AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0521580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521580 MtrunA17_Chr3g0139471 98.460 844 9 1 1 840 1 844 0.0 1713
Msa0521580 MtrunA17_Chr4g0038901 33.520 713 407 16 18 718 12 669 4.94e-107 350
Msa0521580 MtrunA17_Chr5g0435291 26.415 212 142 2 42 253 46 243 3.77e-17 86.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0521580 AT5G11490.1 80.166 842 164 3 1 840 1 841 0.0 1397
Msa0521580 AT5G11490.2 80.215 839 163 3 1 837 1 838 0.0 1391
Msa0521580 AT5G11490.3 79.847 784 156 2 56 837 1 784 0.0 1304
Msa0521580 AT4G23460.1 36.093 604 362 12 18 616 12 596 3.85e-108 353
Msa0521580 AT4G11380.1 35.285 615 372 11 18 627 12 605 1.01e-105 347
Msa0521580 AT4G11380.2 35.932 590 359 10 43 627 52 627 4.41e-105 345
Msa0521580 AT4G23460.2 34.893 513 317 11 109 616 2 502 2.89e-83 284
Msa0521580 AT3G55480.2 30.556 144 98 1 45 188 49 190 2.13e-13 75.1
Msa0521580 AT3G55480.2 23.721 430 271 17 275 671 351 756 4.43e-13 73.9
Msa0521580 AT3G55480.1 23.721 430 271 17 275 671 223 628 2.87e-13 74.3

Find 241 sgRNAs with CRISPR-Local

Find 648 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGATCGGCTTCTGCAGTTTC+TGG 0.097421 3_4:+74488055 Msa0521580:CDS
CAATCAGCTTTGTCCAAATT+TGG 0.125872 3_4:+74492085 Msa0521580:CDS
GAGTATTTGGTTGGGCCTTT+AGG 0.153079 3_4:+74483855 Msa0521580:CDS
TGTCTGCTTTACAAGAAATT+TGG 0.157651 3_4:+74485588 Msa0521580:CDS
AGTATGCACCATTAAGTTTC+AGG 0.189588 3_4:-74492113 None:intergenic
GTTTCAGGGCAAACCAAATT+TGG 0.200113 3_4:-74492098 None:intergenic
ATCAAATGCTTCAACGTTTC+TGG 0.203616 3_4:-74483981 None:intergenic
GATTGCGCCGCGATTAAATT+TGG 0.205518 3_4:+74492438 Msa0521580:three_prime_UTR
AGTCGACAATAATGAAATTT+TGG 0.209614 3_4:+74492148 Msa0521580:three_prime_UTR
TGGAAAGTCTGGTTGAAAAT+TGG 0.212595 3_4:+74488441 Msa0521580:CDS
CTGCCTTAGCCTTAGGTTCT+TGG 0.226571 3_4:-74488361 None:intergenic
CCAGGATCCAGTACAGCTTT+TGG 0.231595 3_4:-74491416 None:intergenic
TATAATGCTCCTTCCTATAA+TGG 0.233272 3_4:+74491239 Msa0521580:CDS
CCTGCACTTGACTTTATCTA+TGG 0.262839 3_4:+74486312 Msa0521580:CDS
AGTATTTGGTTGGGCCTTTA+GGG 0.273406 3_4:+74483856 Msa0521580:CDS
TTCACAACCGCTTGCAGATT+TGG 0.280848 3_4:+74491280 Msa0521580:CDS
TGGTTTGCCCTGAAACTTAA+TGG 0.282228 3_4:+74492105 Msa0521580:exon
TTGGTTGGGCCTTTAGGGTC+AGG 0.291482 3_4:+74483861 Msa0521580:CDS
CTCTGAGGTGGTTGACTCTA+AGG 0.294624 3_4:-74485612 None:intergenic
ATTATAGGAAGGAGCATTAT+AGG 0.298629 3_4:-74491237 None:intergenic
CGAATTGATTCCCTTGCAAT+TGG 0.305678 3_4:-74487984 None:intergenic
GTTTGCTACGTGCAGCATTA+AGG 0.317331 3_4:+74486138 Msa0521580:intron
CATATGATGGCTCGTTATAC+TGG 0.328980 3_4:-74487702 None:intergenic
CAAACCTCTGATAAGGATAT+TGG 0.329700 3_4:-74491467 None:intergenic
ATTGATGTTGAAATGTGATT+TGG 0.330843 3_4:+74492467 Msa0521580:three_prime_UTR
GGCGAACTTGGTGGAGTATT+TGG 0.333179 3_4:+74483842 Msa0521580:CDS
CCCAGTGCTTTCTGAGTCTC+GGG 0.337763 3_4:-74489542 None:intergenic
ATTGATGTTTCGTCTCTCTT+TGG 0.342308 3_4:+74483630 Msa0521580:CDS
TAGAAGCCTGTAATAAAATA+AGG 0.343419 3_4:-74489746 None:intergenic
AAAGATGATGTGAGAGATAC+TGG 0.345708 3_4:+74491200 Msa0521580:CDS
AATACGGAAACTGCTTGTTT+TGG 0.348511 3_4:-74489808 None:intergenic
CAAGATTGTATTGCTGTTGT+AGG 0.357677 3_4:+74488317 Msa0521580:CDS
TAAAGAAATGGAGATAGATA+TGG 0.360957 3_4:+74492189 Msa0521580:three_prime_UTR
TTACAGCTACGGCAGCTTGC+TGG 0.364785 3_4:+74483534 Msa0521580:CDS
GGAAAGTCTGGTTGAAAATT+GGG 0.365049 3_4:+74488442 Msa0521580:CDS
TCTTCATCTTCCATCCTTGT+TGG 0.365176 3_4:+74482949 Msa0521580:five_prime_UTR
TGAAGGGGCAGACCCATTAT+AGG 0.369778 3_4:-74491252 None:intergenic
GCCTTTAGGGTCAGGGTTGA+AGG 0.371889 3_4:+74483869 Msa0521580:CDS
TCCCAGTGCTTTCTGAGTCT+CGG 0.372039 3_4:-74489543 None:intergenic
AGAATTGCATAAGATTGTTC+CGG 0.387819 3_4:-74487610 None:intergenic
CAAATTTGGACAAAGCTGAT+TGG 0.388207 3_4:-74492084 None:intergenic
CAATTGCAAGGGAATCAATT+CGG 0.388565 3_4:+74487985 Msa0521580:CDS
CAAGTCACAGATTAAAATAA+AGG 0.389674 3_4:+74492021 Msa0521580:CDS
TGATCCGAGGACTGGCATTA+AGG 0.389716 3_4:+74483799 Msa0521580:CDS
GCTTGCTGGGAGTCGAGCTC+CGG 0.391372 3_4:+74483548 Msa0521580:CDS
AGTCGTAGAAAACATGAGTC+TGG 0.394316 3_4:+74492341 Msa0521580:three_prime_UTR
CCTTCGCCGTCGCAACCGTC+CGG 0.396107 3_4:+74483075 Msa0521580:CDS
TTCAGAAGGTAATAAACAAT+TGG 0.400938 3_4:-74485671 None:intergenic
CTGGGAGCTGCACTGGCCGC+TGG 0.402711 3_4:+74489560 Msa0521580:CDS
TTCTTACATGTTCACTGATA+AGG 0.403515 3_4:+74491046 Msa0521580:CDS
AACTTGGTGGAGTATTTGGT+TGG 0.409463 3_4:+74483846 Msa0521580:CDS
TAGTCCGAGGAAAATATATA+TGG 0.418519 3_4:-74487664 None:intergenic
ATGAGAGCTGCCTTAGCCTT+AGG 0.418866 3_4:-74488368 None:intergenic
CTGGCACATTTCAGCAGAAA+TGG 0.420622 3_4:+74491435 Msa0521580:CDS
CCAGTTTGGAGATCTTGTGC+TGG 0.421069 3_4:+74482730 None:intergenic
GAAAGTAACACCTATGAGAT+AGG 0.421261 3_4:+74487766 Msa0521580:CDS
TCAAAGGGATTGTAAGGATC+AGG 0.422298 3_4:+74483770 Msa0521580:CDS
CGATTAGATTGCGGTGGTGC+AGG 0.423507 3_4:-74483048 None:intergenic
GATTGCAGGATGTTCATGAT+AGG 0.426072 3_4:+74489722 Msa0521580:intron
TTGTTTATTACCTTCTGAAT+CGG 0.426616 3_4:+74485675 Msa0521580:CDS
GAAAGCACTGGGAGCTGCAC+TGG 0.427199 3_4:+74489553 Msa0521580:CDS
ATAATGCTCCTTCCTATAAT+GGG 0.428702 3_4:+74491240 Msa0521580:CDS
GTCAGGACGGTGGCAGTAAT+CGG 0.429251 3_4:+74483906 Msa0521580:CDS
CATGCTGTAGTCTATCTTCA+AGG 0.433221 3_4:-74486252 None:intergenic
CTATGTTACGTCTGAAGCTC+TGG 0.434441 3_4:+74488091 Msa0521580:CDS
GGCAGCTCTCATATGGATGC+TGG 0.436064 3_4:+74488379 Msa0521580:CDS
CAGTTTGGAGATCTTGTGCT+GGG 0.437353 3_4:+74482731 None:intergenic
GTGATATCAAACATGACTAT+AGG 0.444966 3_4:+74483606 Msa0521580:CDS
TGGTTGGGCCTTTAGGGTCA+GGG 0.446084 3_4:+74483862 Msa0521580:CDS
CCTCAACCCAAAAGCTGTAC+TGG 0.447071 3_4:+74491409 Msa0521580:CDS
AGGCTAAGGCAGCTCTCATA+TGG 0.449590 3_4:+74488372 Msa0521580:CDS
GCAGTTTCTGGAGATGGAAA+AGG 0.450968 3_4:+74488067 Msa0521580:CDS
CAAGCGATTATTGTGTTCTA+CGG 0.451804 3_4:+74492411 Msa0521580:three_prime_UTR
GGAAGATGAAGATCGATAGT+TGG 0.452818 3_4:-74482938 None:intergenic
TGCATCATTAGATATAGAAA+AGG 0.453336 3_4:-74492492 None:intergenic
CTGTCTATTAGTGCGGAATC+CGG 0.457717 3_4:+74491110 Msa0521580:CDS
TCCGTATGTCTTGGAAAGTC+TGG 0.465126 3_4:+74488430 Msa0521580:CDS
TACAGCTACGGCAGCTTGCT+GGG 0.465832 3_4:+74483535 Msa0521580:CDS
TTGACTTGCAAACGCTCCTC+GGG 0.466257 3_4:-74483007 None:intergenic
TTCGTCTCTCTTTGGTGAGA+TGG 0.466707 3_4:+74483638 Msa0521580:CDS
AGAATGCCTGTGATGAGCTT+TGG 0.467508 3_4:-74492051 None:intergenic
CGCAGGAACAACAGAATCTC+CGG 0.469614 3_4:-74491129 None:intergenic
TGCATTGTTATACACTGATC+TGG 0.469741 3_4:-74492244 None:intergenic
TTCAAAGCAAACCTCTGATA+AGG 0.470543 3_4:-74491474 None:intergenic
AGGGAATCAATTCGGGCTGT+TGG 0.471812 3_4:+74487993 Msa0521580:CDS
TCAAGTGAGCTCAGGAAGTC+CGG 0.472287 3_4:+74487591 Msa0521580:CDS
CAATGCTTGGCTAGTCGTGC+TGG 0.472618 3_4:-74491315 None:intergenic
TATTATTACATCTGCAGATA+CGG 0.474405 3_4:-74482817 None:intergenic
CTTCGCCGTCGCAACCGTCC+GGG 0.475178 3_4:+74483076 Msa0521580:CDS
ACTTGGTGGAGTATTTGGTT+GGG 0.475411 3_4:+74483847 Msa0521580:CDS
GTATGCACCATTAAGTTTCA+GGG 0.476554 3_4:-74492112 None:intergenic
TTCTAAGAAAATATCCTCAA+TGG 0.478818 3_4:+74488291 Msa0521580:CDS
GAATTGATTCCCTTGCAATT+GGG 0.478912 3_4:-74487983 None:intergenic
TAGCATAGTTTCCAACATAC+AGG 0.481690 3_4:-74483707 None:intergenic
CTCTTAACTCAAGTGAGCTC+AGG 0.486123 3_4:+74487583 Msa0521580:CDS
GCTTCTGCAGTTTCTGGAGA+TGG 0.486335 3_4:+74488061 Msa0521580:CDS
CATTAAGGAATTTAGTGAAT+GGG 0.486684 3_4:+74486153 Msa0521580:CDS
AAACTATGCTAAGGTTAATC+CGG 0.489948 3_4:+74483719 Msa0521580:CDS
CATCTAATGAATCACGATGT+TGG 0.490830 3_4:-74492312 None:intergenic
GGTTTGAATATATAAAGAAA+TGG 0.490832 3_4:+74492177 Msa0521580:three_prime_UTR
GCTCTGAGTATCAGCAAATA+CGG 0.491058 3_4:-74489824 None:intergenic
TTCACTTCGAGTGGCGAACT+TGG 0.491152 3_4:+74483830 Msa0521580:CDS
TCAATACAGTGCATTGCATC+CGG 0.492293 3_4:+74491902 Msa0521580:CDS
CACCTCAGAGGAAGCAGCTA+GGG 0.493233 3_4:+74485625 Msa0521580:CDS
AAGTCAACTTCCAGTGGCTA+TGG 0.495420 3_4:+74483023 Msa0521580:exon
CTTGCTGGGAGTCGAGCTCC+GGG 0.495428 3_4:+74483549 Msa0521580:CDS
TTTGTCTGTTGTATACCAAA+AGG 0.496811 3_4:+74489885 Msa0521580:CDS
TCTAAGCCACCTGCATCTCT+TGG 0.497035 3_4:+74487630 Msa0521580:CDS
AATATTTCACTGTTATCTGA+TGG 0.500382 3_4:-74486214 None:intergenic
GAGTTACTTACCTATCTCAT+AGG 0.500850 3_4:-74487776 None:intergenic
GTCAATGATGCAATTGCAAG+AGG 0.504606 3_4:-74491842 None:intergenic
GCATTAAGGAATTTAGTGAA+TGG 0.506177 3_4:+74486152 Msa0521580:intron
CCAAAAGCTGTACTGGATCC+TGG 0.506654 3_4:+74491416 Msa0521580:CDS
GCAGCTCTCATATGGATGCT+GGG 0.507243 3_4:+74488380 Msa0521580:CDS
GTTGACTTGCAAACGCTCCT+CGG 0.507820 3_4:-74483008 None:intergenic
AAAGAAATGGAGATAGATAT+GGG 0.512122 3_4:+74492190 Msa0521580:three_prime_UTR
AAGATTGTATTGCTGTTGTA+GGG 0.514619 3_4:+74488318 Msa0521580:CDS
ACTTCGAGTGGCGAACTTGG+TGG 0.516354 3_4:+74483833 Msa0521580:CDS
AATTGCAAGGGAATCAATTC+GGG 0.518278 3_4:+74487986 Msa0521580:CDS
AATGAATCACGATGTTGGAT+TGG 0.521399 3_4:-74492307 None:intergenic
TATGGCTGATGTACATCAGC+AGG 0.521975 3_4:+74486330 Msa0521580:CDS
ATCGTCAAAAGAGCAAGATC+CGG 0.522124 3_4:-74483738 None:intergenic
GGTGCAGGAGCCATAGCCAC+TGG 0.522250 3_4:-74483033 None:intergenic
AGATCAGTGTATAACAATGC+AGG 0.522278 3_4:+74492246 Msa0521580:three_prime_UTR
GTTTGGAGATCTTGTGCTGG+GGG 0.522707 3_4:+74482733 None:intergenic
TGCAAATGGTGCTGTTGTCT+TGG 0.522927 3_4:+74486273 Msa0521580:CDS
GATCATCAATTGCCAATGCT+TGG 0.526886 3_4:-74491328 None:intergenic
AGAACTTGAAATTAGGAGAC+TGG 0.528548 3_4:-74491928 None:intergenic
CCCGAGACTCAGAAAGCACT+GGG 0.529321 3_4:+74489542 Msa0521580:CDS
TCCTTCAACCCTGACCCTAA+AGG 0.529512 3_4:-74483870 None:intergenic
GATAGACTACAGCATGCAAA+TGG 0.530107 3_4:+74486259 Msa0521580:CDS
AGGATAATAATAGTTATGTC+AGG 0.535717 3_4:+74483889 Msa0521580:CDS
CCCCGAGACTCAGAAAGCAC+TGG 0.536714 3_4:+74489541 Msa0521580:CDS
GATCTCACTTTCTTCAAAGA+CGG 0.537593 3_4:+74482975 Msa0521580:five_prime_UTR
TGTTGTTCCTGCGCAGAGAG+TGG 0.538852 3_4:+74491139 Msa0521580:CDS
ATTGCAGGATGTTCATGATA+GGG 0.541499 3_4:+74489723 Msa0521580:intron
AACTCCTTAATGCCAGTCCT+CGG 0.542152 3_4:-74483803 None:intergenic
CAACAATGTCCAAGAACCTA+AGG 0.542710 3_4:+74488352 Msa0521580:CDS
CATTTCTGCTGAAATGTGCC+AGG 0.542817 3_4:-74491434 None:intergenic
CTCTTAGAGTCATCAGTACC+CGG 0.546509 3_4:-74483567 None:intergenic
CCACCTCAGAGGAAGCAGCT+AGG 0.546816 3_4:+74485624 Msa0521580:CDS
GGATCCGATGATCCGAGGAC+TGG 0.547606 3_4:+74483791 Msa0521580:CDS
AAAATGTGTTACCTGTATGT+TGG 0.548280 3_4:+74483696 Msa0521580:CDS
AATGCCAGTCCTCGGATCAT+CGG 0.548429 3_4:-74483795 None:intergenic
GCGGTTGTGAAGCTGCTGAA+GGG 0.548854 3_4:-74491268 None:intergenic
CTGATCTAAAATTACAGCTA+CGG 0.550000 3_4:+74483523 Msa0521580:CDS
CAATCCTTACCTGAGTATCC+TGG 0.550303 3_4:-74484013 None:intergenic
ACCAGACTTTCCAAGACATA+CGG 0.552347 3_4:-74488431 None:intergenic
ACAATGTCTTGTGATGGAAT+TGG 0.555303 3_4:+74486177 Msa0521580:CDS
CCAGTGCTTTCTGAGTCTCG+GGG 0.555690 3_4:-74489541 None:intergenic
GCATCATTAGATATAGAAAA+GGG 0.556114 3_4:-74492491 None:intergenic
ATGTGCCGTAGGAGTGCATT+GGG 0.556487 3_4:-74491869 None:intergenic
GTCGTAGAAAACATGAGTCT+GGG 0.557014 3_4:+74492342 Msa0521580:three_prime_UTR
CTGAAAACTCAAATGTCCCT+CGG 0.557020 3_4:-74491073 None:intergenic
CACGCATTACCAAGAGATGC+AGG 0.558649 3_4:-74487639 None:intergenic
TTTGCCTCCACTCTCTGCGC+AGG 0.558741 3_4:-74491146 None:intergenic
CGGGTACTGATGACTCTAAG+AGG 0.560686 3_4:+74483568 Msa0521580:CDS
GAGTTTGTGTTCACTTCGAG+TGG 0.560907 3_4:+74483821 Msa0521580:CDS
GCATTTGATGCTCAATGACC+AGG 0.563623 3_4:+74483995 Msa0521580:CDS
CCATAGATAAAGTCAAGTGC+AGG 0.564762 3_4:-74486312 None:intergenic
TTTCTATATCTAATGATGCA+AGG 0.566737 3_4:+74492495 Msa0521580:three_prime_UTR
GAAAAGATTACCGATTCAGA+AGG 0.567189 3_4:-74485685 None:intergenic
TTGGCAATTGATGATCTGCT+TGG 0.567360 3_4:+74491335 Msa0521580:CDS
AGCTCACTTGAGTTAAGAGA+GGG 0.567475 3_4:-74487579 None:intergenic
AGTTTGGAGATCTTGTGCTG+GGG 0.570704 3_4:+74482732 None:intergenic
TGTCCAAGAACCTAAGGCTA+AGG 0.572102 3_4:+74488358 Msa0521580:CDS
GCTCAATGACCAGGATACTC+AGG 0.572468 3_4:+74484004 Msa0521580:CDS
CGGTTGTGAAGCTGCTGAAG+GGG 0.573044 3_4:-74491267 None:intergenic
CATGTGCCGTAGGAGTGCAT+TGG 0.574006 3_4:-74491870 None:intergenic
AGCGGTTGTGAAGCTGCTGA+AGG 0.575249 3_4:-74491269 None:intergenic
GCATGATGCTCCGTATGTCT+TGG 0.576281 3_4:+74488421 Msa0521580:CDS
GATCAGTGTATAACAATGCA+GGG 0.576540 3_4:+74492247 Msa0521580:three_prime_UTR
TTTGGGTTGAGGGTCAACGG+GGG 0.576858 3_4:-74491398 None:intergenic
CTCCCTAGCTGCTTCCTCTG+AGG 0.578498 3_4:-74485627 None:intergenic
TTATCAGTGAACATGTAAGA+AGG 0.579603 3_4:-74491044 None:intergenic
CAGCTCTCATATGGATGCTG+GGG 0.579778 3_4:+74488381 Msa0521580:CDS
GTTATCTGATGGAATGTACT+TGG 0.582108 3_4:-74486203 None:intergenic
ATGTTGACATCCCAATTGCA+AGG 0.584452 3_4:+74487973 Msa0521580:CDS
CCTAGCTGCTTCCTCTGAGG+TGG 0.585891 3_4:-74485624 None:intergenic
TGAGATCTAACCAACAAGGA+TGG 0.586243 3_4:-74482959 None:intergenic
ATGTCAATGCTATTGTTGAT+CGG 0.587080 3_4:+74488039 Msa0521580:CDS
TGATGACCAAAGCTCATCAC+AGG 0.588639 3_4:+74492045 Msa0521580:CDS
GTATGTTGGAAACTATGCTA+AGG 0.594327 3_4:+74483710 Msa0521580:CDS
ACGGACCCGGACGGTTGCGA+CGG 0.594447 3_4:-74483081 None:intergenic
TAAGAGGGATCTTTACAAGA+AGG 0.601150 3_4:+74483584 Msa0521580:CDS
ATGTCTTGTGATGGAATTGG+TGG 0.601765 3_4:+74486180 Msa0521580:CDS
CAGCACGACTAGCCAAGCAT+TGG 0.603702 3_4:+74491316 Msa0521580:CDS
TTTCTTTATATATTCAAACC+AGG 0.605607 3_4:-74492174 None:intergenic
CCGGACGGTTGCGACGGCGA+AGG 0.610990 3_4:-74483075 None:intergenic
GAAATTAGGAGACTGGCCGC+CGG 0.615981 3_4:-74491921 None:intergenic
CGACGTAGTAGAAGCTGACG+TGG 0.618811 3_4:-74482791 None:intergenic
TCTGGGTTGCAAGTGTGTAG+AGG 0.619217 3_4:+74492359 Msa0521580:three_prime_UTR
ATGGGCACAATGTCTTGTGA+TGG 0.620096 3_4:+74486171 Msa0521580:CDS
ACTACCAATATCCTTATCAG+AGG 0.623846 3_4:+74491463 Msa0521580:CDS
CAGTGCTTTCTGAGTCTCGG+GGG 0.624458 3_4:-74489540 None:intergenic
AATGACTTTGCATGTGCCGT+AGG 0.625693 3_4:-74491880 None:intergenic
TGTTGACATCCCAATTGCAA+GGG 0.626270 3_4:+74487974 Msa0521580:CDS
TTTGGAGATCTTGTGCTGGG+GGG 0.626458 3_4:+74482734 None:intergenic
CGACTCCCAATGCACTCCTA+CGG 0.627621 3_4:+74491864 Msa0521580:CDS
GTGAGAGATACTGGAAGCAA+TGG 0.629878 3_4:+74491209 Msa0521580:CDS
GAGCTCACTTGAGTTAAGAG+AGG 0.630893 3_4:-74487580 None:intergenic
GAAAATGCCAAATCTGCAAG+CGG 0.631748 3_4:-74491287 None:intergenic
CGCCGCGATTAAATTTGGTG+CGG 0.631903 3_4:+74492443 Msa0521580:three_prime_UTR
GCTTCTACAACACAATGTAT+CGG 0.632864 3_4:+74489762 Msa0521580:CDS
GGGTACTGATGACTCTAAGA+GGG 0.633805 3_4:+74483569 Msa0521580:CDS
GAGAGTGGAGGCAAATGACA+AGG 0.634383 3_4:+74491154 Msa0521580:CDS
ATCTGCATCAATACACGTGG+AGG 0.639042 3_4:-74483955 None:intergenic
GGGGCAGACCCATTATAGGA+AGG 0.639597 3_4:-74491248 None:intergenic
AAGACGGCGCGAATTTCCCG+AGG 0.640158 3_4:+74482991 Msa0521580:five_prime_UTR
ATACAATCTTGACTCCATTG+AGG 0.643764 3_4:-74488305 None:intergenic
ATAGAAGTGTTTGTAGTCCG+AGG 0.645673 3_4:-74487677 None:intergenic
ATCAGTGTATAACAATGCAG+GGG 0.646791 3_4:+74492248 Msa0521580:three_prime_UTR
TTCCGCACCAAATTTAATCG+CGG 0.646800 3_4:-74492445 None:intergenic
TGTTCCTGCGCAGAGAGTGG+AGG 0.648267 3_4:+74491142 Msa0521580:CDS
GATCAGGATCCGATGATCCG+AGG 0.649993 3_4:+74483786 Msa0521580:CDS
TCAATGATGCAATTGCAAGA+GGG 0.655935 3_4:-74491841 None:intergenic
GGAGATCGATTAGATTGCGG+TGG 0.656896 3_4:-74483054 None:intergenic
AGTGAGGGAACGGACCCGGA+CGG 0.658380 3_4:-74483090 None:intergenic
GTGAAAATCAGCAAGACCAG+CGG 0.660650 3_4:-74489576 None:intergenic
TAATAATAGTTATGTCAGGA+CGG 0.660766 3_4:+74483893 Msa0521580:CDS
TGTATCGGTGGCTGAGAGTG+TGG 0.662667 3_4:+74489777 Msa0521580:CDS
TGGCAATCTGTCTATTAGTG+CGG 0.662854 3_4:+74491103 Msa0521580:CDS
GTTTGCAAGTCAACTTCCAG+TGG 0.667172 3_4:+74483017 Msa0521580:five_prime_UTR
TCTACAACACAATGTATCGG+TGG 0.672727 3_4:+74489765 Msa0521580:CDS
AGTGCTTTCTGAGTCTCGGG+GGG 0.673467 3_4:-74489539 None:intergenic
TCTGGTTGAAAATTGGGACG+AGG 0.674693 3_4:+74488448 Msa0521580:CDS
ATACAGTGCATTGCATCCGG+CGG 0.681832 3_4:+74491905 Msa0521580:CDS
AAAATCTGCATCAATACACG+TGG 0.682353 3_4:-74483958 None:intergenic
GGACGAGGAGCATTCTGCCG+AGG 0.683462 3_4:+74488463 Msa0521580:CDS
CTTAGAGTCAACCACCTCAG+AGG 0.685984 3_4:+74485613 Msa0521580:CDS
GAAGGAGATCGATTAGATTG+CGG 0.687354 3_4:-74483057 None:intergenic
CTAATGATGCAAGGTGCCTG+CGG 0.693479 3_4:+74492504 Msa0521580:three_prime_UTR
TCAGTGTATAACAATGCAGG+GGG 0.695855 3_4:+74492249 Msa0521580:three_prime_UTR
AGCTCTCATATGGATGCTGG+GGG 0.703952 3_4:+74488382 Msa0521580:CDS
AAAGTGAGATCTAACCAACA+AGG 0.705125 3_4:-74482963 None:intergenic
GGATCTGCTTCTAAGTACCA+CGG 0.710539 3_4:+74491175 Msa0521580:CDS
TAATAGTTATGTCAGGACGG+TGG 0.728993 3_4:+74483896 Msa0521580:CDS
GCATTACCAAGAGATGCAGG+TGG 0.740701 3_4:-74487636 None:intergenic
TCACTGATAAGGAACACCGA+GGG 0.741366 3_4:+74491057 Msa0521580:CDS
GCTCACTTGAGTTAAGAGAG+GGG 0.755910 3_4:-74487578 None:intergenic
TTCACTGATAAGGAACACCG+AGG 0.759479 3_4:+74491056 Msa0521580:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTGTATCTTTTTTTTA+CGG - chr3_4:74485245-74485264 None:intergenic 10.0%
!!! TATGACAATATTTTATATTT+AGG + chr3_4:74490201-74490220 Msa0521580:intron 10.0%
!!! TTACATTATTTATAGTTTTT+CGG + chr3_4:74490330-74490349 Msa0521580:intron 10.0%
!! AAAAATATCTAATTTGAAAA+TGG - chr3_4:74490434-74490453 None:intergenic 10.0%
!! TAAAAATGAATGTAAATTGA+GGG + chr3_4:74484199-74484218 Msa0521580:intron 15.0%
!!! TTTTTTTCCTTAACATTATT+TGG + chr3_4:74485076-74485095 Msa0521580:intron 15.0%
!!! ATATTGTATCTTTTTTTTAC+GGG - chr3_4:74485244-74485263 None:intergenic 15.0%
!!! GTGCAAAATAATTTTAAAAT+GGG - chr3_4:74485811-74485830 None:intergenic 15.0%
!! AATTATAAATCAGTTATTCT+AGG + chr3_4:74485916-74485935 Msa0521580:intron 15.0%
!! ATAAACAAAATAAGCAATTA+AGG - chr3_4:74486012-74486031 None:intergenic 15.0%
!!! TTATTGATAACTTTTTCATT+TGG + chr3_4:74486906-74486925 Msa0521580:intron 15.0%
!!! TTAATTCTTGTTTTTGTTTA+TGG + chr3_4:74486945-74486964 Msa0521580:intron 15.0%
!!! AATTTTAATGTATAAGTGTA+TGG - chr3_4:74487253-74487272 None:intergenic 15.0%
!! TATATCATATGTGAATATTA+GGG + chr3_4:74487308-74487327 Msa0521580:intron 15.0%
!! ATTCATATGATTTCAATTAA+CGG - chr3_4:74488596-74488615 None:intergenic 15.0%
!! ACAAAACAAAACAAAAAAAT+TGG - chr3_4:74490098-74490117 None:intergenic 15.0%
!!! TGAACCTTTTTATTTATTTT+TGG + chr3_4:74490710-74490729 Msa0521580:intron 15.0%
!! TTCACCAAAAATAAATAAAA+AGG - chr3_4:74490717-74490736 None:intergenic 15.0%
!!! AATAATTATTTAGAATGTCA+AGG - chr3_4:74490775-74490794 None:intergenic 15.0%
!! AAATATCAATAATAAAAGCA+AGG - chr3_4:74490928-74490947 None:intergenic 15.0%
!! TAAATTTAATAATATGATGC+AGG + chr3_4:74491805-74491824 Msa0521580:intron 15.0%
!! TATGATCTACAAATTCAATT+TGG + chr3_4:74483143-74483162 Msa0521580:intron 20.0%
!! GATAATTGTGATATCAATAA+TGG - chr3_4:74483405-74483424 None:intergenic 20.0%
!! ACAATTATCTTATGTTAATG+TGG + chr3_4:74483416-74483435 Msa0521580:intron 20.0%
!! GTCTAATGATTTATGTAAAT+CGG + chr3_4:74484140-74484159 Msa0521580:intron 20.0%
!! GTAAAAATGAATGTAAATTG+AGG + chr3_4:74484198-74484217 Msa0521580:intron 20.0%
!! ATTTGTAAAAAAGTTAGTAC+TGG + chr3_4:74484422-74484441 Msa0521580:intron 20.0%
!!! AAAGAGATAATATTTTATGC+TGG + chr3_4:74484503-74484522 Msa0521580:intron 20.0%
!!! ATTTTATGCTGGAAAATAAA+AGG + chr3_4:74484514-74484533 Msa0521580:intron 20.0%
!!! TTTTATGCTGGAAAATAAAA+GGG + chr3_4:74484515-74484534 Msa0521580:intron 20.0%
!! AATGTATAGTTAACGTAAAT+CGG + chr3_4:74484799-74484818 Msa0521580:intron 20.0%
!!! TGGATATTACATTTATGTTT+TGG + chr3_4:74484868-74484887 Msa0521580:intron 20.0%
!! TTGTACTCTATACTATAAAT+TGG + chr3_4:74485040-74485059 Msa0521580:intron 20.0%
!!! AAAAGGAACATTCATTTTTA+AGG - chr3_4:74485418-74485437 None:intergenic 20.0%
!!! GGTGCAAAATAATTTTAAAA+TGG - chr3_4:74485812-74485831 None:intergenic 20.0%
!!! CTAATTTTTCAACAACTTAT+TGG + chr3_4:74486107-74486126 Msa0521580:intron 20.0%
!! ATTTATCAATACAGAATCTA+CGG - chr3_4:74486807-74486826 None:intergenic 20.0%
!! AAGAATTAAAAACACAGAAA+TGG - chr3_4:74486934-74486953 None:intergenic 20.0%
!! GTATATCATATGTGAATATT+AGG + chr3_4:74487307-74487326 Msa0521580:intron 20.0%
!! TATTTAACCATATTTGCATA+AGG + chr3_4:74487391-74487410 Msa0521580:intron 20.0%
!! ATGAACATGATAGTTTAAAT+AGG - chr3_4:74487438-74487457 None:intergenic 20.0%
!!! ATGCAACTTATTTTTGTTTA+AGG + chr3_4:74487537-74487556 Msa0521580:intron 20.0%
!!! GATTTAAATTTCTGCATTTT+AGG + chr3_4:74488538-74488557 Msa0521580:intron 20.0%
!!! AATTAACGGCTTAAATTTTT+GGG - chr3_4:74488582-74488601 None:intergenic 20.0%
!! GTTAATTGAAATCATATGAA+TGG + chr3_4:74488595-74488614 Msa0521580:intron 20.0%
!!! TTTTATATTATACCTCTAAC+CGG + chr3_4:74488618-74488637 Msa0521580:intron 20.0%
!!! TATGATTTTGAAATTTGAAG+AGG + chr3_4:74488904-74488923 Msa0521580:intron 20.0%
!!! ATGATTTTGAAATTTGAAGA+GGG + chr3_4:74488905-74488924 Msa0521580:intron 20.0%
!! TTATTCTTCTACAACATTAA+AGG + chr3_4:74490268-74490287 Msa0521580:intron 20.0%
!!! ATTATTTATAGTTTTTCGGT+AGG + chr3_4:74490334-74490353 Msa0521580:intron 20.0%
!!! TTTTTTTGTAATCAAACAGA+TGG + chr3_4:74490382-74490401 Msa0521580:intron 20.0%
!! CTTCATGTAAATTGATATAA+CGG + chr3_4:74490594-74490613 Msa0521580:intron 20.0%
!! AGAATATAATATAGAAGAGA+GGG - chr3_4:74490995-74491014 None:intergenic 20.0%
!! ATAATATGACAACACATTAA+TGG + chr3_4:74491625-74491644 Msa0521580:intron 20.0%
!! TGCAATTTAAAAAATCTCTA+GGG - chr3_4:74491701-74491720 None:intergenic 20.0%
!! AAGAAAAAGAACTTGAAATT+AGG - chr3_4:74491938-74491957 None:intergenic 20.0%
!! TTTCTTTATATATTCAAACC+AGG - chr3_4:74492177-74492196 None:intergenic 20.0%
!! GGTTTGAATATATAAAGAAA+TGG + chr3_4:74492177-74492196 Msa0521580:three_prime_UTR 20.0%
! TATTATTACATCTGCAGATA+CGG - chr3_4:74482820-74482839 None:intergenic 25.0%
!!! CTCACTTTTTTCATCAAAAA+TGG - chr3_4:74482884-74482903 None:intergenic 25.0%
! TCGTGAAAGTTAAAATTCAA+CGG - chr3_4:74483322-74483341 None:intergenic 25.0%
! ATTATCTTATGTTAATGTGG+TGG + chr3_4:74483419-74483438 Msa0521580:intron 25.0%
! CCTGGTTAAAATTAAATGTT+AGG - chr3_4:74483490-74483509 None:intergenic 25.0%
!!! CCTAACATTTAATTTTAACC+AGG + chr3_4:74483487-74483506 Msa0521580:intron 25.0%
!! TGACGATTAATTTTCTTCAA+AGG + chr3_4:74483754-74483773 Msa0521580:CDS 25.0%
!! GACGATTAATTTTCTTCAAA+GGG + chr3_4:74483755-74483774 Msa0521580:CDS 25.0%
! AGGATAATAATAGTTATGTC+AGG + chr3_4:74483889-74483908 Msa0521580:CDS 25.0%
! TAATAATAGTTATGTCAGGA+CGG + chr3_4:74483893-74483912 Msa0521580:CDS 25.0%
! TTTATCATATGCTGATGATT+AGG - chr3_4:74484053-74484072 None:intergenic 25.0%
!!! TTTTTTACTGGAAAGAGAAA+AGG + chr3_4:74484176-74484195 Msa0521580:intron 25.0%
!!! TAGGAGCTATTACATTTTTT+TGG + chr3_4:74484233-74484252 Msa0521580:intron 25.0%
!!! AGGAGCTATTACATTTTTTT+GGG + chr3_4:74484234-74484253 Msa0521580:intron 25.0%
!!! AAAAGGGTATTTTGATATTC+TGG + chr3_4:74484531-74484550 Msa0521580:intron 25.0%
!!! TTTGATTTGCTAAAAAACAG+GGG - chr3_4:74484709-74484728 None:intergenic 25.0%
!!! GTTTGATTTGCTAAAAAACA+GGG - chr3_4:74484710-74484729 None:intergenic 25.0%
!!! TTCACAAAGTTGATGATTAA+GGG - chr3_4:74484736-74484755 None:intergenic 25.0%
! GATTTACGTTAACTATACAT+TGG - chr3_4:74484800-74484819 None:intergenic 25.0%
! GATCATACTATAACATAAAC+TGG - chr3_4:74484963-74484982 None:intergenic 25.0%
! TAGTATAGAGTACAAATAGA+TGG - chr3_4:74485035-74485054 None:intergenic 25.0%
!!! ATATTGCTACTTTAGGATTA+AGG - chr3_4:74485216-74485235 None:intergenic 25.0%
!!! CATTTTTAAGGAACCTAAAA+AGG - chr3_4:74485406-74485425 None:intergenic 25.0%
! GCAATAGAAAGAACAAAAAA+AGG - chr3_4:74485435-74485454 None:intergenic 25.0%
!! TTGTTGTTCACATATATATC+AGG + chr3_4:74485462-74485481 Msa0521580:intron 25.0%
! TTCAGAAGGTAATAAACAAT+TGG - chr3_4:74485674-74485693 None:intergenic 25.0%
! TTGTTTATTACCTTCTGAAT+CGG + chr3_4:74485675-74485694 Msa0521580:CDS 25.0%
! TGTCAAAATGAGAAATAGAA+CGG - chr3_4:74485833-74485852 None:intergenic 25.0%
! CTGATTTATAATTGTATGCA+AGG - chr3_4:74485909-74485928 None:intergenic 25.0%
! TATTCTAGGTAATATGATTG+TGG + chr3_4:74485930-74485949 Msa0521580:intron 25.0%
! ATTCTAGGTAATATGATTGT+GGG + chr3_4:74485931-74485950 Msa0521580:intron 25.0%
! ATAAAATGTCTTTCTCATTG+TGG + chr3_4:74486040-74486059 Msa0521580:intron 25.0%
! CATTAAGGAATTTAGTGAAT+GGG + chr3_4:74486153-74486172 Msa0521580:CDS 25.0%
! AATATTTCACTGTTATCTGA+TGG - chr3_4:74486217-74486236 None:intergenic 25.0%
! ACTATGTTGTAAAGAAAAAC+AGG - chr3_4:74486400-74486419 None:intergenic 25.0%
! AACTGAAAAGTAAAGTTGTA+TGG - chr3_4:74486441-74486460 None:intergenic 25.0%
! CTACTAAAAGTAAAGTCATA+TGG - chr3_4:74486474-74486493 None:intergenic 25.0%
! CTGGTTTAGTATATTTAACT+AGG + chr3_4:74486850-74486869 Msa0521580:intron 25.0%
! GTATATTTAACTAGGATGAT+TGG + chr3_4:74486858-74486877 Msa0521580:intron 25.0%
! TAAACACTTGTATAAGTGTA+TGG - chr3_4:74487197-74487216 None:intergenic 25.0%
! ATTAAACTGTTTAACAAACG+AGG + chr3_4:74487331-74487350 Msa0521580:intron 25.0%
! TTAAACTGTTTAACAAACGA+GGG + chr3_4:74487332-74487351 Msa0521580:intron 25.0%
!! TTCAACTTTTTGACATATGA+TGG - chr3_4:74487718-74487737 None:intergenic 25.0%
! CATCAAATTGAAAAATGCAA+TGG - chr3_4:74487851-74487870 None:intergenic 25.0%
!! TGATTAATTCCCTTTCTTTT+TGG + chr3_4:74487886-74487905 Msa0521580:intron 25.0%
! TAAGCATTACCAAAAAGAAA+GGG - chr3_4:74487898-74487917 None:intergenic 25.0%
! ATAAGCATTACCAAAAAGAA+AGG - chr3_4:74487899-74487918 None:intergenic 25.0%
!! TTCTAAGAAAATATCCTCAA+TGG + chr3_4:74488291-74488310 Msa0521580:CDS 25.0%
! AAAAGTTATGTATACTACCT+CGG - chr3_4:74488483-74488502 None:intergenic 25.0%
! AAATTTAAATCGCAAATGTG+TGG - chr3_4:74488529-74488548 None:intergenic 25.0%
!! CAATTAACGGCTTAAATTTT+TGG - chr3_4:74488583-74488602 None:intergenic 25.0%
! TTGTCTTGTAAACTGAATTA+TGG - chr3_4:74488754-74488773 None:intergenic 25.0%
!! TGTTTTACAAGAATTTTGCT+AGG - chr3_4:74488847-74488866 None:intergenic 25.0%
! GTATGCATATTCTCTATTAT+AGG - chr3_4:74489349-74489368 None:intergenic 25.0%
! TAGAAGCCTGTAATAAAATA+AGG - chr3_4:74489749-74489768 None:intergenic 25.0%
!! TCAGTAAATTAGTTACCTTT+TGG - chr3_4:74489903-74489922 None:intergenic 25.0%
!! TTTTAAACTTGAAGCCATTT+CGG + chr3_4:74489947-74489966 Msa0521580:intron 25.0%
! TTAGTGCTTCATAGATAAAA+CGG - chr3_4:74489998-74490017 None:intergenic 25.0%
! ATGAGGGAAAATATGATAAA+CGG + chr3_4:74490621-74490640 Msa0521580:intron 25.0%
! TTAGAATGTCAAGGTTATTA+CGG - chr3_4:74490766-74490785 None:intergenic 25.0%
! CAGAATATAATATAGAAGAG+AGG - chr3_4:74490996-74491015 None:intergenic 25.0%
!!! TTGGTTTAGATTTTTCAGTT+GGG + chr3_4:74491354-74491373 Msa0521580:CDS 25.0%
! TGACTTGAATCAAAATCATT+AGG - chr3_4:74491579-74491598 None:intergenic 25.0%
! GTGCAATTTAAAAAATCTCT+AGG - chr3_4:74491702-74491721 None:intergenic 25.0%
!!! CTTTATTTTAATCTGTGACT+TGG - chr3_4:74492023-74492042 None:intergenic 25.0%
! CAAGTCACAGATTAAAATAA+AGG + chr3_4:74492021-74492040 Msa0521580:CDS 25.0%
!! AGTCGACAATAATGAAATTT+TGG + chr3_4:74492148-74492167 Msa0521580:three_prime_UTR 25.0%
!!! ATAATGAAATTTTGGAATCC+TGG + chr3_4:74492156-74492175 Msa0521580:three_prime_UTR 25.0%
! TAAAGAAATGGAGATAGATA+TGG + chr3_4:74492189-74492208 Msa0521580:three_prime_UTR 25.0%
! AAAGAAATGGAGATAGATAT+GGG + chr3_4:74492190-74492209 Msa0521580:three_prime_UTR 25.0%
! ATTGATGTTGAAATGTGATT+TGG + chr3_4:74492467-74492486 Msa0521580:three_prime_UTR 25.0%
! GCATCATTAGATATAGAAAA+GGG - chr3_4:74492494-74492513 None:intergenic 25.0%
! TGCATCATTAGATATAGAAA+AGG - chr3_4:74492495-74492514 None:intergenic 25.0%
! TTTCTATATCTAATGATGCA+AGG + chr3_4:74492495-74492514 Msa0521580:three_prime_UTR 25.0%
CATTCATATACGCAAATTCT+AGG + chr3_4:74483270-74483289 Msa0521580:intron 30.0%
AAGTTAAAATTCAACGGCAT+TGG - chr3_4:74483316-74483335 None:intergenic 30.0%
! CTGATCTAAAATTACAGCTA+CGG + chr3_4:74483523-74483542 Msa0521580:CDS 30.0%
GTGATATCAAACATGACTAT+AGG + chr3_4:74483606-74483625 Msa0521580:CDS 30.0%
AAAATGTGTTACCTGTATGT+TGG + chr3_4:74483696-74483715 Msa0521580:CDS 30.0%
AAACTATGCTAAGGTTAATC+CGG + chr3_4:74483719-74483738 Msa0521580:CDS 30.0%
! TTTTCTTCAAAGGGATTGTA+AGG + chr3_4:74483764-74483783 Msa0521580:CDS 30.0%
! TTAGACTATGTAGATTAGCT+TGG - chr3_4:74484126-74484145 None:intergenic 30.0%
AAATGAATGTAAATTGAGGG+AGG + chr3_4:74484202-74484221 Msa0521580:intron 30.0%
TAGAAGTTACTTCCTTAGTT+GGG + chr3_4:74484271-74484290 Msa0521580:intron 30.0%
AGTACAAGACAAAATAGTAC+AGG + chr3_4:74484452-74484471 Msa0521580:intron 30.0%
! TTTGATTTAGAACAGGTCAT+GGG - chr3_4:74484654-74484673 None:intergenic 30.0%
!! CGTTTGATTTGCTAAAAAAC+AGG - chr3_4:74484711-74484730 None:intergenic 30.0%
!! CTTCACAAAGTTGATGATTA+AGG - chr3_4:74484737-74484756 None:intergenic 30.0%
AAAGGGTAAAAGTAATGTAG+TGG + chr3_4:74484848-74484867 Msa0521580:intron 30.0%
GGATCTATTCTATAAGTGAT+GGG - chr3_4:74485014-74485033 None:intergenic 30.0%
TGGATCTATTCTATAAGTGA+TGG - chr3_4:74485015-74485034 None:intergenic 30.0%
TGCTCATCCAAATAATGTTA+AGG - chr3_4:74485086-74485105 None:intergenic 30.0%
TTGTAAGCAATGCTATTATC+AGG + chr3_4:74485124-74485143 Msa0521580:intron 30.0%
!! GGCTTTAATATTGCTACTTT+AGG - chr3_4:74485223-74485242 None:intergenic 30.0%
! ACCATATCCTTTACCTTTTT+AGG + chr3_4:74485390-74485409 Msa0521580:intron 30.0%
ACCTAAAAAGGTAAAGGATA+TGG - chr3_4:74485394-74485413 None:intergenic 30.0%
TAAGGAACCTAAAAAGGTAA+AGG - chr3_4:74485400-74485419 None:intergenic 30.0%
! ATGATCTTGTTTGTTTCATC+AGG + chr3_4:74485550-74485569 Msa0521580:intron 30.0%
TGTCTGCTTTACAAGAAATT+TGG + chr3_4:74485588-74485607 Msa0521580:CDS 30.0%
TAAAGGAGTTCAATGGATAT+CGG - chr3_4:74485719-74485738 None:intergenic 30.0%
!!! TAATTTTAAAATGGGAACCC+CGG - chr3_4:74485803-74485822 None:intergenic 30.0%
!! AATATGATTGTGGGAGTATT+TGG + chr3_4:74485940-74485959 Msa0521580:intron 30.0%
GCATTAAGGAATTTAGTGAA+TGG + chr3_4:74486152-74486171 Msa0521580:intron 30.0%
TTTGTCATTAAGGTTCTGTA+AGG + chr3_4:74486523-74486542 Msa0521580:intron 30.0%
! GCTAAATTAGTTTCAACCAA+AGG - chr3_4:74486639-74486658 None:intergenic 30.0%
! TAATTTAGCTCAGTTCCTTA+AGG + chr3_4:74486650-74486669 Msa0521580:intron 30.0%
TACTTGCAAATCTAAGTCTA+AGG - chr3_4:74486733-74486752 None:intergenic 30.0%
TTGTTTACTTACCATAGAAG+AGG + chr3_4:74487048-74487067 Msa0521580:intron 30.0%
TAAACTGTTTAACAAACGAG+GGG + chr3_4:74487333-74487352 Msa0521580:intron 30.0%
! TGACTGTATCTTTTCATCTT+TGG + chr3_4:74487486-74487505 Msa0521580:intron 30.0%
AGAATTGCATAAGATTGTTC+CGG - chr3_4:74487613-74487632 None:intergenic 30.0%
! TGCACCATATATATTTTCCT+CGG + chr3_4:74487660-74487679 Msa0521580:CDS 30.0%
TAGTCCGAGGAAAATATATA+TGG - chr3_4:74487667-74487686 None:intergenic 30.0%
!! CAATTTGATGTTTTGTTCAC+CGG + chr3_4:74487861-74487880 Msa0521580:intron 30.0%
AGAAAGGGAATTAATCAAAC+CGG - chr3_4:74487883-74487902 None:intergenic 30.0%
ATGTCAATGCTATTGTTGAT+CGG + chr3_4:74488039-74488058 Msa0521580:CDS 30.0%
GTTCGTATATTAACATGAAG+CGG - chr3_4:74488175-74488194 None:intergenic 30.0%
!!! ATATTGTTTTGACCTGGTAA+TGG + chr3_4:74488213-74488232 Msa0521580:intron 30.0%
CATAAAATGAACTTTCGAAC+TGG - chr3_4:74488252-74488271 None:intergenic 30.0%
! TTCGAAAGTTCATTTTATGC+AGG + chr3_4:74488253-74488272 Msa0521580:intron 30.0%
! AAGATTGTATTGCTGTTGTA+GGG + chr3_4:74488318-74488337 Msa0521580:CDS 30.0%
!!! GCTTAAATTTTTGGGATAGT+TGG - chr3_4:74488574-74488593 None:intergenic 30.0%
TCAGTTTACAAGACAAGATA+AGG + chr3_4:74488758-74488777 Msa0521580:intron 30.0%
! GCGATGTTCTAAATAGTTAT+CGG - chr3_4:74488798-74488817 None:intergenic 30.0%
ATTGCGTCTTATATTACAGA+GGG - chr3_4:74489013-74489032 None:intergenic 30.0%
AATTGCGTCTTATATTACAG+AGG - chr3_4:74489014-74489033 None:intergenic 30.0%
TGTAATATAAGACGCAATTG+TGG + chr3_4:74489015-74489034 Msa0521580:intron 30.0%
GAACTTAACACCTAATATCA+AGG - chr3_4:74489047-74489066 None:intergenic 30.0%
ATATTAGGTGTTAAGTTCCA+CGG + chr3_4:74489049-74489068 Msa0521580:intron 30.0%
AGTAAATAACAACTCAAACC+TGG - chr3_4:74489601-74489620 None:intergenic 30.0%
ACAATGCGATTAGATATTTG+TGG + chr3_4:74489643-74489662 Msa0521580:intron 30.0%
!!! ATAGGGCCTTATTTTATTAC+AGG + chr3_4:74489740-74489759 Msa0521580:CDS 30.0%
TTTGTCTGTTGTATACCAAA+AGG + chr3_4:74489885-74489904 Msa0521580:CDS 30.0%
TTTAAACTTGAAGCCATTTC+GGG + chr3_4:74489948-74489967 Msa0521580:intron 30.0%
!!! TGTTTTGATTCAACACACTT+TGG + chr3_4:74490115-74490134 Msa0521580:intron 30.0%
TCTCAGACATATGGTAATAA+TGG + chr3_4:74490143-74490162 Msa0521580:intron 30.0%
TTAAAGGATGATGATCAATG+AGG + chr3_4:74490284-74490303 Msa0521580:intron 30.0%
!! TATAGTTTTTCGGTAGGAAT+TGG + chr3_4:74490340-74490359 Msa0521580:intron 30.0%
ATGTGTTTGTGTGTATGTAT+CGG + chr3_4:74490518-74490537 Msa0521580:intron 30.0%
ATTGATATAACGGCAAAATG+AGG + chr3_4:74490604-74490623 Msa0521580:intron 30.0%
TTGATATAACGGCAAAATGA+GGG + chr3_4:74490605-74490624 Msa0521580:intron 30.0%
TGAGGGAAAATATGATAAAC+GGG + chr3_4:74490622-74490641 Msa0521580:intron 30.0%
!! AAGTCAAGGTTATTTTACAG+GGG - chr3_4:74490675-74490694 None:intergenic 30.0%
!! GAAGTCAAGGTTATTTTACA+GGG - chr3_4:74490676-74490695 None:intergenic 30.0%
!! AGAAGTCAAGGTTATTTTAC+AGG - chr3_4:74490677-74490696 None:intergenic 30.0%
ATAATATAGAAGAGAGGGAA+GGG - chr3_4:74490990-74491009 None:intergenic 30.0%
TATAATATAGAAGAGAGGGA+AGG - chr3_4:74490991-74491010 None:intergenic 30.0%
TTATCAGTGAACATGTAAGA+AGG - chr3_4:74491047-74491066 None:intergenic 30.0%
TTCTTACATGTTCACTGATA+AGG + chr3_4:74491046-74491065 Msa0521580:CDS 30.0%
!! TTTGAGTTTTCAGATGAACT+TGG + chr3_4:74491083-74491102 Msa0521580:CDS 30.0%
!! ATTATAGGAAGGAGCATTAT+AGG - chr3_4:74491240-74491259 None:intergenic 30.0%
TATAATGCTCCTTCCTATAA+TGG + chr3_4:74491239-74491258 Msa0521580:CDS 30.0%
ATAATGCTCCTTCCTATAAT+GGG + chr3_4:74491240-74491259 Msa0521580:CDS 30.0%
!! CTTGGTTTAGATTTTTCAGT+TGG + chr3_4:74491353-74491372 Msa0521580:CDS 30.0%
ATCAAAATCATTAGGTGATG+TGG - chr3_4:74491571-74491590 None:intergenic 30.0%
!! GATCAATTTTGATGCATTGT+TGG - chr3_4:74491679-74491698 None:intergenic 30.0%
!!! CCAATATACTGGACATTTTT+TGG - chr3_4:74491763-74491782 None:intergenic 30.0%
CCAAAAAATGTCCAGTATAT+TGG + chr3_4:74491760-74491779 Msa0521580:intron 30.0%
!!! TATTTTAATCTGTGACTTGG+CGG - chr3_4:74492020-74492039 None:intergenic 30.0%
AAAGTGAGATCTAACCAACA+AGG - chr3_4:74482966-74482985 None:intergenic 35.0%
GATCTCACTTTCTTCAAAGA+CGG + chr3_4:74482975-74482994 Msa0521580:five_prime_UTR 35.0%
TAAGATGAAGAGATGAGTGA+GGG - chr3_4:74483108-74483127 None:intergenic 35.0%
! GTTTGCTAAGATCCAAAAAG+CGG - chr3_4:74483201-74483220 None:intergenic 35.0%
TAAGAGGGATCTTTACAAGA+AGG + chr3_4:74483584-74483603 Msa0521580:CDS 35.0%
ATTGATGTTTCGTCTCTCTT+TGG + chr3_4:74483630-74483649 Msa0521580:CDS 35.0%
TAGCATAGTTTCCAACATAC+AGG - chr3_4:74483710-74483729 None:intergenic 35.0%
GTATGTTGGAAACTATGCTA+AGG + chr3_4:74483710-74483729 Msa0521580:CDS 35.0%
AAAATCTGCATCAATACACG+TGG - chr3_4:74483961-74483980 None:intergenic 35.0%
ATCAAATGCTTCAACGTTTC+TGG - chr3_4:74483984-74484003 None:intergenic 35.0%
! AGGTAAGGATTGTGCTTTTA+TGG + chr3_4:74484024-74484043 Msa0521580:intron 35.0%
!! GTAGATTAGCTTGGTTCTAT+AGG - chr3_4:74484117-74484136 None:intergenic 35.0%
! TATGTAAATCGGTTTCTTCG+AGG + chr3_4:74484151-74484170 Msa0521580:intron 35.0%
!!! TTCTTCGAGGAGTTTTTTAC+TGG + chr3_4:74484164-74484183 Msa0521580:intron 35.0%
CTAGAAGTTACTTCCTTAGT+TGG + chr3_4:74484270-74484289 Msa0521580:intron 35.0%
TTACTTCCTTAGTTGGGAAA+TGG + chr3_4:74484277-74484296 Msa0521580:intron 35.0%
CTCGAATGTAAAATGAAGTG+TGG - chr3_4:74484332-74484351 None:intergenic 35.0%
AGGACAAGACAAAACTATAC+TGG + chr3_4:74484472-74484491 Msa0521580:intron 35.0%
!!! TGTCTCATGGTTTTTTAGAG+AGG + chr3_4:74484578-74484597 Msa0521580:intron 35.0%
!!! GTCTCATGGTTTTTTAGAGA+GGG + chr3_4:74484579-74484598 Msa0521580:intron 35.0%
! GTTTGATTTAGAACAGGTCA+TGG - chr3_4:74484655-74484674 None:intergenic 35.0%
! TGACCTGTTCTAAATCAAAC+AGG + chr3_4:74484655-74484674 Msa0521580:intron 35.0%
! GACCTGTTCTAAATCAAACA+GGG + chr3_4:74484656-74484675 Msa0521580:intron 35.0%
! TACCCTGTTTGATTTAGAAC+AGG - chr3_4:74484661-74484680 None:intergenic 35.0%
TAAAAAACAGGGGACTAAAC+AGG - chr3_4:74484699-74484718 None:intergenic 35.0%
!! TGTAGATTAGCTTGGTTCTA+GGG - chr3_4:74484118-74484137 None:intergenic 35.0%
!! ATGTAGATTAGCTTGGTTCT+AGG - chr3_4:74484119-74484138 None:intergenic 35.0%
! TTGGACTATGTAGATTAGCT+TGG - chr3_4:74484781-74484800 None:intergenic 35.0%
! GTTAACGTAAATCGGTTTCT+TGG + chr3_4:74484807-74484826 Msa0521580:intron 35.0%
!!! TTATGTTTTGGCTTGTGCTT+TGG + chr3_4:74484880-74484899 Msa0521580:intron 35.0%
!!! TATGTTTTGGCTTGTGCTTT+GGG + chr3_4:74484881-74484900 Msa0521580:intron 35.0%
!! GCTTTGGCTCTTTATTTCTT+CGG + chr3_4:74484929-74484948 Msa0521580:intron 35.0%
TTCACTTTGACAAGTGATGA+CGG - chr3_4:74485328-74485347 None:intergenic 35.0%
GATATGGTAGTTAGAGAAAG+TGG - chr3_4:74485378-74485397 None:intergenic 35.0%
ATCATGTTGTGCAGATCATT+TGG - chr3_4:74485535-74485554 None:intergenic 35.0%
!! GAAAAGATTACCGATTCAGA+AGG - chr3_4:74485688-74485707 None:intergenic 35.0%
! AGCTTTCTAAAGGAGTTCAA+TGG - chr3_4:74485726-74485745 None:intergenic 35.0%
GGAGAAAGAAGCTAATATAC+TGG - chr3_4:74485888-74485907 None:intergenic 35.0%
GAATAGTGACTTCACAAATG+TGG + chr3_4:74485969-74485988 Msa0521580:intron 35.0%
! ACAATGTCTTGTGATGGAAT+TGG + chr3_4:74486177-74486196 Msa0521580:CDS 35.0%
GTTATCTGATGGAATGTACT+TGG - chr3_4:74486206-74486225 None:intergenic 35.0%
GGGACATGTATTTGTCATTA+AGG + chr3_4:74486513-74486532 Msa0521580:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_4:74486548-74486567 Msa0521580:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_4:74486560-74486579 Msa0521580:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_4:74486561-74486580 Msa0521580:intron 35.0%
AGTGTTAACCTTAGACTTAG+AGG + chr3_4:74486585-74486604 Msa0521580:intron 35.0%
ATGCTTGTGGTATTCATACA+TGG + chr3_4:74486548-74486567 Msa0521580:intron 35.0%
TTCATACATGGACACATAAC+TGG + chr3_4:74486560-74486579 Msa0521580:intron 35.0%
TCATACATGGACACATAACT+GGG + chr3_4:74486561-74486580 Msa0521580:intron 35.0%
!! TCAATAAGTGCTGATCATGT+AGG + chr3_4:74487011-74487030 Msa0521580:intron 35.0%
CAGCTTATACAGAGTTTATG+TGG - chr3_4:74487089-74487108 None:intergenic 35.0%
AAACTGTTTAACAAACGAGG+GGG + chr3_4:74487334-74487353 Msa0521580:intron 35.0%
ATCAGAAATCACATTGCTTC+TGG - chr3_4:74487519-74487538 None:intergenic 35.0%
GAAAGTAACACCTATGAGAT+AGG + chr3_4:74487766-74487785 Msa0521580:CDS 35.0%
GAGTTACTTACCTATCTCAT+AGG - chr3_4:74487779-74487798 None:intergenic 35.0%
!!! TTTTTTCTCTAGCACATTGG+GGG - chr3_4:74487801-74487820 None:intergenic 35.0%
!!! CTTTTTTCTCTAGCACATTG+GGG - chr3_4:74487802-74487821 None:intergenic 35.0%
!!! CCTTTTTTCTCTAGCACATT+GGG - chr3_4:74487803-74487822 None:intergenic 35.0%
CCAATGTGCTAGAGAAAAAA+GGG + chr3_4:74487801-74487820 Msa0521580:intron 35.0%
CAATGTGCTAGAGAAAAAAG+GGG + chr3_4:74487802-74487821 Msa0521580:intron 35.0%
CATAATTCTGTCACTGTAGT+TGG - chr3_4:74487939-74487958 None:intergenic 35.0%
! GAATTGATTCCCTTGCAATT+GGG - chr3_4:74487986-74488005 None:intergenic 35.0%
CAATTGCAAGGGAATCAATT+CGG + chr3_4:74487985-74488004 Msa0521580:CDS 35.0%
AATTGCAAGGGAATCAATTC+GGG + chr3_4:74487986-74488005 Msa0521580:CDS 35.0%
AGCGGTACAATATTACTCTT+GGG - chr3_4:74488157-74488176 None:intergenic 35.0%
AAGCGGTACAATATTACTCT+TGG - chr3_4:74488158-74488177 None:intergenic 35.0%
!!! CATGACATATTGTTTTGACC+TGG + chr3_4:74488207-74488226 Msa0521580:intron 35.0%
TACTCTATTCTACCATTACC+AGG - chr3_4:74488228-74488247 None:intergenic 35.0%
ATACAATCTTGACTCCATTG+AGG - chr3_4:74488308-74488327 None:intergenic 35.0%
! CAAGATTGTATTGCTGTTGT+AGG + chr3_4:74488317-74488336 Msa0521580:CDS 35.0%
TGGAAAGTCTGGTTGAAAAT+TGG + chr3_4:74488441-74488460 Msa0521580:CDS 35.0%
GGAAAGTCTGGTTGAAAATT+GGG + chr3_4:74488442-74488461 Msa0521580:CDS 35.0%
!! AAAAAGCGTTCATGCTTAAC+AGG - chr3_4:74488720-74488739 None:intergenic 35.0%
TTAGAACATCGCTACAGTAT+TGG + chr3_4:74488806-74488825 Msa0521580:intron 35.0%
GGGAAGACACTTAAAAACTA+TGG + chr3_4:74488925-74488944 Msa0521580:intron 35.0%
TTAAAAACTATGGCTGATCC+CGG + chr3_4:74488935-74488954 Msa0521580:intron 35.0%
TTGCGTCTTATATTACAGAG+GGG - chr3_4:74489012-74489031 None:intergenic 35.0%
TATTAGGTGTTAAGTTCCAC+GGG + chr3_4:74489050-74489069 Msa0521580:intron 35.0%
ACTTAATAGCAATGCTCTGT+GGG - chr3_4:74489101-74489120 None:intergenic 35.0%
AACTTAATAGCAATGCTCTG+TGG - chr3_4:74489102-74489121 None:intergenic 35.0%
GAAATTGCATAGCAAGTCAT+GGG - chr3_4:74489172-74489191 None:intergenic 35.0%
!! CATGACTTGCTATGCAATTT+CGG + chr3_4:74489171-74489190 Msa0521580:intron 35.0%
! AAAGCAGTGAGTTGAATCTT+AGG - chr3_4:74489320-74489339 None:intergenic 35.0%
AAAAATGAGTGTCTTGATGC+AGG + chr3_4:74489469-74489488 Msa0521580:intron 35.0%
ATTGCAGGATGTTCATGATA+GGG + chr3_4:74489723-74489742 Msa0521580:intron 35.0%
GCTTCTACAACACAATGTAT+CGG + chr3_4:74489762-74489781 Msa0521580:CDS 35.0%
! AATACGGAAACTGCTTGTTT+TGG - chr3_4:74489811-74489830 None:intergenic 35.0%
AAATCAATCCAGACTGAATG+TGG - chr3_4:74489930-74489949 None:intergenic 35.0%
TTGGACATTTCTCAGACATA+TGG + chr3_4:74490134-74490153 Msa0521580:intron 35.0%
TGTGACATGATTAGAAGTCA+AGG - chr3_4:74490689-74490708 None:intergenic 35.0%
AGCACAAGTTTAGATGAATG+AGG - chr3_4:74490857-74490876 None:intergenic 35.0%
AAAGATGATGTGAGAGATAC+TGG + chr3_4:74491200-74491219 Msa0521580:CDS 35.0%
ACTACCAATATCCTTATCAG+AGG + chr3_4:74491463-74491482 Msa0521580:CDS 35.0%
CAAACCTCTGATAAGGATAT+TGG - chr3_4:74491470-74491489 None:intergenic 35.0%
TTCAAAGCAAACCTCTGATA+AGG - chr3_4:74491477-74491496 None:intergenic 35.0%
!!! TACTGGACATTTTTTGGTGT+TGG - chr3_4:74491757-74491776 None:intergenic 35.0%
CCACAGATAAACCAATATAC+TGG - chr3_4:74491774-74491793 None:intergenic 35.0%
!! CCAGTATATTGGTTTATCTG+TGG + chr3_4:74491771-74491790 Msa0521580:intron 35.0%
TCAATGATGCAATTGCAAGA+GGG - chr3_4:74491844-74491863 None:intergenic 35.0%
AGAACTTGAAATTAGGAGAC+TGG - chr3_4:74491931-74491950 None:intergenic 35.0%
CAAATTTGGACAAAGCTGAT+TGG - chr3_4:74492087-74492106 None:intergenic 35.0%
! CAATCAGCTTTGTCCAAATT+TGG + chr3_4:74492085-74492104 Msa0521580:CDS 35.0%
GTATGCACCATTAAGTTTCA+GGG - chr3_4:74492115-74492134 None:intergenic 35.0%
AGTATGCACCATTAAGTTTC+AGG - chr3_4:74492116-74492135 None:intergenic 35.0%
TGCATTGTTATACACTGATC+TGG - chr3_4:74492247-74492266 None:intergenic 35.0%
AGATCAGTGTATAACAATGC+AGG + chr3_4:74492246-74492265 Msa0521580:three_prime_UTR 35.0%
GATCAGTGTATAACAATGCA+GGG + chr3_4:74492247-74492266 Msa0521580:three_prime_UTR 35.0%
ATCAGTGTATAACAATGCAG+GGG + chr3_4:74492248-74492267 Msa0521580:three_prime_UTR 35.0%
AATGAATCACGATGTTGGAT+TGG - chr3_4:74492310-74492329 None:intergenic 35.0%
CATCTAATGAATCACGATGT+TGG - chr3_4:74492315-74492334 None:intergenic 35.0%
CAAGCGATTATTGTGTTCTA+CGG + chr3_4:74492411-74492430 Msa0521580:three_prime_UTR 35.0%
GGAAGATGAAGATCGATAGT+TGG - chr3_4:74482941-74482960 None:intergenic 40.0%
TCTTCATCTTCCATCCTTGT+TGG + chr3_4:74482949-74482968 Msa0521580:five_prime_UTR 40.0%
TGAGATCTAACCAACAAGGA+TGG - chr3_4:74482962-74482981 None:intergenic 40.0%
GAAGGAGATCGATTAGATTG+CGG - chr3_4:74483060-74483079 None:intergenic 40.0%
GTAAGATGAAGAGATGAGTG+AGG - chr3_4:74483109-74483128 None:intergenic 40.0%
ATCAGATACTTCACTCTTCC+TGG - chr3_4:74483508-74483527 None:intergenic 40.0%
ATCGTCAAAAGAGCAAGATC+CGG - chr3_4:74483741-74483760 None:intergenic 40.0%
TCAAAGGGATTGTAAGGATC+AGG + chr3_4:74483770-74483789 Msa0521580:CDS 40.0%
! AACTTGGTGGAGTATTTGGT+TGG + chr3_4:74483846-74483865 Msa0521580:CDS 40.0%
! ACTTGGTGGAGTATTTGGTT+GGG + chr3_4:74483847-74483866 Msa0521580:CDS 40.0%
AGTATTTGGTTGGGCCTTTA+GGG + chr3_4:74483856-74483875 Msa0521580:CDS 40.0%
TAATAGTTATGTCAGGACGG+TGG + chr3_4:74483896-74483915 Msa0521580:CDS 40.0%
AGTTCTGTTCAACTTCGTGA+AGG + chr3_4:74484080-74484099 Msa0521580:intron 40.0%
CAACTTCGTGAAGGTTTAAG+AGG + chr3_4:74484089-74484108 Msa0521580:intron 40.0%
!!! ATTTTTTTGGGCCTGTGCTT+TGG + chr3_4:74484246-74484265 Msa0521580:intron 40.0%
!!! TTTTTTTGGGCCTGTGCTTT+GGG + chr3_4:74484247-74484266 Msa0521580:intron 40.0%
TTCCTTAGTTGGGAAATGGA+GGG + chr3_4:74484281-74484300 Msa0521580:intron 40.0%
CGAGTATAATTCCCTTGTAC+CGG + chr3_4:74484348-74484367 Msa0521580:intron 40.0%
TATTCTGGTAGTCTGTACTC+CGG + chr3_4:74484546-74484565 Msa0521580:intron 40.0%
! CCATGAGACAACTTTTTGTC+CGG - chr3_4:74484568-74484587 None:intergenic 40.0%
!! GTAGATTAGCTTGGTTCTAG+GGG - chr3_4:74484772-74484791 None:intergenic 40.0%
TGTAGTTACTGGAGAGAGAA+AGG + chr3_4:74484830-74484849 Msa0521580:intron 40.0%
GTAGTTACTGGAGAGAGAAA+GGG + chr3_4:74484831-74484850 Msa0521580:intron 40.0%
TAGTAGTTACCTCCGTAGTT+GGG + chr3_4:74484905-74484924 Msa0521580:intron 40.0%
ATCAATCCATGTCCAGTAGA+GGG - chr3_4:74484987-74485006 None:intergenic 40.0%
AATCAATCCATGTCCAGTAG+AGG - chr3_4:74484988-74485007 None:intergenic 40.0%
! TGAACTCCTTTAGAAAGCTG+AGG + chr3_4:74485727-74485746 Msa0521580:intron 40.0%
TATGCACCTCAGCTTTCTAA+AGG - chr3_4:74485736-74485755 None:intergenic 40.0%
AATGTCTTTCTCATTGTGGC+AGG + chr3_4:74486044-74486063 Msa0521580:intron 40.0%
! ATGTCTTGTGATGGAATTGG+TGG + chr3_4:74486180-74486199 Msa0521580:CDS 40.0%
CATGCTGTAGTCTATCTTCA+AGG - chr3_4:74486255-74486274 None:intergenic 40.0%
GATAGACTACAGCATGCAAA+TGG + chr3_4:74486259-74486278 Msa0521580:CDS 40.0%
CCATAGATAAAGTCAAGTGC+AGG - chr3_4:74486315-74486334 None:intergenic 40.0%
CCTGCACTTGACTTTATCTA+TGG + chr3_4:74486312-74486331 Msa0521580:CDS 40.0%
GTAGCTCACTGAATCATACA+CGG + chr3_4:74486490-74486509 Msa0521580:intron 40.0%
TAGCTCACTGAATCATACAC+GGG + chr3_4:74486491-74486510 Msa0521580:intron 40.0%
TACTTGCACCTCTAAGTCTA+AGG - chr3_4:74486596-74486615 None:intergenic 40.0%
CAGTTCCTTAAGGTTCTGTA+AGG + chr3_4:74486660-74486679 Msa0521580:intron 40.0%
TCCTTTGGTTGAAACCAGTT+TGG + chr3_4:74486772-74486791 Msa0521580:intron 40.0%
CACTCTCATTTCCTCTTCTA+TGG - chr3_4:74487062-74487081 None:intergenic 40.0%
GAGCTCATACATGGTATAAG+TGG + chr3_4:74487129-74487148 Msa0521580:intron 40.0%
! AGCTGAGCCTTATGCAAATA+TGG - chr3_4:74487401-74487420 None:intergenic 40.0%
TAAGGCTCAGCTTGATTACA+TGG + chr3_4:74487409-74487428 Msa0521580:intron 40.0%
AGCTCACTTGAGTTAAGAGA+GGG - chr3_4:74487582-74487601 None:intergenic 40.0%
!! ATAGAAGTGTTTGTAGTCCG+AGG - chr3_4:74487680-74487699 None:intergenic 40.0%
CATATGATGGCTCGTTATAC+TGG - chr3_4:74487705-74487724 None:intergenic 40.0%
CCCAATGTGCTAGAGAAAAA+AGG + chr3_4:74487800-74487819 Msa0521580:intron 40.0%
!!! CCCTTTTTTCTCTAGCACAT+TGG - chr3_4:74487804-74487823 None:intergenic 40.0%
GCTAGAGAAAAAAGGGGATT+AGG + chr3_4:74487808-74487827 Msa0521580:intron 40.0%
ATGTTGACATCCCAATTGCA+AGG + chr3_4:74487973-74487992 Msa0521580:CDS 40.0%
TGTTGACATCCCAATTGCAA+GGG + chr3_4:74487974-74487993 Msa0521580:CDS 40.0%
! CGAATTGATTCCCTTGCAAT+TGG - chr3_4:74487987-74488006 None:intergenic 40.0%
! CAAATACTTGCTAGATACCC+TGG + chr3_4:74488123-74488142 Msa0521580:intron 40.0%
CAACAATGTCCAAGAACCTA+AGG + chr3_4:74488352-74488371 Msa0521580:CDS 40.0%
ACCAGACTTTCCAAGACATA+CGG - chr3_4:74488434-74488453 None:intergenic 40.0%
TTGGGATAGTTGGATCATGA+AGG - chr3_4:74488564-74488583 None:intergenic 40.0%
ATCATTCAAGACCAAAGAGC+CGG - chr3_4:74488640-74488659 None:intergenic 40.0%
ATATAAGACGCAATTGTGGC+TGG + chr3_4:74489019-74489038 Msa0521580:intron 40.0%
CGAAATTGCATAGCAAGTCA+TGG - chr3_4:74489173-74489192 None:intergenic 40.0%
!! CATGAGCTTTTGTTGATTGC+AGG + chr3_4:74489708-74489727 Msa0521580:intron 40.0%
GATTGCAGGATGTTCATGAT+AGG + chr3_4:74489722-74489741 Msa0521580:intron 40.0%
TCTACAACACAATGTATCGG+TGG + chr3_4:74489765-74489784 Msa0521580:CDS 40.0%
! GCTCTGAGTATCAGCAAATA+CGG - chr3_4:74489827-74489846 None:intergenic 40.0%
! GCAGTAAATTTTGCCCGAAA+TGG - chr3_4:74489964-74489983 None:intergenic 40.0%
AAGGATGATGATCAATGAGG+AGG + chr3_4:74490287-74490306 Msa0521580:intron 40.0%
GGGGAGAAACACAGTTTAAA+TGG - chr3_4:74490656-74490675 None:intergenic 40.0%
AAACTTGTGCTTCTATGCCT+TGG + chr3_4:74490866-74490885 Msa0521580:intron 40.0%
GGGAAGAAATAGACAAGGAT+CGG - chr3_4:74490970-74490989 None:intergenic 40.0%
CTGAAAACTCAAATGTCCCT+CGG - chr3_4:74491076-74491095 None:intergenic 40.0%
TGGCAATCTGTCTATTAGTG+CGG + chr3_4:74491103-74491122 Msa0521580:CDS 40.0%
! TCTCACATCATCTTTTTCCG+TGG - chr3_4:74491195-74491214 None:intergenic 40.0%
GAAAATGCCAAATCTGCAAG+CGG - chr3_4:74491290-74491309 None:intergenic 40.0%
GATCATCAATTGCCAATGCT+TGG - chr3_4:74491331-74491350 None:intergenic 40.0%
! TTGGCAATTGATGATCTGCT+TGG + chr3_4:74491335-74491354 Msa0521580:CDS 40.0%
GTCAATGATGCAATTGCAAG+AGG - chr3_4:74491845-74491864 None:intergenic 40.0%
TCAATACAGTGCATTGCATC+CGG + chr3_4:74491902-74491921 Msa0521580:CDS 40.0%
GTTTCAGGGCAAACCAAATT+TGG - chr3_4:74492101-74492120 None:intergenic 40.0%
! TGGTTTGCCCTGAAACTTAA+TGG + chr3_4:74492105-74492124 Msa0521580:exon 40.0%
TCAGTGTATAACAATGCAGG+GGG + chr3_4:74492249-74492268 Msa0521580:three_prime_UTR 40.0%
AGTCGTAGAAAACATGAGTC+TGG + chr3_4:74492341-74492360 Msa0521580:three_prime_UTR 40.0%
GTCGTAGAAAACATGAGTCT+GGG + chr3_4:74492342-74492361 Msa0521580:three_prime_UTR 40.0%
TTCCGCACCAAATTTAATCG+CGG - chr3_4:74492448-74492467 None:intergenic 40.0%
GTTTGCAAGTCAACTTCCAG+TGG + chr3_4:74483017-74483036 Msa0521580:five_prime_UTR 45.0%
AAGTCAACTTCCAGTGGCTA+TGG + chr3_4:74483023-74483042 Msa0521580:exon 45.0%
TGAAGAGATGAGTGAGGGAA+CGG - chr3_4:74483103-74483122 None:intergenic 45.0%
!!! ACATCGCAATTGCCGCTTTT+TGG + chr3_4:74483186-74483205 Msa0521580:intron 45.0%
CTCTTAGAGTCATCAGTACC+CGG - chr3_4:74483570-74483589 None:intergenic 45.0%
!! GGGTACTGATGACTCTAAGA+GGG + chr3_4:74483569-74483588 Msa0521580:CDS 45.0%
TTCGTCTCTCTTTGGTGAGA+TGG + chr3_4:74483638-74483657 Msa0521580:CDS 45.0%
AACTCCTTAATGCCAGTCCT+CGG - chr3_4:74483806-74483825 None:intergenic 45.0%
GAGTTTGTGTTCACTTCGAG+TGG + chr3_4:74483821-74483840 Msa0521580:CDS 45.0%
GAGTATTTGGTTGGGCCTTT+AGG + chr3_4:74483855-74483874 Msa0521580:CDS 45.0%
ATCTGCATCAATACACGTGG+AGG - chr3_4:74483958-74483977 None:intergenic 45.0%
GCATTTGATGCTCAATGACC+AGG + chr3_4:74483995-74484014 Msa0521580:CDS 45.0%
ATGACCAGGATACTCAGGTA+AGG + chr3_4:74484009-74484028 Msa0521580:intron 45.0%
CAATCCTTACCTGAGTATCC+TGG - chr3_4:74484016-74484035 None:intergenic 45.0%
! ATTGAGGGAGGAGCTAGTTT+AGG + chr3_4:74484214-74484233 Msa0521580:intron 45.0%
TAACTTCTAGCCCAAAGCAC+AGG - chr3_4:74484260-74484279 None:intergenic 45.0%
CTTCCTTAGTTGGGAAATGG+AGG + chr3_4:74484280-74484299 Msa0521580:intron 45.0%
TCCTTAGTTGGGAAATGGAG+GGG + chr3_4:74484282-74484301 Msa0521580:intron 45.0%
CCAATCACTATCCGGTACAA+GGG - chr3_4:74484362-74484381 None:intergenic 45.0%
ACCAATCACTATCCGGTACA+AGG - chr3_4:74484363-74484382 None:intergenic 45.0%
AAGTACATGCCTCCATGCTT+GGG - chr3_4:74484390-74484409 None:intergenic 45.0%
TAAGTACATGCCTCCATGCT+TGG - chr3_4:74484391-74484410 None:intergenic 45.0%
! AAGCATGGAGGCATGTACTT+AGG + chr3_4:74484390-74484409 Msa0521580:intron 45.0%
! AGCATGGAGGCATGTACTTA+GGG + chr3_4:74484391-74484410 Msa0521580:intron 45.0%
CCGGACAAAAAGTTGTCTCA+TGG + chr3_4:74484565-74484584 Msa0521580:intron 45.0%
GCAAGAGACTGGACAAAAAC+AGG - chr3_4:74484614-74484633 None:intergenic 45.0%
GTCATGGGATTGAACAAGAC+AGG - chr3_4:74484639-74484658 None:intergenic 45.0%
! CGGTTTCTTGGTGTAGTTAC+TGG + chr3_4:74484819-74484838 Msa0521580:intron 45.0%
CTAGTAGTTACCTCCGTAGT+TGG + chr3_4:74484904-74484923 Msa0521580:intron 45.0%
ATAGTATGATCCCCCTCTAC+TGG + chr3_4:74484972-74484991 Msa0521580:intron 45.0%
TCAATCCATGTCCAGTAGAG+GGG - chr3_4:74484986-74485005 None:intergenic 45.0%
!!! TTTTAAAATGGGAACCCCGG+AGG - chr3_4:74485800-74485819 None:intergenic 45.0%
! GTTTGCTACGTGCAGCATTA+AGG + chr3_4:74486138-74486157 Msa0521580:intron 45.0%
ATGGGCACAATGTCTTGTGA+TGG + chr3_4:74486171-74486190 Msa0521580:CDS 45.0%
!! TGCAAATGGTGCTGTTGTCT+TGG + chr3_4:74486273-74486292 Msa0521580:CDS 45.0%
TATGGCTGATGTACATCAGC+AGG + chr3_4:74486330-74486349 Msa0521580:CDS 45.0%
AGCTCACTGAATCATACACG+GGG + chr3_4:74486492-74486511 Msa0521580:intron 45.0%
GAGCTATCTGTGAGTTCCTT+TGG + chr3_4:74486620-74486639 Msa0521580:intron 45.0%
CATCGCCTTACAGAACCTTA+AGG - chr3_4:74486531-74486550 None:intergenic 45.0%
! GCCAAACTGGTTTCAACCAA+AGG - chr3_4:74486776-74486795 None:intergenic 45.0%
CCAGCTTTACTATACTGCTC+AGG - chr3_4:74486834-74486853 None:intergenic 45.0%
CCTGAGCAGTATAGTAAAGC+TGG + chr3_4:74486831-74486850 Msa0521580:intron 45.0%
! TGTTTCTGTGAGCCATCTTG+TGG + chr3_4:74487107-74487126 Msa0521580:intron 45.0%
CATGTATGAGCTCCACAAGA+TGG - chr3_4:74487122-74487141 None:intergenic 45.0%
CATCTTGTGGAGCTCATACA+TGG + chr3_4:74487120-74487139 Msa0521580:intron 45.0%
GCTCACTTGAGTTAAGAGAG+GGG - chr3_4:74487581-74487600 None:intergenic 45.0%
GAGCTCACTTGAGTTAAGAG+AGG - chr3_4:74487583-74487602 None:intergenic 45.0%
CTCTTAACTCAAGTGAGCTC+AGG + chr3_4:74487583-74487602 Msa0521580:CDS 45.0%
! GCAGTTTCTGGAGATGGAAA+AGG + chr3_4:74488067-74488086 Msa0521580:CDS 45.0%
! CTATGTTACGTCTGAAGCTC+TGG + chr3_4:74488091-74488110 Msa0521580:CDS 45.0%
ACTCTTGGGCAAAAATGCCA+GGG - chr3_4:74488143-74488162 None:intergenic 45.0%
TACTCTTGGGCAAAAATGCC+AGG - chr3_4:74488144-74488163 None:intergenic 45.0%
TGTCCAAGAACCTAAGGCTA+AGG + chr3_4:74488358-74488377 Msa0521580:CDS 45.0%
TCCGTATGTCTTGGAAAGTC+TGG + chr3_4:74488430-74488449 Msa0521580:CDS 45.0%
TCTGGTTGAAAATTGGGACG+AGG + chr3_4:74488448-74488467 Msa0521580:CDS 45.0%
! TATACCTCTAACCGGCTCTT+TGG + chr3_4:74488626-74488645 Msa0521580:intron 45.0%
ACTTCCTGATATCAACAGCC+GGG - chr3_4:74488956-74488975 None:intergenic 45.0%
GACTTCCTGATATCAACAGC+CGG - chr3_4:74488957-74488976 None:intergenic 45.0%
CTATTGTCTAGTATGACCCG+TGG - chr3_4:74489069-74489088 None:intergenic 45.0%
TTTGCCAAACTCACTAGAGC+AGG - chr3_4:74489235-74489254 None:intergenic 45.0%
GACGGAAATGCAAACTGAAC+TGG - chr3_4:74489279-74489298 None:intergenic 45.0%
! CAGTGAGTTGAATCTTAGGC+TGG - chr3_4:74489316-74489335 None:intergenic 45.0%
!! AGATTTGGTGAGCAACTGCA+AGG - chr3_4:74489385-74489404 None:intergenic 45.0%
GTGAAAATCAGCAAGACCAG+CGG - chr3_4:74489579-74489598 None:intergenic 45.0%
!!! TGGTCTTGCTGATTTTCACC+AGG + chr3_4:74489580-74489599 Msa0521580:CDS 45.0%
!!! CGGAAACTGCTTGTTTTGGA+GGG - chr3_4:74489807-74489826 None:intergenic 45.0%
!!! ACGGAAACTGCTTGTTTTGG+AGG - chr3_4:74489808-74489827 None:intergenic 45.0%
CTGACTTACCACATTCAGTC+TGG + chr3_4:74489919-74489938 Msa0521580:intron 45.0%
! ATGAAGCACTAACACTGCTG+AGG + chr3_4:74490006-74490025 Msa0521580:intron 45.0%
ATACATGTCGTACGTGTGTC+GGG - chr3_4:74490055-74490074 None:intergenic 45.0%
GATACATGTCGTACGTGTGT+CGG - chr3_4:74490056-74490075 None:intergenic 45.0%
GACACACGTACGACATGTAT+CGG + chr3_4:74490055-74490074 Msa0521580:intron 45.0%
ATGAAGCACAGACTCCAACA+AGG - chr3_4:74490580-74490599 None:intergenic 45.0%
GGGAAGGGAAGAAATAGACA+AGG - chr3_4:74490975-74490994 None:intergenic 45.0%
CAGTGAACATGTAAGAAGGC+TGG - chr3_4:74491043-74491062 None:intergenic 45.0%
TTCACTGATAAGGAACACCG+AGG + chr3_4:74491056-74491075 Msa0521580:CDS 45.0%
TCACTGATAAGGAACACCGA+GGG + chr3_4:74491057-74491076 Msa0521580:CDS 45.0%
CTGTCTATTAGTGCGGAATC+CGG + chr3_4:74491110-74491129 Msa0521580:CDS 45.0%
GGATCTGCTTCTAAGTACCA+CGG + chr3_4:74491175-74491194 Msa0521580:CDS 45.0%
GTGAGAGATACTGGAAGCAA+TGG + chr3_4:74491209-74491228 Msa0521580:CDS 45.0%
TTCACAACCGCTTGCAGATT+TGG + chr3_4:74491280-74491299 Msa0521580:CDS 45.0%
!!! CAGTACAGCTTTTGGGTTGA+GGG - chr3_4:74491411-74491430 None:intergenic 45.0%
! CAGGATCCAGTACAGCTTTT+GGG - chr3_4:74491418-74491437 None:intergenic 45.0%
CATTTCTGCTGAAATGTGCC+AGG - chr3_4:74491437-74491456 None:intergenic 45.0%
CTGGCACATTTCAGCAGAAA+TGG + chr3_4:74491435-74491454 Msa0521580:CDS 45.0%
GTGATGTGGCAAGACTTTAC+TGG - chr3_4:74491557-74491576 None:intergenic 45.0%
AATGACTTTGCATGTGCCGT+AGG - chr3_4:74491883-74491902 None:intergenic 45.0%
TGATGACCAAAGCTCATCAC+AGG + chr3_4:74492045-74492064 Msa0521580:CDS 45.0%
AGAATGCCTGTGATGAGCTT+TGG - chr3_4:74492054-74492073 None:intergenic 45.0%
! TGGTGCATACTTTTGAGCTG+TGG + chr3_4:74492125-74492144 Msa0521580:three_prime_UTR 45.0%
! ACTGATCTGGTCCGTTTTAG+GGG - chr3_4:74492234-74492253 None:intergenic 45.0%
! CACTGATCTGGTCCGTTTTA+GGG - chr3_4:74492235-74492254 None:intergenic 45.0%
! ACACTGATCTGGTCCGTTTT+AGG - chr3_4:74492236-74492255 None:intergenic 45.0%
GATTGCGCCGCGATTAAATT+TGG + chr3_4:74492438-74492457 Msa0521580:three_prime_UTR 45.0%
!!! TATTTCAATTTTTTTTAAAT+AGG - chr3_4:74485502-74485521 None:intergenic 5.0%
!! TAAAAAAAAAAAAAAAGATT+TGG - chr3_4:74489400-74489419 None:intergenic 5.0%
!!! TTTTTAATTTGATAAATAAT+AGG + chr3_4:74489414-74489433 Msa0521580:intron 5.0%
!! TTGACTTGCAAACGCTCCTC+GGG - chr3_4:74483010-74483029 None:intergenic 50.0%
!! GTTGACTTGCAAACGCTCCT+CGG - chr3_4:74483011-74483030 None:intergenic 50.0%
GGAGATCGATTAGATTGCGG+TGG - chr3_4:74483057-74483076 None:intergenic 50.0%
!! CGGGTACTGATGACTCTAAG+AGG + chr3_4:74483568-74483587 Msa0521580:CDS 50.0%
AATGCCAGTCCTCGGATCAT+CGG - chr3_4:74483798-74483817 None:intergenic 50.0%
! TGATCCGAGGACTGGCATTA+AGG + chr3_4:74483799-74483818 Msa0521580:CDS 50.0%
TTCACTTCGAGTGGCGAACT+TGG + chr3_4:74483830-74483849 Msa0521580:CDS 50.0%
! GGCGAACTTGGTGGAGTATT+TGG + chr3_4:74483842-74483861 Msa0521580:CDS 50.0%
TCCTTCAACCCTGACCCTAA+AGG - chr3_4:74483873-74483892 None:intergenic 50.0%
GCTCAATGACCAGGATACTC+AGG + chr3_4:74484004-74484023 Msa0521580:CDS 50.0%
ACCCCTCCATTTCCCAACTA+AGG - chr3_4:74484286-74484305 None:intergenic 50.0%
AGTTGGGAAATGGAGGGGTT+TGG + chr3_4:74484287-74484306 Msa0521580:intron 50.0%
CCCTTGTACCGGATAGTGAT+TGG + chr3_4:74484359-74484378 Msa0521580:intron 50.0%
GGGAACGACCAATCACTATC+CGG - chr3_4:74484370-74484389 None:intergenic 50.0%
! TGATTGGTCGTTCCCAAGCA+TGG + chr3_4:74484375-74484394 Msa0521580:intron 50.0%
CAAGACAGGTAGCAAGAGAC+TGG - chr3_4:74484625-74484644 None:intergenic 50.0%
AGAGCCAAAGCTCCCAACTA+CGG - chr3_4:74484920-74484939 None:intergenic 50.0%
CAATCCATGTCCAGTAGAGG+GGG - chr3_4:74484985-74485004 None:intergenic 50.0%
!! CTCTGAGGTGGTTGACTCTA+AGG - chr3_4:74485615-74485634 None:intergenic 50.0%
CTTAGAGTCAACCACCTCAG+AGG + chr3_4:74485613-74485632 Msa0521580:CDS 50.0%
GCTCACTGAATCATACACGG+GGG + chr3_4:74486493-74486512 Msa0521580:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_4:74486535-74486554 Msa0521580:intron 50.0%
GTTCTGTAAGGCGATGCTTG+TGG + chr3_4:74486535-74486554 Msa0521580:intron 50.0%
GAGCTATCTGCGTGTTCCTT+TGG + chr3_4:74486757-74486776 Msa0521580:intron 50.0%
TACGGTGAACTGAGCCAAAC+TGG - chr3_4:74486789-74486808 None:intergenic 50.0%
TCAAGTGAGCTCAGGAAGTC+CGG + chr3_4:74487591-74487610 Msa0521580:CDS 50.0%
TCTAAGCCACCTGCATCTCT+TGG + chr3_4:74487630-74487649 Msa0521580:CDS 50.0%
GCATTACCAAGAGATGCAGG+TGG - chr3_4:74487639-74487658 None:intergenic 50.0%
CACGCATTACCAAGAGATGC+AGG - chr3_4:74487642-74487661 None:intergenic 50.0%
AGGGAATCAATTCGGGCTGT+TGG + chr3_4:74487993-74488012 Msa0521580:CDS 50.0%
! TGATCGGCTTCTGCAGTTTC+TGG + chr3_4:74488055-74488074 Msa0521580:CDS 50.0%
! GCTTCTGCAGTTTCTGGAGA+TGG + chr3_4:74488061-74488080 Msa0521580:CDS 50.0%
!! CTGCCTTAGCCTTAGGTTCT+TGG - chr3_4:74488364-74488383 None:intergenic 50.0%
! ATGAGAGCTGCCTTAGCCTT+AGG - chr3_4:74488371-74488390 None:intergenic 50.0%
AGGCTAAGGCAGCTCTCATA+TGG + chr3_4:74488372-74488391 Msa0521580:CDS 50.0%
GCAGCTCTCATATGGATGCT+GGG + chr3_4:74488380-74488399 Msa0521580:CDS 50.0%
CAGCTCTCATATGGATGCTG+GGG + chr3_4:74488381-74488400 Msa0521580:CDS 50.0%
AGCTCTCATATGGATGCTGG+GGG + chr3_4:74488382-74488401 Msa0521580:CDS 50.0%
GCATGATGCTCCGTATGTCT+TGG + chr3_4:74488421-74488440 Msa0521580:CDS 50.0%
AAGACCAAAGAGCCGGTTAG+AGG - chr3_4:74488633-74488652 None:intergenic 50.0%
TGATCCCGGCTGTTGATATC+AGG + chr3_4:74488949-74488968 Msa0521580:intron 50.0%
ATTACAGAGGGGACGACTTC+TGG - chr3_4:74489001-74489020 None:intergenic 50.0%
GTGGCTGGAGCCTTGATATT+AGG + chr3_4:74489034-74489053 Msa0521580:intron 50.0%
CAGTCCTGCTCTAGTGAGTT+TGG + chr3_4:74489228-74489247 Msa0521580:intron 50.0%
! GCATTTCCGTCTGCTTTGAG+CGG + chr3_4:74489288-74489307 Msa0521580:intron 50.0%
TCCCAGTGCTTTCTGAGTCT+CGG - chr3_4:74489546-74489565 None:intergenic 50.0%
GCACTAACACTGCTGAGGTT+AGG + chr3_4:74490011-74490030 Msa0521580:intron 50.0%
CGATGTTGACGTCTCCTTGT+TGG + chr3_4:74490563-74490582 Msa0521580:intron 50.0%
! TGCTTCTATGCCTTGGCTTG+AGG + chr3_4:74490873-74490892 Msa0521580:intron 50.0%
! GCTTCTATGCCTTGGCTTGA+GGG + chr3_4:74490874-74490893 Msa0521580:intron 50.0%
CGCAGGAACAACAGAATCTC+CGG - chr3_4:74491132-74491151 None:intergenic 50.0%
GAGAGTGGAGGCAAATGACA+AGG + chr3_4:74491154-74491173 Msa0521580:CDS 50.0%
TGAAGGGGCAGACCCATTAT+AGG - chr3_4:74491255-74491274 None:intergenic 50.0%
!!! TTTTGGGTTGAGGGTCAACG+GGG - chr3_4:74491402-74491421 None:intergenic 50.0%
!!! CTTTTGGGTTGAGGGTCAAC+GGG - chr3_4:74491403-74491422 None:intergenic 50.0%
!!! GCTTTTGGGTTGAGGGTCAA+CGG - chr3_4:74491404-74491423 None:intergenic 50.0%
!!! CCAGTACAGCTTTTGGGTTG+AGG - chr3_4:74491412-74491431 None:intergenic 50.0%
CCTCAACCCAAAAGCTGTAC+TGG + chr3_4:74491409-74491428 Msa0521580:CDS 50.0%
! CCAGGATCCAGTACAGCTTT+TGG - chr3_4:74491419-74491438 None:intergenic 50.0%
CCAAAAGCTGTACTGGATCC+TGG + chr3_4:74491416-74491435 Msa0521580:CDS 50.0%
! ATGTGCCGTAGGAGTGCATT+GGG - chr3_4:74491872-74491891 None:intergenic 50.0%
ATACAGTGCATTGCATCCGG+CGG + chr3_4:74491905-74491924 Msa0521580:CDS 50.0%
CTAATCCCCCTCCCCTAAAA+CGG + chr3_4:74492220-74492239 Msa0521580:three_prime_UTR 50.0%
!!! ATCTGGTCCGTTTTAGGGGA+GGG - chr3_4:74492230-74492249 None:intergenic 50.0%
TCTGGGTTGCAAGTGTGTAG+AGG + chr3_4:74492359-74492378 Msa0521580:three_prime_UTR 50.0%
! CGCCGCGATTAAATTTGGTG+CGG + chr3_4:74492443-74492462 Msa0521580:three_prime_UTR 50.0%
! CTAATGATGCAAGGTGCCTG+CGG + chr3_4:74492504-74492523 Msa0521580:three_prime_UTR 50.0%
GCTAAAAAAGGAGACACCGC+AGG - chr3_4:74492523-74492542 None:intergenic 50.0%
CGACGTAGTAGAAGCTGACG+TGG - chr3_4:74482794-74482813 None:intergenic 55.0%
CGATTAGATTGCGGTGGTGC+AGG - chr3_4:74483051-74483070 None:intergenic 55.0%
TTACAGCTACGGCAGCTTGC+TGG + chr3_4:74483534-74483553 Msa0521580:CDS 55.0%
! TACAGCTACGGCAGCTTGCT+GGG + chr3_4:74483535-74483554 Msa0521580:CDS 55.0%
GATCAGGATCCGATGATCCG+AGG + chr3_4:74483786-74483805 Msa0521580:CDS 55.0%
ACTTCGAGTGGCGAACTTGG+TGG + chr3_4:74483833-74483852 Msa0521580:CDS 55.0%
!! TTGGTTGGGCCTTTAGGGTC+AGG + chr3_4:74483861-74483880 Msa0521580:CDS 55.0%
!! TGGTTGGGCCTTTAGGGTCA+GGG + chr3_4:74483862-74483881 Msa0521580:CDS 55.0%
!! GCCTTTAGGGTCAGGGTTGA+AGG + chr3_4:74483869-74483888 Msa0521580:CDS 55.0%
GTCAGGACGGTGGCAGTAAT+CGG + chr3_4:74483906-74483925 Msa0521580:CDS 55.0%
TTGGTCGTTCCCAAGCATGG+AGG + chr3_4:74484378-74484397 Msa0521580:intron 55.0%
ACCTCCGTAGTTGGGAGCTT+TGG + chr3_4:74484913-74484932 Msa0521580:intron 55.0%
TGATCCCCCTCTACTGGACA+TGG + chr3_4:74484978-74484997 Msa0521580:intron 55.0%
CACCTCAGAGGAAGCAGCTA+GGG + chr3_4:74485625-74485644 Msa0521580:CDS 55.0%
GCTTCAAAACCACCCTCCTC+CGG + chr3_4:74485781-74485800 Msa0521580:intron 55.0%
CTTCAAAACCACCCTCCTCC+GGG + chr3_4:74485782-74485801 Msa0521580:intron 55.0%
TTCAAAACCACCCTCCTCCG+GGG + chr3_4:74485783-74485802 Msa0521580:intron 55.0%
AAAATGGGAACCCCGGAGGA+GGG - chr3_4:74485796-74485815 None:intergenic 55.0%
TAAAATGGGAACCCCGGAGG+AGG - chr3_4:74485797-74485816 None:intergenic 55.0%
GGCAGCTCTCATATGGATGC+TGG + chr3_4:74488379-74488398 Msa0521580:CDS 55.0%
CTGGTTCCGCTCAAAGCAGA+CGG - chr3_4:74489297-74489316 None:intergenic 55.0%
AGTGCTTTCTGAGTCTCGGG+GGG - chr3_4:74489542-74489561 None:intergenic 55.0%
CAGTGCTTTCTGAGTCTCGG+GGG - chr3_4:74489543-74489562 None:intergenic 55.0%
CCAGTGCTTTCTGAGTCTCG+GGG - chr3_4:74489544-74489563 None:intergenic 55.0%
CCCAGTGCTTTCTGAGTCTC+GGG - chr3_4:74489545-74489564 None:intergenic 55.0%
!! CCCGAGACTCAGAAAGCACT+GGG + chr3_4:74489542-74489561 Msa0521580:CDS 55.0%
! TGTATCGGTGGCTGAGAGTG+TGG + chr3_4:74489777-74489796 Msa0521580:CDS 55.0%
AAGCTGTAGCCCTCAAGCCA+AGG - chr3_4:74490886-74490905 None:intergenic 55.0%
GAGGGCTACAGCTTACACTG+TGG + chr3_4:74490892-74490911 Msa0521580:intron 55.0%
GCTACAGCTTACACTGTGGC+AGG + chr3_4:74490896-74490915 Msa0521580:intron 55.0%
TGTTGTTCCTGCGCAGAGAG+TGG + chr3_4:74491139-74491158 Msa0521580:CDS 55.0%
GGGGCAGACCCATTATAGGA+AGG - chr3_4:74491251-74491270 None:intergenic 55.0%
CGGTTGTGAAGCTGCTGAAG+GGG - chr3_4:74491270-74491289 None:intergenic 55.0%
GCGGTTGTGAAGCTGCTGAA+GGG - chr3_4:74491271-74491290 None:intergenic 55.0%
AGCGGTTGTGAAGCTGCTGA+AGG - chr3_4:74491272-74491291 None:intergenic 55.0%
! CAATGCTTGGCTAGTCGTGC+TGG - chr3_4:74491318-74491337 None:intergenic 55.0%
! CAGCACGACTAGCCAAGCAT+TGG + chr3_4:74491316-74491335 Msa0521580:CDS 55.0%
!! TTTGGGTTGAGGGTCAACGG+GGG - chr3_4:74491401-74491420 None:intergenic 55.0%
CGACTCCCAATGCACTCCTA+CGG + chr3_4:74491864-74491883 Msa0521580:CDS 55.0%
! CATGTGCCGTAGGAGTGCAT+TGG - chr3_4:74491873-74491892 None:intergenic 55.0%
! GAAATTAGGAGACTGGCCGC+CGG - chr3_4:74491924-74491943 None:intergenic 55.0%
! TTAGGGGAGGGGGATTAGTG+TGG - chr3_4:74492218-74492237 None:intergenic 55.0%
!!! TCTGGTCCGTTTTAGGGGAG+GGG - chr3_4:74492229-74492248 None:intergenic 55.0%
!!! GATCTGGTCCGTTTTAGGGG+AGG - chr3_4:74492231-74492250 None:intergenic 55.0%
AAGACGGCGCGAATTTCCCG+AGG + chr3_4:74482991-74483010 Msa0521580:five_prime_UTR 60.0%
GATGAGTGAGGGAACGGACC+CGG - chr3_4:74483097-74483116 None:intergenic 60.0%
GGATCCGATGATCCGAGGAC+TGG + chr3_4:74483791-74483810 Msa0521580:CDS 60.0%
GCCAAAGCTCCCAACTACGG+AGG - chr3_4:74484917-74484936 None:intergenic 60.0%
! CCTAGCTGCTTCCTCTGAGG+TGG - chr3_4:74485627-74485646 None:intergenic 60.0%
CCACCTCAGAGGAAGCAGCT+AGG + chr3_4:74485624-74485643 Msa0521580:CDS 60.0%
CTCCCTAGCTGCTTCCTCTG+AGG - chr3_4:74485630-74485649 None:intergenic 60.0%
! CCCCGAGACTCAGAAAGCAC+TGG + chr3_4:74489541-74489560 Msa0521580:CDS 60.0%
!! GAAAGCACTGGGAGCTGCAC+TGG + chr3_4:74489553-74489572 Msa0521580:CDS 60.0%
GGTTAGGCGTGTCCCCATGT+CGG + chr3_4:74490027-74490046 Msa0521580:intron 60.0%
TGTTCCTGCGCAGAGAGTGG+AGG + chr3_4:74491142-74491161 Msa0521580:CDS 60.0%
TTTGCCTCCACTCTCTGCGC+AGG - chr3_4:74491149-74491168 None:intergenic 60.0%
!!! CTGGTCCGTTTTAGGGGAGG+GGG - chr3_4:74492228-74492247 None:intergenic 60.0%
GGTGCAGGAGCCATAGCCAC+TGG - chr3_4:74483036-74483055 None:intergenic 65.0%
AGTGAGGGAACGGACCCGGA+CGG - chr3_4:74483093-74483112 None:intergenic 65.0%
! GCTTGCTGGGAGTCGAGCTC+CGG + chr3_4:74483548-74483567 Msa0521580:CDS 65.0%
CTTGCTGGGAGTCGAGCTCC+GGG + chr3_4:74483549-74483568 Msa0521580:CDS 65.0%
!! GGACGAGGAGCATTCTGCCG+AGG + chr3_4:74488463-74488482 Msa0521580:CDS 65.0%
!! GTGTGTCGGGCACCGACATG+GGG - chr3_4:74490042-74490061 None:intergenic 65.0%
!! CGTGTGTCGGGCACCGACAT+GGG - chr3_4:74490043-74490062 None:intergenic 65.0%
!! ACGTGTGTCGGGCACCGACA+TGG - chr3_4:74490044-74490063 None:intergenic 65.0%
AGGGTCAACGGGGGAGGTGA+CGG - chr3_4:74491392-74491411 None:intergenic 65.0%
CCTTCGCCGTCGCAACCGTC+CGG + chr3_4:74483075-74483094 Msa0521580:CDS 70.0%
CTTCGCCGTCGCAACCGTCC+GGG + chr3_4:74483076-74483095 Msa0521580:CDS 70.0%
ACGGACCCGGACGGTTGCGA+CGG - chr3_4:74483084-74483103 None:intergenic 70.0%
ATGGGAACCCCGGAGGAGGG+TGG - chr3_4:74485793-74485812 None:intergenic 70.0%
GGGTTGAGGGTCAACGGGGG+AGG - chr3_4:74491398-74491417 None:intergenic 70.0%
CCGGACGGTTGCGACGGCGA+AGG - chr3_4:74483078-74483097 None:intergenic 75.0%
! CTGGGAGCTGCACTGGCCGC+TGG + chr3_4:74489560-74489579 Msa0521580:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 74482736 74492543 74482736 ID=Msa0521580;Name=Msa0521580
chr3_4 mRNA 74482736 74492543 74482736 ID=Msa0521580-mRNA-1;Parent=Msa0521580;Name=Msa0521580-mRNA-1;_AED=0.06;_eAED=0.06;_QI=306|1|1|1|1|1|11|426|840
chr3_4 exon 74482736 74483097 74482736 ID=Msa0521580-mRNA-1:exon:21065;Parent=Msa0521580-mRNA-1
chr3_4 exon 74483509 74484025 74483509 ID=Msa0521580-mRNA-1:exon:21066;Parent=Msa0521580-mRNA-1
chr3_4 exon 74485572 74485696 74485572 ID=Msa0521580-mRNA-1:exon:21067;Parent=Msa0521580-mRNA-1
chr3_4 exon 74486153 74486351 74486153 ID=Msa0521580-mRNA-1:exon:21068;Parent=Msa0521580-mRNA-1
chr3_4 exon 74487559 74487787 74487559 ID=Msa0521580-mRNA-1:exon:21069;Parent=Msa0521580-mRNA-1
chr3_4 exon 74487946 74488112 74487946 ID=Msa0521580-mRNA-1:exon:21070;Parent=Msa0521580-mRNA-1
chr3_4 exon 74488275 74488484 74488275 ID=Msa0521580-mRNA-1:exon:21071;Parent=Msa0521580-mRNA-1
chr3_4 exon 74489491 74489601 74489491 ID=Msa0521580-mRNA-1:exon:21072;Parent=Msa0521580-mRNA-1
chr3_4 exon 74489730 74489906 74489730 ID=Msa0521580-mRNA-1:exon:21073;Parent=Msa0521580-mRNA-1
chr3_4 exon 74491044 74491484 74491044 ID=Msa0521580-mRNA-1:exon:21074;Parent=Msa0521580-mRNA-1
chr3_4 exon 74491827 74492543 74491827 ID=Msa0521580-mRNA-1:exon:21075;Parent=Msa0521580-mRNA-1
chr3_4 five_prime_UTR 74482736 74483041 74482736 ID=Msa0521580-mRNA-1:five_prime_utr;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74483042 74483097 74483042 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74483509 74484025 74483509 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74485572 74485696 74485572 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74486153 74486351 74486153 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74487559 74487787 74487559 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74487946 74488112 74487946 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74488275 74488484 74488275 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74489491 74489601 74489491 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74489730 74489906 74489730 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74491044 74491484 74491044 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 CDS 74491827 74492117 74491827 ID=Msa0521580-mRNA-1:cds;Parent=Msa0521580-mRNA-1
chr3_4 three_prime_UTR 74492118 74492543 74492118 ID=Msa0521580-mRNA-1:three_prime_utr;Parent=Msa0521580-mRNA-1
Gene Sequence

>Msa0521580

ATGGCTCCTGCACCACCGCAATCTAATCGATCTCCTTCGCCGTCGCAACCGTCCGGGAAGAGTGAAGTATCTGATCTAAAATTACAGCTACGGCAGCTTGCTGGGAGTCGAGCTCCGGGTACTGATGACTCTAAGAGGGATCTTTACAAGAAGGTGATATCAAACATGACTATAGGTATTGATGTTTCGTCTCTCTTTGGTGAGATGGTAATGTGTTCAGCAACATCAGACATTGTTTTGAAGAAAATGTGTTACCTGTATGTTGGAAACTATGCTAAGGTTAATCCGGATCTTGCTCTTTTGACGATTAATTTTCTTCAAAGGGATTGTAAGGATCAGGATCCGATGATCCGAGGACTGGCATTAAGGAGTTTGTGTTCACTTCGAGTGGCGAACTTGGTGGAGTATTTGGTTGGGCCTTTAGGGTCAGGGTTGAAGGATAATAATAGTTATGTCAGGACGGTGGCAGTAATCGGTGTTTTGAAACTGTATCACATATCAGCCTCCACGTGTATTGATGCAGATTTTCCAGAAACGTTGAAGCATTTGATGCTCAATGACCAGGATACTCAGGTAGTTGCAAATTGTTTGTCTGCTTTACAAGAAATTTGGACCTTAGAGTCAACCACCTCAGAGGAAGCAGCTAGGGAGAGAGAAACTCTGCATAGCAAGCCAATTGTTTATTACCTTCTGAATCGCATTAAGGAATTTAGTGAATGGGCACAATGTCTTGTGATGGAATTGGTGGCCAAGTACATTCCATCAGATAACAGTGAAATATTTGATATAATGAATCTCCTTGAAGATAGACTACAGCATGCAAATGGTGCTGTTGTCTTGGCAACTACAAAAGTATTCCTGCACTTGACTTTATCTATGGCTGATGTACATCAGCAGGTATATGAGCGTATCAAAGCCCCTCTCTTAACTCAAGTGAGCTCAGGAAGTCCGGAACAATCTTATGCAATTCTAAGCCACCTGCATCTCTTGGTAATGCGTGCACCATATATATTTTCCTCGGACTACAAACACTTCTATTGCCAGTATAACGAGCCATCATATGTCAAAAAGTTGAAGCTTGAAATGCTGACTGCAGTTGCAAATGAAAGTAACACCTATGAGATAGTGACAGAATTATGTGAATATGCTGCAAATGTTGACATCCCAATTGCAAGGGAATCAATTCGGGCTGTTGGAAAGATAGCATTGCAGCAGTATGATGTCAATGCTATTGTTGATCGGCTTCTGCAGTTTCTGGAGATGGAAAAGGACTATGTTACGTCTGAAGCTCTGGTGCTTGTGAAAGATCTTCTAAGAAAATATCCTCAATGGAGTCAAGATTGTATTGCTGTTGTAGGGAATATCAGTAGCAACAATGTCCAAGAACCTAAGGCTAAGGCAGCTCTCATATGGATGCTGGGGGAATATTCTCAAGACATGCATGATGCTCCGTATGTCTTGGAAAGTCTGGTTGAAAATTGGGACGAGGAGCATTCTGCCGAGGTTCGCTTGCATCTTCTTACTGCAGTAATGAAGTGTTTCTTTAAGAGACCCCCCGAGACTCAGAAAGCACTGGGAGCTGCACTGGCCGCTGGTCTTGCTGATTTTCACCAGGATGTTCATGATAGGGCCTTATTTTATTACAGGCTTCTACAACACAATGTATCGGTGGCTGAGAGTGTGGTGAACCCTCCAAAACAAGCAGTTTCCGTATTTGCTGATACTCAGAGCAGTGAAGTTAAAGATCGCATATTTGATGAATTTAACAGTTTGTCTGTTGTATACCAAAAGCCTTCTTACATGTTCACTGATAAGGAACACCGAGGGACATTTGAGTTTTCAGATGAACTTGGCAATCTGTCTATTAGTGCGGAATCCGGAGATTCTGTTGTTCCTGCGCAGAGAGTGGAGGCAAATGACAAGGATCTGCTTCTAAGTACCACGGAAAAAGATGATGTGAGAGATACTGGAAGCAATGGTTCTGCCTATAATGCTCCTTCCTATAATGGGTCTGCCCCTTCAGCAGCTTCACAACCGCTTGCAGATTTGGCATTTTCAAGTACCAGCACGACTAGCCAAGCATTGGCAATTGATGATCTGCTTGGTTTAGATTTTTCAGTTGGGACTGTAAGCACACCGTCACCTCCCCCGTTGACCCTCAACCCAAAAGCTGTACTGGATCCTGGCACATTTCAGCAGAAATGGCGTCAACTACCAATATCCTTATCAGAGGAATATTCTTTAAGCCCTCTTGCAATTGCATCATTGACGACTCCCAATGCACTCCTACGGCACATGCAAAGTCATTCAATACAGTGCATTGCATCCGGCGGCCAGTCTCCTAATTTCAAGTTCTTTTTCTTTGCTCAAAAAGCAGAAGAAACATCAATATATCTTGTAGAGTGTATAATCAACACATCATCCGCCAAGTCACAGATTAAAATAAAGGCTGATGACCAAAGCTCATCACAGGCATTCTCAACATTATTCCAATCAGCTTTGTCCAAATTTGGTTTGCCCTGA
Protein sequence

>Msa0521580

MAPAPPQSNRSPSPSQPSGKSEVSDLKLQLRQLAGSRAPGTDDSKRDLYKKVISNMTIGIDVSSLFGEMVMCSATSDIVLKKMCYLYVGNYAKVNPDLALLTINFLQRDCKDQDPMIRGLALRSLCSLRVANLVEYLVGPLGSGLKDNNSYVRTVAVIGVLKLYHISASTCIDADFPETLKHLMLNDQDTQVVANCLSALQEIWTLESTTSEEAARERETLHSKPIVYYLLNRIKEFSEWAQCLVMELVAKYIPSDNSEIFDIMNLLEDRLQHANGAVVLATTKVFLHLTLSMADVHQQVYERIKAPLLTQVSSGSPEQSYAILSHLHLLVMRAPYIFSSDYKHFYCQYNEPSYVKKLKLEMLTAVANESNTYEIVTELCEYAANVDIPIARESIRAVGKIALQQYDVNAIVDRLLQFLEMEKDYVTSEALVLVKDLLRKYPQWSQDCIAVVGNISSNNVQEPKAKAALIWMLGEYSQDMHDAPYVLESLVENWDEEHSAEVRLHLLTAVMKCFFKRPPETQKALGAALAAGLADFHQDVHDRALFYYRLLQHNVSVAESVVNPPKQAVSVFADTQSSEVKDRIFDEFNSLSVVYQKPSYMFTDKEHRGTFEFSDELGNLSISAESGDSVVPAQRVEANDKDLLLSTTEKDDVRDTGSNGSAYNAPSYNGSAPSAASQPLADLAFSSTSTTSQALAIDDLLGLDFSVGTVSTPSPPPLTLNPKAVLDPGTFQQKWRQLPISLSEEYSLSPLAIASLTTPNALLRHMQSHSIQCIASGGQSPNFKFFFFAQKAEETSIYLVECIINTSSAKSQIKIKADDQSSSQAFSTLFQSALSKFGLP*