+AGG - chr3_2:86215319-86215338 None:intergenic 35.0%
! TATGTAAATCGGTTTCTTCG+AGG + chr3_2:86215353-86215372 Msa0433680:intron 35.0%
!!! TTCTTCGAGGAGTTTTTTAC+TGG + chr3_2:86215366-86215385 Msa0433680:intron 35.0%
GAAGTTACTTAGTTGGGAAA+TGG + chr3_2:86215475-86215494 Msa0433680:intron 35.0%
TTACTTAGTTGGGAAATGGA+GGG + chr3_2:86215479-86215498 Msa0433680:intron 35.0%
CTCGAATGTAAAATGAAGTG+TGG - chr3_2:86215530-86215549 None:intergenic 35.0%
TACATTCGAGTATAATTCCC+TGG + chr3_2:86215540-86215559 Msa0433680:intron 35.0%
AGGACAAGACAAAACTATAC+TGG + chr3_2:86215670-86215689 Msa0433680:intron 35.0%
!!! TATTTTGGTAGTCTGTACTC+CGG + chr3_2:86215744-86215763 Msa0433680:intron 35.0%
!!! TGTCTCATGGTTTTTTAGAG+AGG + chr3_2:86215776-86215795 Msa0433680:intron 35.0%
!!! GTCTCATGGTTTTTTAGAGA+GGG + chr3_2:86215777-86215796 Msa0433680:intron 35.0%
! GTTTGATTTAGAACAGGTCA+TGG - chr3_2:86215853-86215872 None:intergenic 35.0%
! TGACCTGTTCTAAATCAAAC+AGG + chr3_2:86215853-86215872 Msa0433680:intron 35.0%
! GACCTGTTCTAAATCAAACA+GGG + chr3_2:86215854-86215873 Msa0433680:intron 35.0%
! TACCCTGTTTGATTTAGAAC+AGG - chr3_2:86215859-86215878 None:intergenic 35.0%
TAAAAAACAGGGGACTAAAC+AGG - chr3_2:86215897-86215916 None:intergenic 35.0%
!! TGTAGATTAGCTTGGTTCTA+GGG - chr3_2:86215320-86215339 None:intergenic 35.0%
!! ATGTAGATTAGCTTGGTTCT+AGG - chr3_2:86215321-86215340 None:intergenic 35.0%
! TTGGACTATGTAGATTAGCT+TGG - chr3_2:86215979-86215998 None:intergenic 35.0%
! GTTAACGTAAATCGGTTTCT+TGG + chr3_2:86216005-86216024 Msa0433680:intron 35.0%
!!! TTATGTTTTGGCTTGTGCTT+TGG + chr3_2:86216078-86216097 Msa0433680:intron 35.0%
!!! TATGTTTTGGCTTGTGCTTT+GGG + chr3_2:86216079-86216098 Msa0433680:intron 35.0%
!! GCTTTGGCTCTTTATTTCTT+CGG + chr3_2:86216127-86216146 Msa0433680:intron 35.0%
TTCACTTTGACAAGTGATGA+CGG - chr3_2:86216527-86216546 None:intergenic 35.0%
GATATGGTAGTTAGAGAAAG+TGG - chr3_2:86216577-86216596 None:intergenic 35.0%
ATCATGTTGTGCAGATCATT+TGG - chr3_2:86216734-86216753 None:intergenic 35.0%
!! GAAAAGATTACCGATTCAGA+AGG - chr3_2:86216887-86216906 None:intergenic 35.0%
! AGCTTTCTAAAGGAGTTCAA+TGG - chr3_2:86216925-86216944 None:intergenic 35.0%
GGAGAAAGAAGCTAATATAC+TGG - chr3_2:86217087-86217106 None:intergenic 35.0%
GAATAGTGACTTCACAAATG+TGG + chr3_2:86217168-86217187 Msa0433680:intron 35.0%
! ACAATGTCTTGTGATGGAAT+TGG + chr3_2:86217376-86217395 Msa0433680:CDS 35.0%
GTTATCTGATGGAATGTACT+TGG - chr3_2:86217405-86217424 None:intergenic 35.0%
GGGACATGTATTTGTCATTA+AGG + chr3_2:86217712-86217731 Msa0433680:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_2:86217747-86217766 Msa0433680:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_2:86217759-86217778 Msa0433680:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_2:86217760-86217779 Msa0433680:intron 35.0%
AGTGTTAACCTTAGACTTAG+AGG + chr3_2:86217784-86217803 Msa0433680:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_2:86217747-86217766 Msa0433680:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_2:86217759-86217778 Msa0433680:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_2:86217760-86217779 Msa0433680:intron 35.0%
!! TCAATAAGTGCTGATCATGT+AGG + chr3_2:86218210-86218229 Msa0433680:intron 35.0%
CAGCTTATACAGAGTTTATG+TGG - chr3_2:86218288-86218307 None:intergenic 35.0%
AAACTGTTTAACAAACGAGG+GGG + chr3_2:86218533-86218552 Msa0433680:intron 35.0%
ATCAGAAATCACATTGCTTC+TGG - chr3_2:86218718-86218737 None:intergenic 35.0%
GAAAGTAACACCTATGAGAT+AGG + chr3_2:86218965-86218984 Msa0433680:CDS 35.0%
GAGTTACTTACCTATCTCAT+AGG - chr3_2:86218978-86218997 None:intergenic 35.0%
!!! TTTTTTCTCTAGCACATTGG+GGG - chr3_2:86219000-86219019 None:intergenic 35.0%
!!! CTTTTTTCTCTAGCACATTG+GGG - chr3_2:86219001-86219020 None:intergenic 35.0%
!!! CCTTTTTTCTCTAGCACATT+GGG - chr3_2:86219002-86219021 None:intergenic 35.0%
CCAATGTGCTAGAGAAAAAA+GGG + chr3_2:86219000-86219019 Msa0433680:intron 35.0%
CAATGTGCTAGAGAAAAAAG+GGG + chr3_2:86219001-86219020 Msa0433680:intron 35.0%
! GAATTGATTCCCTTGCAATT+GGG - chr3_2:86219185-86219204 None:intergenic 35.0%
CAATTGCAAGGGAATCAATT+CGG + chr3_2:86219184-86219203 Msa0433680:CDS 35.0%
AATTGCAAGGGAATCAATTC+GGG + chr3_2:86219185-86219204 Msa0433680:CDS 35.0%
! CAAATACTTGTTAGATACCC+TGG + chr3_2:86219322-86219341 Msa0433680:intron 35.0%
AGCGGTACAATATTACTCTT+GGG - chr3_2:86219356-86219375 None:intergenic 35.0%
AAGCGGTACAATATTACTCT+TGG - chr3_2:86219357-86219376 None:intergenic 35.0%
!!! CATGACATATTGTTTTGACC+TGG + chr3_2:86219406-86219425 Msa0433680:intron 35.0%
TACTCTATTCTACCATTACC+AGG - chr3_2:86219427-86219446 None:intergenic 35.0%
ATACAATCTTGACTCCATTG+AGG - chr3_2:86219507-86219526 None:intergenic 35.0%
! CAAGATTGTATTGCTGTTGT+AGG + chr3_2:86219516-86219535 Msa0433680:CDS 35.0%
