AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1336100


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336100 MtrunA17_Chr1g0208981 97.704 392 4 2 1 388 1 391 0.0 775
Msa1336100 MtrunA17_Chr4g0035951 81.972 355 64 0 34 388 46 400 0.0 613
Msa1336100 MtrunA17_Chr4g0028361 81.690 355 65 0 34 388 46 400 0.0 612
Msa1336100 MtrunA17_Chr4g0035981 81.857 237 43 0 152 388 4 240 2.25e-146 414
Msa1336100 MtrunA17_Chr7g0265821 55.932 354 151 4 39 388 6 358 2.21e-136 394
Msa1336100 MtrunA17_Chr5g0429051 55.085 354 154 4 39 388 6 358 1.22e-134 389
Msa1336100 MtrunA17_Chr5g0447091 55.271 351 153 3 41 388 8 357 6.41e-134 387
Msa1336100 MtrunA17_Chr1g0179211 53.672 354 159 4 39 388 6 358 1.41e-129 376
Msa1336100 MtrunA17_Chr5g0429031 57.561 205 86 1 38 241 46 250 4.28e-78 241
Msa1336100 MtrunA17_Chr4g0035971 76.042 96 23 0 33 128 43 138 7.09e-44 149
Msa1336100 MtrunA17_Chr5g0429021 50.758 132 61 3 260 388 1 131 5.72e-36 128
Msa1336100 MtrunA17_Chr7g0265811 47.253 91 24 1 146 236 22 88 5.18e-20 84.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1336100 AT2G01140.1 84.399 391 58 1 1 388 1 391 0.0 677
Msa1336100 AT4G38970.1 77.807 383 80 2 11 388 16 398 0.0 615
Msa1336100 AT2G21330.1 74.872 390 92 2 5 388 10 399 0.0 603
Msa1336100 AT2G21330.3 72.308 390 92 3 5 388 10 389 0.0 576
Msa1336100 AT4G38970.2 72.727 308 72 3 11 306 16 323 1.24e-160 456
Msa1336100 AT2G21330.2 72.819 298 75 2 5 296 10 307 1.35e-158 448
Msa1336100 AT4G26530.1 56.250 352 149 4 41 388 8 358 2.40e-136 394
Msa1336100 AT4G26530.3 56.250 352 149 4 41 388 8 358 2.40e-136 394
Msa1336100 AT4G26530.2 56.250 352 149 4 41 388 8 358 2.40e-136 394
Msa1336100 AT2G36460.1 55.650 354 152 4 39 388 6 358 3.25e-135 391
Msa1336100 AT3G52930.1 54.802 354 155 4 39 388 6 358 3.70e-133 385
Msa1336100 AT5G03690.2 55.085 354 155 3 39 388 6 359 5.47e-132 383
Msa1336100 AT4G26520.1 54.802 354 155 4 39 388 6 358 1.30e-129 377
Msa1336100 AT4G26520.3 55.172 348 152 3 39 383 6 352 1.44e-129 377
Msa1336100 AT5G03690.1 55.301 349 152 3 44 388 45 393 5.54e-129 376
Msa1336100 AT4G26520.2 54.986 351 153 4 42 388 6 355 1.41e-128 374
Msa1336100 AT4G26520.4 54.986 351 153 4 42 388 6 355 1.41e-128 374
Msa1336100 AT2G36460.3 55.805 267 113 4 126 388 2 267 7.22e-99 295
Msa1336100 AT2G36460.2 55.805 267 113 4 126 388 2 267 7.22e-99 295
Msa1336100 AT5G03690.3 54.682 267 117 3 126 388 1 267 2.86e-94 283
Msa1336100 AT5G03690.4 54.682 267 117 3 126 388 1 267 2.86e-94 283

Find 139 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTATATTTGGCAATGGTTTC+TGG 0.143267 tig0000800:-11678 None:intergenic
TCTTGGTGTAATAGAGGTTT+TGG 0.189042 tig0000800:+12681 Msa1336100:three_prime_UTR
AAGCATGGTTAGTGTATATT+TGG 0.209752 tig0000800:-11691 None:intergenic
CTTGACGAACATTTCCTTCT+TGG 0.217385 tig0000800:-12484 None:intergenic
GGCTGTTAAGGAAGCGGCCT+GGG 0.275057 tig0000800:+10931 Msa1336100:CDS
ACTTCCAGTGTCCTTTCAAT+TGG 0.291399 tig0000800:-11534 None:intergenic
TCCCCATCAAGAAGAATTTC+AGG 0.298792 tig0000800:-11507 None:intergenic
TGAGCTGCTTCAACATTCTC+AGG 0.308014 tig0000800:-12381 None:intergenic
AGGTTAATCGCCAGGCTTAC+AGG 0.321017 tig0000800:+10150 Msa1336100:CDS
AGAATTTCAGGCTCAACTAT+TGG 0.323620 tig0000800:-11495 None:intergenic
TCCTTCTGCCTTGGCTGTTA+AGG 0.340996 tig0000800:+10919 Msa1336100:CDS
CGTGCCATGGGTTGGGACTT+TGG 0.343951 tig0000800:-12299 None:intergenic
GAGGTGTCTCTTGTGGCTTT+TGG 0.347388 tig0000800:+12527 Msa1336100:three_prime_UTR
CGGTAACGGTACCATGATTC+CGG 0.350799 tig0000800:-11739 None:intergenic
TAGGGTTTGGTTCCTCTACC+AGG 0.359285 tig0000800:+10684 Msa1336100:intron
AGCAGCTCAAAAGTCTCTTT+TGG 0.359867 tig0000800:+12395 Msa1336100:CDS
CTTCCAGTGTCCTTTCAATT+GGG 0.368440 tig0000800:-11533 None:intergenic
GGGAAGCGTTTGGCATCAAT+TGG 0.374360 tig0000800:+10113 Msa1336100:CDS
TGAGCAAAATTCCCTCAAAA+AGG 0.378619 tig0000800:-11608 None:intergenic
TCCAAGTGGTCCTTCTGCCT+TGG 0.383226 tig0000800:+10910 Msa1336100:CDS
CTTTCTTTGTGCTCAGCACC+AGG 0.384320 tig0000800:-11648 None:intergenic
GAGCCTGAAATTCTTCTTGA+TGG 0.387798 tig0000800:+11504 Msa1336100:CDS
TAGCAATCATGATATGTAAC+TGG 0.393007 tig0000800:-12782 None:intergenic
AAAGAGAAAGAGAAAGAGAA+AGG 0.395413 tig0000800:-9462 None:intergenic
TCTTAAGCACGGTGTTCTGC+AGG 0.420043 tig0000800:-12344 None:intergenic
CATCAGTTGTCGATTGGTAA+AGG 0.422192 tig0000800:-10238 None:intergenic
ATCAGTTGTCGATTGGTAAA+GGG 0.422744 tig0000800:-10237 None:intergenic
GTGCCAAGGTTTGGATGGAT+TGG 0.426272 tig0000800:+10725 Msa1336100:CDS
TCTCGTTCACTCCGTCTAAA+CGG 0.427424 tig0000800:-9419 None:intergenic
TGAATCTTGGTGCCAAGGTT+TGG 0.428814 tig0000800:+10716 Msa1336100:CDS
TATTAAGTCTCCCAACATAA+GGG 0.432202 tig0000800:-12745 None:intergenic
TGCAACCGCTGGGAAGCGTT+TGG 0.446908 tig0000800:+10103 Msa1336100:CDS
CTGAGCCAAGGAGTTAGCTT+TGG 0.448199 tig0000800:-12424 None:intergenic
AGCCTGAAATTCTTCTTGAT+GGG 0.449367 tig0000800:+11505 Msa1336100:CDS
GTCAGGTGGACAATCAGAAA+TGG 0.452090 tig0000800:+12248 Msa1336100:CDS
ACCTTGTCAACTTTGATGCC+AGG 0.456026 tig0000800:-10302 None:intergenic
TGGCTGTTAAGGAAGCGGCC+TGG 0.457338 tig0000800:+10930 Msa1336100:CDS
ACCATGATTCCGGGGACTGC+AGG 0.458254 tig0000800:-11729 None:intergenic
AAAGACACGTGCCATGGGTT+GGG 0.469437 tig0000800:-12306 None:intergenic
GTATTAAGTCTCCCAACATA+AGG 0.470893 tig0000800:-12746 None:intergenic
AAGAGAAAGAGAAAGAGAAA+GGG 0.473561 tig0000800:-9461 None:intergenic
GCGTTTGGCATCAATTGGAT+TGG 0.476960 tig0000800:+10118 Msa1336100:CDS
CCAGTGTCCTTTCAATTGGG+TGG 0.480272 tig0000800:-11530 None:intergenic
GACTTCGGACCATACCTTCT+CGG 0.480537 tig0000800:-11559 None:intergenic
CTGGTGCTGAGCACAAAGAA+AGG 0.481067 tig0000800:+11649 Msa1336100:CDS
AAGGATTGTTAGCGATCCAT+TGG 0.481219 tig0000800:-9628 None:intergenic
GCAAAAGTTGCCTGTAAGCC+TGG 0.485518 tig0000800:-10160 None:intergenic
TTGCTCACCACACCCGGTCT+AGG 0.485709 tig0000800:+10179 Msa1336100:CDS
GATGAATCAAATGCAACCGC+TGG 0.489723 tig0000800:+10092 Msa1336100:CDS
TCCTGCAGTCCCCGGAATCA+TGG 0.494010 tig0000800:+11728 Msa1336100:CDS
CAGGGTCAAACAATGAATCT+TGG 0.494941 tig0000800:+10703 Msa1336100:CDS
TGGAAGTTGCCGAGAAGGTA+TGG 0.496479 tig0000800:+11550 Msa1336100:CDS
TCTGTTGCATCTCGTGGTCG+TGG 0.498134 tig0000800:+10056 Msa1336100:CDS
TCATTGTTTGACCCTGGTAG+AGG 0.501439 tig0000800:-10696 None:intergenic
CTTTACCAATCGACAACTGA+TGG 0.504053 tig0000800:+10239 Msa1336100:CDS
AACAATGAATCTTGGTGCCA+AGG 0.506764 tig0000800:+10711 Msa1336100:CDS
AGAAGTTGAGGTGTCTCTTG+TGG 0.510767 tig0000800:+12520 Msa1336100:exon
AGAGATGTATTCACCTAGAC+CGG 0.511873 tig0000800:-10192 None:intergenic
TCTTCCCATCAGTTGTCGAT+TGG 0.513936 tig0000800:-10244 None:intergenic
TATGTTGGGAGACTTAATAC+TGG 0.515330 tig0000800:+12749 Msa1336100:three_prime_UTR
GAGACACCTCAACTTCTAGT+AGG 0.519596 tig0000800:-12514 None:intergenic
GGTAACGGTACCATGATTCC+GGG 0.519907 tig0000800:-11738 None:intergenic
GCTAACTCCTTGGCTCAGCT+TGG 0.521549 tig0000800:+12429 Msa1336100:CDS
ACGATATGCTGCTATCTCTC+AGG 0.522411 tig0000800:+10961 Msa1336100:CDS
CCGTGCCAAAGCTAACTCCT+TGG 0.523174 tig0000800:+12419 Msa1336100:CDS
TCTTGGTGCCAAGGTTTGGA+TGG 0.523779 tig0000800:+10720 Msa1336100:CDS
AACTGATGGGAAGAAGTTTG+TGG 0.525618 tig0000800:+10253 Msa1336100:CDS
TGCCTTGGCTGTTAAGGAAG+CGG 0.526397 tig0000800:+10925 Msa1336100:CDS
GGTTAGTGTATATTTGGCAA+TGG 0.529594 tig0000800:-11685 None:intergenic
CAATACTGAGGTTAATCGCC+AGG 0.530082 tig0000800:+10142 Msa1336100:CDS
ATTAAGTCTCCCAACATAAG+GGG 0.532723 tig0000800:-12744 None:intergenic
AGCATATCGTGCAAGTCCCC+AGG 0.533205 tig0000800:-10948 None:intergenic
CGAAAATGAAGAAGCCAAGA+AGG 0.534786 tig0000800:+12470 Msa1336100:CDS
GAGCTGCTTCAACATTCTCA+GGG 0.535757 tig0000800:-12380 None:intergenic
AGGATTGTTAGCGATCCATT+GGG 0.536120 tig0000800:-9627 None:intergenic
TGGTGCTGAGCACAAAGAAA+GGG 0.536459 tig0000800:+11650 Msa1336100:CDS
GCACCAGGTGTAACCATGCT+AGG 0.538660 tig0000800:-11633 None:intergenic
GAAAGACACGTGCCATGGGT+TGG 0.541533 tig0000800:-12307 None:intergenic
GGTCTAGGTGAATACATCTC+TGG 0.541967 tig0000800:+10194 Msa1336100:CDS
GCCTGAAATTCTTCTTGATG+GGG 0.544178 tig0000800:+11506 Msa1336100:CDS
GCCAAGGCAGAAGGACCACT+TGG 0.544206 tig0000800:-10911 None:intergenic
AGAGTTCCTCCTGCAGTCCC+CGG 0.546179 tig0000800:+11720 Msa1336100:CDS
GACACTGGAAGTTGCCGAGA+AGG 0.547027 tig0000800:+11545 Msa1336100:CDS
GGCCGCTTCCTTAACAGCCA+AGG 0.548119 tig0000800:-10927 None:intergenic
CGTGAGGAGAACATTGTACC+TGG 0.549941 tig0000800:+10284 Msa1336100:CDS
TGTACTACCAACCGTTTAGA+CGG 0.552475 tig0000800:+9408 Msa1336100:five_prime_UTR
ATGGGGACCACCCAATTGAA+AGG 0.554643 tig0000800:+11523 Msa1336100:CDS
ACAAAACAAACACACACACG+AGG 0.556224 tig0000800:+9523 Msa1336100:five_prime_UTR
CCTTTCTCTTCTCGTCGTGG+TGG 0.562624 tig0000800:+9647 Msa1336100:CDS
CCACCACGACGAGAAGAGAA+AGG 0.565487 tig0000800:-9647 None:intergenic
AGGGTTTGGTTCCTCTACCA+GGG 0.568089 tig0000800:+10685 Msa1336100:intron
GTATTCACCTAGACCGGGTG+TGG 0.569507 tig0000800:-10186 None:intergenic
GTATCTTCCAAGCTGAGCCA+AGG 0.572003 tig0000800:-12436 None:intergenic
AGCGGTTTGAACAAGTTCAT+CGG 0.573532 tig0000800:-9720 None:intergenic
TCCTTAACAGCCAAGGCAGA+AGG 0.573737 tig0000800:-10920 None:intergenic
GAGTAAGAAGAAGCGCGGAT+CGG 0.575235 tig0000800:-9698 None:intergenic
TCAACTCTCTCTCTTCCCAA+TGG 0.579450 tig0000800:+9612 Msa1336100:CDS
TGTGTTCCATTGCAGGACAA+CGG 0.583080 tig0000800:+11465 Msa1336100:intron
TATGAGAAAGACACGTGCCA+TGG 0.584679 tig0000800:-12312 None:intergenic
AGGAACTCTTCTGTTAAGCA+TGG 0.585388 tig0000800:-11706 None:intergenic
ATGAGAAAGACACGTGCCAT+GGG 0.586561 tig0000800:-12311 None:intergenic
TAGAAATCTGTTGCATCTCG+TGG 0.588123 tig0000800:+10050 Msa1336100:intron
CAGGCTCAACTATTGGAACA+AGG 0.589394 tig0000800:-11488 None:intergenic
CAAAACAAACACACACACGA+GGG 0.590959 tig0000800:+9524 Msa1336100:five_prime_UTR
CAAGATTCATTGTTTGACCC+TGG 0.591933 tig0000800:-10702 None:intergenic
AAGCCAATCCATCCAAACCT+TGG 0.594762 tig0000800:-10728 None:intergenic
ATGAATCAAATGCAACCGCT+GGG 0.595807 tig0000800:+10093 Msa1336100:CDS
CTTAAGCACGGTGTTCTGCA+GGG 0.596190 tig0000800:-12343 None:intergenic
ACTATACCTACTAGAAGTTG+AGG 0.596744 tig0000800:+12508 Msa1336100:exon
GCTGTTAAGGAAGCGGCCTG+GGG 0.602168 tig0000800:+10932 Msa1336100:CDS
GTTCACTCCGTCTAAACGGT+TGG 0.607526 tig0000800:-9415 None:intergenic
AAGCCTAGCATGGTTACACC+TGG 0.607681 tig0000800:+11630 Msa1336100:CDS
CCAAGGAGTTAGCTTTGGCA+CGG 0.608922 tig0000800:-12419 None:intergenic
ACCGTGCTTAAGACATGGCA+AGG 0.609667 tig0000800:+12354 Msa1336100:CDS
ACCTTGCCATGTCTTAAGCA+CGG 0.614625 tig0000800:-12355 None:intergenic
CGGAAGAGAGACGTTGCGAG+TGG 0.615100 tig0000800:-9678 None:intergenic
TTTACCAATCGACAACTGAT+GGG 0.617461 tig0000800:+10240 Msa1336100:CDS
AATCCTTTCTCTTCTCGTCG+TGG 0.618650 tig0000800:+9644 Msa1336100:CDS
CCACCCAATTGAAAGGACAC+TGG 0.623497 tig0000800:+11530 Msa1336100:CDS
CAGGTACAATGTTCTCCTCA+CGG 0.624895 tig0000800:-10283 None:intergenic
CTTGGAAGATACTCTGCCGA+GGG 0.626594 tig0000800:+12447 Msa1336100:CDS
CAAGAAGGAAATGTTCGTCA+AGG 0.630500 tig0000800:+12485 Msa1336100:CDS
ATGATTCCGGGGACTGCAGG+AGG 0.636274 tig0000800:-11726 None:intergenic
GCTTGGAAGATACTCTGCCG+AGG 0.639009 tig0000800:+12446 Msa1336100:CDS
TGAACCAAAGTCCCAACCCA+TGG 0.639076 tig0000800:+12295 Msa1336100:CDS
GGCCAAATAAAAGAAGACTT+CGG 0.642870 tig0000800:-11574 None:intergenic
ACCTGGCATCAAAGTTGACA+AGG 0.646079 tig0000800:+10301 Msa1336100:CDS
TCTGCTGAATACTACAAGCA+AGG 0.650843 tig0000800:+10756 Msa1336100:CDS
ACCGTTGTCAGCATTCCAAG+TGG 0.664978 tig0000800:+10896 Msa1336100:CDS
AATTGGATTGGACAATACTG+AGG 0.667179 tig0000800:+10130 Msa1336100:CDS
TTAAGTCTCCCAACATAAGG+GGG 0.668803 tig0000800:-12743 None:intergenic
ACCACTTGGAATGCTGACAA+CGG 0.673812 tig0000800:-10897 None:intergenic
GAGATGTATTCACCTAGACC+GGG 0.674915 tig0000800:-10191 None:intergenic
AAGGTGCTCGATTTGCCAAG+TGG 0.677907 tig0000800:+10775 Msa1336100:CDS
AGAACACCGTGCTTAAGACA+TGG 0.678756 tig0000800:+12349 Msa1336100:CDS
GTAACGGTACCATGATTCCG+GGG 0.691074 tig0000800:-11737 None:intergenic
GTTTGTGGATTGTCTCCGTG+AGG 0.692026 tig0000800:+10268 Msa1336100:CDS
CATCGGAGTAAGAAGAAGCG+CGG 0.699829 tig0000800:-9703 None:intergenic
TGATGCCAAACGCTTCCCAG+CGG 0.710626 tig0000800:-10108 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTAAAAGTAATGAAAAA+GGG - tig0000800:9781-9800 None:intergenic 10.0%
!! GAATTTAAAAGTAATGAAAA+AGG - tig0000800:9782-9801 None:intergenic 15.0%
!!! TTCTTATATTGATCTTTTTT+TGG + tig0000800:11434-11453 Msa1336100:intron 15.0%
!!! ATGATTGCTATATATTTTTT+TGG + tig0000800:12795-12814 Msa1336100:three_prime_UTR 15.0%
!!! TGATTGCTATATATTTTTTT+GGG + tig0000800:12796-12815 Msa1336100:three_prime_UTR 15.0%
!! AATAAATGTGATCGAAATAA+AGG - tig0000800:9753-9772 None:intergenic 20.0%
!!! AAAGTTTTAATCTTTTCTGT+TGG + tig0000800:9809-9828 Msa1336100:intron 20.0%
!!! AAGTTTTAATCTTTTCTGTT+GGG + tig0000800:9810-9829 Msa1336100:intron 20.0%
!!! TTCCAATTAGAATGTTTTAT+CGG - tig0000800:9927-9946 None:intergenic 20.0%
!!! TTTTATCCTTTTTTCTTTGT+AGG + tig0000800:10665-10684 Msa1336100:intron 20.0%
!!! TTTATCCTTTTTTCTTTGTA+GGG + tig0000800:10666-10685 Msa1336100:intron 20.0%
!! ACATTGAAATTGAATTGAAA+TGG + tig0000800:10846-10865 Msa1336100:intron 20.0%
!!! ATATGTAATGAACCTTTTAT+TGG + tig0000800:11209-11228 Msa1336100:intron 20.0%
!! TTATGTAAATCAGAAACTAA+AGG - tig0000800:11772-11791 None:intergenic 20.0%
!!! AGAAAAAAAAAGACTTTTCT+TGG + tig0000800:12664-12683 Msa1336100:three_prime_UTR 20.0%
!! AGAATGTTTTATCGGAAAAT+TGG - tig0000800:9919-9938 None:intergenic 25.0%
! TTCCGATAAAACATTCTAAT+TGG + tig0000800:9922-9941 Msa1336100:intron 25.0%
! TTGAAATTGAATTGAAATGG+TGG + tig0000800:10849-10868 Msa1336100:intron 25.0%
! TTTCAACAAACAAACATTCA+TGG - tig0000800:10999-11018 None:intergenic 25.0%
!! TGTAAGTTGAAAATGTGTAT+AGG + tig0000800:11149-11168 Msa1336100:intron 25.0%
! TATAGGTTGTGAAATTTGAT+TGG + tig0000800:11166-11185 Msa1336100:intron 25.0%
! TTTAGTATTTATTGCAAGCA+AGG + tig0000800:11269-11288 Msa1336100:intron 25.0%
! CATCATTAGATTAATCTGAT+TGG + tig0000800:11328-11347 Msa1336100:intron 25.0%
! AAAGATCAATATAAGAACAC+TGG - tig0000800:11431-11450 None:intergenic 25.0%
! ACGTATAGTTAACTTTGATA+TGG - tig0000800:11847-11866 None:intergenic 25.0%
! TGTCACATATGTATATATCA+AGG - tig0000800:11974-11993 None:intergenic 25.0%
! TGTTTAAAGATTCTGAATTC+AGG - tig0000800:12040-12059 None:intergenic 25.0%
!! CTCAATATCAGTGAATTTTA+AGG + tig0000800:12573-12592 Msa1336100:three_prime_UTR 25.0%
!!! GAAAGGGTTTTGTTTTGTTT+TGG - tig0000800:9448-9467 None:intergenic 30.0%
AAGAGAAAGAGAAAGAGAAA+GGG - tig0000800:9464-9483 None:intergenic 30.0%
AAAGAGAAAGAGAAAGAGAA+AGG - tig0000800:9465-9484 None:intergenic 30.0%
!!! TTGTTTTGTTTGACAAACGT+TGG - tig0000800:9512-9531 None:intergenic 30.0%
ATTGCGTTCGTTAGTAATAT+AGG + tig0000800:10331-10350 Msa1336100:intron 30.0%
TCGTTAGTAATATAGGATCA+AGG + tig0000800:10338-10357 Msa1336100:intron 30.0%
!! AGTCATAACTTGTTGTGATT+TGG + tig0000800:10541-10560 Msa1336100:intron 30.0%
!!! GGTTTGCTTTTGAAATATAC+AGG + tig0000800:10870-10889 Msa1336100:intron 30.0%
AATAACTGGTGTACTTTCAT+GGG + tig0000800:11034-11053 Msa1336100:intron 30.0%
! TACTTTCATGGGTTATTCTT+TGG + tig0000800:11045-11064 Msa1336100:intron 30.0%
CAATGTGCTTAAATATCTAC+TGG - tig0000800:11131-11150 None:intergenic 30.0%
! GTAATGAACCTTTTATTGGT+TGG + tig0000800:11213-11232 Msa1336100:intron 30.0%
TAATGATGTTACAAAGCAAG+AGG - tig0000800:11316-11335 None:intergenic 30.0%
AAGCATGGTTAGTGTATATT+TGG - tig0000800:11694-11713 None:intergenic 30.0%
TAAATCAGAAACTAAAGGTG+AGG - tig0000800:11767-11786 None:intergenic 30.0%
CACAACAGAATATATGCAAT+TGG - tig0000800:12072-12091 None:intergenic 30.0%
TTGGGATACCTAAAAATCAA+AGG + tig0000800:12700-12719 Msa1336100:three_prime_UTR 30.0%
TGGGATACCTAAAAATCAAA+GGG + tig0000800:12701-12720 Msa1336100:three_prime_UTR 30.0%
!! GTGAATTCCCTTTGATTTTT+AGG - tig0000800:12711-12730 None:intergenic 30.0%
TATTAAGTCTCCCAACATAA+GGG - tig0000800:12748-12767 None:intergenic 30.0%
TAGCAATCATGATATGTAAC+TGG - tig0000800:12785-12804 None:intergenic 30.0%
! AATTTTCATCACTTCACCCA+TGG + tig0000800:9577-9596 Msa1336100:exon 35.0%
CGAAATAAAGGTAGTTACAG+CGG - tig0000800:9741-9760 None:intergenic 35.0%
! AATTGGATTGGACAATACTG+AGG + tig0000800:10130-10149 Msa1336100:CDS 35.0%
! ATCAGTTGTCGATTGGTAAA+GGG - tig0000800:10240-10259 None:intergenic 35.0%
TTTACCAATCGACAACTGAT+GGG + tig0000800:10240-10259 Msa1336100:CDS 35.0%
TTTCCATAAGCTCTTCAAGA+TGG - tig0000800:10504-10523 None:intergenic 35.0%
CCAAACCCTACAAAGAAAAA+AGG - tig0000800:10674-10693 None:intergenic 35.0%
!!! CCTTTTTTCTTTGTAGGGTT+TGG + tig0000800:10671-10690 Msa1336100:intron 35.0%
AACAAACATTCATGGAATGC+AGG - tig0000800:10991-11010 None:intergenic 35.0%
! GTTTGTTGAAATAAGCTCGT+CGG + tig0000800:11008-11027 Msa1336100:intron 35.0%
GAATAACTGGTGTACTTTCA+TGG + tig0000800:11033-11052 Msa1336100:intron 35.0%
!! CATTTGCTGTGTGTTTAGTT+TGG + tig0000800:11092-11111 Msa1336100:intron 35.0%
GTCAAGAACCAACCAATAAA+AGG - tig0000800:11224-11243 None:intergenic 35.0%
AGAATTTCAGGCTCAACTAT+TGG - tig0000800:11498-11517 None:intergenic 35.0%
AGCCTGAAATTCTTCTTGAT+GGG + tig0000800:11505-11524 Msa1336100:CDS 35.0%
! GTCCGAAGTCTTCTTTTATT+TGG + tig0000800:11572-11591 Msa1336100:CDS 35.0%
GGCCAAATAAAAGAAGACTT+CGG - tig0000800:11577-11596 None:intergenic 35.0%
CTCAAAAAGGACATTGTTCT+GGG - tig0000800:11598-11617 None:intergenic 35.0%
! CAGAACAATGTCCTTTTTGA+GGG + tig0000800:11597-11616 Msa1336100:CDS 35.0%
TGAGCAAAATTCCCTCAAAA+AGG - tig0000800:11611-11630 None:intergenic 35.0%
GTATATTTGGCAATGGTTTC+TGG - tig0000800:11681-11700 None:intergenic 35.0%
GGTTAGTGTATATTTGGCAA+TGG - tig0000800:11688-11707 None:intergenic 35.0%
GTTAACTATACGTGTGACTT+CGG + tig0000800:11854-11873 Msa1336100:intron 35.0%
TGTGACTTCGGAAATAACTA+CGG + tig0000800:11866-11885 Msa1336100:intron 35.0%
GTTCTTGATCGTAGGTAATT+TGG + tig0000800:12091-12110 Msa1336100:intron 35.0%
TTGATCGTAGGTAATTTGGA+TGG + tig0000800:12095-12114 Msa1336100:intron 35.0%
! TCGTATTCTCAGTTTTTGTC+AGG + tig0000800:12231-12250 Msa1336100:intron 35.0%
! TATTCTCAGTTTTTGTCAGG+TGG + tig0000800:12234-12253 Msa1336100:intron 35.0%
ACTATACCTACTAGAAGTTG+AGG + tig0000800:12508-12527 Msa1336100:exon 35.0%
!! GACTTTTCTTGGTGTAATAG+AGG + tig0000800:12675-12694 Msa1336100:three_prime_UTR 35.0%
!! TCTTGGTGTAATAGAGGTTT+TGG + tig0000800:12681-12700 Msa1336100:three_prime_UTR 35.0%
!! CTTGGTGTAATAGAGGTTTT+GGG + tig0000800:12682-12701 Msa1336100:three_prime_UTR 35.0%
ATTAAGTCTCCCAACATAAG+GGG - tig0000800:12747-12766 None:intergenic 35.0%
GTATTAAGTCTCCCAACATA+AGG - tig0000800:12749-12768 None:intergenic 35.0%
TATGTTGGGAGACTTAATAC+TGG + tig0000800:12749-12768 Msa1336100:three_prime_UTR 35.0%
TGTACTACCAACCGTTTAGA+CGG + tig0000800:9408-9427 Msa1336100:five_prime_UTR 40.0%
ACAAAACAAACACACACACG+AGG + tig0000800:9523-9542 Msa1336100:five_prime_UTR 40.0%
CAAAACAAACACACACACGA+GGG + tig0000800:9524-9543 Msa1336100:five_prime_UTR 40.0%
! TTGAGTTTTGCAGAAGCCAT+GGG - tig0000800:9596-9615 None:intergenic 40.0%
AGGATTGTTAGCGATCCATT+GGG - tig0000800:9630-9649 None:intergenic 40.0%
AAGGATTGTTAGCGATCCAT+TGG - tig0000800:9631-9650 None:intergenic 40.0%
AGCGGTTTGAACAAGTTCAT+CGG - tig0000800:9723-9742 None:intergenic 40.0%
TAGAAATCTGTTGCATCTCG+TGG + tig0000800:10050-10069 Msa1336100:intron 40.0%
ATGAATCAAATGCAACCGCT+GGG + tig0000800:10093-10112 Msa1336100:CDS 40.0%
AGAGATGTATTCACCTAGAC+CGG - tig0000800:10195-10214 None:intergenic 40.0%
! CATCAGTTGTCGATTGGTAA+AGG - tig0000800:10241-10260 None:intergenic 40.0%
CTTTACCAATCGACAACTGA+TGG + tig0000800:10239-10258 Msa1336100:CDS 40.0%
AACTGATGGGAAGAAGTTTG+TGG + tig0000800:10253-10272 Msa1336100:CDS 40.0%
TATAGGATCAAGGCTCTGTT+TGG + tig0000800:10348-10367 Msa1336100:intron 40.0%
AAGCCATCTTGAAGAGCTTA+TGG + tig0000800:10498-10517 Msa1336100:intron 40.0%
TCTAACAAGCCAATCCAAAC+AGG + tig0000800:10579-10598 Msa1336100:intron 40.0%
! GTTGGTTGATCATAACTTGC+TGG + tig0000800:10633-10652 Msa1336100:intron 40.0%
CAAGATTCATTGTTTGACCC+TGG - tig0000800:10705-10724 None:intergenic 40.0%
CAGGGTCAAACAATGAATCT+TGG + tig0000800:10703-10722 Msa1336100:CDS 40.0%
!! AACAATGAATCTTGGTGCCA+AGG + tig0000800:10711-10730 Msa1336100:CDS 40.0%
TCTGCTGAATACTACAAGCA+AGG + tig0000800:10756-10775 Msa1336100:CDS 40.0%
ACCAAGAATAGCTTACCACT+TGG - tig0000800:10793-10812 None:intergenic 40.0%
GAAAGAATACCCCTGTAAGA+CGG - tig0000800:11073-11092 None:intergenic 40.0%
GAGCCTGAAATTCTTCTTGA+TGG + tig0000800:11504-11523 Msa1336100:CDS 40.0%
GCCTGAAATTCTTCTTGATG+GGG + tig0000800:11506-11525 Msa1336100:CDS 40.0%
TCCCCATCAAGAAGAATTTC+AGG - tig0000800:11510-11529 None:intergenic 40.0%
CTTCCAGTGTCCTTTCAATT+GGG - tig0000800:11536-11555 None:intergenic 40.0%
ACTTCCAGTGTCCTTTCAAT+TGG - tig0000800:11537-11556 None:intergenic 40.0%
CCTCAAAAAGGACATTGTTC+TGG - tig0000800:11599-11618 None:intergenic 40.0%
! CCAGAACAATGTCCTTTTTG+AGG + tig0000800:11596-11615 Msa1336100:CDS 40.0%
! AATTTTGCTCAAGCCTAGCA+TGG + tig0000800:11620-11639 Msa1336100:CDS 40.0%
AGGAACTCTTCTGTTAAGCA+TGG - tig0000800:11709-11728 None:intergenic 40.0%
TCTGTTGTGTTCTTGATCGT+AGG + tig0000800:12083-12102 Msa1336100:intron 40.0%
! AGCAGCTCAAAAGTCTCTTT+TGG + tig0000800:12395-12414 Msa1336100:CDS 40.0%
CGAAAATGAAGAAGCCAAGA+AGG + tig0000800:12470-12489 Msa1336100:CDS 40.0%
CTTGACGAACATTTCCTTCT+TGG - tig0000800:12487-12506 None:intergenic 40.0%
CAAGAAGGAAATGTTCGTCA+AGG + tig0000800:12485-12504 Msa1336100:CDS 40.0%
TTAAGTCTCCCAACATAAGG+GGG - tig0000800:12746-12765 None:intergenic 40.0%
TCTCGTTCACTCCGTCTAAA+CGG - tig0000800:9422-9441 None:intergenic 45.0%
! GTTGAGTTTTGCAGAAGCCA+TGG - tig0000800:9597-9616 None:intergenic 45.0%
TCAACTCTCTCTCTTCCCAA+TGG + tig0000800:9612-9631 Msa1336100:CDS 45.0%
AATCCTTTCTCTTCTCGTCG+TGG + tig0000800:9644-9663 Msa1336100:CDS 45.0%
GATGAATCAAATGCAACCGC+TGG + tig0000800:10092-10111 Msa1336100:CDS 45.0%
GCGTTTGGCATCAATTGGAT+TGG + tig0000800:10118-10137 Msa1336100:CDS 45.0%
CAATACTGAGGTTAATCGCC+AGG + tig0000800:10142-10161 Msa1336100:CDS 45.0%
GAGATGTATTCACCTAGACC+GGG - tig0000800:10194-10213 None:intergenic 45.0%
GGTCTAGGTGAATACATCTC+TGG + tig0000800:10194-10213 Msa1336100:CDS 45.0%
TCTTCCCATCAGTTGTCGAT+TGG - tig0000800:10247-10266 None:intergenic 45.0%
CAGGTACAATGTTCTCCTCA+CGG - tig0000800:10286-10305 None:intergenic 45.0%
ACCTGGCATCAAAGTTGACA+AGG + tig0000800:10301-10320 Msa1336100:CDS 45.0%
ACCTTGTCAACTTTGATGCC+AGG - tig0000800:10305-10324 None:intergenic 45.0%
GTCTTAGAGCCTGTTTGGAT+TGG - tig0000800:10591-10610 None:intergenic 45.0%
TCACAGTCTTAGAGCCTGTT+TGG - tig0000800:10596-10615 None:intergenic 45.0%
!! CAGGCTCTAAGACTGTGATT+TGG + tig0000800:10598-10617 Msa1336100:intron 45.0%
!! AGACTGTGATTTGGTCTCAG+TGG + tig0000800:10607-10626 Msa1336100:intron 45.0%
!! TGTGATTTGGTCTCAGTGGT+TGG + tig0000800:10611-10630 Msa1336100:intron 45.0%
ATTTGGTCTCAGTGGTTGGT+TGG + tig0000800:10615-10634 Msa1336100:intron 45.0%
TCATTGTTTGACCCTGGTAG+AGG - tig0000800:10699-10718 None:intergenic 45.0%
!! TGAATCTTGGTGCCAAGGTT+TGG + tig0000800:10716-10735 Msa1336100:CDS 45.0%
AAGCCAATCCATCCAAACCT+TGG - tig0000800:10731-10750 None:intergenic 45.0%
GCCAAGTGGTAAGCTATTCT+TGG + tig0000800:10789-10808 Msa1336100:intron 45.0%
ACCACTTGGAATGCTGACAA+CGG - tig0000800:10900-10919 None:intergenic 45.0%
ACGATATGCTGCTATCTCTC+AGG + tig0000800:10961-10980 Msa1336100:CDS 45.0%
AAGCTCGTCGGTAGAATAAC+TGG + tig0000800:11020-11039 Msa1336100:intron 45.0%
!! ATTCTTTGGTGCCGTCTTAC+AGG + tig0000800:11059-11078 Msa1336100:intron 45.0%
!! TTCTTTGGTGCCGTCTTACA+GGG + tig0000800:11060-11079 Msa1336100:intron 45.0%
TGCTCTTTGTGTTCCATTGC+AGG + tig0000800:11458-11477 Msa1336100:intron 45.0%
TGTGTTCCATTGCAGGACAA+CGG + tig0000800:11465-11484 Msa1336100:intron 45.0%
CAGGCTCAACTATTGGAACA+AGG - tig0000800:11491-11510 None:intergenic 45.0%
! TGGTGCTGAGCACAAAGAAA+GGG + tig0000800:11650-11669 Msa1336100:CDS 45.0%
CAGAAACTAAAGGTGAGGTG+CGG - tig0000800:11762-11781 None:intergenic 45.0%
GTCAGGTGGACAATCAGAAA+TGG + tig0000800:12248-12267 Msa1336100:CDS 45.0%
ATGAGAAAGACACGTGCCAT+GGG - tig0000800:12314-12333 None:intergenic 45.0%
TATGAGAAAGACACGTGCCA+TGG - tig0000800:12315-12334 None:intergenic 45.0%
AGAACACCGTGCTTAAGACA+TGG + tig0000800:12349-12368 Msa1336100:CDS 45.0%
ACCTTGCCATGTCTTAAGCA+CGG - tig0000800:12358-12377 None:intergenic 45.0%
GAGCTGCTTCAACATTCTCA+GGG - tig0000800:12383-12402 None:intergenic 45.0%
TGAGCTGCTTCAACATTCTC+AGG - tig0000800:12384-12403 None:intergenic 45.0%
GAGACACCTCAACTTCTAGT+AGG - tig0000800:12517-12536 None:intergenic 45.0%
! AGAAGTTGAGGTGTCTCTTG+TGG + tig0000800:12520-12539 Msa1336100:exon 45.0%
!! TTTTGCTGTCCCCCTTATGT+TGG + tig0000800:12734-12753 Msa1336100:three_prime_UTR 45.0%
! TTTGCTGTCCCCCTTATGTT+GGG + tig0000800:12735-12754 Msa1336100:three_prime_UTR 45.0%
GTTCACTCCGTCTAAACGGT+TGG - tig0000800:9418-9437 None:intergenic 50.0%
! GAGTAAGAAGAAGCGCGGAT+CGG - tig0000800:9701-9720 None:intergenic 50.0%
CATCGGAGTAAGAAGAAGCG+CGG - tig0000800:9706-9725 None:intergenic 50.0%
!! GGGAAGCGTTTGGCATCAAT+TGG + tig0000800:10113-10132 Msa1336100:CDS 50.0%
AGGTTAATCGCCAGGCTTAC+AGG + tig0000800:10150-10169 Msa1336100:CDS 50.0%
GCAAAAGTTGCCTGTAAGCC+TGG - tig0000800:10163-10182 None:intergenic 50.0%
! CAACTTTTGCTCACCACACC+CGG + tig0000800:10173-10192 Msa1336100:CDS 50.0%
! GTTTGTGGATTGTCTCCGTG+AGG + tig0000800:10268-10287 Msa1336100:CDS 50.0%
CGTGAGGAGAACATTGTACC+TGG + tig0000800:10284-10303 Msa1336100:CDS 50.0%
! TAGGGTTTGGTTCCTCTACC+AGG + tig0000800:10684-10703 Msa1336100:intron 50.0%
! AGGGTTTGGTTCCTCTACCA+GGG + tig0000800:10685-10704 Msa1336100:intron 50.0%
!! TCTTGGTGCCAAGGTTTGGA+TGG + tig0000800:10720-10739 Msa1336100:CDS 50.0%
GTGCCAAGGTTTGGATGGAT+TGG + tig0000800:10725-10744 Msa1336100:CDS 50.0%
! AAGGTGCTCGATTTGCCAAG+TGG + tig0000800:10775-10794 Msa1336100:CDS 50.0%
ACCGTTGTCAGCATTCCAAG+TGG + tig0000800:10896-10915 Msa1336100:CDS 50.0%
TCCTTCTGCCTTGGCTGTTA+AGG + tig0000800:10919-10938 Msa1336100:CDS 50.0%
TCCTTAACAGCCAAGGCAGA+AGG - tig0000800:10923-10942 None:intergenic 50.0%
TGCCTTGGCTGTTAAGGAAG+CGG + tig0000800:10925-10944 Msa1336100:CDS 50.0%
!! TCTTTGGTGCCGTCTTACAG+GGG + tig0000800:11061-11080 Msa1336100:intron 50.0%
ATGGGGACCACCCAATTGAA+AGG + tig0000800:11523-11542 Msa1336100:CDS 50.0%
CCAGTGTCCTTTCAATTGGG+TGG - tig0000800:11533-11552 None:intergenic 50.0%
CCACCCAATTGAAAGGACAC+TGG + tig0000800:11530-11549 Msa1336100:CDS 50.0%
TGGAAGTTGCCGAGAAGGTA+TGG + tig0000800:11550-11569 Msa1336100:CDS 50.0%
GACTTCGGACCATACCTTCT+CGG - tig0000800:11562-11581 None:intergenic 50.0%
AAGCCTAGCATGGTTACACC+TGG + tig0000800:11630-11649 Msa1336100:CDS 50.0%
CTTTCTTTGTGCTCAGCACC+AGG - tig0000800:11651-11670 None:intergenic 50.0%
! CTGGTGCTGAGCACAAAGAA+AGG + tig0000800:11649-11668 Msa1336100:CDS 50.0%
GTAACGGTACCATGATTCCG+GGG - tig0000800:11740-11759 None:intergenic 50.0%
! GGTAACGGTACCATGATTCC+GGG - tig0000800:11741-11760 None:intergenic 50.0%
! CGGTAACGGTACCATGATTC+CGG - tig0000800:11742-11761 None:intergenic 50.0%
CTAAAGGTGAGGTGCGGTAA+CGG - tig0000800:11756-11775 None:intergenic 50.0%
TGAACCAAAGTCCCAACCCA+TGG + tig0000800:12295-12314 Msa1336100:CDS 50.0%
AAAGACACGTGCCATGGGTT+GGG - tig0000800:12309-12328 None:intergenic 50.0%
CTTAAGCACGGTGTTCTGCA+GGG - tig0000800:12346-12365 None:intergenic 50.0%
TCTTAAGCACGGTGTTCTGC+AGG - tig0000800:12347-12366 None:intergenic 50.0%
ACCGTGCTTAAGACATGGCA+AGG + tig0000800:12354-12373 Msa1336100:CDS 50.0%
!! CCAAGGAGTTAGCTTTGGCA+CGG - tig0000800:12422-12441 None:intergenic 50.0%
! CTGAGCCAAGGAGTTAGCTT+TGG - tig0000800:12427-12446 None:intergenic 50.0%
GTATCTTCCAAGCTGAGCCA+AGG - tig0000800:12439-12458 None:intergenic 50.0%
CTTGGAAGATACTCTGCCGA+GGG + tig0000800:12447-12466 Msa1336100:CDS 50.0%
! GGCTTCTTCATTTTCGCCCT+CGG - tig0000800:12466-12485 None:intergenic 50.0%
!! GAGGTGTCTCTTGTGGCTTT+TGG + tig0000800:12527-12546 Msa1336100:three_prime_UTR 50.0%
CCACCACGACGAGAAGAGAA+AGG - tig0000800:9650-9669 None:intergenic 55.0%
CCTTTCTCTTCTCGTCGTGG+TGG + tig0000800:9647-9666 Msa1336100:CDS 55.0%
TCTGTTGCATCTCGTGGTCG+TGG + tig0000800:10056-10075 Msa1336100:CDS 55.0%
TGATGCCAAACGCTTCCCAG+CGG - tig0000800:10111-10130 None:intergenic 55.0%
GTATTCACCTAGACCGGGTG+TGG - tig0000800:10189-10208 None:intergenic 55.0%
TCCAAGTGGTCCTTCTGCCT+TGG + tig0000800:10910-10929 Msa1336100:CDS 55.0%
AGCATATCGTGCAAGTCCCC+AGG - tig0000800:10951-10970 None:intergenic 55.0%
ACAAGGCCGTTGTCCTGCAA+TGG - tig0000800:11474-11493 None:intergenic 55.0%
GACACTGGAAGTTGCCGAGA+AGG + tig0000800:11545-11564 Msa1336100:CDS 55.0%
GCACCAGGTGTAACCATGCT+AGG - tig0000800:11636-11655 None:intergenic 55.0%
GAAAGACACGTGCCATGGGT+TGG - tig0000800:12310-12329 None:intergenic 55.0%
CCGTGCCAAAGCTAACTCCT+TGG + tig0000800:12419-12438 Msa1336100:CDS 55.0%
GCTAACTCCTTGGCTCAGCT+TGG + tig0000800:12429-12448 Msa1336100:CDS 55.0%
GCTTGGAAGATACTCTGCCG+AGG + tig0000800:12446-12465 Msa1336100:CDS 55.0%
CGGAAGAGAGACGTTGCGAG+TGG - tig0000800:9681-9700 None:intergenic 60.0%
!! TGCAACCGCTGGGAAGCGTT+TGG + tig0000800:10103-10122 Msa1336100:CDS 60.0%
TTGCTCACCACACCCGGTCT+AGG + tig0000800:10179-10198 Msa1336100:CDS 60.0%
GCCAAGGCAGAAGGACCACT+TGG - tig0000800:10914-10933 None:intergenic 60.0%
GGCCGCTTCCTTAACAGCCA+AGG - tig0000800:10930-10949 None:intergenic 60.0%
TGGCTGTTAAGGAAGCGGCC+TGG + tig0000800:10930-10949 Msa1336100:CDS 60.0%
GGCTGTTAAGGAAGCGGCCT+GGG + tig0000800:10931-10950 Msa1336100:CDS 60.0%
GCTGTTAAGGAAGCGGCCTG+GGG + tig0000800:10932-10951 Msa1336100:CDS 60.0%
AGAGTTCCTCCTGCAGTCCC+CGG + tig0000800:11720-11739 Msa1336100:CDS 60.0%
ATGATTCCGGGGACTGCAGG+AGG - tig0000800:11729-11748 None:intergenic 60.0%
TCCTGCAGTCCCCGGAATCA+TGG + tig0000800:11728-11747 Msa1336100:CDS 60.0%
ACCATGATTCCGGGGACTGC+AGG - tig0000800:11732-11751 None:intergenic 60.0%
!! CGTGCCATGGGTTGGGACTT+TGG - tig0000800:12302-12321 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0000800 gene 9399 12824 9399 ID=Msa1336100;Name=Msa1336100
tig0000800 mRNA 9399 12824 9399 ID=Msa1336100-mRNA-1;Parent=Msa1336100;Name=Msa1336100-mRNA-1;_AED=0.01;_eAED=0.01;_QI=197|1|1|1|1|1|6|303|388
tig0000800 exon 9399 9742 9399 ID=Msa1336100-mRNA-1:exon:561;Parent=Msa1336100-mRNA-1
tig0000800 exon 10053 10322 10053 ID=Msa1336100-mRNA-1:exon:562;Parent=Msa1336100-mRNA-1
tig0000800 exon 10687 10796 10687 ID=Msa1336100-mRNA-1:exon:563;Parent=Msa1336100-mRNA-1
tig0000800 exon 10892 10982 10892 ID=Msa1336100-mRNA-1:exon:564;Parent=Msa1336100-mRNA-1
tig0000800 exon 11480 11749 11480 ID=Msa1336100-mRNA-1:exon:565;Parent=Msa1336100-mRNA-1
tig0000800 exon 12243 12824 12243 ID=Msa1336100-mRNA-1:exon:566;Parent=Msa1336100-mRNA-1
tig0000800 five_prime_UTR 9399 9595 9399 ID=Msa1336100-mRNA-1:five_prime_utr;Parent=Msa1336100-mRNA-1
tig0000800 CDS 9596 9742 9596 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 CDS 10053 10322 10053 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 CDS 10687 10796 10687 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 CDS 10892 10982 10892 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 CDS 11480 11749 11480 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 CDS 12243 12521 12243 ID=Msa1336100-mRNA-1:cds;Parent=Msa1336100-mRNA-1
tig0000800 three_prime_UTR 12522 12824 12522 ID=Msa1336100-mRNA-1:three_prime_utr;Parent=Msa1336100-mRNA-1
Gene Sequence

>Msa1336100

ATGGCTTCTGCAAAACTCAACTCTCTCTCTTCCCAATGGATCGCTAACAATCCTTTCTCTTCTCGTCGTGGTGGATCTTTCTCCACTCGCAACGTCTCTCTTCCGATCCGCGCTTCTTCTTACTCCGATGAACTTGTTCAAACCGCTAAATCTGTTGCATCTCGTGGTCGTGGAATTCTTGCAATTGATGAATCAAATGCAACCGCTGGGAAGCGTTTGGCATCAATTGGATTGGACAATACTGAGGTTAATCGCCAGGCTTACAGGCAACTTTTGCTCACCACACCCGGTCTAGGTGAATACATCTCTGGTGCTATTTTCTTTGAAGAAACCCTTTACCAATCGACAACTGATGGGAAGAAGTTTGTGGATTGTCTCCGTGAGGAGAACATTGTACCTGGCATCAAAGTTGACAAGGGTTTGGTTCCTCTACCAGGGTCAAACAATGAATCTTGGTGCCAAGGTTTGGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCCAAGTGGCGTACCGTTGTCAGCATTCCAAGTGGTCCTTCTGCCTTGGCTGTTAAGGAAGCGGCCTGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAACGGCCTTGTTCCAATAGTTGAGCCTGAAATTCTTCTTGATGGGGACCACCCAATTGAAAGGACACTGGAAGTTGCCGAGAAGGTATGGTCCGAAGTCTTCTTTTATTTGGCCCAGAACAATGTCCTTTTTGAGGGAATTTTGCTCAAGCCTAGCATGGTTACACCTGGTGCTGAGCACAAAGAAAGGGCTTCTCCAGAAACCATTGCCAAATATACACTAACCATGCTTAACAGAAGAGTTCCTCCTGCAGTCCCCGGAATCATGTTTTTGTCAGGTGGACAATCAGAAATGGAAGCAACACTAAATCTTAATGCTATGAACCAAAGTCCCAACCCATGGCACGTGTCTTTCTCATACGCACGAGCCCTGCAGAACACCGTGCTTAAGACATGGCAAGGTCGCCCTGAGAATGTTGAAGCAGCTCAAAAGTCTCTTTTGGTCCGTGCCAAAGCTAACTCCTTGGCTCAGCTTGGAAGATACTCTGCCGAGGGCGAAAATGAAGAAGCCAAGAAGGAAATGTTCGTCAAGGACTATACCTACTAG

Protein sequence

>Msa1336100

MASAKLNSLSSQWIANNPFSSRRGGSFSTRNVSLPIRASSYSDELVQTAKSVASRGRGILAIDESNATAGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAIFFEETLYQSTTDGKKFVDCLREENIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKERASPETIAKYTLTMLNRRVPPAVPGIMFLSGGQSEMEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKKEMFVKDYTY*