Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357100 | XP_039688262.1 | 93.857 | 407 | 25 | 0 | 1 | 407 | 9 | 415 | 0.0 | 807 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357100 | sp|Q9C7Z9|SCP18_ARATH | 46.883 | 401 | 200 | 5 | 20 | 407 | 23 | 423 | 5.28e-123 | 367 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357100 | A0A072UV98 | 93.857 | 407 | 25 | 0 | 1 | 407 | 2 | 408 | 0.0 | 806 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007230 | Msa0357100 | 0.816605 | 5.072543e-52 | -8.615850e-47 |
| Msa0023180 | Msa0357100 | 0.822694 | 2.065804e-53 | -8.615850e-47 |
| Msa0029020 | Msa0357100 | -0.824026 | 1.008731e-53 | -8.615850e-47 |
| Msa0035110 | Msa0357100 | 0.851674 | 7.609601e-61 | -8.615850e-47 |
| Msa0042410 | Msa0357100 | 0.812012 | 5.250876e-51 | -8.615850e-47 |
| Msa0043240 | Msa0357100 | -0.813930 | 1.994271e-51 | -8.615850e-47 |
| Msa0053480 | Msa0357100 | 0.833395 | 5.465500e-56 | -8.615850e-47 |
| Msa0055590 | Msa0357100 | 0.817530 | 3.144111e-52 | -8.615850e-47 |
| Msa0070740 | Msa0357100 | 0.813920 | 2.004796e-51 | -8.615850e-47 |
| Msa0079650 | Msa0357100 | 0.807901 | 4.029727e-50 | -8.615850e-47 |
| Msa0116260 | Msa0357100 | 0.810178 | 1.311263e-50 | -8.615850e-47 |
| Msa0130100 | Msa0357100 | 0.830823 | 2.363376e-55 | -8.615850e-47 |
| Msa0143360 | Msa0357100 | 0.809330 | 1.996306e-50 | -8.615850e-47 |
| Msa0151810 | Msa0357100 | 0.803866 | 2.841259e-49 | -8.615850e-47 |
| Msa0166050 | Msa0357100 | 0.800847 | 1.189292e-48 | -8.615850e-47 |
| Msa0175920 | Msa0357100 | 0.853320 | 2.582950e-61 | -8.615850e-47 |
| Msa0181410 | Msa0357100 | 0.838349 | 3.032295e-57 | -8.615850e-47 |
| Msa0187650 | Msa0357100 | 0.802938 | 4.424205e-49 | -8.615850e-47 |
| Msa0190830 | Msa0357100 | 0.813549 | 2.420020e-51 | -8.615850e-47 |
| Msa0208390 | Msa0357100 | 0.846181 | 2.552789e-59 | -8.615850e-47 |
| Msa0213650 | Msa0357100 | 0.804754 | 1.855662e-49 | -8.615850e-47 |
| Msa0233190 | Msa0357100 | 0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa0251140 | Msa0357100 | 0.826935 | 2.064087e-54 | -8.615850e-47 |
| Msa0269360 | Msa0357100 | 0.824290 | 8.743707e-54 | -8.615850e-47 |
| Msa0272420 | Msa0357100 | 0.801540 | 8.580365e-49 | -8.615850e-47 |
| Msa0275670 | Msa0357100 | 0.806418 | 8.307352e-50 | -8.615850e-47 |
| Msa0286790 | Msa0357100 | 0.803170 | 3.961138e-49 | -8.615850e-47 |
| Msa0303860 | Msa0357100 | -0.817769 | 2.776735e-52 | -8.615850e-47 |
| Msa0304740 | Msa0357100 | 0.870806 | 1.104871e-66 | -8.615850e-47 |
| Msa0311580 | Msa0357100 | 0.817331 | 3.485881e-52 | -8.615850e-47 |
| Msa0311620 | Msa0357100 | 0.819319 | 1.236265e-52 | -8.615850e-47 |
| Msa0319090 | Msa0357100 | 0.802584 | 5.235343e-49 | -8.615850e-47 |
| Msa0331590 | Msa0357100 | 0.862290 | 5.627890e-64 | -8.615850e-47 |
| Msa0340530 | Msa0357100 | 0.805724 | 1.162604e-49 | -8.615850e-47 |
| Msa0357090 | Msa0357100 | 0.965394 | 1.510487e-124 | -8.615850e-47 |
| Msa0357100 | Msa0357210 | 0.833991 | 3.879062e-56 | -8.615850e-47 |
| Msa0357100 | Msa0403340 | 0.902650 | 7.802290e-79 | -8.615850e-47 |
| Msa0357100 | Msa0405250 | -0.807804 | 4.225674e-50 | -8.615850e-47 |
| Msa0357100 | Msa0413740 | 0.817046 | 4.040726e-52 | -8.615850e-47 |
| Msa0357100 | Msa0416800 | 0.840241 | 9.786770e-58 | -8.615850e-47 |
| Msa0357100 | Msa0458790 | 0.813169 | 2.933268e-51 | -8.615850e-47 |
| Msa0357100 | Msa0463460 | 0.805390 | 1.366186e-49 | -8.615850e-47 |
| Msa0357100 | Msa0467560 | 0.800666 | 1.295090e-48 | -8.615850e-47 |
| Msa0357100 | Msa0468050 | -0.802057 | 6.718894e-49 | -8.615850e-47 |
| Msa0357100 | Msa0482870 | 0.816476 | 5.423525e-52 | -8.615850e-47 |
| Msa0357100 | Msa0505390 | 0.816462 | 5.462300e-52 | -8.615850e-47 |
| Msa0357100 | Msa0548720 | 0.802751 | 4.836259e-49 | -8.615850e-47 |
| Msa0357100 | Msa0569290 | 0.836679 | 8.124673e-57 | -8.615850e-47 |
| Msa0357100 | Msa0575250 | 0.806453 | 8.167730e-50 | -8.615850e-47 |
| Msa0357100 | Msa0582110 | 0.810877 | 9.261946e-51 | -8.615850e-47 |
| Msa0357100 | Msa0587060 | 0.802403 | 5.705264e-49 | -8.615850e-47 |
| Msa0357100 | Msa0591780 | 0.805686 | 1.184194e-49 | -8.615850e-47 |
| Msa0357100 | Msa0596100 | 0.807570 | 4.738685e-50 | -8.615850e-47 |
| Msa0357100 | Msa0599250 | 0.810939 | 8.983427e-51 | -8.615850e-47 |
| Msa0357100 | Msa0608170 | 0.864940 | 8.469507e-65 | -8.615850e-47 |
| Msa0357100 | Msa0624730 | 0.802158 | 6.405837e-49 | -8.615850e-47 |
| Msa0357100 | Msa0626890 | 0.815745 | 7.897124e-52 | -8.615850e-47 |
| Msa0357100 | Msa0635470 | 0.810483 | 1.127028e-50 | -8.615850e-47 |
| Msa0357100 | Msa0648090 | 0.880077 | 7.385023e-70 | -8.615850e-47 |
| Msa0357100 | Msa0685880 | 0.801630 | 8.221937e-49 | -8.615850e-47 |
| Msa0357100 | Msa0691020 | 0.842276 | 2.855022e-58 | -8.615850e-47 |
| Msa0357100 | Msa0723140 | 0.805177 | 1.513888e-49 | -8.615850e-47 |
| Msa0357100 | Msa0749900 | 0.804319 | 2.286609e-49 | -8.615850e-47 |
| Msa0357100 | Msa0782970 | 0.816511 | 5.325662e-52 | -8.615850e-47 |
| Msa0357100 | Msa0792170 | 0.811029 | 8.585793e-51 | -8.615850e-47 |
| Msa0357100 | Msa0792510 | 0.832169 | 1.102118e-55 | -8.615850e-47 |
| Msa0357100 | Msa0814780 | 0.833660 | 4.694860e-56 | -8.615850e-47 |
| Msa0357100 | Msa0825620 | 0.804842 | 1.779127e-49 | -8.615850e-47 |
| Msa0357100 | Msa0830120 | 0.814983 | 1.166592e-51 | -8.615850e-47 |
| Msa0357100 | Msa0830450 | 0.812623 | 3.862471e-51 | -8.615850e-47 |
| Msa0357100 | Msa0837990 | 0.823563 | 1.294974e-53 | -8.615850e-47 |
| Msa0357100 | Msa0842050 | 0.806008 | 1.013113e-49 | -8.615850e-47 |
| Msa0357100 | Msa0847390 | 0.818127 | 2.305150e-52 | -8.615850e-47 |
| Msa0357100 | Msa0880080 | 0.812289 | 4.569669e-51 | -8.615850e-47 |
| Msa0357100 | Msa0887000 | 0.831590 | 1.531814e-55 | -8.615850e-47 |
| Msa0357100 | Msa0902980 | 0.815850 | 7.482162e-52 | -8.615850e-47 |
| Msa0357100 | Msa0923820 | 0.809802 | 1.580462e-50 | -8.615850e-47 |
| Msa0357100 | Msa0946120 | 0.861581 | 9.275560e-64 | -8.615850e-47 |
| Msa0357100 | Msa0951720 | 0.812878 | 3.397423e-51 | -8.615850e-47 |
| Msa0357100 | Msa0988500 | 0.808774 | 2.625247e-50 | -8.615850e-47 |
| Msa0357100 | Msa1008340 | 0.809863 | 1.533585e-50 | -8.615850e-47 |
| Msa0357100 | Msa1008490 | 0.822240 | 2.632942e-53 | -8.615850e-47 |
| Msa0357100 | Msa1009020 | 0.839807 | 1.270669e-57 | -8.615850e-47 |
| Msa0357100 | Msa1018720 | 0.830063 | 3.625447e-55 | -8.615850e-47 |
| Msa0357100 | Msa1033440 | -0.814752 | 1.313104e-51 | -8.615850e-47 |
| Msa0357100 | Msa1036390 | 0.825735 | 3.985407e-54 | -8.615850e-47 |
| Msa0357100 | Msa1040120 | 0.816184 | 6.304400e-52 | -8.615850e-47 |
| Msa0357100 | Msa1041620 | 0.812888 | 3.380255e-51 | -8.615850e-47 |
| Msa0357100 | Msa1041770 | 0.809381 | 1.946031e-50 | -8.615850e-47 |
| Msa0357100 | Msa1042380 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa0357100 | Msa1049950 | 0.806407 | 8.349552e-50 | -8.615850e-47 |
| Msa0357100 | Msa1073110 | -0.802896 | 4.512558e-49 | -8.615850e-47 |
| Msa0357100 | Msa1076630 | 0.811445 | 6.977189e-51 | -8.615850e-47 |
| Msa0357100 | Msa1076680 | 0.830023 | 3.708716e-55 | -8.615850e-47 |
| Msa0357100 | Msa1080280 | 0.812559 | 3.989444e-51 | -8.615850e-47 |
| Msa0357100 | Msa1081650 | 0.826204 | 3.083319e-54 | -8.615850e-47 |
| Msa0357100 | Msa1083410 | 0.839878 | 1.217677e-57 | -8.615850e-47 |
| Msa0357100 | Msa1099030 | 0.813558 | 2.409238e-51 | -8.615850e-47 |
| Msa0357100 | Msa1107950 | 0.810188 | 1.305308e-50 | -8.615850e-47 |
| Msa0357100 | Msa1113210 | 0.815812 | 7.631100e-52 | -8.615850e-47 |
| Msa0357100 | Msa1125040 | 0.813141 | 2.974845e-51 | -8.615850e-47 |
| Msa0357100 | Msa1125100 | 0.810131 | 1.342803e-50 | -8.615850e-47 |
| Msa0357100 | Msa1125150 | 0.807019 | 6.199868e-50 | -8.615850e-47 |
| Msa0357100 | Msa1128160 | 0.853336 | 2.555764e-61 | -8.615850e-47 |
| Msa0357100 | Msa1139240 | 0.802954 | 4.391241e-49 | -8.615850e-47 |
| Msa0357100 | Msa1151970 | 0.855838 | 4.822876e-62 | -8.615850e-47 |
| Msa0357100 | Msa1165360 | 0.852599 | 4.152093e-61 | -8.615850e-47 |
| Msa0357100 | Msa1166520 | 0.813433 | 2.566124e-51 | -8.615850e-47 |
| Msa0357100 | Msa1170040 | -0.804498 | 2.098554e-49 | -8.615850e-47 |
| Msa0357100 | Msa1182400 | 0.819240 | 1.288394e-52 | -8.615850e-47 |
| Msa0357100 | Msa1198270 | 0.887387 | 1.492372e-72 | -8.615850e-47 |
| Msa0357100 | Msa1201550 | 0.821120 | 4.779623e-53 | -8.615850e-47 |
| Msa0357100 | Msa1201990 | 0.810787 | 9.689933e-51 | -8.615850e-47 |
| Msa0357100 | Msa1221200 | -0.807010 | 6.229237e-50 | -8.615850e-47 |
| Msa0357100 | Msa1226600 | 0.805609 | 1.229155e-49 | -8.615850e-47 |
| Msa0357100 | Msa1230190 | 0.811097 | 8.302981e-51 | -8.615850e-47 |
| Msa0357100 | Msa1235190 | 0.808209 | 3.465060e-50 | -8.615850e-47 |
| Msa0357100 | Msa1242390 | 0.802426 | 5.642478e-49 | -8.615850e-47 |
| Msa0357100 | Msa1254770 | 0.810905 | 9.134752e-51 | -8.615850e-47 |
| Msa0357100 | Msa1254800 | 0.811024 | 8.610181e-51 | -8.615850e-47 |
| Msa0357100 | Msa1267330 | 0.808648 | 2.793042e-50 | -8.615850e-47 |
| Msa0357100 | Msa1294470 | 0.809130 | 2.202930e-50 | -8.615850e-47 |
| Msa0357100 | Msa1295010 | 0.806161 | 9.410780e-50 | -8.615850e-47 |
| Msa0357100 | Msa1304850 | 0.826778 | 2.250889e-54 | -8.615850e-47 |
| Msa0357100 | Msa1319440 | 0.829791 | 4.224925e-55 | -8.615850e-47 |
| Msa0357100 | Msa1329990 | 0.803097 | 4.102116e-49 | -8.615850e-47 |
| Msa0357100 | Msa1331730 | 0.811100 | 8.287338e-51 | -8.615850e-47 |
| Msa0357100 | Msa1351370 | 0.809765 | 1.609259e-50 | -8.615850e-47 |
| Msa0357100 | Msa1373950 | 0.837146 | 6.172197e-57 | -8.615850e-47 |
| Msa0357100 | Msa1391600 | 0.821164 | 4.668990e-53 | -8.615850e-47 |
| Msa0357100 | Msa1423080 | 0.810558 | 1.085739e-50 | -8.615850e-47 |
| Msa0357100 | Msa1430930 | 0.805910 | 1.062488e-49 | -8.615850e-47 |
| Msa0357100 | Msa1432250 | 0.812265 | 4.624018e-51 | -8.615850e-47 |
| Msa0357100 | Msa1437650 | 0.806228 | 9.106541e-50 | -8.615850e-47 |
| Msa0357100 | Msa1456810 | 0.805501 | 1.295009e-49 | -8.615850e-47 |
| Msa0357100 | Msa1465900 | 0.815320 | 9.822763e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357100 | MtrunA17_Chr3g0093971 | 93.857 | 407 | 25 | 0 | 1 | 407 | 2 | 408 | 0.0 | 806 |
| Msa0357100 | MtrunA17_Chr2g0285351 | 44.498 | 418 | 213 | 5 | 8 | 407 | 11 | 427 | 9.01e-123 | 363 |
| Msa0357100 | MtrunA17_Chr2g0285381 | 45.013 | 391 | 208 | 3 | 23 | 407 | 34 | 423 | 3.51e-121 | 359 |
| Msa0357100 | MtrunA17_Chr2g0285371 | 44.472 | 398 | 207 | 4 | 23 | 407 | 31 | 427 | 4.37e-120 | 357 |
| Msa0357100 | MtrunA17_Chr4g0009681 | 44.059 | 404 | 212 | 8 | 14 | 407 | 26 | 425 | 4.79e-115 | 344 |
| Msa0357100 | MtrunA17_Chr4g0009701 | 42.822 | 404 | 217 | 8 | 14 | 407 | 29 | 428 | 2.22e-112 | 337 |
| Msa0357100 | MtrunA17_Chr3g0133011 | 42.822 | 411 | 216 | 5 | 16 | 407 | 44 | 454 | 3.80e-112 | 337 |
| Msa0357100 | MtrunA17_Chr4g0009711 | 42.892 | 408 | 220 | 7 | 10 | 407 | 24 | 428 | 7.45e-112 | 336 |
| Msa0357100 | MtrunA17_Chr4g0009651 | 41.832 | 404 | 221 | 8 | 14 | 407 | 29 | 428 | 2.96e-109 | 329 |
| Msa0357100 | MtrunA17_Chr4g0009661 | 42.079 | 404 | 220 | 8 | 14 | 407 | 29 | 428 | 7.29e-108 | 325 |
| Msa0357100 | MtrunA17_Chr4g0009671 | 42.784 | 388 | 205 | 8 | 32 | 407 | 11 | 393 | 6.51e-107 | 322 |
| Msa0357100 | MtrunA17_Chr4g0009641 | 38.821 | 407 | 214 | 8 | 10 | 407 | 24 | 404 | 1.01e-94 | 291 |
| Msa0357100 | MtrunA17_Chr4g0009721 | 37.073 | 410 | 198 | 8 | 8 | 407 | 18 | 377 | 1.76e-85 | 266 |
| Msa0357100 | MtrunA17_Chr7g0234051 | 32.143 | 448 | 255 | 7 | 7 | 407 | 8 | 453 | 1.49e-76 | 246 |
| Msa0357100 | MtrunA17_Chr8g0338461 | 32.000 | 450 | 252 | 8 | 7 | 407 | 9 | 453 | 8.23e-76 | 244 |
| Msa0357100 | MtrunA17_Chr7g0249431 | 31.403 | 449 | 257 | 11 | 7 | 407 | 11 | 456 | 3.82e-71 | 231 |
| Msa0357100 | MtrunA17_Chr7g0234041 | 31.207 | 439 | 229 | 11 | 23 | 407 | 24 | 443 | 1.24e-61 | 206 |
| Msa0357100 | MtrunA17_Chr2g0279381 | 36.916 | 214 | 114 | 3 | 209 | 407 | 4 | 211 | 1.99e-44 | 153 |
| Msa0357100 | MtrunA17_Chr3g0094811 | 28.571 | 427 | 258 | 15 | 6 | 407 | 7 | 411 | 1.31e-43 | 157 |
| Msa0357100 | MtrunA17_Chr2g0281621 | 29.000 | 400 | 256 | 13 | 25 | 407 | 35 | 423 | 4.67e-43 | 156 |
| Msa0357100 | MtrunA17_Chr4g0068861 | 29.056 | 413 | 249 | 16 | 21 | 405 | 80 | 476 | 1.41e-42 | 155 |
| Msa0357100 | MtrunA17_Chr2g0279371 | 41.489 | 188 | 94 | 2 | 6 | 192 | 8 | 180 | 4.37e-42 | 146 |
| Msa0357100 | MtrunA17_Chr4g0068841 | 27.470 | 415 | 260 | 11 | 21 | 407 | 34 | 435 | 3.90e-41 | 151 |
| Msa0357100 | MtrunA17_Chr2g0309511 | 28.101 | 395 | 259 | 11 | 25 | 407 | 39 | 420 | 9.16e-41 | 150 |
| Msa0357100 | MtrunA17_Chr2g0304931 | 27.806 | 392 | 257 | 11 | 29 | 407 | 41 | 419 | 6.92e-40 | 148 |
| Msa0357100 | MtrunA17_Chr4g0047861 | 27.543 | 403 | 260 | 15 | 25 | 407 | 53 | 443 | 8.95e-40 | 148 |
| Msa0357100 | MtrunA17_Chr1g0199991 | 27.665 | 394 | 261 | 10 | 26 | 407 | 33 | 414 | 9.79e-40 | 147 |
| Msa0357100 | MtrunA17_Chr1g0199971 | 27.143 | 420 | 275 | 11 | 7 | 407 | 7 | 414 | 1.74e-39 | 147 |
| Msa0357100 | MtrunA17_Chr2g0309521 | 27.342 | 395 | 262 | 12 | 25 | 407 | 39 | 420 | 2.51e-39 | 146 |
| Msa0357100 | MtrunA17_Chr3g0118851 | 28.385 | 384 | 254 | 11 | 29 | 407 | 81 | 448 | 9.03e-38 | 142 |
| Msa0357100 | MtrunA17_Chr2g0309541 | 26.952 | 397 | 265 | 11 | 24 | 407 | 37 | 421 | 9.12e-38 | 142 |
| Msa0357100 | MtrunA17_Chr4g0038311 | 25.236 | 424 | 288 | 12 | 6 | 407 | 5 | 421 | 1.58e-37 | 141 |
| Msa0357100 | MtrunA17_Chr3g0118841 | 27.532 | 385 | 261 | 9 | 26 | 407 | 79 | 448 | 5.66e-37 | 140 |
| Msa0357100 | MtrunA17_Chr2g0318911 | 26.463 | 393 | 268 | 11 | 25 | 407 | 40 | 421 | 6.23e-37 | 140 |
| Msa0357100 | MtrunA17_Chr7g0219051 | 26.650 | 394 | 266 | 12 | 28 | 407 | 38 | 422 | 1.70e-36 | 139 |
| Msa0357100 | MtrunA17_Chr4g0028271 | 27.968 | 379 | 238 | 10 | 42 | 407 | 99 | 455 | 1.99e-36 | 139 |
| Msa0357100 | MtrunA17_Chr1g0153881 | 27.132 | 387 | 256 | 11 | 26 | 407 | 90 | 455 | 1.74e-35 | 136 |
| Msa0357100 | MtrunA17_Chr1g0171411 | 28.721 | 383 | 231 | 13 | 42 | 407 | 85 | 442 | 3.86e-35 | 135 |
| Msa0357100 | MtrunA17_Chr4g0028281 | 27.441 | 379 | 242 | 10 | 41 | 407 | 96 | 453 | 4.17e-35 | 135 |
| Msa0357100 | MtrunA17_Chr7g0221551 | 24.292 | 424 | 277 | 12 | 7 | 407 | 12 | 414 | 1.85e-34 | 133 |
| Msa0357100 | MtrunA17_Chr1g0199171 | 31.982 | 222 | 138 | 3 | 28 | 242 | 71 | 286 | 2.11e-34 | 133 |
| Msa0357100 | MtrunA17_Chr3g0131731 | 24.936 | 393 | 273 | 9 | 29 | 407 | 34 | 418 | 2.33e-34 | 132 |
| Msa0357100 | MtrunA17_Chr2g0327381 | 34.764 | 233 | 136 | 7 | 20 | 242 | 67 | 293 | 2.79e-34 | 134 |
| Msa0357100 | MtrunA17_Chr4g0028241 | 26.431 | 367 | 237 | 9 | 43 | 399 | 92 | 435 | 4.54e-34 | 132 |
| Msa0357100 | MtrunA17_Chr2g0281641 | 28.011 | 357 | 224 | 12 | 72 | 407 | 1 | 345 | 5.75e-34 | 130 |
| Msa0357100 | MtrunA17_Chr4g0020241 | 26.463 | 393 | 256 | 13 | 26 | 407 | 74 | 444 | 8.17e-34 | 131 |
| Msa0357100 | MtrunA17_Chr2g0327401 | 26.277 | 411 | 248 | 11 | 16 | 407 | 85 | 459 | 1.32e-32 | 128 |
| Msa0357100 | MtrunA17_Chr5g0431301 | 25.879 | 398 | 272 | 11 | 25 | 407 | 29 | 418 | 2.41e-32 | 127 |
| Msa0357100 | MtrunA17_Chr3g0090331 | 24.235 | 392 | 268 | 12 | 26 | 407 | 75 | 447 | 2.91e-32 | 127 |
| Msa0357100 | MtrunA17_Chr4g0028261 | 24.873 | 394 | 232 | 10 | 42 | 407 | 120 | 477 | 4.90e-32 | 127 |
| Msa0357100 | MtrunA17_Chr3g0126051 | 25.416 | 421 | 290 | 12 | 3 | 407 | 8 | 420 | 6.67e-32 | 126 |
| Msa0357100 | MtrunA17_Chr3g0126031 | 24.490 | 392 | 281 | 8 | 25 | 407 | 28 | 413 | 1.44e-31 | 125 |
| Msa0357100 | MtrunA17_Chr8g0385871 | 25.735 | 408 | 255 | 15 | 26 | 407 | 34 | 419 | 2.20e-31 | 124 |
| Msa0357100 | MtrunA17_Chr3g0118881 | 27.708 | 397 | 248 | 13 | 29 | 407 | 81 | 456 | 5.35e-31 | 124 |
| Msa0357100 | MtrunA17_Chr2g0327371 | 25.968 | 439 | 248 | 17 | 17 | 407 | 65 | 474 | 1.26e-30 | 123 |
| Msa0357100 | MtrunA17_Chr3g0118831 | 29.316 | 307 | 200 | 8 | 26 | 328 | 78 | 371 | 1.44e-29 | 119 |
| Msa0357100 | MtrunA17_Chr3g0118861 | 26.768 | 396 | 231 | 13 | 26 | 407 | 76 | 426 | 8.70e-29 | 117 |
| Msa0357100 | MtrunA17_Chr1g0153941 | 26.214 | 412 | 255 | 13 | 26 | 407 | 78 | 470 | 1.33e-28 | 117 |
| Msa0357100 | MtrunA17_Chr3g0118891 | 29.677 | 310 | 194 | 9 | 26 | 328 | 78 | 370 | 4.73e-27 | 112 |
| Msa0357100 | MtrunA17_Chr1g0153931 | 35.326 | 184 | 110 | 5 | 26 | 205 | 76 | 254 | 5.04e-25 | 103 |
| Msa0357100 | MtrunA17_Chr1g0165811 | 28.507 | 221 | 143 | 6 | 26 | 244 | 31 | 238 | 3.46e-24 | 100 |
| Msa0357100 | MtrunA17_Chr5g0447441 | 23.958 | 384 | 254 | 12 | 36 | 407 | 39 | 396 | 9.53e-24 | 102 |
| Msa0357100 | MtrunA17_Chr4g0044051 | 22.164 | 379 | 259 | 9 | 41 | 407 | 46 | 400 | 3.44e-20 | 92.0 |
| Msa0357100 | MtrunA17_Chr1g0204191 | 23.250 | 400 | 245 | 14 | 26 | 407 | 92 | 447 | 4.53e-20 | 92.0 |
| Msa0357100 | MtrunA17_Chr2g0285401 | 38.462 | 78 | 36 | 1 | 342 | 407 | 7 | 84 | 2.02e-11 | 60.1 |
| Msa0357100 | MtrunA17_Chr1g0153921 | 28.272 | 191 | 109 | 6 | 225 | 407 | 4 | 174 | 6.85e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0357100 | AT1G33540.1 | 46.883 | 401 | 200 | 5 | 20 | 407 | 23 | 423 | 5.37e-124 | 367 |
| Msa0357100 | AT5G36180.1 | 46.410 | 390 | 191 | 3 | 20 | 407 | 27 | 400 | 5.75e-121 | 358 |
| Msa0357100 | AT1G73280.1 | 44.581 | 406 | 207 | 3 | 4 | 407 | 11 | 400 | 7.15e-121 | 358 |
| Msa0357100 | AT1G73300.1 | 45.897 | 390 | 193 | 3 | 20 | 407 | 27 | 400 | 1.72e-120 | 357 |
| Msa0357100 | AT1G73300.2 | 45.897 | 390 | 193 | 3 | 20 | 407 | 27 | 400 | 1.72e-120 | 357 |
| Msa0357100 | AT1G73310.2 | 46.410 | 390 | 191 | 3 | 20 | 407 | 27 | 400 | 2.23e-119 | 354 |
| Msa0357100 | AT1G73310.1 | 46.410 | 390 | 191 | 3 | 20 | 407 | 27 | 400 | 2.93e-119 | 354 |
| Msa0357100 | AT3G10450.4 | 45.220 | 387 | 196 | 2 | 22 | 407 | 25 | 396 | 2.75e-118 | 350 |
| Msa0357100 | AT3G10450.1 | 45.220 | 387 | 196 | 2 | 22 | 407 | 25 | 396 | 7.71e-118 | 350 |
| Msa0357100 | AT1G73270.2 | 46.923 | 390 | 189 | 3 | 20 | 407 | 27 | 400 | 9.97e-118 | 350 |
| Msa0357100 | AT1G73270.1 | 46.923 | 390 | 189 | 3 | 20 | 407 | 27 | 400 | 1.06e-117 | 350 |
| Msa0357100 | AT2G23000.1 | 46.076 | 395 | 189 | 4 | 20 | 407 | 19 | 396 | 1.23e-117 | 350 |
| Msa0357100 | AT2G23000.2 | 46.076 | 395 | 189 | 4 | 20 | 407 | 19 | 396 | 1.23e-117 | 350 |
| Msa0357100 | AT1G73290.3 | 44.872 | 390 | 195 | 4 | 20 | 407 | 26 | 397 | 5.85e-116 | 344 |
| Msa0357100 | AT1G73290.1 | 44.872 | 390 | 195 | 4 | 20 | 407 | 26 | 397 | 1.87e-115 | 344 |
| Msa0357100 | AT3G12203.1 | 42.677 | 396 | 210 | 2 | 13 | 407 | 17 | 396 | 1.00e-113 | 340 |
| Msa0357100 | AT3G12203.3 | 42.711 | 391 | 207 | 2 | 18 | 407 | 1 | 375 | 1.59e-113 | 338 |
| Msa0357100 | AT2G23010.2 | 44.000 | 400 | 212 | 4 | 9 | 407 | 8 | 396 | 2.84e-113 | 338 |
| Msa0357100 | AT2G23010.1 | 44.000 | 400 | 212 | 4 | 9 | 407 | 8 | 396 | 3.13e-113 | 338 |
| Msa0357100 | AT1G33540.2 | 45.889 | 377 | 191 | 5 | 44 | 407 | 4 | 380 | 3.39e-113 | 338 |
| Msa0357100 | AT2G22980.2 | 44.246 | 391 | 194 | 5 | 20 | 407 | 20 | 389 | 7.14e-113 | 337 |
| Msa0357100 | AT2G22970.4 | 44.872 | 390 | 197 | 4 | 20 | 407 | 19 | 392 | 1.57e-112 | 336 |
| Msa0357100 | AT2G22980.1 | 44.246 | 391 | 194 | 5 | 20 | 407 | 20 | 389 | 1.67e-112 | 336 |
| Msa0357100 | AT2G22980.4 | 44.246 | 391 | 194 | 5 | 20 | 407 | 20 | 389 | 1.92e-112 | 336 |
| Msa0357100 | AT2G22920.1 | 43.990 | 391 | 201 | 3 | 20 | 407 | 19 | 394 | 2.31e-112 | 335 |
| Msa0357100 | AT2G22970.1 | 44.872 | 390 | 197 | 4 | 20 | 407 | 19 | 392 | 3.16e-112 | 336 |
| Msa0357100 | AT2G22970.3 | 44.872 | 390 | 197 | 4 | 20 | 407 | 19 | 392 | 3.23e-112 | 336 |
| Msa0357100 | AT2G22990.4 | 43.188 | 389 | 207 | 3 | 20 | 407 | 17 | 392 | 4.80e-112 | 335 |
| Msa0357100 | AT2G22920.2 | 43.990 | 391 | 201 | 3 | 20 | 407 | 19 | 394 | 5.03e-112 | 335 |
| Msa0357100 | AT2G22990.1 | 43.188 | 389 | 207 | 3 | 20 | 407 | 17 | 392 | 5.44e-112 | 335 |
| Msa0357100 | AT2G22990.3 | 43.188 | 389 | 207 | 3 | 20 | 407 | 17 | 392 | 5.49e-112 | 336 |
| Msa0357100 | AT3G12220.1 | 44.330 | 388 | 198 | 3 | 22 | 407 | 23 | 394 | 7.24e-111 | 332 |
| Msa0357100 | AT5G09640.1 | 41.007 | 417 | 228 | 7 | 8 | 407 | 9 | 424 | 1.99e-108 | 327 |
| Msa0357100 | AT2G22990.5 | 42.416 | 389 | 201 | 4 | 20 | 407 | 17 | 383 | 6.35e-106 | 319 |
| Msa0357100 | AT3G10450.3 | 43.014 | 365 | 192 | 2 | 44 | 407 | 4 | 353 | 1.14e-104 | 314 |
| Msa0357100 | AT3G10450.2 | 43.014 | 365 | 192 | 2 | 44 | 407 | 4 | 353 | 2.83e-104 | 314 |
| Msa0357100 | AT1G73280.2 | 43.869 | 367 | 188 | 3 | 4 | 368 | 11 | 361 | 5.55e-104 | 313 |
| Msa0357100 | AT3G12230.1 | 41.085 | 387 | 212 | 2 | 22 | 407 | 23 | 394 | 2.86e-102 | 310 |
| Msa0357100 | AT3G12240.1 | 40.722 | 388 | 212 | 3 | 22 | 407 | 24 | 395 | 3.86e-102 | 310 |
| Msa0357100 | AT3G12220.2 | 42.623 | 366 | 192 | 3 | 44 | 407 | 15 | 364 | 8.86e-99 | 300 |
| Msa0357100 | AT2G22980.3 | 43.785 | 354 | 173 | 6 | 20 | 368 | 20 | 352 | 2.37e-95 | 290 |
| Msa0357100 | AT3G12203.2 | 40.395 | 354 | 194 | 2 | 55 | 407 | 1 | 338 | 2.80e-95 | 290 |
| Msa0357100 | AT2G22920.4 | 46.302 | 311 | 151 | 2 | 20 | 329 | 19 | 314 | 3.53e-91 | 278 |
| Msa0357100 | AT2G22970.2 | 46.302 | 311 | 150 | 3 | 20 | 329 | 19 | 313 | 3.69e-90 | 275 |
| Msa0357100 | AT1G73290.2 | 49.248 | 266 | 132 | 2 | 20 | 284 | 26 | 289 | 2.96e-87 | 267 |
| Msa0357100 | AT3G12220.3 | 38.501 | 387 | 170 | 3 | 22 | 407 | 23 | 342 | 1.73e-83 | 260 |
| Msa0357100 | AT1G73310.3 | 41.479 | 311 | 165 | 2 | 98 | 407 | 4 | 298 | 9.92e-79 | 246 |
| Msa0357100 | AT1G73280.4 | 40.836 | 311 | 167 | 2 | 98 | 407 | 4 | 298 | 1.02e-78 | 246 |
| Msa0357100 | AT5G36180.2 | 40.836 | 311 | 167 | 2 | 98 | 407 | 4 | 298 | 6.67e-78 | 244 |
| Msa0357100 | AT5G36180.4 | 40.836 | 311 | 167 | 2 | 98 | 407 | 4 | 298 | 1.28e-77 | 244 |
| Msa0357100 | AT5G36180.5 | 40.836 | 311 | 167 | 2 | 98 | 407 | 4 | 298 | 1.34e-77 | 244 |
| Msa0357100 | AT5G36180.3 | 40.836 | 311 | 167 | 2 | 98 | 407 | 4 | 298 | 1.34e-77 | 244 |
| Msa0357100 | AT4G12910.2 | 32.301 | 452 | 259 | 7 | 1 | 407 | 6 | 455 | 4.01e-77 | 246 |
| Msa0357100 | AT4G12910.1 | 32.301 | 452 | 259 | 7 | 1 | 407 | 6 | 455 | 1.06e-76 | 246 |
| Msa0357100 | AT3G25420.1 | 31.739 | 460 | 253 | 9 | 1 | 407 | 1 | 452 | 1.69e-74 | 241 |
| Msa0357100 | AT1G73280.3 | 40.830 | 289 | 154 | 2 | 120 | 407 | 1 | 273 | 9.34e-73 | 230 |
| Msa0357100 | AT2G22990.6 | 39.175 | 291 | 164 | 2 | 117 | 407 | 1 | 278 | 5.62e-71 | 226 |
| Msa0357100 | AT2G22990.2 | 39.175 | 291 | 164 | 2 | 117 | 407 | 1 | 278 | 6.60e-71 | 226 |
| Msa0357100 | AT2G22980.5 | 39.932 | 293 | 153 | 4 | 117 | 407 | 1 | 272 | 1.06e-67 | 217 |
| Msa0357100 | AT5G23210.1 | 27.913 | 412 | 257 | 11 | 26 | 407 | 52 | 453 | 2.07e-46 | 166 |
| Msa0357100 | AT5G23210.3 | 27.805 | 410 | 256 | 11 | 26 | 405 | 52 | 451 | 7.22e-46 | 164 |
| Msa0357100 | AT2G22920.3 | 36.444 | 225 | 126 | 2 | 185 | 407 | 6 | 215 | 1.49e-43 | 152 |
| Msa0357100 | AT2G05850.1 | 27.665 | 394 | 259 | 11 | 25 | 407 | 63 | 441 | 1.56e-43 | 159 |
| Msa0357100 | AT4G15100.1 | 27.885 | 416 | 261 | 12 | 18 | 407 | 37 | 439 | 9.08e-43 | 156 |
| Msa0357100 | AT1G61130.1 | 27.930 | 401 | 258 | 12 | 25 | 407 | 31 | 418 | 9.47e-43 | 156 |
| Msa0357100 | AT3G52020.1 | 27.806 | 392 | 259 | 11 | 25 | 407 | 79 | 455 | 4.87e-42 | 155 |
| Msa0357100 | AT2G35770.1 | 27.014 | 422 | 276 | 10 | 3 | 407 | 8 | 414 | 3.97e-41 | 151 |
| Msa0357100 | AT5G22980.1 | 29.016 | 386 | 224 | 11 | 42 | 407 | 100 | 455 | 2.53e-40 | 150 |
| Msa0357100 | AT2G35780.1 | 28.499 | 393 | 251 | 12 | 29 | 407 | 33 | 409 | 2.61e-40 | 149 |
| Msa0357100 | AT3G52000.1 | 25.193 | 389 | 270 | 8 | 25 | 407 | 63 | 436 | 2.68e-40 | 149 |
| Msa0357100 | AT3G52010.1 | 26.835 | 395 | 260 | 12 | 25 | 407 | 64 | 441 | 3.40e-40 | 149 |
| Msa0357100 | AT1G11080.1 | 28.780 | 410 | 253 | 12 | 25 | 407 | 50 | 447 | 3.66e-40 | 149 |
| Msa0357100 | AT1G11080.2 | 28.780 | 410 | 253 | 12 | 25 | 407 | 50 | 447 | 3.79e-40 | 149 |
| Msa0357100 | AT1G43780.1 | 26.263 | 396 | 274 | 9 | 25 | 407 | 37 | 427 | 8.04e-40 | 148 |
| Msa0357100 | AT3G17180.1 | 27.249 | 389 | 249 | 14 | 42 | 407 | 55 | 432 | 1.34e-39 | 147 |
| Msa0357100 | AT1G28110.1 | 27.206 | 408 | 247 | 14 | 26 | 407 | 32 | 415 | 4.31e-39 | 146 |
| Msa0357100 | AT1G28110.2 | 27.206 | 408 | 247 | 14 | 26 | 407 | 32 | 415 | 4.31e-39 | 146 |
| Msa0357100 | AT3G17180.2 | 27.132 | 387 | 248 | 14 | 42 | 405 | 55 | 430 | 7.27e-39 | 145 |
| Msa0357100 | AT4G30810.1 | 24.471 | 425 | 291 | 10 | 4 | 407 | 5 | 420 | 1.80e-38 | 144 |
| Msa0357100 | AT3G45010.1 | 27.838 | 370 | 236 | 10 | 38 | 398 | 99 | 446 | 7.59e-38 | 143 |
| Msa0357100 | AT5G08260.1 | 26.817 | 399 | 263 | 14 | 31 | 407 | 42 | 433 | 1.89e-37 | 142 |
| Msa0357100 | AT3G07990.1 | 26.343 | 391 | 270 | 9 | 26 | 407 | 34 | 415 | 1.33e-36 | 139 |
| Msa0357100 | AT3G10410.1 | 28.947 | 380 | 232 | 11 | 42 | 407 | 101 | 456 | 2.14e-36 | 139 |
| Msa0357100 | AT2G24010.1 | 26.786 | 392 | 266 | 12 | 25 | 407 | 30 | 409 | 7.75e-36 | 137 |
| Msa0357100 | AT2G33530.1 | 25.917 | 409 | 253 | 15 | 26 | 407 | 34 | 419 | 1.25e-35 | 136 |
| Msa0357100 | AT2G24000.1 | 26.368 | 402 | 263 | 12 | 26 | 407 | 31 | 419 | 4.19e-35 | 135 |
| Msa0357100 | AT3G63470.1 | 26.131 | 398 | 255 | 17 | 25 | 407 | 81 | 454 | 7.49e-35 | 135 |
| Msa0357100 | AT4G30610.1 | 25.250 | 400 | 269 | 12 | 26 | 407 | 33 | 420 | 1.74e-33 | 130 |
| Msa0357100 | AT5G23210.5 | 26.111 | 360 | 227 | 10 | 78 | 407 | 8 | 358 | 2.95e-33 | 129 |
| Msa0357100 | AT2G12480.3 | 25.822 | 426 | 278 | 13 | 4 | 407 | 5 | 414 | 5.45e-33 | 129 |
| Msa0357100 | AT5G23210.2 | 25.905 | 359 | 227 | 10 | 79 | 407 | 8 | 357 | 2.49e-32 | 126 |
| Msa0357100 | AT2G12480.4 | 25.120 | 418 | 267 | 13 | 4 | 407 | 5 | 390 | 6.68e-32 | 126 |
| Msa0357100 | AT5G23210.4 | 25.770 | 357 | 226 | 10 | 79 | 405 | 8 | 355 | 1.32e-31 | 124 |
| Msa0357100 | AT2G24010.2 | 25.553 | 407 | 267 | 13 | 25 | 407 | 30 | 424 | 4.07e-31 | 124 |
| Msa0357100 | AT2G12480.1 | 24.880 | 418 | 266 | 13 | 4 | 407 | 5 | 388 | 6.31e-31 | 123 |
| Msa0357100 | AT2G12480.2 | 24.880 | 418 | 266 | 13 | 4 | 407 | 5 | 388 | 7.19e-31 | 123 |
| Msa0357100 | AT5G42230.1 | 24.460 | 417 | 296 | 10 | 4 | 407 | 7 | 417 | 2.46e-30 | 122 |
| Msa0357100 | AT5G42230.2 | 24.460 | 417 | 296 | 10 | 4 | 407 | 7 | 417 | 2.46e-30 | 122 |
| Msa0357100 | AT5G42240.1 | 25.547 | 411 | 257 | 13 | 25 | 407 | 32 | 421 | 6.32e-30 | 120 |
| Msa0357100 | AT3G02110.1 | 23.799 | 437 | 280 | 14 | 9 | 407 | 8 | 429 | 1.18e-29 | 120 |
| Msa0357100 | AT1G15000.1 | 25.515 | 388 | 244 | 15 | 33 | 407 | 30 | 385 | 5.32e-28 | 115 |
| Msa0357100 | AT2G24010.3 | 24.769 | 432 | 264 | 16 | 25 | 407 | 1 | 420 | 5.63e-28 | 115 |
| Msa0357100 | AT3G56540.1 | 37.821 | 156 | 91 | 3 | 25 | 179 | 79 | 229 | 6.50e-27 | 108 |
| Msa0357100 | AT2G24010.4 | 25.000 | 368 | 240 | 13 | 25 | 368 | 1 | 356 | 9.83e-24 | 101 |
| Msa0357100 | AT2G22960.1 | 40.206 | 97 | 58 | 0 | 311 | 407 | 47 | 143 | 3.69e-22 | 93.6 |
| Msa0357100 | AT5G22960.1 | 26.220 | 164 | 97 | 2 | 41 | 204 | 35 | 174 | 1.89e-16 | 77.8 |
Find 91 sgRNAs with CRISPR-Local
Find 335 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCTGTGCATTGAAATTT+TGG | 0.074854 | 3_1:+37830206 | None:intergenic |
| GAGACACACTTTGTGTTATT+TGG | 0.142435 | 3_1:+37825609 | None:intergenic |
| AAACAATTGAATTGCATTAT+TGG | 0.145288 | 3_1:+37830259 | None:intergenic |
| AACATCCAAGCTCTCATTTA+TGG | 0.152486 | 3_1:-37825008 | Msa0357100:CDS |
| TTCAAGATGATCAAGAATTT+TGG | 0.210650 | 3_1:-37825399 | Msa0357100:CDS |
| AGGAATATGCTTCCTTATAT+TGG | 0.245065 | 3_1:-37830189 | Msa0357100:five_prime_UTR |
| CCAACGAACCAAAGTAAAAT+TGG | 0.255453 | 3_1:+37827954 | None:intergenic |
| TCTGCCATTCATGGTTTATT+CGG | 0.256799 | 3_1:-37829801 | Msa0357100:CDS |
| TTAGAGTTATTATCATATTC+TGG | 0.265014 | 3_1:-37825282 | Msa0357100:intron |
| GTAACCTCATAGAGTTCTTT+TGG | 0.276248 | 3_1:+37825826 | None:intergenic |
| GATCAATAAAGGGATTTCTT+TGG | 0.279427 | 3_1:+37827976 | None:intergenic |
| GAACAGGTTGTCGAATTATC+TGG | 0.296761 | 3_1:+37825419 | None:intergenic |
| TTTAATGCTTCTGCCATTCA+TGG | 0.306015 | 3_1:-37829810 | Msa0357100:CDS |
| ATCAATAAAGGGATTTCTTT+GGG | 0.306892 | 3_1:+37827977 | None:intergenic |
| AAGTAAAATTGGATCAATAA+AGG | 0.309391 | 3_1:+37827965 | None:intergenic |
| GAGCCACCACCTATGTAAAA+TGG | 0.310655 | 3_1:+37826514 | None:intergenic |
| TAATCGTCATCCATTGTTAA+TGG | 0.320811 | 3_1:+37826827 | None:intergenic |
| CTTCCATTCAAGCTTGAAAC+AGG | 0.320931 | 3_1:-37829740 | Msa0357100:CDS |
| ACATGAGCACACATGATAAA+TGG | 0.322373 | 3_1:-37824604 | Msa0357100:CDS |
| AAAATAAAAGTGCCAATATA+AGG | 0.326613 | 3_1:+37830177 | None:intergenic |
| CTGCCATTCATGGTTTATTC+GGG | 0.352819 | 3_1:-37829800 | Msa0357100:CDS |
| GTGAGAAATGGTCAAGGTTA+AGG | 0.354359 | 3_1:+37830119 | None:intergenic |
| ATCATATTCTGGTCGACATA+TGG | 0.356883 | 3_1:-37825271 | Msa0357100:CDS |
| CACCCTGTTTCAAGCTTGAA+TGG | 0.358249 | 3_1:+37829737 | None:intergenic |
| ATAGGTGGTGGCTCATATTC+AGG | 0.362426 | 3_1:-37826505 | Msa0357100:CDS |
| TCTATTGTCAAGAAACTTCC+TGG | 0.362765 | 3_1:-37829776 | Msa0357100:CDS |
| TATGGATTCAATTTAAGCTT+TGG | 0.364416 | 3_1:+37826791 | None:intergenic |
| TTCTGAATTATTGTGAGAAA+TGG | 0.379594 | 3_1:+37830107 | None:intergenic |
| AATGGATTTGAGCTAAACTT+TGG | 0.381264 | 3_1:+37826532 | None:intergenic |
| CTTTGGTTCGTTGGAGGTCC+AGG | 0.395793 | 3_1:-37827945 | Msa0357100:CDS |
| AATAATTCAGAACTATTATC+TGG | 0.396469 | 3_1:-37830096 | Msa0357100:intron |
| ACATCCAAGCTCTCATTTAT+GGG | 0.397259 | 3_1:-37825007 | Msa0357100:intron |
| TCTTCAGTTGGGTAGTGTGA+TGG | 0.397458 | 3_1:-37829864 | Msa0357100:intron |
| AATTCTTGATCATCTTGAAC+AGG | 0.398440 | 3_1:+37825403 | None:intergenic |
| AGTAAAATTGGATCAATAAA+GGG | 0.403601 | 3_1:+37827966 | None:intergenic |
| CCAATTTAAATAGGGAACTA+AGG | 0.404057 | 3_1:-37825117 | Msa0357100:intron |
| AAGCTTAAATTGAATCCATA+TGG | 0.406503 | 3_1:-37826788 | Msa0357100:CDS |
| TCACGTTTATATGCTTATAC+AGG | 0.423746 | 3_1:+37825881 | None:intergenic |
| CACAACTGAGTACACAATCT+TGG | 0.425607 | 3_1:-37824640 | Msa0357100:CDS |
| GTCATTGGAGGAAAATTGTA+AGG | 0.427277 | 3_1:-37825652 | Msa0357100:CDS |
| AACATATGTGTCCAACCATA+TGG | 0.429002 | 3_1:+37826773 | None:intergenic |
| CTTACTTTGATGTTTATATG+TGG | 0.434551 | 3_1:+37826023 | None:intergenic |
| CTTCAGTTGGGTAGTGTGAT+GGG | 0.440964 | 3_1:-37829863 | Msa0357100:intron |
| TCATATTCTGGTCGACATAT+GGG | 0.442425 | 3_1:-37825270 | Msa0357100:CDS |
| AGATGTAGCTGTATTGTGTT+AGG | 0.443875 | 3_1:-37829836 | Msa0357100:CDS |
| TGTCCAAAATTTCAATGCAC+AGG | 0.450191 | 3_1:-37830209 | Msa0357100:five_prime_UTR |
| TTTGAGATGCAACAAGACTT+TGG | 0.458687 | 3_1:-37825087 | Msa0357100:CDS |
| TGCTTATACAGGTCAACAGC+AGG | 0.461979 | 3_1:+37825892 | None:intergenic |
| CGAATTATCTGGTTTACAGC+AGG | 0.475505 | 3_1:+37825430 | None:intergenic |
| TTTGTTGAAGGTCAAGTAGC+CGG | 0.506940 | 3_1:-37824572 | Msa0357100:CDS |
| CAATTTAAATAGGGAACTAA+GGG | 0.515243 | 3_1:-37825116 | Msa0357100:intron |
| GTTACCCATAAATGAGAGCT+TGG | 0.518502 | 3_1:+37825003 | None:intergenic |
| TTGTTGAAGGTCAAGTAGCC+GGG | 0.522863 | 3_1:-37824571 | Msa0357100:CDS |
| GAACCCGAATAAACCATGAA+TGG | 0.531753 | 3_1:+37829797 | None:intergenic |
| GCGATAATATTCTACAGCAC+TGG | 0.536867 | 3_1:+37825046 | None:intergenic |
| TATAATGTTGCAGTCATTGG+AGG | 0.537774 | 3_1:-37825664 | Msa0357100:intron |
| GATTCAATTTAAGCTTTGGA+AGG | 0.537959 | 3_1:+37826795 | None:intergenic |
| TTAAATTGAATCCATATGGT+TGG | 0.543123 | 3_1:-37826784 | Msa0357100:CDS |
| GCTGAAAGTGCAGAACATCC+TGG | 0.543233 | 3_1:+37827927 | None:intergenic |
| CACATGATAAATGGCGTGCA+TGG | 0.547129 | 3_1:-37824595 | Msa0357100:CDS |
| TATACCAAAAGAACTCTATG+AGG | 0.551652 | 3_1:-37825830 | Msa0357100:intron |
| AGTTGGGTAGTGTGATGGGT+TGG | 0.552995 | 3_1:-37829859 | Msa0357100:intron |
| TGGCGTGCATGGTTTGTTGA+AGG | 0.557717 | 3_1:-37824584 | Msa0357100:CDS |
| AAACGATGAAAATGTGCGCA+AGG | 0.564951 | 3_1:-37825246 | Msa0357100:CDS |
| TCTTACTCAGAAACACAAGA+AGG | 0.568210 | 3_1:-37826710 | Msa0357100:CDS |
| TCATATTCAGGATTTACTAC+CGG | 0.568587 | 3_1:-37826493 | Msa0357100:CDS |
| TTGTGTAGATACATAGGAGT+GGG | 0.572101 | 3_1:-37828041 | Msa0357100:intron |
| ATAGATATACCAGTTGGGAC+TGG | 0.589621 | 3_1:-37826737 | Msa0357100:CDS |
| TGTGTATTGTGTAGATACAT+AGG | 0.592376 | 3_1:-37828047 | Msa0357100:intron |
| CAAGATTGTGTACTCAGTTG+TGG | 0.595973 | 3_1:+37824641 | None:intergenic |
| TGTACATAGATATACCAGTT+GGG | 0.596725 | 3_1:-37826742 | Msa0357100:CDS |
| AGGAGTGGGAGAAGGAGCAA+AGG | 0.597291 | 3_1:-37828027 | Msa0357100:CDS |
| TTATACAGGGCCATTAACAA+TGG | 0.601640 | 3_1:-37826837 | Msa0357100:intron |
| GAGAGCTTGGATGTTGGCGT+TGG | 0.610183 | 3_1:+37825016 | None:intergenic |
| ATAAATGAGAGCTTGGATGT+TGG | 0.612398 | 3_1:+37825010 | None:intergenic |
| GGAAGTTCCCCATCAAAACC+AGG | 0.614528 | 3_1:+37829758 | None:intergenic |
| AGATACATAGGAGTGGGAGA+AGG | 0.622687 | 3_1:-37828035 | Msa0357100:CDS |
| TAGCAGTGACACACTGTGGG+TGG | 0.627959 | 3_1:-37826681 | Msa0357100:CDS |
| ATTGTGTAGATACATAGGAG+TGG | 0.639457 | 3_1:-37828042 | Msa0357100:intron |
| GCTTATACAGGTCAACAGCA+GGG | 0.641149 | 3_1:+37825893 | None:intergenic |
| ATTATTGTGAGAAATGGTCA+AGG | 0.654166 | 3_1:+37830113 | None:intergenic |
| CTATAGCAGTGACACACTGT+GGG | 0.654695 | 3_1:-37826684 | Msa0357100:CDS |
| TTCCATTCAAGCTTGAAACA+GGG | 0.655856 | 3_1:-37829739 | Msa0357100:intron |
| ATGTACATAGATATACCAGT+TGG | 0.665621 | 3_1:-37826743 | Msa0357100:CDS |
| ACTATAGCAGTGACACACTG+TGG | 0.674845 | 3_1:-37826685 | Msa0357100:CDS |
| TCATTGGAGGAAAATTGTAA+GGG | 0.680464 | 3_1:-37825651 | Msa0357100:CDS |
| AATTTAAATAGGGAACTAAG+GGG | 0.694403 | 3_1:-37825115 | Msa0357100:intron |
| ATTTAAATAGGGAACTAAGG+GGG | 0.702064 | 3_1:-37825114 | Msa0357100:intron |
| GCAGGTGTTGTGATACAGAG+AGG | 0.709877 | 3_1:+37825448 | None:intergenic |
| CAAGGCTCTTCATGTCAGAG+AGG | 0.710069 | 3_1:-37825228 | Msa0357100:intron |
| ACAATGGATGACGATTACAG+TGG | 0.739292 | 3_1:-37826821 | Msa0357100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAAAAATTTATTTTAAAT+AGG | + | chr3_1:37825594-37825613 | None:intergenic | 0.0% |
| !!! | ATTTTTTTTTTAAAAAAAAT+GGG | + | chr3_1:37826490-37826509 | None:intergenic | 0.0% |
| !!! | AATTTTTTTTTTAAAAAAAA+TGG | + | chr3_1:37826491-37826510 | None:intergenic | 0.0% |
| !!! | ATTTTAATTAAAAACATGTT+TGG | - | chr3_1:37826276-37826295 | Msa0357100:intron | 10.0% |
| !!! | TTAATTTGATGATTTAAATT+TGG | - | chr3_1:37828716-37828735 | Msa0357100:intron | 10.0% |
| !! | TAAGATAATTAGTTATATAT+AGG | + | chr3_1:37828883-37828902 | None:intergenic | 10.0% |
| !!! | TTTTTTTTTTTTCTTCAGTT+GGG | - | chr3_1:37824951-37824970 | Msa0357100:intron | 15.0% |
| !! | GATGTTTATATATATATGAA+CGG | + | chr3_1:37825210-37825229 | None:intergenic | 15.0% |
| !! | ATCATTTGTATCTAATAAAA+AGG | - | chr3_1:37825227-37825246 | Msa0357100:intron | 15.0% |
| !!! | AATAAAAAGGTGTTTAAATA+TGG | - | chr3_1:37825240-37825259 | Msa0357100:CDS | 15.0% |
| !!! | ATAAAAAGGTGTTTAAATAT+GGG | - | chr3_1:37825241-37825260 | Msa0357100:CDS | 15.0% |
| !!! | AAATACTGCTATTAATTTTT+TGG | - | chr3_1:37826006-37826025 | Msa0357100:intron | 15.0% |
| !!! | TCATTCTTACTTAAATTTTA+AGG | + | chr3_1:37826347-37826366 | None:intergenic | 15.0% |
| !! | GATTAATATCATTATTACAT+TGG | + | chr3_1:37826408-37826427 | None:intergenic | 15.0% |
| !!! | TACATATTCTTTTTTACAAA+AGG | - | chr3_1:37828172-37828191 | Msa0357100:intron | 15.0% |
| !! | AATGATTATAAGATTCATAA+TGG | + | chr3_1:37829030-37829049 | None:intergenic | 15.0% |
| !! | TTCAATAATCCAATTTAAAT+AGG | - | chr3_1:37829700-37829719 | Msa0357100:intron | 15.0% |
| !! | TCAATAATCCAATTTAAATA+GGG | - | chr3_1:37829701-37829720 | Msa0357100:intron | 15.0% |
| !! | ATAACATTATCAAAGAAAAA+AGG | + | chr3_1:37830102-37830121 | None:intergenic | 15.0% |
| !!! | AAAATAAAAGTGCCAATATA+AGG | + | chr3_1:37824652-37824671 | None:intergenic | 20.0% |
| !! | AATAATTCAGAACTATTATC+TGG | - | chr3_1:37824730-37824749 | Msa0357100:intron | 20.0% |
| !!! | ATTTTCTTCGATTTTCATTT+TGG | - | chr3_1:37824775-37824794 | Msa0357100:intron | 20.0% |
| !!! | GTTTTTTTTTTTTCTTCAGT+TGG | - | chr3_1:37824950-37824969 | Msa0357100:intron | 20.0% |
| !! | TTTATATATATATGAACGGA+GGG | + | chr3_1:37825206-37825225 | None:intergenic | 20.0% |
| !!! | TAAAAAGGTGTTTAAATATG+GGG | - | chr3_1:37825242-37825261 | Msa0357100:CDS | 20.0% |
| !! | GTGAAAAGAATAAACAAATA+AGG | - | chr3_1:37825326-37825345 | Msa0357100:intron | 20.0% |
| !! | AGAATAAACAAATAAGGATA+AGG | - | chr3_1:37825332-37825351 | Msa0357100:intron | 20.0% |
| !! | GAATAAACAAATAAGGATAA+GGG | - | chr3_1:37825333-37825352 | Msa0357100:intron | 20.0% |
| !! | CAATATATCTTCAATAAGAT+TGG | + | chr3_1:37825650-37825669 | None:intergenic | 20.0% |
| !! | GCTATATTTCTTATATGTTA+AGG | - | chr3_1:37825962-37825981 | Msa0357100:intron | 20.0% |
| !!! | TCTCTAAAAAACTCTAATTT+GGG | - | chr3_1:37826438-37826457 | Msa0357100:intron | 20.0% |
| !!! | TTTAACTTATTAGCCAATTA+TGG | - | chr3_1:37826755-37826774 | Msa0357100:CDS | 20.0% |
| !! | AGTAAAATTGGATCAATAAA+GGG | + | chr3_1:37826863-37826882 | None:intergenic | 20.0% |
| !! | AAGTAAAATTGGATCAATAA+AGG | + | chr3_1:37826864-37826883 | None:intergenic | 20.0% |
| !!! | TTATTGATCCAATTTTACTT+TGG | - | chr3_1:37826864-37826883 | Msa0357100:intron | 20.0% |
| !! | GAATGAGAAAAATATACATT+TGG | + | chr3_1:37826998-37827017 | None:intergenic | 20.0% |
| !! | TGACTTATCATAGTATAAAA+AGG | + | chr3_1:37827094-37827113 | None:intergenic | 20.0% |
| !! | TTATACTATGATAAGTCATT+AGG | - | chr3_1:37827096-37827115 | Msa0357100:intron | 20.0% |
| !! | AACAAAAATTGTTATAGTCA+AGG | + | chr3_1:37827766-37827785 | None:intergenic | 20.0% |
| !!! | TACACTTCACTTATAATTTT+GGG | + | chr3_1:37827931-37827950 | None:intergenic | 20.0% |
| !! | TTTATGATTTATCAATGCAA+AGG | - | chr3_1:37828219-37828238 | Msa0357100:intron | 20.0% |
| !!! | ATCAAATTAACATTTGTTAC+TGG | + | chr3_1:37828706-37828725 | None:intergenic | 20.0% |
| !!! | ATGATAATAACTCTAAAAGA+CGG | + | chr3_1:37829540-37829559 | None:intergenic | 20.0% |
| !! | TTAGAGTTATTATCATATTC+TGG | - | chr3_1:37829544-37829563 | Msa0357100:intron | 20.0% |
| ! | TTCTGAATTATTGTGAGAAA+TGG | + | chr3_1:37824722-37824741 | None:intergenic | 25.0% |
| ! | AACAAGTAATTAAGTTCAAG+TGG | + | chr3_1:37824933-37824952 | None:intergenic | 25.0% |
| ! | GTTTATATATATATGAACGG+AGG | + | chr3_1:37825207-37825226 | None:intergenic | 25.0% |
| !!! | AAATAAGGATAAGGGTATTT+AGG | - | chr3_1:37825341-37825360 | Msa0357100:intron | 25.0% |
| !!! | AATAAGGATAAGGGTATTTA+GGG | - | chr3_1:37825342-37825361 | Msa0357100:intron | 25.0% |
| ! | AATAAATAAGGAAGAGAGAT+GGG | + | chr3_1:37825451-37825470 | None:intergenic | 25.0% |
| ! | TAATAAATAAGGAAGAGAGA+TGG | + | chr3_1:37825452-37825471 | None:intergenic | 25.0% |
| ! | GTTAGGTATGCTAATAAATA+AGG | + | chr3_1:37825463-37825482 | None:intergenic | 25.0% |
| ! | TGGATATAATTTCTCATGTT+AGG | + | chr3_1:37825480-37825499 | None:intergenic | 25.0% |
| ! | TTGAATAAGATTACTTTCGA+TGG | - | chr3_1:37825562-37825581 | Msa0357100:intron | 25.0% |
| ! | AATAAGAAGTGAGAAAAACA+AGG | + | chr3_1:37825805-37825824 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr3_1:37825804-37825823 | Msa0357100:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr3_1:37825817-37825836 | Msa0357100:intron | 25.0% |
| ! | ATTTCTCATATGAAAACACA+GGG | - | chr3_1:37825933-37825952 | Msa0357100:intron | 25.0% |
| !!! | GTTTTAGTTAAACATATGTG+TGG | - | chr3_1:37826221-37826240 | Msa0357100:intron | 25.0% |
| !! | CTCTCTAAAAAACTCTAATT+TGG | - | chr3_1:37826437-37826456 | Msa0357100:intron | 25.0% |
| !! | CTCTAAAAAACTCTAATTTG+GGG | - | chr3_1:37826439-37826458 | Msa0357100:intron | 25.0% |
| ! | TCTAAAAAACTCTAATTTGG+GGG | - | chr3_1:37826440-37826459 | Msa0357100:intron | 25.0% |
| !! | GCAAATGTTTTACTATTTTG+TGG | - | chr3_1:37826823-37826842 | Msa0357100:CDS | 25.0% |
| ! | ATCAATAAAGGGATTTCTTT+GGG | + | chr3_1:37826852-37826871 | None:intergenic | 25.0% |
| !! | TAAAGTTGTCTTATTGTTCT+AGG | - | chr3_1:37826947-37826966 | Msa0357100:intron | 25.0% |
| ! | AATTGTTATAGTCAAGGTAA+GGG | + | chr3_1:37827760-37827779 | None:intergenic | 25.0% |
| ! | AAATTGTTATAGTCAAGGTA+AGG | + | chr3_1:37827761-37827780 | None:intergenic | 25.0% |
| !!! | TCAGACTTTACTTATTTTTC+CGG | - | chr3_1:37827785-37827804 | Msa0357100:intron | 25.0% |
| !! | TTGATATTTTTCACCTAAAC+CGG | + | chr3_1:37827885-37827904 | None:intergenic | 25.0% |
| !! | CTACACTTCACTTATAATTT+TGG | + | chr3_1:37827932-37827951 | None:intergenic | 25.0% |
| ! | ATGAATTGCAATGTTTATAC+AGG | - | chr3_1:37827975-37827994 | Msa0357100:CDS | 25.0% |
| ! | TGAATTGCAATGTTTATACA+GGG | - | chr3_1:37827976-37827995 | Msa0357100:CDS | 25.0% |
| ! | TATGGATTCAATTTAAGCTT+TGG | + | chr3_1:37828038-37828057 | None:intergenic | 25.0% |
| ! | AAGCTTAAATTGAATCCATA+TGG | - | chr3_1:37828038-37828057 | Msa0357100:intron | 25.0% |
| ! | TTAAATTGAATCCATATGGT+TGG | - | chr3_1:37828042-37828061 | Msa0357100:intron | 25.0% |
| !!! | TCATATACTTTTTGAACAAC+AGG | + | chr3_1:37828360-37828379 | None:intergenic | 25.0% |
| !! | GTTGTTCAAAAAGTATATGA+AGG | - | chr3_1:37828360-37828379 | Msa0357100:intron | 25.0% |
| ! | AAACATATACTAGTCAATAC+AGG | + | chr3_1:37828484-37828503 | None:intergenic | 25.0% |
| ! | AAAGTAAAAAAACGTGTGTT+TGG | - | chr3_1:37828518-37828537 | Msa0357100:intron | 25.0% |
| ! | TTACTGGAAACTTAATTAGT+AGG | + | chr3_1:37828690-37828709 | None:intergenic | 25.0% |
| ! | CTTACTTTGATGTTTATATG+TGG | + | chr3_1:37828806-37828825 | None:intergenic | 25.0% |
| ! | ATTATCTTATTCTTATCGTC+AGG | - | chr3_1:37828894-37828913 | Msa0357100:intron | 25.0% |
| ! | TTATCTTATTCTTATCGTCA+GGG | - | chr3_1:37828895-37828914 | Msa0357100:intron | 25.0% |
| !! | CTTTTGGTATAAGATTCATA+TGG | + | chr3_1:37828987-37829006 | None:intergenic | 25.0% |
| !! | TAATTTGCATCTATCTATGA+AGG | - | chr3_1:37829086-37829105 | Msa0357100:intron | 25.0% |
| ! | AAATATAATGTTGCAGTCAT+TGG | - | chr3_1:37829159-37829178 | Msa0357100:intron | 25.0% |
| !! | TTCAAGATGATCAAGAATTT+TGG | - | chr3_1:37829427-37829446 | Msa0357100:intron | 25.0% |
| ! | TTAATCAAGTTAGCACAATT+CGG | + | chr3_1:37829509-37829528 | None:intergenic | 25.0% |
| ! | TTGAAATTATCATGAAGCTA+AGG | - | chr3_1:37829671-37829690 | Msa0357100:intron | 25.0% |
| ! | CAATTTAAATAGGGAACTAA+GGG | - | chr3_1:37829710-37829729 | Msa0357100:intron | 25.0% |
| ! | AATTTAAATAGGGAACTAAG+GGG | - | chr3_1:37829711-37829730 | Msa0357100:intron | 25.0% |
| ! | ATTATGTCACACTCATTATT+TGG | - | chr3_1:37830126-37830145 | Msa0357100:intron | 25.0% |
| ! | TTATGTCACACTCATTATTT+GGG | - | chr3_1:37830127-37830146 | Msa0357100:intron | 25.0% |
| ! | TGCATTGAAATTTTGGACAA+AGG | + | chr3_1:37824616-37824635 | None:intergenic | 30.0% |
| ! | ATTCCTGTGCATTGAAATTT+TGG | + | chr3_1:37824623-37824642 | None:intergenic | 30.0% |
| AGGAATATGCTTCCTTATAT+TGG | - | chr3_1:37824637-37824656 | Msa0357100:CDS | 30.0% | |
| ATTATTGTGAGAAATGGTCA+AGG | + | chr3_1:37824716-37824735 | None:intergenic | 30.0% | |
| !!! | TCATTTTGGTGTTAATCATC+CGG | - | chr3_1:37824789-37824808 | Msa0357100:intron | 30.0% |
| !! | ATAAGGATAAGGGTATTTAG+GGG | - | chr3_1:37825343-37825362 | Msa0357100:intron | 30.0% |
| ! | GTTTGGTTTAAGCGAAATAT+GGG | + | chr3_1:37825517-37825536 | None:intergenic | 30.0% |
| ! | TGTTTGGTTTAAGCGAAATA+TGG | + | chr3_1:37825518-37825537 | None:intergenic | 30.0% |
| GTTAGTAAGATTACTTTCGA+TGG | - | chr3_1:37825618-37825637 | Msa0357100:CDS | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr3_1:37825830-37825849 | Msa0357100:intron | 30.0% | |
| !!! | AACCACTTTTTGACAACTTT+TGG | + | chr3_1:37825902-37825921 | None:intergenic | 30.0% |
| CATTTCTCATATGAAAACAC+AGG | - | chr3_1:37825932-37825951 | Msa0357100:intron | 30.0% | |
| ! | ATCCAGAAATCATAACTTGT+GGG | + | chr3_1:37826158-37826177 | None:intergenic | 30.0% |
| TGAAAAATGTTCCACGATTA+AGG | - | chr3_1:37826629-37826648 | Msa0357100:intron | 30.0% | |
| GAAAAATGTTCCACGATTAA+GGG | - | chr3_1:37826630-37826649 | Msa0357100:intron | 30.0% | |
| TGTGTATTGTGTAGATACAT+AGG | - | chr3_1:37826779-37826798 | Msa0357100:CDS | 30.0% | |
| GATCAATAAAGGGATTTCTT+TGG | + | chr3_1:37826853-37826872 | None:intergenic | 30.0% | |
| !!! | TCAGCATTCTTTTTCGAAAA+TGG | - | chr3_1:37826917-37826936 | Msa0357100:intron | 30.0% |
| ! | TTGTTTTCTTTGCCAATCAA+AGG | + | chr3_1:37827028-37827047 | None:intergenic | 30.0% |
| ! | TGTGAGAGAATTCTTTGAAA+AGG | - | chr3_1:37827048-37827067 | Msa0357100:intron | 30.0% |
| ! | GAATTCTTTGAAAAGGACTA+AGG | - | chr3_1:37827055-37827074 | Msa0357100:intron | 30.0% |
| AAAAAGGACTACTTATTACC+TGG | + | chr3_1:37827246-37827265 | None:intergenic | 30.0% | |
| CAATGAAAACACCAATTGTT+AGG | - | chr3_1:37827500-37827519 | Msa0357100:intron | 30.0% | |
| !!! | ATCTAATGGACTAGTCTTTT+GGG | + | chr3_1:37827551-37827570 | None:intergenic | 30.0% |
| ! | ACACTTTTATCTACTCGATA+TGG | - | chr3_1:37827603-37827622 | Msa0357100:intron | 30.0% |
| ! | CACTTTTATCTACTCGATAT+GGG | - | chr3_1:37827604-37827623 | Msa0357100:intron | 30.0% |
| TCCTAACAAGATGTCAAAAT+AGG | - | chr3_1:37827629-37827648 | Msa0357100:intron | 30.0% | |
| CCTAACAAGATGTCAAAATA+GGG | - | chr3_1:37827630-37827649 | Msa0357100:intron | 30.0% | |
| TCACATATACTCATGTTAGT+TGG | - | chr3_1:37827684-37827703 | Msa0357100:intron | 30.0% | |
| !!! | TGAGTGAGTTTTTTAAGACT+TGG | + | chr3_1:37827848-37827867 | None:intergenic | 30.0% |
| ! | ACTCAACAAGAATTTTGTAC+CGG | - | chr3_1:37827863-37827882 | Msa0357100:intron | 30.0% |
| TAATCGTCATCCATTGTTAA+TGG | + | chr3_1:37828002-37828021 | None:intergenic | 30.0% | |
| !! | GATTCAATTTAAGCTTTGGA+AGG | + | chr3_1:37828034-37828053 | None:intergenic | 30.0% |
| ATGTACATAGATATACCAGT+TGG | - | chr3_1:37828083-37828102 | Msa0357100:intron | 30.0% | |
| TGTACATAGATATACCAGTT+GGG | - | chr3_1:37828084-37828103 | Msa0357100:intron | 30.0% | |
| ATATTCTACTTTCAATGCAG+TGG | - | chr3_1:37828259-37828278 | Msa0357100:intron | 30.0% | |
| ! | AATGGATTTGAGCTAAACTT+TGG | + | chr3_1:37828297-37828316 | None:intergenic | 30.0% |
| ! | AGCTCAAATCCATTTTACAT+AGG | - | chr3_1:37828303-37828322 | Msa0357100:intron | 30.0% |
| ! | TCAAATCCATTTTACATAGG+TGG | - | chr3_1:37828306-37828325 | Msa0357100:intron | 30.0% |
| TCATATTCAGGATTTACTAC+CGG | - | chr3_1:37828333-37828352 | Msa0357100:intron | 30.0% | |
| TATGAAGGTAAACACTAACT+AGG | - | chr3_1:37828375-37828394 | Msa0357100:intron | 30.0% | |
| !! | GGACTTCTAAAATCTTGTTT+CGG | + | chr3_1:37828432-37828451 | None:intergenic | 30.0% |
| !!! | TGCTAGCTTTTCAAAAACTA+CGG | - | chr3_1:37828555-37828574 | Msa0357100:intron | 30.0% |
| TCACGTTTATATGCTTATAC+AGG | + | chr3_1:37828948-37828967 | None:intergenic | 30.0% | |
| TATACCAAAAGAACTCTATG+AGG | - | chr3_1:37828996-37829015 | Msa0357100:intron | 30.0% | |
| TCATTGGAGGAAAATTGTAA+GGG | - | chr3_1:37829175-37829194 | Msa0357100:intron | 30.0% | |
| !!! | AGATTTTGAAGCTTATTCTG+AGG | - | chr3_1:37829240-37829259 | Msa0357100:intron | 30.0% |
| TGCATTCATAGTAATGCATT+TGG | - | chr3_1:37829279-37829298 | Msa0357100:intron | 30.0% | |
| AATTCTTGATCATCTTGAAC+AGG | + | chr3_1:37829426-37829445 | None:intergenic | 30.0% | |
| CCTTAGTTCCCTATTTAAAT+TGG | + | chr3_1:37829712-37829731 | None:intergenic | 30.0% | |
| CCAATTTAAATAGGGAACTA+AGG | - | chr3_1:37829709-37829728 | Msa0357100:intron | 30.0% | |
| ATTTAAATAGGGAACTAAGG+GGG | - | chr3_1:37829712-37829731 | Msa0357100:intron | 30.0% | |
| !!! | GACACAAACGCATTTTAATT+TGG | - | chr3_1:37830066-37830085 | Msa0357100:intron | 30.0% |
| !! | GAAATTTTGGACAAAGGTAC+TGG | + | chr3_1:37824610-37824629 | None:intergenic | 35.0% |
| TGTCCAAAATTTCAATGCAC+AGG | - | chr3_1:37824617-37824636 | Msa0357100:CDS | 35.0% | |
| GGATAAGAATTCTTCTACTC+TGG | - | chr3_1:37824868-37824887 | Msa0357100:intron | 35.0% | |
| ! | CGAATTCAAGTTCTCCTATT+TGG | - | chr3_1:37824894-37824913 | Msa0357100:intron | 35.0% |
| ! | ATTCAAGTTCTCCTATTTGG+TGG | - | chr3_1:37824897-37824916 | Msa0357100:intron | 35.0% |
| GTTAATGAACTCCACCAAAT+AGG | + | chr3_1:37824911-37824930 | None:intergenic | 35.0% | |
| AGATGTAGCTGTATTGTGTT+AGG | - | chr3_1:37824990-37825009 | Msa0357100:intron | 35.0% | |
| TTTAATGCTTCTGCCATTCA+TGG | - | chr3_1:37825016-37825035 | Msa0357100:CDS | 35.0% | |
| TCTGCCATTCATGGTTTATT+CGG | - | chr3_1:37825025-37825044 | Msa0357100:CDS | 35.0% | |
| TCTATTGTCAAGAAACTTCC+TGG | - | chr3_1:37825050-37825069 | Msa0357100:CDS | 35.0% | |
| !!! | AAGAAACTTCCTGGTTTTGA+TGG | - | chr3_1:37825059-37825078 | Msa0357100:CDS | 35.0% |
| !!! | AGAAACTTCCTGGTTTTGAT+GGG | - | chr3_1:37825060-37825079 | Msa0357100:CDS | 35.0% |
| TTCCATTCAAGCTTGAAACA+GGG | - | chr3_1:37825087-37825106 | Msa0357100:CDS | 35.0% | |
| ! | AAGGTGTTTAAATATGGGGA+TGG | - | chr3_1:37825246-37825265 | Msa0357100:CDS | 35.0% |
| CAATCATTGCTGTATTGTTG+TGG | - | chr3_1:37825289-37825308 | Msa0357100:intron | 35.0% | |
| ATCTGTGAAGAAGGAAAAAG+TGG | - | chr3_1:37825409-37825428 | Msa0357100:CDS | 35.0% | |
| GAGCACTCTAACATTATGTT+TGG | + | chr3_1:37825534-37825553 | None:intergenic | 35.0% | |
| TCAGCAAAGTTGTCATCAAA+TGG | + | chr3_1:37825779-37825798 | None:intergenic | 35.0% | |
| GTCCAAAAGTTGTCAAAAAG+TGG | - | chr3_1:37825897-37825916 | Msa0357100:CDS | 35.0% | |
| ATCCCACAAGTTATGATTTC+TGG | - | chr3_1:37826153-37826172 | Msa0357100:intron | 35.0% | |
| GATCCAGAAATCATAACTTG+TGG | + | chr3_1:37826159-37826178 | None:intergenic | 35.0% | |
| ! | CTTTGTTATGTCCATTTGGT+CGG | + | chr3_1:37826547-37826566 | None:intergenic | 35.0% |
| ! | ATGCCTTTGTTATGTCCATT+TGG | + | chr3_1:37826551-37826570 | None:intergenic | 35.0% |
| ACACAATACACAGCCATAAT+TGG | + | chr3_1:37826771-37826790 | None:intergenic | 35.0% | |
| ATTGTGTAGATACATAGGAG+TGG | - | chr3_1:37826784-37826803 | Msa0357100:CDS | 35.0% | |
| TTGTGTAGATACATAGGAGT+GGG | - | chr3_1:37826785-37826804 | Msa0357100:CDS | 35.0% | |
| CCAACGAACCAAAGTAAAAT+TGG | + | chr3_1:37826875-37826894 | None:intergenic | 35.0% | |
| !! | CCAATTTTACTTTGGTTCGT+TGG | - | chr3_1:37826872-37826891 | Msa0357100:intron | 35.0% |
| !! | ATTTTACTTTGGTTCGTTGG+AGG | - | chr3_1:37826875-37826894 | Msa0357100:intron | 35.0% |
| ! | GTTCTAGGTTGTGATTAAGA+AGG | - | chr3_1:37826962-37826981 | Msa0357100:intron | 35.0% |
| CATTCACATGTTCCTTTGAT+TGG | - | chr3_1:37827013-37827032 | Msa0357100:intron | 35.0% | |
| CCAATAAAGTGAATGTCGTA+CGG | + | chr3_1:37827201-37827220 | None:intergenic | 35.0% | |
| TACCTGGATTAAGTGATAGT+GGG | + | chr3_1:37827230-37827249 | None:intergenic | 35.0% | |
| TTACCTGGATTAAGTGATAG+TGG | + | chr3_1:37827231-37827250 | None:intergenic | 35.0% | |
| TTGAGAGTTGGACAACAAAA+AGG | + | chr3_1:37827262-37827281 | None:intergenic | 35.0% | |
| TGTTGTCCAACTCTCAATAT+TGG | - | chr3_1:37827265-37827284 | Msa0357100:intron | 35.0% | |
| TCATAGCCAATATTGAGAGT+TGG | + | chr3_1:37827274-37827293 | None:intergenic | 35.0% | |
| GGCTATGATGATAAGTCATT+AGG | - | chr3_1:37827286-37827305 | Msa0357100:intron | 35.0% | |
| TCTACATCGAGTGATAAAAG+TGG | + | chr3_1:37827345-37827364 | None:intergenic | 35.0% | |
| CAGTACGACTTTCACTTTAT+TGG | - | chr3_1:37827416-37827435 | Msa0357100:intron | 35.0% | |
| TACCTGGATTAAGTGATAGT+GGG | + | chr3_1:37827230-37827249 | None:intergenic | 35.0% | |
| TTACCTGGATTAAGTGATAG+TGG | + | chr3_1:37827231-37827250 | None:intergenic | 35.0% | |
| ! | GTGTTTTCATTGAGAGTAGT+TGG | + | chr3_1:37827492-37827511 | None:intergenic | 35.0% |
| TGGGATTAAGTCCTAACAAT+TGG | + | chr3_1:37827514-37827533 | None:intergenic | 35.0% | |
| !!! | CATCTAATGGACTAGTCTTT+TGG | + | chr3_1:37827552-37827571 | None:intergenic | 35.0% |
| !!! | CCCTATTTTGACATCTTGTT+AGG | + | chr3_1:37827633-37827652 | None:intergenic | 35.0% |
| AATGGAAACAACTCTAGTCA+TGG | + | chr3_1:37827728-37827747 | None:intergenic | 35.0% | |
| ! | AGGTAAGGGTATATGTCAAA+TGG | + | chr3_1:37827746-37827765 | None:intergenic | 35.0% |
| !!! | TTTTTAAGACTTGGTTCCCA+AGG | + | chr3_1:37827839-37827858 | None:intergenic | 35.0% |
| !!! | CAAGAATTTTGTACCGGTTT+AGG | - | chr3_1:37827869-37827888 | Msa0357100:intron | 35.0% |
| TTATACAGGGCCATTAACAA+TGG | - | chr3_1:37827989-37828008 | Msa0357100:CDS | 35.0% | |
| AACATATGTGTCCAACCATA+TGG | + | chr3_1:37828056-37828075 | None:intergenic | 35.0% | |
| TCTTACTCAGAAACACAAGA+AGG | - | chr3_1:37828116-37828135 | Msa0357100:intron | 35.0% | |
| ! | AATCCATTTTACATAGGTGG+TGG | - | chr3_1:37828309-37828328 | Msa0357100:intron | 35.0% |
| !! | TACTTTTTGAACAACAGGAC+CGG | + | chr3_1:37828355-37828374 | None:intergenic | 35.0% |
| ACTAGGCGAAAATGCAATAT+CGG | - | chr3_1:37828392-37828411 | Msa0357100:intron | 35.0% | |
| AGTCCTGAAAGTTGTGAAAT+TGG | - | chr3_1:37828447-37828466 | Msa0357100:intron | 35.0% | |
| GTCCTGAAAGTTGTGAAATT+GGG | - | chr3_1:37828448-37828467 | Msa0357100:intron | 35.0% | |
| CTAGTATATGTTTGCTCTAG+TGG | - | chr3_1:37828491-37828510 | Msa0357100:intron | 35.0% | |
| !! | GTTTTTGAAAAGCTAGCAGT+TGG | + | chr3_1:37828553-37828572 | None:intergenic | 35.0% |
| ! | AAACTACGGTAAAAGTGCAT+AGG | - | chr3_1:37828569-37828588 | Msa0357100:intron | 35.0% |
| ! | AACTACGGTAAAAGTGCATA+GGG | - | chr3_1:37828570-37828589 | Msa0357100:intron | 35.0% |
| !!! | TTAGACTTTTAGAGCGTGTT+TGG | + | chr3_1:37828624-37828643 | None:intergenic | 35.0% |
| TGAATTCTTGCTTGAATTGC+AGG | - | chr3_1:37828761-37828780 | Msa0357100:intron | 35.0% | |
| ! | GTAACCTCATAGAGTTCTTT+TGG | + | chr3_1:37829003-37829022 | None:intergenic | 35.0% |
| TATAATGTTGCAGTCATTGG+AGG | - | chr3_1:37829162-37829181 | Msa0357100:intron | 35.0% | |
| GTCATTGGAGGAAAATTGTA+AGG | - | chr3_1:37829174-37829193 | Msa0357100:intron | 35.0% | |
| ! | GAGACACACTTTGTGTTATT+TGG | + | chr3_1:37829220-37829239 | None:intergenic | 35.0% |
| ATCGAACTAGCTGCAAAAAA+AGG | + | chr3_1:37829332-37829351 | None:intergenic | 35.0% | |
| ! | TTTGAGATGCAACAAGACTT+TGG | - | chr3_1:37829739-37829758 | Msa0357100:intron | 35.0% |
| ATAAATGAGAGCTTGGATGT+TGG | + | chr3_1:37829819-37829838 | None:intergenic | 35.0% | |
| AACATCCAAGCTCTCATTTA+TGG | - | chr3_1:37829818-37829837 | Msa0357100:CDS | 35.0% | |
| ACATCCAAGCTCTCATTTAT+GGG | - | chr3_1:37829819-37829838 | Msa0357100:CDS | 35.0% | |
| ! | CAGTGATATATAGGTTTGCT+TGG | + | chr3_1:37829869-37829888 | None:intergenic | 35.0% |
| TTGAAGCAGCAGTGATATAT+AGG | + | chr3_1:37829878-37829897 | None:intergenic | 35.0% | |
| ACATGAGCACACATGATAAA+TGG | - | chr3_1:37830222-37830241 | Msa0357100:five_prime_UTR | 35.0% | |
| ATGGTCAAGGTTAAGGTTAC+TGG | + | chr3_1:37824703-37824722 | None:intergenic | 40.0% | |
| GTGAGAAATGGTCAAGGTTA+AGG | + | chr3_1:37824710-37824729 | None:intergenic | 40.0% | |
| CGGTTATCGAGATTTATGTC+TGG | - | chr3_1:37824830-37824849 | Msa0357100:intron | 40.0% | |
| ! | GTCTGGAGTTGAATGAAGTT+TGG | - | chr3_1:37824847-37824866 | Msa0357100:intron | 40.0% |
| CTGCCATTCATGGTTTATTC+GGG | - | chr3_1:37825026-37825045 | Msa0357100:CDS | 40.0% | |
| GAACCCGAATAAACCATGAA+TGG | + | chr3_1:37825032-37825051 | None:intergenic | 40.0% | |
| !!! | GAAACTTCCTGGTTTTGATG+GGG | - | chr3_1:37825061-37825080 | Msa0357100:CDS | 40.0% |
| CTTCCATTCAAGCTTGAAAC+AGG | - | chr3_1:37825086-37825105 | Msa0357100:CDS | 40.0% | |
| ATTGCTGTATTGTTGTGGTG+TGG | - | chr3_1:37825294-37825313 | Msa0357100:intron | 40.0% | |
| TCTTCGCATATCTGTGAAGA+AGG | - | chr3_1:37825400-37825419 | Msa0357100:CDS | 40.0% | |
| TGTGAAGAAGGAAAAAGTGG+TGG | - | chr3_1:37825412-37825431 | Msa0357100:CDS | 40.0% | |
| GTGAAGAAGGAAAAAGTGGT+GGG | - | chr3_1:37825413-37825432 | Msa0357100:CDS | 40.0% | |
| AAGAGAGATGGGATTATGGT+GGG | + | chr3_1:37825440-37825459 | None:intergenic | 40.0% | |
| AAGGAAGAGAGATGGGATTA+TGG | + | chr3_1:37825444-37825463 | None:intergenic | 40.0% | |
| AAGCGAAATATGGGAGAAGT+TGG | + | chr3_1:37825508-37825527 | None:intergenic | 40.0% | |
| AGAGAGAAAAAGGAAGAGAG+AGG | - | chr3_1:37825840-37825859 | Msa0357100:CDS | 40.0% | |
| GTGTGGTTCAAGAAAGAGAA+AGG | - | chr3_1:37826238-37826257 | Msa0357100:intron | 40.0% | |
| !! | ACATGTTTGGTTCTCAAGAG+AGG | - | chr3_1:37826289-37826308 | Msa0357100:intron | 40.0% |
| !! | CATGTTTGGTTCTCAAGAGA+GGG | - | chr3_1:37826290-37826309 | Msa0357100:intron | 40.0% |
| !! | ATGTTTGGTTCTCAAGAGAG+GGG | - | chr3_1:37826291-37826310 | Msa0357100:intron | 40.0% |
| CGACCAAATGGACATAACAA+AGG | - | chr3_1:37826545-37826564 | Msa0357100:CDS | 40.0% | |
| CCGTACGACATTCACTTTAT+TGG | - | chr3_1:37827198-37827217 | Msa0357100:intron | 40.0% | |
| TACGTCTTCATGGCAATGTT+AGG | + | chr3_1:37827371-37827390 | None:intergenic | 40.0% | |
| TTAGGAGTTCTACGTCTTCA+TGG | + | chr3_1:37827381-37827400 | None:intergenic | 40.0% | |
| AGAAAGGACTACGTATTACC+TGG | + | chr3_1:37827464-37827483 | None:intergenic | 40.0% | |
| AGAGTAGTTGGACAACAGAA+AGG | + | chr3_1:37827480-37827499 | None:intergenic | 40.0% | |
| !!! | ATGGACTAGTCTTTTGGGTT+AGG | + | chr3_1:37827546-37827565 | None:intergenic | 40.0% |
| CATGAGACTCTCTCATCTAA+TGG | + | chr3_1:37827565-37827584 | None:intergenic | 40.0% | |
| GGAAAAAGGACCTGGTAATT+TGG | + | chr3_1:37827818-37827837 | None:intergenic | 40.0% | |
| ! | ATTACCAGGTCCTTTTTCCT+TGG | - | chr3_1:37827819-37827838 | Msa0357100:intron | 40.0% |
| ! | TTACCAGGTCCTTTTTCCTT+GGG | - | chr3_1:37827820-37827839 | Msa0357100:intron | 40.0% |
| ACAATGGATGACGATTACAG+TGG | - | chr3_1:37828005-37828024 | Msa0357100:CDS | 40.0% | |
| ATAGATATACCAGTTGGGAC+TGG | - | chr3_1:37828089-37828108 | Msa0357100:intron | 40.0% | |
| TAAGAAAAACCAGTCCCAAC+TGG | + | chr3_1:37828101-37828120 | None:intergenic | 40.0% | |
| CTCCCAATTTCACAACTTTC+AGG | + | chr3_1:37828453-37828472 | None:intergenic | 40.0% | |
| ! | TTAGAGCGTGTTTGGTTTAG+CGG | + | chr3_1:37828616-37828635 | None:intergenic | 40.0% |
| ! | CGAATTATCTGGTTTACAGC+AGG | + | chr3_1:37829399-37829418 | None:intergenic | 40.0% |
| GAACAGGTTGTCGAATTATC+TGG | + | chr3_1:37829410-37829429 | None:intergenic | 40.0% | |
| AAACGATGAAAATGTGCGCA+AGG | - | chr3_1:37829580-37829599 | Msa0357100:intron | 40.0% | |
| GCGATAATATTCTACAGCAC+TGG | + | chr3_1:37829783-37829802 | None:intergenic | 40.0% | |
| GTTACCCATAAATGAGAGCT+TGG | + | chr3_1:37829826-37829845 | None:intergenic | 40.0% | |
| ! | TACAGGTGTTAGTTTCGTGT+TGG | + | chr3_1:37829949-37829968 | None:intergenic | 40.0% |
| ! | GTGTTAGTTTCGTGTTCTAC+AGG | + | chr3_1:37829966-37829985 | None:intergenic | 40.0% |
| CAAGATTGTGTACTCAGTTG+TGG | + | chr3_1:37830188-37830207 | None:intergenic | 40.0% | |
| CACAACTGAGTACACAATCT+TGG | - | chr3_1:37830186-37830205 | Msa0357100:five_prime_UTR | 40.0% | |
| TTTGTTGAAGGTCAAGTAGC+CGG | - | chr3_1:37830254-37830273 | Msa0357100:five_prime_UTR | 40.0% | |
| TCTTCAGTTGGGTAGTGTGA+TGG | - | chr3_1:37824962-37824981 | Msa0357100:intron | 45.0% | |
| CTTCAGTTGGGTAGTGTGAT+GGG | - | chr3_1:37824963-37824982 | Msa0357100:intron | 45.0% | |
| CACCCTGTTTCAAGCTTGAA+TGG | + | chr3_1:37825092-37825111 | None:intergenic | 45.0% | |
| GAAGAGAGATGGGATTATGG+TGG | + | chr3_1:37825441-37825460 | None:intergenic | 45.0% | |
| TATGGGAGAAGTTGGAGAGA+TGG | + | chr3_1:37825500-37825519 | None:intergenic | 45.0% | |
| ! | ATTTGGTCGGAGGATTTTGG+AGG | + | chr3_1:37826534-37826553 | None:intergenic | 45.0% |
| TCCAAAATCCTCCGACCAAA+TGG | - | chr3_1:37826533-37826552 | Msa0357100:CDS | 45.0% | |
| ! | TCCATTTGGTCGGAGGATTT+TGG | + | chr3_1:37826537-37826556 | None:intergenic | 45.0% |
| TGTTATGTCCATTTGGTCGG+AGG | + | chr3_1:37826544-37826563 | None:intergenic | 45.0% | |
| TGTTCCACGATTAAGGGAGT+AGG | - | chr3_1:37826636-37826655 | Msa0357100:intron | 45.0% | |
| GTTCCACGATTAAGGGAGTA+GGG | - | chr3_1:37826637-37826656 | Msa0357100:intron | 45.0% | |
| ATACCCTACTCCCTTAATCG+TGG | + | chr3_1:37826643-37826662 | None:intergenic | 45.0% | |
| AGATACATAGGAGTGGGAGA+AGG | - | chr3_1:37826791-37826810 | Msa0357100:CDS | 45.0% | |
| CATTAGGTGATAGAGCCTCA+TGG | - | chr3_1:37827112-37827131 | Msa0357100:intron | 45.0% | |
| GACGTGATACATATGCCATG+AGG | + | chr3_1:37827130-37827149 | None:intergenic | 45.0% | |
| CACCCACTATCACTTAATCC+AGG | - | chr3_1:37827225-37827244 | Msa0357100:intron | 45.0% | |
| CATTAGGTGATAGAGCCTCA+TGG | - | chr3_1:37827112-37827131 | Msa0357100:intron | 45.0% | |
| CTGCTCTTCATGGCAATGTT+AGG | + | chr3_1:37827399-37827418 | None:intergenic | 45.0% | |
| GAAAGTCGTACTGCTCTTCA+TGG | + | chr3_1:37827409-37827428 | None:intergenic | 45.0% | |
| CACCCACTATCACTTAATCC+AGG | - | chr3_1:37827225-37827244 | Msa0357100:intron | 45.0% | |
| ! | TTGGGTTAGGCTCTGTTCAT+GGG | + | chr3_1:37827533-37827552 | None:intergenic | 45.0% |
| ! | TTTGGGTTAGGCTCTGTTCA+TGG | + | chr3_1:37827534-37827553 | None:intergenic | 45.0% |
| ! | GACTTGGTTCCCAAGGAAAA+AGG | + | chr3_1:37827832-37827851 | None:intergenic | 45.0% |
| ACTATAGCAGTGACACACTG+TGG | - | chr3_1:37828141-37828160 | Msa0357100:intron | 45.0% | |
| CTATAGCAGTGACACACTGT+GGG | - | chr3_1:37828142-37828161 | Msa0357100:intron | 45.0% | |
| GAGCCACCACCTATGTAAAA+TGG | + | chr3_1:37828315-37828334 | None:intergenic | 45.0% | |
| ! | ATAGGTGGTGGCTCATATTC+AGG | - | chr3_1:37828321-37828340 | Msa0357100:intron | 45.0% |
| AAGCTAGCAGTTGGAGAGTT+TGG | + | chr3_1:37828544-37828563 | None:intergenic | 45.0% | |
| GCTTATACAGGTCAACAGCA+GGG | + | chr3_1:37828936-37828955 | None:intergenic | 45.0% | |
| TGCTTATACAGGTCAACAGC+AGG | + | chr3_1:37828937-37828956 | None:intergenic | 45.0% | |
| CACATGATAAATGGCGTGCA+TGG | - | chr3_1:37830231-37830250 | Msa0357100:five_prime_UTR | 45.0% | |
| TTGTTGAAGGTCAAGTAGCC+GGG | - | chr3_1:37830255-37830274 | Msa0357100:five_prime_UTR | 45.0% | |
| TCATCCGGTTCTCAGCAGAA+AGG | - | chr3_1:37824804-37824823 | Msa0357100:intron | 50.0% | |
| CATCCGGTTCTCAGCAGAAA+GGG | - | chr3_1:37824805-37824824 | Msa0357100:intron | 50.0% | |
| !! | AGTTGGGTAGTGTGATGGGT+TGG | - | chr3_1:37824967-37824986 | Msa0357100:intron | 50.0% |
| GGAAGTTCCCCATCAAAACC+AGG | + | chr3_1:37825071-37825090 | None:intergenic | 50.0% | |
| TGGATCCGTCCTTGATGTGA+GGG | - | chr3_1:37826173-37826192 | Msa0357100:intron | 50.0% | |
| !! | TTTGGTTCTCAAGAGAGGGG+AGG | - | chr3_1:37826294-37826313 | Msa0357100:intron | 50.0% |
| TGGGGGAAGCAATAAACGAG+TGG | - | chr3_1:37826457-37826476 | Msa0357100:intron | 50.0% | |
| !! | GGATTTTGGAGGAGTGAGGA+GGG | + | chr3_1:37826523-37826542 | None:intergenic | 50.0% |
| !! | AGGATTTTGGAGGAGTGAGG+AGG | + | chr3_1:37826524-37826543 | None:intergenic | 50.0% |
| ! | GCTGAAAGTGCAGAACATCC+TGG | + | chr3_1:37826902-37826921 | None:intergenic | 50.0% |
| CGGCTCTTCATGGCAATGTT+AGG | + | chr3_1:37827181-37827200 | None:intergenic | 50.0% | |
| GAATGTCGTACGGCTCTTCA+TGG | + | chr3_1:37827191-37827210 | None:intergenic | 50.0% | |
| GACGTGATACTCATGCCATG+AGG | + | chr3_1:37827320-37827339 | None:intergenic | 50.0% | |
| ! | CTGGTAATTTGGAGTCTGGC+CGG | + | chr3_1:37827807-37827826 | None:intergenic | 50.0% |
| ! | GGACCTGGTAATTTGGAGTC+TGG | + | chr3_1:37827811-37827830 | None:intergenic | 50.0% |
| GTTCCCAAGGAAAAAGGACC+TGG | + | chr3_1:37827826-37827845 | None:intergenic | 50.0% | |
| ! | TGTTTGGTTTAGCGGCAAGC+AGG | + | chr3_1:37828608-37828627 | None:intergenic | 50.0% |
| ! | GCAGGTGTTGTGATACAGAG+AGG | + | chr3_1:37829381-37829400 | None:intergenic | 50.0% |
| CAAGGCTCTTCATGTCAGAG+AGG | - | chr3_1:37829598-37829617 | Msa0357100:intron | 50.0% | |
| !! | TGGCGTGCATGGTTTGTTGA+AGG | - | chr3_1:37830242-37830261 | Msa0357100:five_prime_UTR | 50.0% |
| GAGCCCTTTCTGCTGAGAAC+CGG | + | chr3_1:37824811-37824830 | None:intergenic | 55.0% | |
| GGTTCTCAGCAGAAAGGGCT+CGG | - | chr3_1:37824810-37824829 | Msa0357100:intron | 55.0% | |
| CTGGATCCGTCCTTGATGTG+AGG | - | chr3_1:37826172-37826191 | Msa0357100:intron | 55.0% | |
| GGATCCGTCCTTGATGTGAG+GGG | - | chr3_1:37826174-37826193 | Msa0357100:intron | 55.0% | |
| !! | CGGAGGATTTTGGAGGAGTG+AGG | + | chr3_1:37826527-37826546 | None:intergenic | 55.0% |
| AGGAGTGGGAGAAGGAGCAA+AGG | - | chr3_1:37826799-37826818 | Msa0357100:CDS | 55.0% | |
| ! | CTTTGGTTCGTTGGAGGTCC+AGG | - | chr3_1:37826881-37826900 | Msa0357100:intron | 55.0% |
| CGGCCAGACTCCAAATTACC+AGG | - | chr3_1:37827805-37827824 | Msa0357100:intron | 55.0% | |
| TAGCAGTGACACACTGTGGG+TGG | - | chr3_1:37828145-37828164 | Msa0357100:intron | 55.0% | |
| GAGAGCTTGGATGTTGGCGT+TGG | + | chr3_1:37829813-37829832 | None:intergenic | 55.0% | |
| CCGTCCCCTCACATCAAGGA+CGG | + | chr3_1:37826181-37826200 | None:intergenic | 60.0% | |
| CCGTCCTTGATGTGAGGGGA+CGG | - | chr3_1:37826178-37826197 | Msa0357100:intron | 60.0% | |
| CGTCCTTGATGTGAGGGGAC+GGG | - | chr3_1:37826179-37826198 | Msa0357100:intron | 60.0% | |
| TCTCCCGTCCCCTCACATCA+AGG | + | chr3_1:37826185-37826204 | None:intergenic | 60.0% | |
| TTGATGTGAGGGGACGGGAG+AGG | - | chr3_1:37826184-37826203 | Msa0357100:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 37824568 | 37830280 | 37824568 | ID=Msa0357100;Name=Msa0357100 |
| chr3_1 | mRNA | 37824568 | 37830280 | 37824568 | ID=Msa0357100-mRNA-1;Parent=Msa0357100;Name=Msa0357100-mRNA-1;_AED=0.17;_eAED=0.17;_QI=167|1|0.92|1|0.83|0.76|13|0|407 |
| chr3_1 | exon | 37824568 | 37824685 | 37824568 | ID=Msa0357100-mRNA-1:exon:6907;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37825008 | 37825126 | 37825008 | ID=Msa0357100-mRNA-1:exon:6906;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37825229 | 37825300 | 37825229 | ID=Msa0357100-mRNA-1:exon:6905;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37825393 | 37825506 | 37825393 | ID=Msa0357100-mRNA-1:exon:6904;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37825587 | 37825673 | 37825587 | ID=Msa0357100-mRNA-1:exon:6903;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37825831 | 37825932 | 37825831 | ID=Msa0357100-mRNA-1:exon:6902;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37826028 | 37826065 | 37826028 | ID=Msa0357100-mRNA-1:exon:6901;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37826467 | 37826569 | 37826467 | ID=Msa0357100-mRNA-1:exon:6900;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37826655 | 37826851 | 37826655 | ID=Msa0357100-mRNA-1:exon:6899;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37827910 | 37828055 | 37827910 | ID=Msa0357100-mRNA-1:exon:6898;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37829740 | 37829871 | 37829740 | ID=Msa0357100-mRNA-1:exon:6897;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37830097 | 37830140 | 37830097 | ID=Msa0357100-mRNA-1:exon:6896;Parent=Msa0357100-mRNA-1 |
| chr3_1 | exon | 37830162 | 37830280 | 37830162 | ID=Msa0357100-mRNA-1:exon:6895;Parent=Msa0357100-mRNA-1 |
| chr3_1 | five_prime_UTR | 37830162 | 37830280 | 37830162 | ID=Msa0357100-mRNA-1:five_prime_utr;Parent=Msa0357100-mRNA-1 |
| chr3_1 | five_prime_UTR | 37830097 | 37830140 | 37830097 | ID=Msa0357100-mRNA-1:five_prime_utr;Parent=Msa0357100-mRNA-1 |
| chr3_1 | five_prime_UTR | 37829868 | 37829871 | 37829868 | ID=Msa0357100-mRNA-1:five_prime_utr;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37829740 | 37829867 | 37829740 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37827910 | 37828055 | 37827910 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37826655 | 37826851 | 37826655 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37826467 | 37826569 | 37826467 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37826028 | 37826065 | 37826028 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37825831 | 37825932 | 37825831 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37825587 | 37825673 | 37825587 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37825393 | 37825506 | 37825393 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37825229 | 37825300 | 37825229 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37825008 | 37825126 | 37825008 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| chr3_1 | CDS | 37824568 | 37824685 | 37824568 | ID=Msa0357100-mRNA-1:cds;Parent=Msa0357100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