TGGAAAGTCTGGTTGAAAAT+TGG + chr3_2:86219640-86219659 Msa0433680:CDS 35.0%
GGAAAGTCTGGTTGAAAATT+GGG + chr3_2:86219641-86219660 Msa0433680:CDS 35.0%
TTAGAACATCGCTACAGTAT+TGG + chr3_2:86220005-86220024 Msa0433680:intron 35.0%
GGGAAGACACTTAAAAACTA+TGG + chr3_2:86220124-86220143 Msa0433680:intron 35.0%
TTAAAAACTATGGCTGATCC+CGG + chr3_2:86220134-86220153 Msa0433680:intron 35.0%
TTGCGTCTTATATTACAGAG+GGG - chr3_2:86220211-86220230 None:intergenic 35.0%
TATTAGGTGTTAAGTTCCAC+GGG + chr3_2:86220249-86220268 Msa0433680:intron 35.0%
ACTTAATAGCAATGCTCTGT+GGG - chr3_2:86220300-86220319 None:intergenic 35.0%
AACTTAATAGCAATGCTCTG+TGG - chr3_2:86220301-86220320 None:intergenic 35.0%
! ACTTACTTGCTAGGCAATTT+CGG + chr3_2:86220374-86220393 Msa0433680:intron 35.0%
! AAAGCAGTGAGTTGAATCTT+AGG - chr3_2:86220523-86220542 None:intergenic 35.0%
AAAAATGAGTGTCTTGATGC+AGG + chr3_2:86220656-86220675 Msa0433680:intron 35.0%
ATTGCAGGATGTTCATGATA+GGG + chr3_2:86220910-86220929 Msa0433680:intron 35.0%
GCTTCTACAACACAATGTAT+CGG + chr3_2:86220949-86220968 Msa0433680:CDS 35.0%
AAATCAATCCAGACTGAATG+TGG - chr3_2:86221116-86221135 None:intergenic 35.0%
TTGGACATTTCTCAGACATA+TGG + chr3_2:86221320-86221339 Msa0433680:intron 35.0%
AAAGGATGATGATCAATGAG+GGG + chr3_2:86221472-86221491 Msa0433680:intron 35.0%
TGTGACATGATTAGAAGTCA+AGG - chr3_2:86221919-86221938 None:intergenic 35.0%
AGCACAAGTTTAGATGAATG+AGG - chr3_2:86222083-86222102 None:intergenic 35.0%
AAAGATGATGTGAGAGATAC+TGG + chr3_2:86222426-86222445 Msa0433680:CDS 35.0%
ACTACCAATATCCTTATCAG+AGG + chr3_2:86222689-86222708 Msa0433680:CDS 35.0%
CAAACCTCTGATAAGGATAT+TGG - chr3_2:86222696-86222715 None:intergenic 35.0%
TTCAAAGCAAACCTCTGATA+AGG - chr3_2:86222703-86222722 None:intergenic 35.0%
TCAATGATGCAATTGCAAGA+GGG - chr3_2:86223070-86223089 None:intergenic 35.0%
AGAACTTGAAATTAGGAGAC+TGG - chr3_2:86223157-86223176 None:intergenic 35.0%
CAAATTTGGACAAAGCTGAT+TGG - chr3_2:86223313-86223332 None:intergenic 35.0%
! CAATCAGCTTTGTCCAAATT+TGG + chr3_2:86223311-86223330 Msa0433680:CDS 35.0%
! GTATGCACCTTTAAGTTTCA+GGG - chr3_2:86223341-86223360 None:intergenic 35.0%
! AGTATGCACCTTTAAGTTTC+AGG - chr3_2:86223342-86223361 None:intergenic 35.0%
TGCATTGTTATACACTGATC+TGG - chr3_2:86223473-86223492 None:intergenic 35.0%
AGATCAGTGTATAACAATGC+AGG + chr3_2:86223472-86223491 Msa0433680:three_prime_UTR 35.0%
GATCAGTGTATAACAATGCA+GGG + chr3_2:86223473-86223492 Msa0433680:three_prime_UTR 35.0%
ATCAGTGTATAACAATGCAG+GGG + chr3_2:86223474-86223493 Msa0433680:three_prime_UTR 35.0%
AATGAATCACGATGTTGGAT+TGG - chr3_2:86223536-86223555 None:intergenic 35.0%
CATCTAATGAATCACGATGT+TGG - chr3_2:86223541-86223560 None:intergenic 35.0%
CAAGCGATTATTGTGTTCTA+CGG + chr3_2:86223637-86223656 Msa0433680:three_prime_UTR 35.0%
GGAAGATGAAGATCGATAGT+TGG - chr3_2:86214143-86214162 None:intergenic 40.0%
TCTTCATCTTCCATCCTTGT+TGG + chr3_2:86214151-86214170 Msa0433680:five_prime_UTR 40.0%
TGAGATCTAACCAACAAGGA+TGG - chr3_2:86214164-86214183 None:intergenic 40.0%
GAAGGAGATCGATTAGATTG+CGG - chr3_2:86214262-86214281 None:intergenic 40.0%
GTAAGATGAAGAGATGAGTG+AGG - chr3_2:86214311-86214330 None:intergenic 40.0%
!!! ACATTGCAATTGCCGCTTTT+TGG + chr3_2:86214388-86214407 Msa0433680:intron 40.0%
ATCAGATACTTCACTCTTCC+TGG - chr3_2:86214710-86214729 None:intergenic 40.0%
ATCGTCAAAAGAGCAAGATC+CGG - chr3_2:86214943-86214962 None:intergenic 40.0%
TCAAAGGGATTGTAAGGATC+AGG + chr3_2:86214972-86214991 Msa0433680:CDS 40.0%
! AACTTGGTGGAGTATTTGGT+TGG + chr3_2:86215048-86215067 Msa0433680:CDS 40.0%
! ACTTGGTGGAGTATTTGGTT+GGG + chr3_2:86215049-86215068 Msa0433680:CDS 40.0%
AGTATTTGGTTGGGCCTTTA+GGG + chr3_2:86215058-86215077 Msa0433680:CDS 40.0%
TAATAGTTATGTCAGGACGG+TGG + chr3_2:86215098-86215117 Msa0433680:CDS 40.0%
AGTTCTGTTCAACTTCGTGA+AGG + chr3_2:86215282-86215301 Msa0433680:intron 40.0%
CAACTTCGTGAAGGTTTAAG+AGG + chr3_2:86215291-86215310 Msa0433680:intron 40.0%
!!! ATTTTTTTGGGCCTGTGCTT+TGG + chr3_2:86215448-86215467 Msa0433680:intron 40.0%
!!! TTTTTTTGGGCCTGTGCTTT+GGG + chr3_2:86215449-86215468 Msa0433680:intron 40.0%
! TGGGCTAGAAGTTACTTAGT+TGG + chr3_2:86215468-86215487 Msa0433680:intron 40.0%
GGGCTAGAAGTTACTTAGTT+GGG + chr3_2:86215469-86215488 Msa0433680:intron 40.0%
GTTACTTAGTTGGGAAATGG+AGG + chr3_2:86215478-86215497 Msa0433680:intron 40.0%
TACTTAGTTGGGAAATGGAG+GGG + chr3_2:86215480-86215499 Msa0433680:intron 40.0%
! CCATGAGACAACTTTTTGTC+CGG - chr3_2:86215766-86215785 None:intergenic 40.0%
!! GTAGATTAGCTTGGTTCTAG+GGG - chr3_2:86215970-86215989 None:intergenic 40.0%
TGTAGTTACTGGAGAGAGAA+AGG + chr3_2:86216028-86216047 Msa0433680:intron 40.0%
GTAGTTACTGGAGAGAGAAA+GGG + chr3_2:86216029-86216048 Msa0433680:intron 40.0%
TAGTAGTTACCTCCGTAGTT+GGG + chr3_2:86216103-86216122 Msa0433680:intron 40.0%
ATCAATCCATGTCCAGTAGA+GGG - chr3_2:86216187-86216206 None:intergenic 40.0%
AATCAATCCATGTCCAGTAG+AGG - chr3_2:86216188-86216207 None:intergenic 40.0%
! TGAACTCCTTTAGAAAGCTG+AGG + chr3_2:86216926-86216945 Msa0433680:intron 40.0%
TATGCACCTCAGCTTTCTAA+AGG - chr3_2:86216935-86216954 None:intergenic 40.0%
AATGTCTTTCTCATTGTGGC+AGG + chr3_2:86217243-86217262 Msa0433680:intron 40.0%
! ATGTCTTGTGATGGAATTGG+TGG + chr3_2:86217379-86217398 Msa0433680:CDS 40.0%
CATGCTGTAGTCTATCTTCA+AGG - chr3_2:86217454-86217473 None:intergenic 40.0%
GATAGACTACAGCATGCAAA+TGG + chr3_2:86217458-86217477 Msa0433680:CDS 40.0%
CCATAGATAAAGTCAAGTGC+AGG - chr3_2:86217514-86217533 None:intergenic 40.0%
CCTGCACTTGACTTTATCTA+TGG + chr3_2:86217511-86217530 Msa0433680:CDS 40.0%
GTAGCTCACTGAATCATACA+CGG + chr3_2:86217689-86217708 Msa0433680:intron 40.0%
TAGCTCACTGAATCATACAC+GGG + chr3_2:86217690-86217709 Msa0433680:intron 40.0%
TACTTGCACCTCTAAGTCTA+AGG - chr3_2:86217795-86217814 None:intergenic 40.0%
CAGTTCCTTAAGGTTCTGTA+AGG + chr3_2:86217859-86217878 Msa0433680:intron 40.0%
TCCTTTGGTTGAAACCAGTT+TGG + chr3_2:86217971-86217990 Msa0433680:intron 40.0%
CACTCTCATTTCCTCTTCTA+TGG - chr3_2:86218261-86218280 None:intergenic 40.0%
GAGCTCATACATGGTATAAG+TGG + chr3_2:86218328-86218347 Msa0433680:intron 40.0%
! AGCTGAGCCTTATGCAAATA+TGG - chr3_2:86218600-86218619 None:intergenic 40.0%
TAAGGCTCAGCTTGATTACA+TGG + chr3_2:86218608-86218627 Msa0433680:intron 40.0%
AGCTCACTTGAGTTAAGAGA+GGG - chr3_2:86218781-86218800 None:intergenic 40.0%
!! ATAGAAGTGTTTGTAGTCCG+AGG - chr3_2:86218879-86218898 None:intergenic 40.0%
CATATGATGGCTCGTTATAC+TGG - chr3_2:86218904-86218923 None:intergenic 40.0%
CCCAATGTGCTAGAGAAAAA+AGG + chr3_2:86218999-86219018 Msa0433680:intron 40.0%
!!! CCCTTTTTTCTCTAGCACAT+TGG - chr3_2:86219003-86219022 None:intergenic 40.0%
GCTAGAGAAAAAAGGGGATT+AGG + chr3_2:86219007-86219026 Msa0433680:intron 40.0%
ATGTTGACATCCCAATTGCA+AGG + chr3_2:86219172-86219191 Msa0433680:CDS 40.0%
TGTTGACATCCCAATTGCAA+GGG + chr3_2:86219173-86219192 Msa0433680:CDS 40.0%
! CGAATTGATTCCCTTGCAAT+TGG - chr3_2:86219186-86219205 None:intergenic 40.0%
CAACAATGTCCAAGAACCTA+AGG + chr3_2:86219551-86219570 Msa0433680:CDS 40.0%
ACCAGACTTTCCAAGACATA+CGG - chr3_2:86219633-86219652 None:intergenic 40.0%
TTGGGATAGTTGGATCATGA+AGG - chr3_2:86219763-86219782 None:intergenic 40.0%
ATCATTCAAGACCAAAGAGC+CGG - chr3_2:86219839-86219858 None:intergenic 40.0%
ATATAAGACGCAATTGTGGC+TGG + chr3_2:86220218-86220237 Msa0433680:intron 40.0%
TTGCCTAGCAAGTAAGTCAT+GGG - chr3_2:86220371-86220390 None:intergenic 40.0%
ATTGCCTAGCAAGTAAGTCA+TGG - chr3_2:86220372-86220391 None:intergenic 40.0%
!! CATGAGCTTTTGTTGATTGC+AGG + chr3_2:86220895-86220914 Msa0433680:intron 40.0%
GATTGCAGGATGTTCATGAT+AGG + chr3_2:86220909-86220928 Msa0433680:intron 40.0%
TCTACAACACAATGTATCGG+TGG + chr3_2:86220952-86220971 Msa0433680:CDS 40.0%
!!! CTGAAACTGCTTGTTTTGGA+GGG - chr3_2:86220994-86221013 None:intergenic 40.0%
!!! ACTGAAACTGCTTGTTTTGG+AGG - chr3_2:86220995-86221014 None:intergenic 40.0%
! AACTTCACTGCTCTGAGTAT+CGG - chr3_2:86221023-86221042 None:intergenic 40.0%
! GCAGTAAATTTTGCCCGAAA+TGG - chr3_2:86221150-86221169 None:intergenic 40.0%
AAGGATGATGATCAATGAGG+GGG + chr3_2:86221473-86221492 Msa0433680:intron 40.0%
GGGGAGAAACACAGTTTAAA+TGG - chr3_2:86221886-86221905 None:intergenic 40.0%
AAACTTGTGCTTCTATGCCT+TGG + chr3_2:86222092-86222111 Msa0433680:intron 40.0%
GGGAAGAAATAGACAAGGAT+CGG - chr3_2:86222196-86222215 None:intergenic 40.0%
CTGAAAACTCAAATGTCCCT+CGG - chr3_2:86222302-86222321 None:intergenic 40.0%
TGGCAATCTGTCTATTAGTG+CGG + chr3_2:86222329-86222348 Msa0433680:CDS 40.0%
! TCTCACATCATCTTTTTCCG+TGG - chr3_2:86222421-86222440 None:intergenic 40.0%
GAAAATGCCAAATCTGCAAG+CGG - chr3_2:86222516-86222535 None:intergenic 40.0%
GATCATCAATTGCCAATGCT+TGG - chr3_2:86222557-86222576 None:intergenic 40.0%
! TTGGCAATTGATGATCTGCT+TGG + chr3_2:86222561-86222580 Msa0433680:CDS 40.0%
GTCAATGATGCAATTGCAAG+AGG - chr3_2:86223071-86223090 None:intergenic 40.0%
TCAATACAGTGCATTGCATC+CGG + chr3_2:86223128-86223147 Msa0433680:CDS 40.0%
GTTTCAGGGCAAACCAAATT+TGG - chr3_2:86223327-86223346 None:intergenic 40.0%
! TGGTTTGCCCTGAAACTTAA+AGG + chr3_2:86223331-86223350 Msa0433680:exon 40.0%
TCAGTGTATAACAATGCAGG+GGG + chr3_2:86223475-86223494 Msa0433680:three_prime_UTR 40.0%
AGTCGTAGAAAACATGAGTC+TGG + chr3_2:86223567-86223586 Msa0433680:three_prime_UTR 40.0%
GTCGTAGAAAACATGAGTCT+GGG + chr3_2:86223568-86223587 Msa0433680:three_prime_UTR 40.0%
TTCCGCACCAAATTTAATCG+CGG - chr3_2:86223674-86223693 None:intergenic 40.0%
GTTTGCAAGTCAACTTCCAG+TGG + chr3_2:86214219-86214238 Msa0433680:five_prime_UTR 45.0%
AAGTCAACTTCCAGTGGCTA+TGG + chr3_2:86214225-86214244 Msa0433680:exon 45.0%
TGAAGAGATGAGTGAGGGAA+CGG - chr3_2:86214305-86214324 None:intergenic 45.0%
CTCTTAGAGTCATCAGTACC+CGG - chr3_2:86214772-86214791 None:intergenic 45.0%
!! GGGTACTGATGACTCTAAGA+GGG + chr3_2:86214771-86214790 Msa0433680:CDS 45.0%
TTCGTCTCTCTTTGGTGAGA+TGG + chr3_2:86214840-86214859 Msa0433680:CDS 45.0%
AACTCCTTAATGCCAGTCCT+CGG - chr3_2:86215008-86215027 None:intergenic 45.0%
GAGTTTGTGTTCACTTCGAG+TGG + chr3_2:86215023-86215042 Msa0433680:CDS 45.0%
GAGTATTTGGTTGGGCCTTT+AGG + chr3_2:86215057-86215076 Msa0433680:CDS 45.0%
ATCTGCATCAATACACGTGG+AGG - chr3_2:86215160-86215179 None:intergenic 45.0%
GCATTTGATGCTCAATGACC+AGG + chr3_2:86215197-86215216 Msa0433680:CDS 45.0%
ATGACCAGGATACTCAGGTA+AGG + chr3_2:86215211-86215230 Msa0433680:intron 45.0%
CAATCCTTACCTGAGTATCC+TGG - chr3_2:86215218-86215237 None:intergenic 45.0%
! ATTGAGGGAGGAGCTAGTTT+AGG + chr3_2:86215416-86215435 Msa0433680:intron 45.0%
TAACTTCTAGCCCAAAGCAC+AGG - chr3_2:86215462-86215481 None:intergenic 45.0%
CGAGTATAATTCCCTGGTAC+CGG + chr3_2:86215546-86215565 Msa0433680:intron 45.0%
AAGTACATGCCTCCATGCTT+GGG - chr3_2:86215588-86215607 None:intergenic 45.0%
TAAGTACATGCCTCCATGCT+TGG - chr3_2:86215589-86215608 None:intergenic 45.0%
! AAGCATGGAGGCATGTACTT+AGG + chr3_2:86215588-86215607 Msa0433680:intron 45.0%
! AGCATGGAGGCATGTACTTA+GGG + chr3_2:86215589-86215608 Msa0433680:intron 45.0%
CCGGACAAAAAGTTGTCTCA+TGG + chr3_2:86215763-86215782 Msa0433680:intron 45.0%
GCAAGAGACTGGACAAAAAC+AGG - chr3_2:86215812-86215831 None:intergenic 45.0%
GTCATGGGATTGAACAAGAC+AGG - chr3_2:86215837-86215856 None:intergenic 45.0%
! CGGTTTCTTGGTGTAGTTAC+TGG + chr3_2:86216017-86216036 Msa0433680:intron 45.0%
CTAGTAGTTACCTCCGTAGT+TGG + chr3_2:86216102-86216121 Msa0433680:intron 45.0%
ATAGTATGATCCCCCTCTAC+TGG + chr3_2:86216172-86216191 Msa0433680:intron 45.0%
TCAATCCATGTCCAGTAGAG+GGG - chr3_2:86216186-86216205 None:intergenic 45.0%
!!! TTTTAAAATGGGAACCCCGG+AGG - chr3_2:86216999-86217018 None:intergenic 45.0%
! GTTTGCTACGTGCAGCATTA+AGG + chr3_2:86217337-86217356 Msa0433680:intron 45.0%
ATGGGCACAATGTCTTGTGA+TGG + chr3_2:86217370-86217389 Msa0433680:CDS 45.0%
!! TGCAAATGGTGCTGTTGTCT+TGG + chr3_2:86217472-86217491 Msa0433680:CDS 45.0%
TATGGCTGATGTACATCAGC+AGG + chr3_2:86217529-86217548 Msa0433680:CDS 45.0%
AGCTCACTGAATCATACACG+GGG + chr3_2:86217691-86217710 Msa0433680:intron 45.0%
GAGCTATCTGTGAGTTCCTT+TGG + chr3_2:86217819-86217838 Msa0433680:intron 45.0%
CATCGCCTTACAGAACCTTA+AGG - chr3_2:86217730-86217749 None:intergenic 45.0%
! GCCAAACTGGTTTCAACCAA+AGG - chr3_2:86217975-86217994 None:intergenic 45.0%
CCAGCTTTACTATACTGCTC+AGG - chr3_2:86218033-86218052 None:intergenic 45.0%
CCTGAGCAGTATAGTAAAGC+TGG + chr3_2:86218030-86218049 Msa0433680:intron 45.0%
! TGTTTCTGTGAGCCATCTTG+TGG + chr3_2:86218306-86218325 Msa0433680:intron 45.0%
CATGTATGAGCTCCACAAGA+TGG - chr3_2:86218321-86218340 None:intergenic 45.0%
CATCTTGTGGAGCTCATACA+TGG + chr3_2:86218319-86218338 Msa0433680:intron 45.0%
GCTCACTTGAGTTAAGAGAG+GGG - chr3_2:86218780-86218799 None:intergenic 45.0%
GAGCTCACTTGAGTTAAGAG+AGG - chr3_2:86218782-86218801 None:intergenic 45.0%
CTCTTAACTCAAGTGAGCTC+AGG + chr3_2:86218782-86218801 Msa0433680:CDS 45.0%
! GCAGTTTCTGGAGATGGAAA+AGG + chr3_2:86219266-86219285 Msa0433680:CDS 45.0%
! CTATGTTACGTCTGAAGCTC+TGG + chr3_2:86219290-86219309 Msa0433680:CDS 45.0%
ACTCTTGGGCAAAAATGCCA+GGG - chr3_2:86219342-86219361 None:intergenic 45.0%
TACTCTTGGGCAAAAATGCC+AGG - chr3_2:86219343-86219362 None:intergenic 45.0%
TGTCCAAGAACCTAAGGCTA+AGG + chr3_2:86219557-86219576 Msa0433680:CDS 45.0%
TCCGTATGTCTTGGAAAGTC+TGG + chr3_2:86219629-86219648 Msa0433680:CDS 45.0%
TCTGGTTGAAAATTGGGACG+AGG + chr3_2:86219647-86219666 Msa0433680:CDS 45.0%
! TATACCTCTAACCGGCTCTT+TGG + chr3_2:86219825-86219844 Msa0433680:intron 45.0%
ACTTCCTGATATCAACAGCC+GGG - chr3_2:86220155-86220174 None:intergenic 45.0%
GACTTCCTGATATCAACAGC+CGG - chr3_2:86220156-86220175 None:intergenic 45.0%
CTATTGTCTAGTATGACCCG+TGG - chr3_2:86220268-86220287 None:intergenic 45.0%
TTTGCCAAACTCACTAGAGC+AGG - chr3_2:86220438-86220457 None:intergenic 45.0%
GACGGAAATGCAAACTGAAC+TGG - chr3_2:86220482-86220501 None:intergenic 45.0%
! CAGTGAGTTGAATCTTAGGC+TGG - chr3_2:86220519-86220538 None:intergenic 45.0%
!! AAGATTTGGTGGCAACTGCA+AGG - chr3_2:86220573-86220592 None:intergenic 45.0%
GTGAAAATCAGCAAGACCAG+CGG - chr3_2:86220766-86220785 None:intergenic 45.0%
!!! TGGTCTTGCTGATTTTCACC+AGG + chr3_2:86220767-86220786 Msa0433680:CDS 45.0%
CTGACTTACCACATTCAGTC+TGG + chr3_2:86221105-86221124 Msa0433680:intron 45.0%
! ATGAAGCACTAACACTGCTG+AGG + chr3_2:86221192-86221211 Msa0433680:intron 45.0%
ATACATGTCGTACGTGTGTC+GGG - chr3_2:86221241-86221260 None:intergenic 45.0%
GATACATGTCGTACGTGTGT+CGG - chr3_2:86221242-86221261 None:intergenic 45.0%
GACACACGTACGACATGTAT+CGG + chr3_2:86221241-86221260 Msa0433680:intron 45.0%
ATGAAGCAGAGACTCCAACA+AGG - chr3_2:86221810-86221829 None:intergenic 45.0%
GGGAAGGGAAGAAATAGACA+AGG - chr3_2:86222201-86222220 None:intergenic 45.0%
CAGTGAACATGTAAGAAGGC+TGG - chr3_2:86222269-86222288 None:intergenic 45.0%
TTCACTGATAAGGAACACCG+AGG + chr3_2:86222282-86222301 Msa0433680:CDS 45.0%
TCACTGATAAGGAACACCGA+GGG + chr3_2:86222283-86222302 Msa0433680:CDS 45.0%
CTGTCTATTAGTGCGGAATC+CGG + chr3_2:86222336-86222355 Msa0433680:CDS 45.0%
GGATCTGCTTCTAAGTACCA+CGG + chr3_2:86222401-86222420 Msa0433680:CDS 45.0%
GTGAGAGATACTGGAAGCAA+TGG + chr3_2:86222435-86222454 Msa0433680:CDS 45.0%
TTCACAACCGCTTGCAGATT+TGG + chr3_2:86222506-86222525 Msa0433680:CDS 45.0%
!!! CAGTACAGCTTTTGGGTTGA+GGG - chr3_2:86222637-86222656 None:intergenic 45.0%
! CAGGATCCAGTACAGCTTTT+GGG - chr3_2:86222644-86222663 None:intergenic 45.0%
CATTTCTGCTGAAATGTGCC+AGG - chr3_2:86222663-86222682 None:intergenic 45.0%
CTGGCACATTTCAGCAGAAA+TGG + chr3_2:86222661-86222680 Msa0433680:CDS 45.0%
GTGATGTGGCAAGACTTTAC+TGG - chr3_2:86222783-86222802 None:intergenic 45.0%
AATGACTTTGCATGTGCCGT+AGG - chr3_2:86223109-86223128 None:intergenic 45.0%
TGATGACCAAAGCTCATCAC+AGG + chr3_2:86223271-86223290 Msa0433680:CDS 45.0%
AGAATGCCTGTGATGAGCTT+TGG - chr3_2:86223280-86223299 None:intergenic 45.0%
! AGGTGCATACTTTTGAGCTG+TGG + chr3_2:86223351-86223370 Msa0433680:three_prime_UTR 45.0%
! ACTGATCTGGTCCGTTTTAG+GGG - chr3_2:86223460-86223479 None:intergenic 45.0%
! CACTGATCTGGTCCGTTTTA+GGG - chr3_2:86223461-86223480 None:intergenic 45.0%
! ACACTGATCTGGTCCGTTTT+AGG - chr3_2:86223462-86223481 None:intergenic 45.0%
GATTGCGCCGCGATTAAATT+TGG + chr3_2:86223664-86223683 Msa0433680:three_prime_UTR 45.0%
!!! TATTTCAATTTTTTTTAAAT+AGG - chr3_2:86216701-86216720 None:intergenic 5.0%
!! TAAAAAAAAAAAAAAAGATT+TGG - chr3_2:86220587-86220606 None:intergenic 5.0%
!!! TTTTTAATTTGATAAATAAT+AGG + chr3_2:86220601-86220620 Msa0433680:intron 5.0%
!! TTGACTTGCAAACGCTCCTC+GGG - chr3_2:86214212-86214231 None:intergenic 50.0%
!! GTTGACTTGCAAACGCTCCT+CGG - chr3_2:86214213-86214232 None:intergenic 50.0%
GGAGATCGATTAGATTGCGG+TGG - chr3_2:86214259-86214278 None:intergenic 50.0%
!! CGGGTACTGATGACTCTAAG+AGG + chr3_2:86214770-86214789 Msa0433680:CDS 50.0%
AATGCCAGTCCTCGGATCAT+CGG - chr3_2:86215000-86215019 None:intergenic 50.0%
! TGATCCGAGGACTGGCATTA+AGG + chr3_2:86215001-86215020 Msa0433680:CDS 50.0%
TTCACTTCGAGTGGCGAACT+TGG + chr3_2:86215032-86215051 Msa0433680:CDS 50.0%
! GGCGAACTTGGTGGAGTATT+TGG + chr3_2:86215044-86215063 Msa0433680:CDS 50.0%
TCCTTCAACCCTGACCCTAA+AGG - chr3_2:86215075-86215094 None:intergenic 50.0%
GCTCAATGACCAGGATACTC+AGG + chr3_2:86215206-86215225 Msa0433680:CDS 50.0%
AGTTGGGAAATGGAGGGGTT+TGG + chr3_2:86215485-86215504 Msa0433680:intron 50.0%
CCAATCACTATCCGGTACCA+GGG - chr3_2:86215560-86215579 None:intergenic 50.0%
ACCAATCACTATCCGGTACC+AGG - chr3_2:86215561-86215580 None:intergenic 50.0%
GGGAACGACCAATCACTATC+CGG - chr3_2:86215568-86215587 None:intergenic 50.0%
! TGATTGGTCGTTCCCAAGCA+TGG + chr3_2:86215573-86215592 Msa0433680:intron 50.0%
CAAGACAGGTAGCAAGAGAC+TGG - chr3_2:86215823-86215842 None:intergenic 50.0%
AGAGCCAAAGCTCCCAACTA+CGG - chr3_2:86216118-86216137 None:intergenic 50.0%
CAATCCATGTCCAGTAGAGG+GGG - chr3_2:86216185-86216204 None:intergenic 50.0%
!! CTCTGAGGTGGTTGACTCTA+AGG - chr3_2:86216814-86216833 None:intergenic 50.0%
CTTAGAGTCAACCACCTCAG+AGG + chr3_2:86216812-86216831 Msa0433680:CDS 50.0%
GCTCACTGAATCATACACGG+GGG + chr3_2:86217692-86217711 Msa0433680:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_2:86217734-86217753 Msa0433680:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_2:86217734-86217753 Msa0433680:intron 50.0%
GAGCTATCTGCGTGTTCCTT+TGG + chr3_2:86217956-86217975 Msa0433680:intron 50.0%
TACGGTGAACTGAGCCAAAC+TGG - chr3_2:86217988-86218007 None:intergenic 50.0%
TCAAGTGAGCTCAGGAAGTC+CGG + chr3_2:86218790-86218809 Msa0433680:CDS 50.0%
TCTAAGCCACCTGCATCTCT+TGG + chr3_2:86218829-86218848 Msa0433680:CDS 50.0%
GCATTACCAAGAGATGCAGG+TGG - chr3_2:86218838-86218857 None:intergenic 50.0%
CACGCATTACCAAGAGATGC+AGG - chr3_2:86218841-86218860 None:intergenic 50.0%
AGGGAATCAATTCGGGCTGT+TGG + chr3_2:86219192-86219211 Msa0433680:CDS 50.0%
! TGATCGGCTTCTGCAGTTTC+TGG + chr3_2:86219254-86219273 Msa0433680:CDS 50.0%
! GCTTCTGCAGTTTCTGGAGA+TGG + chr3_2:86219260-86219279 Msa0433680:CDS 50.0%
!! CTGCCTTAGCCTTAGGTTCT+TGG - chr3_2:86219563-86219582 None:intergenic 50.0%
! ATGAGAGCTGCCTTAGCCTT+AGG - chr3_2:86219570-86219589 None:intergenic 50.0%
AGGCTAAGGCAGCTCTCATA+TGG + chr3_2:86219571-86219590 Msa0433680:CDS 50.0%
GCAGCTCTCATATGGATGCT+GGG + chr3_2:86219579-86219598 Msa0433680:CDS 50.0%
CAGCTCTCATATGGATGCTG+GGG + chr3_2:86219580-86219599 Msa0433680:CDS 50.0%
AGCTCTCATATGGATGCTGG+GGG + chr3_2:86219581-86219600 Msa0433680:CDS 50.0%
GCATGATGCTCCGTATGTCT+TGG + chr3_2:86219620-86219639 Msa0433680:CDS 50.0%
AAGACCAAAGAGCCGGTTAG+AGG - chr3_2:86219832-86219851 None:intergenic 50.0%
TGATCCCGGCTGTTGATATC+AGG + chr3_2:86220148-86220167 Msa0433680:intron 50.0%
ATTACAGAGGGGACGACTTC+TGG - chr3_2:86220200-86220219 None:intergenic 50.0%
GTGGCTGGAGCCTTGATATT+AGG + chr3_2:86220233-86220252 Msa0433680:intron 50.0%
CTGCCCATGACTTACTTGCT+AGG + chr3_2:86220365-86220384 Msa0433680:intron 50.0%
CAGTCCTGCTCTAGTGAGTT+TGG + chr3_2:86220431-86220450 Msa0433680:intron 50.0%
! GCATTTCCGTCTGCTTTGAG+CGG + chr3_2:86220491-86220510 Msa0433680:intron 50.0%
TCCCAGTGCTTTCTGAGTCT+CGG - chr3_2:86220733-86220752 None:intergenic 50.0%
GCACTAACACTGCTGAGGTT+AGG + chr3_2:86221197-86221216 Msa0433680:intron 50.0%
CGATGTTGACGTCTCCTTGT+TGG + chr3_2:86221793-86221812 Msa0433680:intron 50.0%
! TGCTTCTATGCCTTGGCTTG+AGG + chr3_2:86222099-86222118 Msa0433680:intron 50.0%
! GCTTCTATGCCTTGGCTTGA+GGG + chr3_2:86222100-86222119 Msa0433680:intron 50.0%
CGCAGGAACAACAGAATCTC+CGG - chr3_2:86222358-86222377 None:intergenic 50.0%
GAGAGTGGAGGCAAATGACA+AGG + chr3_2:86222380-86222399 Msa0433680:CDS 50.0%
TGAAGGGGCAGACCCATTAT+AGG - chr3_2:86222481-86222500 None:intergenic 50.0%
!!! TTTTGGGTTGAGGGTCAACG+GGG - chr3_2:86222628-86222647 None:intergenic 50.0%
!!! CTTTTGGGTTGAGGGTCAAC+GGG - chr3_2:86222629-86222648 None:intergenic 50.0%
!!! GCTTTTGGGTTGAGGGTCAA+CGG - chr3_2:86222630-86222649 None:intergenic 50.0%
!!! CCAGTACAGCTTTTGGGTTG+AGG - chr3_2:86222638-86222657 None:intergenic 50.0%
CCTCAACCCAAAAGCTGTAC+TGG + chr3_2:86222635-86222654 Msa0433680:CDS 50.0%
! CCAGGATCCAGTACAGCTTT+TGG - chr3_2:86222645-86222664 None:intergenic 50.0%
CCAAAAGCTGTACTGGATCC+TGG + chr3_2:86222642-86222661 Msa0433680:CDS 50.0%
! ATGTGCCGTAGGAGTGCATT+GGG - chr3_2:86223098-86223117 None:intergenic 50.0%
ATACAGTGCATTGCATCCGG+CGG + chr3_2:86223131-86223150 Msa0433680:CDS 50.0%
CTAATCCCCCTCCCCTAAAA+CGG + chr3_2:86223446-86223465 Msa0433680:three_prime_UTR 50.0%
!!! ATCTGGTCCGTTTTAGGGGA+GGG - chr3_2:86223456-86223475 None:intergenic 50.0%
TCTGGGTTGCAAGTGTGTAG+AGG + chr3_2:86223585-86223604 Msa0433680:three_prime_UTR 50.0%
! CGCCGCGATTAAATTTGGTG+CGG + chr3_2:86223669-86223688 Msa0433680:three_prime_UTR 50.0%
! CTAATGATGCAAGGTGCCTG+CGG + chr3_2:86223731-86223750 Msa0433680:three_prime_UTR 50.0%
GCTAAAAAAGGAGACACCGC+AGG - chr3_2:86223750-86223769 None:intergenic 50.0%
CGACGTAGTAGAAGCTGACG+TGG - chr3_2:86213995-86214014 None:intergenic 55.0%
CGATTAGATTGCGGTGGTGC+AGG - chr3_2:86214253-86214272 None:intergenic 55.0%
TTACAGCTACGGCAGCTTGC+TGG + chr3_2:86214736-86214755 Msa0433680:CDS 55.0%
! TACAGCTACGGCAGCTTGCT+GGG + chr3_2:86214737-86214756 Msa0433680:CDS 55.0%
GATCAGGATCCGATGATCCG+AGG + chr3_2:86214988-86215007 Msa0433680:CDS 55.0%
ACTTCGAGTGGCGAACTTGG+TGG + chr3_2:86215035-86215054 Msa0433680:CDS 55.0%
!! TTGGTTGGGCCTTTAGGGTC+AGG + chr3_2:86215063-86215082 Msa0433680:CDS 55.0%
!! TGGTTGGGCCTTTAGGGTCA+GGG + chr3_2:86215064-86215083 Msa0433680:CDS 55.0%
!! GCCTTTAGGGTCAGGGTTGA+AGG + chr3_2:86215071-86215090 Msa0433680:CDS 55.0%
GTCAGGACGGTGGCAGTAAT+CGG + chr3_2:86215108-86215127 Msa0433680:CDS 55.0%
! CCCTGGTACCGGATAGTGAT+TGG + chr3_2:86215557-86215576 Msa0433680:intron 55.0%
TTGGTCGTTCCCAAGCATGG+AGG + chr3_2:86215576-86215595 Msa0433680:intron 55.0%
ACCTCCGTAGTTGGGAGCTT+TGG + chr3_2:86216111-86216130 Msa0433680:intron 55.0%
TGATCCCCCTCTACTGGACA+TGG + chr3_2:86216178-86216197 Msa0433680:intron 55.0%
CACCTCAGAGGAAGCAGCTA+GGG + chr3_2:86216824-86216843 Msa0433680:CDS 55.0%
GCTTCAAAACCACCCTCCTC+CGG + chr3_2:86216980-86216999 Msa0433680:intron 55.0%
CTTCAAAACCACCCTCCTCC+GGG + chr3_2:86216981-86217000 Msa0433680:intron 55.0%
TTCAAAACCACCCTCCTCCG+GGG + chr3_2:86216982-86217001 Msa0433680:intron 55.0%
AAAATGGGAACCCCGGAGGA+GGG - chr3_2:86216995-86217014 None:intergenic 55.0%
TAAAATGGGAACCCCGGAGG+AGG - chr3_2:86216996-86217015 None:intergenic 55.0%
GGCAGCTCTCATATGGATGC+TGG + chr3_2:86219578-86219597 Msa0433680:CDS 55.0%
ACGACTTCTGGCACTAGAGC+TGG - chr3_2:86220188-86220207 None:intergenic 55.0%
CTGGTTCCGCTCAAAGCAGA+CGG - chr3_2:86220500-86220519 None:intergenic 55.0%
AGTGCTTTCTGAGTCTCGGG+GGG - chr3_2:86220729-86220748 None:intergenic 55.0%
CAGTGCTTTCTGAGTCTCGG+GGG - chr3_2:86220730-86220749 None:intergenic 55.0%
CCAGTGCTTTCTGAGTCTCG+GGG - chr3_2:86220731-86220750 None:intergenic 55.0%
CCCAGTGCTTTCTGAGTCTC+GGG - chr3_2:86220732-86220751 None:intergenic 55.0%
!! CCCGAGACTCAGAAAGCACT+GGG + chr3_2:86220729-86220748 Msa0433680:CDS 55.0%
! TGTATCGGTGGCTGAGAGTG+TGG + chr3_2:86220964-86220983 Msa0433680:CDS 55.0%
AAGCTGTAGCCCTCAAGCCA+AGG - chr3_2:86222112-86222131 None:intergenic 55.0%
GAGGGCTACAGCTTACACTG+TGG + chr3_2:86222118-86222137 Msa0433680:intron 55.0%
GCTACAGCTTACACTGTGGC+AGG + chr3_2:86222122-86222141 Msa0433680:intron 55.0%
TGTTGTTCCTGCGCAGAGAG+TGG + chr3_2:86222365-86222384 Msa0433680:CDS 55.0%
GGGGCAGACCCATTATAGGA+AGG - chr3_2:86222477-86222496 None:intergenic 55.0%
CGGTTGTGAAGCTGCTGAAG+GGG - chr3_2:86222496-86222515 None:intergenic 55.0%
GCGGTTGTGAAGCTGCTGAA+GGG - chr3_2:86222497-86222516 None:intergenic 55.0%
AGCGGTTGTGAAGCTGCTGA+AGG - chr3_2:86222498-86222517 None:intergenic 55.0%
! CAATGCTTGGCTAGTCGTGC+TGG - chr3_2:86222544-86222563 None:intergenic 55.0%
! CAGCACGACTAGCCAAGCAT+TGG + chr3_2:86222542-86222561 Msa0433680:CDS 55.0%
!! TTTGGGTTGAGGGTCAACGG+GGG - chr3_2:86222627-86222646 None:intergenic 55.0%
CGACTCCCAATGCACTCCTA+CGG + chr3_2:86223090-86223109 Msa0433680:CDS 55.0%
! CATGTGCCGTAGGAGTGCAT+TGG - chr3_2:86223099-86223118 None:intergenic 55.0%
! GAAATTAGGAGACTGGCCGC+CGG - chr3_2:86223150-86223169 None:intergenic 55.0%
! TTAGGGGAGGGGGATTAGTG+TGG - chr3_2:86223444-86223463 None:intergenic 55.0%
!!! TCTGGTCCGTTTTAGGGGAG+GGG - chr3_2:86223455-86223474 None:intergenic 55.0%
!!! GATCTGGTCCGTTTTAGGGG+AGG - chr3_2:86223457-86223476 None:intergenic 55.0%
AAGACGGCGCGAATTTCCCG+AGG + chr3_2:86214193-86214212 Msa0433680:five_prime_UTR 60.0%
GATGAGTGAGGGAACGGACC+CGG - chr3_2:86214299-86214318 None:intergenic 60.0%
GGATCCGATGATCCGAGGAC+TGG + chr3_2:86214993-86215012 Msa0433680:CDS 60.0%
GCCAAAGCTCCCAACTACGG+AGG - chr3_2:86216115-86216134 None:intergenic 60.0%
! CCTAGCTGCTTCCTCTGAGG+TGG - chr3_2:86216826-86216845 None:intergenic 60.0%
CCACCTCAGAGGAAGCAGCT+AGG + chr3_2:86216823-86216842 Msa0433680:CDS 60.0%
CTCCCTAGCTGCTTCCTCTG+AGG - chr3_2:86216829-86216848 None:intergenic 60.0%
! CCCCGAGACTCAGAAAGCAC+TGG + chr3_2:86220728-86220747 Msa0433680:CDS 60.0%
!! GAAAGCACTGGGAGCTGCAC+TGG + chr3_2:86220740-86220759 Msa0433680:CDS 60.0%
GGTTAGGCGTGTCCCCATGT+CGG + chr3_2:86221213-86221232 Msa0433680:intron 60.0%
TGTTCCTGCGCAGAGAGTGG+AGG + chr3_2:86222368-86222387 Msa0433680:CDS 60.0%
TTTGCCTCCACTCTCTGCGC+AGG - chr3_2:86222375-86222394 None:intergenic 60.0%
!!! CTGGTCCGTTTTAGGGGAGG+GGG - chr3_2:86223454-86223473 None:intergenic 60.0%
GGTGCAGGAGCCATAGCCAC+TGG - chr3_2:86214238-86214257 None:intergenic 65.0%
AGTGAGGGAACGGACCCGGA+CGG - chr3_2:86214295-86214314 None:intergenic 65.0%
! GCTTGCTGGGAGTCGAGCTC+CGG + chr3_2:86214750-86214769 Msa0433680:CDS 65.0%
CTTGCTGGGAGTCGAGCTCC+GGG + chr3_2:86214751-86214770 Msa0433680:CDS 65.0%
!! GGACGAGGAGCATTCTGCCG+AGG + chr3_2:86219662-86219681 Msa0433680:CDS 65.0%
!! GTGTGTCGGGCACCGACATG+GGG - chr3_2:86221228-86221247 None:intergenic 65.0%
!! CGTGTGTCGGGCACCGACAT+GGG - chr3_2:86221229-86221248 None:intergenic 65.0%
!! ACGTGTGTCGGGCACCGACA+TGG - chr3_2:86221230-86221249 None:intergenic 65.0%
AGGGTCAACGGGGGAGGTGA+CGG - chr3_2:86222618-86222637 None:intergenic 65.0%
CCTTCGCCGTCGCAACCGTC+CGG + chr3_2:86214277-86214296 Msa0433680:CDS 70.0%
CTTCGCCGTCGCAACCGTCC+GGG + chr3_2:86214278-86214297 Msa0433680:CDS 70.0%
ACGGACCCGGACGGTTGCGA+CGG - chr3_2:86214286-86214305 None:intergenic 70.0%
ATGGGAACCCCGGAGGAGGG+TGG - chr3_2:86216992-86217011 None:intergenic 70.0%
GGGTTGAGGGTCAACGGGGG+AGG - chr3_2:86222624-86222643 None:intergenic 70.0%
CCGGACGGTTGCGACGGCGA+AGG - chr3_2:86214280-86214299 None:intergenic 75.0%
! CTGGGAGCTGCACTGGCCGC+TGG + chr3_2:86220747-86220766 Msa0433680:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 86213941 86223770 86213941 ID=Msa0433680;Name=Msa0433680
chr3_2 mRNA 86213941 86223770 86213941 ID=Msa0433680-mRNA-1;Parent=Msa0433680;Name=Msa0433680-mRNA-1;_AED=0.06;_eAED=0.06;_QI=303|1|1|1|1|1|11|427|840
chr3_2 exon 86213941 86214299 86213941 ID=Msa0433680-mRNA-1:exon:24855;Parent=Msa0433680-mRNA-1
chr3_2 exon 86214711 86215227 86214711 ID=Msa0433680-mRNA-1:exon:24856;Parent=Msa0433680-mRNA-1
chr3_2 exon 86216771 86216895 86216771 ID=Msa0433680-mRNA-1:exon:24857;Parent=Msa0433680-mRNA-1
chr3_2 exon 86217352 86217550 86217352 ID=Msa0433680-mRNA-1:exon:24858;Parent=Msa0433680-mRNA-1
chr3_2 exon 86218758 86218986 86218758 ID=Msa0433680-mRNA-1:exon:24859;Parent=Msa0433680-mRNA-1
chr3_2 exon 86219145 86219311 86219145 ID=Msa0433680-mRNA-1:exon:24860;Parent=Msa0433680-mRNA-1
chr3_2 exon 86219474 86219683 86219474 ID=Msa0433680-mRNA-1:exon:24861;Parent=Msa0433680-mRNA-1
chr3_2 exon 86220678 86220788 86220678 ID=Msa0433680-mRNA-1:exon:24862;Parent=Msa0433680-mRNA-1
chr3_2 exon 86220917 86221093 86220917 ID=Msa0433680-mRNA-1:exon:24863;Parent=Msa0433680-mRNA-1
chr3_2 exon 86222270 86222710 86222270 ID=Msa0433680-mRNA-1:exon:24864;Parent=Msa0433680-mRNA-1
chr3_2 exon 86223053 86223770 86223053 ID=Msa0433680-mRNA-1:exon:24865;Parent=Msa0433680-mRNA-1
chr3_2 five_prime_UTR 86213941 86214243 86213941 ID=Msa0433680-mRNA-1:five_prime_utr;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86214244 86214299 86214244 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86214711 86215227 86214711 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86216771 86216895 86216771 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86217352 86217550 86217352 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86218758 86218986 86218758 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86219145 86219311 86219145 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86219474 86219683 86219474 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86220678 86220788 86220678 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86220917 86221093 86220917 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86222270 86222710 86222270 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 CDS 86223053 86223343 86223053 ID=Msa0433680-mRNA-1:cds;Parent=Msa0433680-mRNA-1
chr3_2 three_prime_UTR 86223344 86223770 86223344 ID=Msa0433680-mRNA-1:three_prime_utr;Parent=Msa0433680-mRNA-1
Gene Sequence

>Msa0433680

ATGGCTCCTGCACCACCGCAATCTAATCGATCTCCTTCGCCGTCGCAACCGTCCGGGAAGAGTGAAGTATCTGATCTAAAATTACAGCTACGGCAGCTTGCTGGGAGTCGAGCTCCGGGTACTGATGACTCTAAGAGGGATCTTTACAAGAAGGTGATATCAAACATGACTATAGGTATTGATGTTTCGTCTCTCTTTGGTGAGATGGTAATGTGTTCAGCAACATCAGACATTGTTTTGAAGAAAATGTGTTACCTGTATGTTGGAAACTATGCTAAGGTTAATCCGGATCTTGCTCTTTTGACGATTAATTTTCTTCAAAGGGATTGTAAGGATCAGGATCCGATGATCCGAGGACTGGCATTAAGGAGTTTGTGTTCACTTCGAGTGGCGAACTTGGTGGAGTATTTGGTTGGGCCTTTAGGGTCAGGGTTGAAGGATAATAATAGTTATGTCAGGACGGTGGCAGTAATCGGTGTTTTGAAACTGTATCACATATCAGCCTCCACGTGTATTGATGCAGATTTTCCAGAAACGTTGAAGCATTTGATGCTCAATGACCAGGATACTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCAACCACCTCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTGCATAGCAAGCCAATTGTTTATTACCTTCTGAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTTGTGATGGAATTGGTGGCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTACAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACAAAAGTATTCCTGCACTTGACTTTATCTATGGCTGATGTACATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCGGAACAATCTTATGCAATTCTAAGCCACCTGCATCTCTTGGTAATGCGTGCACCATATATATTTTCCTCGGACTACAAACACTTCTATTGCCAGTATAACGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTTGACATCCCAATTGCAAGGGAATCAATTCGGGCTGTTGGAAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGGCTTCTGCAGTTTCTGGAGATGGAAAAGGACTATGTTACGTCTGAAGCTCTGGTGCTTGTGAAAGATCTTCTAAGAAAATATCCTCAATGGAGTCAAGATTGTATTGCTGTTGTAGGGAATATCAGTAGCAACAATGTCCAAGAACCTAAGGCTAAGGCAGCTCTCATATGGATGCTGGGGGAATATTCTCAAGACATGCATGATGCTCCGTATGTCTTGGAAAGTCTGGTTGAAAATTGGGACGAGGAGCATTCTGCCGAGGTTCGCTTGCATCTTCTTACTGCAGTAATGAAGTGTTTCTTTAAGAGACCCCCCGAGACTCAGAAAGCACTGGGAGCTGCACTGGCCGCTGGTCTTGCTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTACAACACAATGTATCGGTGGCTGAGAGTGTGGTGAACCCTCCAAAACAAGCAGTTTCAGTATTTGCCGATACTCAGAGCAGTGAAGTTAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACATTTGAGTTTTCAGATGAACTTGGCAATCTGTCTATTAGTGCGGAATCCGGAGATTCTGTTGTTCCTGCGCAGAGAGTGGAGGCAAATGACAAGGATCTGCTTCTAAGTACCACGGAAAAAGATGATGTGAGAGATACTGGAAGCAATGGTTCTGCCTATAATGCTCCTTCCTATAATGGGTCTGCCCCTTCAGCAGCTTCACAACCGCTTGCAGATTTGGCATTTTCAAGTACCAGCACGACTAGCCAAGCATTGGCAATTGATGATCTGCTTGGTTTAGATTTTTCAGTTGGGACTGTAAGCACACCGTCACCTCCCCCGTTGACCCTCAACCCAAAAGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTACCAATATCCTTATCAGAGGAATATTCTTTAAGCCCTCTTGCAATTGCATCATTGACGACTCCCAATGCACTCCTACGGCACATGCAAAGTCATTCAATACAGTGCATTGCATCCGGCGGCCAGTCTCCTAATTTCAAGTTCTTTTTCTTTGCTCAAAAAGCAGAAGAAACATCAATATATCTTGTAGAGTGTATAATCAACACATCATCCGCCAAGTCACAGATTAAAATAAAGGCTGATGACCAAAGCTCATCACAGGCATTCTCAACATTATTCCAATCAGCTTTGTCCAAATTTGGTTTGCCCTGA
Protein sequence

>Msa0433680

MAPAPPQSNRSPSPSQPSGKSEVSDLKLQLRQLAGSRAPGTDDSKRDLYKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPETLKHLMLNDQDTQVVANCLSALQEIWTLESTTSEEAARERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSNNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQHNVSVAESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAESGDSVVPAQRVEANDKDLLLSTTEKDDVRDTGSNGSAYNAPSYNGSAPSAASQPLADLAFSSTSTTSQALAIDDLLGLDFSVGTVSTPSPPPLTLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPLAIASLTTPNALLRHMQSHSIQCIASGGQSPNFKFFFFAQKAEETSIYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP*