AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0782970

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782970 MtrunA17_Chr5g0447641 91.401 721 23 2 1 689 1 714 0.0 1337
Msa0782970 MtrunA17_Chr5g0447641 97.921 433 9 0 689 1121 784 1216 0.0 884
Msa0782970 MtrunA17_Chr3g0122391 50.104 966 345 15 266 1117 82 1024 0.0 886
Msa0782970 MtrunA17_Chr8g0377481 48.410 975 371 13 250 1117 18 967 0.0 877
Msa0782970 MtrunA17_Chr8g0392301 53.280 503 174 5 270 725 41 529 7.48e-151 478
Msa0782970 MtrunA17_Chr8g0392301 48.206 446 194 9 698 1117 560 994 2.16e-118 390
Msa0782970 MtrunA17_Chr2g0311191 41.071 280 94 6 427 703 21 232 1.32e-47 170
Msa0782970 MtrunA17_Chr5g0405701 29.210 291 152 5 547 783 464 754 1.80e-22 104
Msa0782970 MtrunA17_Chr5g0405701 30.994 171 68 4 961 1105 1038 1184 2.89e-13 74.7
Msa0782970 MtrunA17_Chr8g0371601 25.195 512 280 16 547 971 426 921 2.74e-22 104
Msa0782970 MtrunA17_Chr8g0371601 31.944 144 61 4 980 1105 1030 1154 4.82e-12 70.9
Msa0782970 MtrunA17_Chr4g0013831 25.867 375 223 8 586 910 338 707 5.89e-19 92.8
Msa0782970 MtrunA17_Chr7g0269631 30.894 246 135 7 586 797 338 582 2.82e-16 84.0
Msa0782970 MtrunA17_Chr3g0136601 35.115 131 77 2 980 1103 805 934 4.38e-15 80.5
Msa0782970 MtrunA17_Chr3g0136601 47.436 78 40 1 721 797 569 646 1.04e-12 72.8
Msa0782970 MtrunA17_Chr3g0136601 39.024 82 50 0 595 676 373 454 6.09e-11 67.0
Msa0782970 MtrunA17_Chr1g0197591 33.333 177 88 5 944 1113 892 1045 5.46e-14 77.0
Msa0782970 MtrunA17_Chr1g0150511 34.109 129 78 2 981 1103 870 997 4.69e-13 73.9
Msa0782970 MtrunA17_Chr1g0150511 47.945 73 38 0 725 797 609 681 5.28e-13 73.9
Msa0782970 MtrunA17_Chr1g0150511 39.024 82 50 0 595 676 379 460 3.36e-11 67.8
Msa0782970 MtrunA17_Chr7g0274831 34.127 126 58 4 981 1103 641 744 3.88e-11 67.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0782970 AT5G35750.1 51.765 1190 416 19 46 1120 30 1176 0.0 1083
Msa0782970 AT1G27320.1 51.175 936 344 12 283 1118 107 1029 0.0 895
Msa0782970 AT2G01830.5 52.372 506 177 7 269 724 118 609 9.05e-154 488
Msa0782970 AT2G01830.5 48.090 445 195 10 693 1117 632 1060 2.03e-114 382
Msa0782970 AT2G01830.1 52.372 506 177 7 269 724 106 597 1.06e-153 487
Msa0782970 AT2G01830.1 48.090 445 195 10 693 1117 620 1048 2.54e-114 381
Msa0782970 AT2G01830.4 52.372 506 177 7 269 724 106 597 1.06e-153 487
Msa0782970 AT2G01830.4 48.090 445 195 10 693 1117 620 1048 2.54e-114 381
Msa0782970 AT2G01830.6 52.372 506 177 7 269 724 106 597 1.06e-153 487
Msa0782970 AT2G01830.6 48.090 445 195 10 693 1117 620 1048 2.54e-114 381
Msa0782970 AT2G01830.3 52.372 506 177 7 269 724 106 597 1.06e-153 487
Msa0782970 AT2G01830.3 48.090 445 195 10 693 1117 620 1048 2.54e-114 381
Msa0782970 AT2G01830.2 52.372 506 177 7 269 724 129 620 1.34e-153 487
Msa0782970 AT2G01830.2 48.090 445 195 10 693 1117 643 1071 2.52e-114 382
Msa0782970 AT5G10720.1 33.200 250 130 5 595 807 369 618 4.57e-26 116
Msa0782970 AT5G10720.1 34.615 130 78 3 980 1103 779 907 2.25e-13 75.5
Msa0782970 AT1G66340.1 29.967 307 178 6 586 857 337 641 9.11e-25 112
Msa0782970 AT2G17820.1 27.907 301 163 5 547 793 453 753 2.13e-23 108
Msa0782970 AT2G40940.1 30.488 246 136 5 586 797 337 581 2.04e-15 81.6
Msa0782970 AT2G47430.1 34.483 174 72 7 955 1106 956 1109 2.52e-13 75.5
Msa0782970 AT3G04580.2 31.944 144 77 4 980 1122 643 766 5.35e-11 67.4
Msa0782970 AT3G04580.1 31.944 144 77 4 980 1122 643 766 5.35e-11 67.4

Find 254 sgRNAs with CRISPR-Local

Find 525 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATTTCCTTGGACAGCATTC+TGG 0.103589 5_2:+66665592 Msa0782970:CDS
ATTAATTACCCGTCCATTTC+TGG 0.122771 5_2:-66667900 None:intergenic
TCTGGGTTTGCTTCAAATTT+TGG 0.123055 5_2:+66662237 Msa0782970:five_prime_UTR
ATTGATACACAAACGAATTT+TGG 0.159316 5_2:+66667725 Msa0782970:CDS
GGGTTTGGTGAGAGAGATTC+TGG 0.181216 5_2:+66662219 Msa0782970:five_prime_UTR
GTTAATGTGTCCGAAGAATT+TGG 0.182183 5_2:+66662939 Msa0782970:CDS
TACTGTTTCTGTTGCTGTTT+TGG 0.189262 5_2:+66662505 Msa0782970:CDS
CCCTTTGGCCTCTGAGTTCC+AGG 0.193078 5_2:+66667144 Msa0782970:CDS
GTTTGACTGCAGAAAATATT+TGG 0.207225 5_2:+66664376 Msa0782970:intron
ATTGTGAATGGAAGAGTTTC+TGG 0.209014 5_2:+66662390 Msa0782970:CDS
GGATGTTGTTTGGTCCTTAT+TGG 0.219358 5_2:+66663795 Msa0782970:CDS
TTGGACTTTAGTAGTTTAAA+AGG 0.222874 5_2:-66664889 None:intergenic
AAAGTTTCAAAAGTTAAATT+TGG 0.231203 5_2:+66666829 Msa0782970:CDS
CTTTAGCTCCTTCTGCTCAT+TGG 0.237386 5_2:-66667571 None:intergenic
AATTTATCTAGTTTAATTAA+AGG 0.239445 5_2:+66663774 Msa0782970:CDS
TTTAGCTCCTTCTGCTCATT+GGG 0.261024 5_2:-66667570 None:intergenic
CACGTAAGCGGTCTAGATTT+TGG 0.265877 5_2:+66665440 Msa0782970:CDS
ACAGCATTCTGGGCATCCTT+GGG 0.276319 5_2:+66665603 Msa0782970:CDS
GACCTCATGGGAGGAGAAAT+TGG 0.278166 5_2:+66667022 Msa0782970:CDS
TCCATGTATTGGAAGGTATC+TGG 0.278596 5_2:+66665268 Msa0782970:intron
TTTGGTGCTGTTGTTGCTAT+AGG 0.279084 5_2:+66662531 Msa0782970:CDS
TTTGTTATTACCTTTCTTCT+TGG 0.283122 5_2:+66665630 Msa0782970:CDS
TATTAATCAATCCAGTATTA+TGG 0.283352 5_2:+66670141 Msa0782970:three_prime_UTR
TAGGAAACAGCTTCATGTTT+TGG 0.295445 5_2:+66662656 Msa0782970:CDS
ACCCGTCCATTTCTGGCATT+TGG 0.297045 5_2:-66667893 None:intergenic
TTGGTTCTGCATGGTTATTT+AGG 0.298048 5_2:+66664000 Msa0782970:CDS
ACCACTCGTGTGAGCAGTTT+GGG 0.298376 5_2:-66666179 None:intergenic
TTAATGTGTCCGAAGAATTT+GGG 0.305181 5_2:+66662940 Msa0782970:CDS
GACAGCATTCTGGGCATCCT+TGG 0.312293 5_2:+66665602 Msa0782970:CDS
TTGTTTGTTAAGATATGAAT+TGG 0.325104 5_2:+66662118 Msa0782970:five_prime_UTR
TGAACAAAGTCATCAAGAAT+TGG 0.326747 5_2:-66663009 None:intergenic
TGATACATATTCCATAATAC+TGG 0.328906 5_2:-66670152 None:intergenic
GGGTGGTAAGGCTGCTCTTA+AGG 0.331631 5_2:+66667827 Msa0782970:CDS
TGTTTGGTAACATTTCTTAC+TGG 0.332153 5_2:+66668087 Msa0782970:CDS
GAAGGTGTTCTGCGAAAATA+TGG 0.332772 5_2:+66667783 Msa0782970:CDS
TCTGAAAAGTCCGATGAAAA+AGG 0.335369 5_2:+66666325 Msa0782970:CDS
TTCTTATAGACAAGGATTCT+TGG 0.335599 5_2:+66667439 Msa0782970:CDS
TGGTTGGACAATTAAGAAAA+TGG 0.343061 5_2:+66664501 Msa0782970:CDS
GACTAGGCTAATCCGGTATA+TGG 0.343716 5_2:+66668016 Msa0782970:CDS
ATTTCCTTGGACAGCATTCT+GGG 0.350113 5_2:+66665593 Msa0782970:CDS
TGGACTTTAGTAGTTTAAAA+GGG 0.352298 5_2:-66664888 None:intergenic
AATTGCTTGTGGGGAAGAAT+TGG 0.353403 5_2:+66668058 Msa0782970:CDS
TTTGTAAGTGAGCCTGAAAT+TGG 0.376302 5_2:+66667046 Msa0782970:CDS
TACCACTCGTGTGAGCAGTT+TGG 0.378780 5_2:-66666180 None:intergenic
ATGTACTAATGAAGCCTCTT+TGG 0.380444 5_2:+66667613 Msa0782970:CDS
AAGATTCATGTTGTGGTGTT+TGG 0.380532 5_2:+66662274 Msa0782970:five_prime_UTR
CCTCCTTTCATCAATACAAT+TGG 0.381731 5_2:-66662875 None:intergenic
TTACCTAAAACACCATTCAT+TGG 0.382326 5_2:-66666013 None:intergenic
CAGAATGCTGTCCAAGGAAA+TGG 0.384642 5_2:-66665591 None:intergenic
TGAAAGTTCTCCATTCTGAT+AGG 0.384878 5_2:+66664458 Msa0782970:CDS
TTTATGTCAGTTGGAATCCT+TGG 0.387171 5_2:+66663981 Msa0782970:CDS
TGGGGCTAAGGTGGGTGGCC+AGG 0.387928 5_2:-66667551 None:intergenic
TCGGTACCATACATCGTAAT+AGG 0.388024 5_2:-66665395 None:intergenic
GGATCTCCAAATGCCAGAAA+TGG 0.388575 5_2:+66667887 Msa0782970:CDS
TTGCAGGAGCAGAGGTGAAC+AGG 0.393768 5_2:+66668646 Msa0782970:CDS
TTTAATTAAAGGATGTTGTT+TGG 0.394773 5_2:+66663785 Msa0782970:CDS
TCTTATAGACAAGGATTCTT+GGG 0.395654 5_2:+66667440 Msa0782970:CDS
GGAAGAGTTTCTGGTTCAAA+TGG 0.396669 5_2:+66662399 Msa0782970:CDS
TCAAAAGCAGAAGGTAGTTA+AGG 0.396948 5_2:+66663866 Msa0782970:CDS
TGAAGAAGAGCAACTCTATA+CGG 0.397116 5_2:+66668205 Msa0782970:CDS
TACAGAGAATCCCTTGGAAC+TGG 0.398252 5_2:+66667657 Msa0782970:CDS
TCGCGAACATACGGTGGAAC+TGG 0.403424 5_2:+66666968 Msa0782970:CDS
ACATACGGTGGAACTGGAAT+AGG 0.407969 5_2:+66666974 Msa0782970:CDS
AGCATATGCCTCCATTTCCT+TGG 0.407983 5_2:+66665580 Msa0782970:CDS
GGTACCGATGTTCTTGATAC+TGG 0.414059 5_2:+66665410 Msa0782970:CDS
GAAGAATTGGCAGAGATGTT+TGG 0.417574 5_2:+66668071 Msa0782970:CDS
CGAGCAAGGGCATCTGGAAA+GGG 0.420999 5_2:+66664853 Msa0782970:CDS
GGGACAGTATAATGCCAATA+AGG 0.430051 5_2:-66663809 None:intergenic
ATACTGTCCCACAAGTTGTC+TGG 0.431443 5_2:+66663822 Msa0782970:CDS
GAACAAAGTCATCAAGAATT+GGG 0.433982 5_2:-66663008 None:intergenic
TAGAGTTGCTCTTCTTCAAA+TGG 0.434245 5_2:-66668200 None:intergenic
CAGAATCTGTGGATGAGAAA+TGG 0.436460 5_2:+66667110 Msa0782970:CDS
TAAATTGATCTTGCAACATA+CGG 0.441964 5_2:-66664088 None:intergenic
TTGGTGCTGTTGTTGCTATA+GGG 0.442673 5_2:+66662532 Msa0782970:CDS
GACAGCAATGGTTTGCTGAC+AGG 0.443901 5_2:-66665342 None:intergenic
CACAAGTGATGGAACATCAT+AGG 0.445281 5_2:-66665297 None:intergenic
AGCTTGGATTATCATTCCCT+TGG 0.446435 5_2:+66663037 Msa0782970:CDS
CTGCTCATTGGGGCTAAGGT+GGG 0.446711 5_2:-66667559 None:intergenic
GTATCCATCGACATGATGTC+AGG 0.447012 5_2:+66664637 Msa0782970:CDS
CCTTCTGCTCATTGGGGCTA+AGG 0.447909 5_2:-66667563 None:intergenic
GACTTTGTTCACATGAAGCT+TGG 0.449258 5_2:+66663021 Msa0782970:CDS
GAAGAATTTGGGGTTACAAA+AGG 0.453235 5_2:+66662951 Msa0782970:CDS
TGCAGATGTCGCAAAATCTC+AGG 0.453763 5_2:+66665740 Msa0782970:CDS
TAGGAAACAGATGGAAAAGC+TGG 0.456035 5_2:+66666804 Msa0782970:CDS
TCTGATCCTATTACGATGTA+TGG 0.457715 5_2:+66665389 Msa0782970:CDS
GATGAGGGTGTGTGCGATTG+TGG 0.459371 5_2:+66663743 Msa0782970:CDS
TGGAGAATATACAGAGAGTT+CGG 0.464515 5_2:+66664396 Msa0782970:CDS
TTGAGGTGACTAGGCTAATC+CGG 0.464950 5_2:+66668009 Msa0782970:CDS
ACCAGTAGCCTTTGAATGAC+CGG 0.467332 5_2:-66663931 None:intergenic
TCTGCTCATTGGGGCTAAGG+TGG 0.472855 5_2:-66667560 None:intergenic
CTCATTGGGGCTAAGGTGGG+TGG 0.473446 5_2:-66667556 None:intergenic
AGAATGTATTCCAGAAAACT+TGG 0.474067 5_2:+66664549 Msa0782970:CDS
AGGTATGCTGCAAATGTTGA+TGG 0.474230 5_2:+66666123 Msa0782970:intron
CGACAGTTTCACATGAGATC+AGG 0.474661 5_2:+66665987 Msa0782970:CDS
TTGTTGCTATAGGGAGCGTT+TGG 0.475413 5_2:+66662541 Msa0782970:CDS
ATCAAAACACTTTGCCAAAG+AGG 0.475890 5_2:-66667627 None:intergenic
TGGTGCATATTCATCTTGAA+TGG 0.477295 5_2:-66664581 None:intergenic
CATATTTACACCTTTCATGC+AGG 0.477916 5_2:+66666931 Msa0782970:CDS
ATCCTTGTCTATAAGAATCA+TGG 0.478300 5_2:-66667433 None:intergenic
TGTTTGTTAAGATATGAATT+GGG 0.480645 5_2:+66662119 Msa0782970:five_prime_UTR
CCATGTATTGGAAGGTATCT+GGG 0.482800 5_2:+66665269 Msa0782970:intron
GCGAGCAAGGGCATCTGGAA+AGG 0.484052 5_2:+66664852 Msa0782970:CDS
GGTTTGGTGAGAGAGATTCT+GGG 0.486465 5_2:+66662220 Msa0782970:five_prime_UTR
CTTGTTCTCAGGATCAGATC+AGG 0.487332 5_2:+66662683 Msa0782970:CDS
CAAGGACAGAATGGCGTCAA+AGG 0.488603 5_2:+66667498 Msa0782970:CDS
TTACCTCGTTCTCCATATAC+CGG 0.488691 5_2:-66668028 None:intergenic
TACATGGAATCACTCATTGC+AGG 0.488992 5_2:+66668630 Msa0782970:CDS
AATCCATCTGATTGTCATCA+AGG 0.489725 5_2:-66666153 None:intergenic
CCCGGTCATTCAAAGGCTAC+TGG 0.491515 5_2:+66663930 Msa0782970:CDS
AATGTTACATATGCTTTCCA+AGG 0.494279 5_2:-66663054 None:intergenic
AATAAATCGAATAGCTAAAG+TGG 0.498068 5_2:+66665671 Msa0782970:CDS
ACGATATCACCTGCAGAGGT+TGG 0.499162 5_2:+66667216 Msa0782970:CDS
CGGATTCAACATTGTATGCC+CGG 0.499645 5_2:+66663912 Msa0782970:CDS
CCTCGACTGTTACTAGTAGT+TGG 0.500006 5_2:-66666871 None:intergenic
ACAGTCGAGGACACTGGTAT+AGG 0.500734 5_2:+66666884 Msa0782970:CDS
TGTCCAATTGTATTGATGAA+AGG 0.501841 5_2:+66662872 Msa0782970:CDS
TTTGAAACAAGAACAAGAGT+TGG 0.502560 5_2:-66662050 None:intergenic
CAGCATTCTGGGCATCCTTG+GGG 0.503392 5_2:+66665604 Msa0782970:CDS
AACAAAAGCCAGACAACTTG+TGG 0.503467 5_2:-66663830 None:intergenic
CGATATCACCTGCAGAGGTT+GGG 0.504786 5_2:+66667217 Msa0782970:CDS
ACATCCTTCCGCAGTTGACC+AGG 0.506511 5_2:+66664172 Msa0782970:CDS
TTCAACTGCAATATATTACA+TGG 0.506745 5_2:+66668614 Msa0782970:CDS
TTACTAATGCTCTCAAACCC+TGG 0.510047 5_2:-66667162 None:intergenic
TTGGAATCCTTGGTTCTGCA+TGG 0.513364 5_2:+66663991 Msa0782970:CDS
AGTCGTATTTGCTCAAGAAA+CGG 0.515422 5_2:+66664603 Msa0782970:CDS
CAAAATGCATCCTATCAGAA+TGG 0.515566 5_2:-66664468 None:intergenic
AGTTCCACATCGCGAACATA+CGG 0.515602 5_2:+66666959 Msa0782970:CDS
TACCTGTGTGGAGGGTGGTA+AGG 0.516659 5_2:+66667815 Msa0782970:CDS
ATGGCAGAAGAATAACCCTT+TGG 0.523166 5_2:+66667129 Msa0782970:CDS
GAGCAAAACGTTAACCAAAT+CGG 0.525792 5_2:-66663094 None:intergenic
CCTGGAACTCAGAGGCCAAA+GGG 0.527638 5_2:-66667144 None:intergenic
CAGACATGCCCAACCTCTGC+AGG 0.530444 5_2:-66667225 None:intergenic
GGACTTTAGTAGTTTAAAAG+GGG 0.531138 5_2:-66664887 None:intergenic
GGTGCATATTCATCTTGAAT+GGG 0.531343 5_2:-66664580 None:intergenic
CTGATCTGATCCTGAGAACA+AGG 0.533568 5_2:-66662682 None:intergenic
AAATTGATCTTGCAACATAC+GGG 0.535060 5_2:-66664087 None:intergenic
AGGATGTCTGTGATTGTGAA+TGG 0.536700 5_2:+66662378 Msa0782970:exon
GAGTGGTAAAGATCTTATAT+CGG 0.537674 5_2:+66666195 Msa0782970:CDS
GGCTCTCTCATCACACATAG+TGG 0.539504 5_2:-66664066 None:intergenic
TATTCATCTTGAATGGGCGC+TGG 0.540279 5_2:-66664574 None:intergenic
TCCAAATGCCAGAAATGGAC+GGG 0.542668 5_2:+66667892 Msa0782970:CDS
GGGGCTAAGATGGAAAGAAA+TGG 0.542871 5_2:+66670075 Msa0782970:three_prime_UTR
CCTTTGGCCTCTGAGTTCCA+GGG 0.543146 5_2:+66667145 Msa0782970:CDS
ATCAAGAAACAAGGACAGAA+TGG 0.546253 5_2:+66667489 Msa0782970:CDS
CTTCAAATGTTGTTAAGTAG+TGG 0.546319 5_2:+66662898 Msa0782970:CDS
GACAATAATGTCTTTGAGAG+TGG 0.548662 5_2:-66662093 None:intergenic
TAAATGTCTAGTTGACCTCA+TGG 0.554358 5_2:+66667009 Msa0782970:CDS
AGAAGCTTGTCCACAAGTGA+TGG 0.554573 5_2:-66665308 None:intergenic
TCAGCTGTCATAGCTAGTAT+TGG 0.556557 5_2:-66668116 None:intergenic
GGCCATGATTCTTATAGACA+AGG 0.556608 5_2:+66667431 Msa0782970:CDS
TTTCAGTATGTCGACGCAGT+TGG 0.556794 5_2:+66667410 Msa0782970:intron
CCAATTGTATTGATGAAAGG+AGG 0.556888 5_2:+66662875 Msa0782970:CDS
AAATATATATCCAAGAAGAA+AGG 0.557028 5_2:-66665640 None:intergenic
CTATGATGTTCCATCACTTG+TGG 0.557856 5_2:+66665298 Msa0782970:CDS
ATGTTACATACAAACTTCTG+AGG 0.560745 5_2:-66670111 None:intergenic
AAACAAGCATCAAAATTATG+TGG 0.560851 5_2:-66667861 None:intergenic
TTGGAAAGCATATGTAACAT+TGG 0.562808 5_2:+66663056 Msa0782970:CDS
CCAGTAGCCTTTGAATGACC+GGG 0.563893 5_2:-66663930 None:intergenic
TAAGCAACACCACTAGTAAG+TGG 0.564076 5_2:-66664430 None:intergenic
GTCATACACATTGACAGCAA+TGG 0.567089 5_2:-66665354 None:intergenic
AAAGCAAGCAGATTGAAGAC+TGG 0.571842 5_2:-66667260 None:intergenic
ACAAAAGCCAGACAACTTGT+GGG 0.571903 5_2:-66663829 None:intergenic
CGCAACTACAGAGAATCCCT+TGG 0.572041 5_2:+66667651 Msa0782970:CDS
CCCTGGAACTCAGAGGCCAA+AGG 0.573447 5_2:-66667145 None:intergenic
ACACAAGAATAGCGAGAGCA+TGG 0.573638 5_2:-66664130 None:intergenic
CAGAAGGAGCTAAAGTCAGT+TGG 0.574474 5_2:+66667579 Msa0782970:CDS
GAGATCAGGACTCCAATGAA+TGG 0.574560 5_2:+66666001 Msa0782970:CDS
AAATATGCGGCTTTGAGCAT+CGG 0.576359 5_2:-66666915 None:intergenic
TATATTCGTATCGAGCAAGT+AGG 0.576987 5_2:+66670000 Msa0782970:three_prime_UTR
TTGTATGCCCGGTCATTCAA+AGG 0.577652 5_2:+66663923 Msa0782970:CDS
AAAAGGAGAAACAGAATCTG+TGG 0.578251 5_2:+66667099 Msa0782970:CDS
ATTCATATCTTAACAAACAA+AGG 0.578543 5_2:-66662115 None:intergenic
TATCAAGCTAAGATCGAGGC+AGG 0.579435 5_2:+66666235 Msa0782970:CDS
GAACTATCAGCCTGCATGAA+AGG 0.579814 5_2:-66666941 None:intergenic
GAAAACATGAGATGCACTGC+AGG 0.579994 5_2:+66665474 Msa0782970:CDS
AGAACATGCAATACATTGAG+TGG 0.580850 5_2:+66666773 Msa0782970:CDS
CCTTAGCCCCAATGAGCAGA+AGG 0.581226 5_2:+66667563 Msa0782970:CDS
CTCCAAATGCCAGAAATGGA+CGG 0.581688 5_2:+66667891 Msa0782970:CDS
TGGTTTGCTGACAGGCAAGC+TGG 0.582491 5_2:-66665334 None:intergenic
TGTTACATACAAACTTCTGA+GGG 0.582615 5_2:-66670110 None:intergenic
TTAGCTCCTTCTGCTCATTG+GGG 0.582725 5_2:-66667569 None:intergenic
GTCATTCAAAGGCTACTGGT+TGG 0.583595 5_2:+66663934 Msa0782970:CDS
ATCACTCATTGCAGGAGCAG+AGG 0.585251 5_2:+66668638 Msa0782970:CDS
ATTCAAAGGCTACTGGTTGG+CGG 0.585519 5_2:+66663937 Msa0782970:CDS
CAGAGAGTTCGGCATTTGAG+AGG 0.586906 5_2:+66664407 Msa0782970:CDS
GTGGTGTGAAAGAAAGAGAT+AGG 0.587227 5_2:-66661943 None:intergenic
ACATTGAGTGGATTTCCTGT+AGG 0.587511 5_2:+66666785 Msa0782970:CDS
TTTCTGATACTTGCAACTCA+AGG 0.587800 5_2:+66667287 Msa0782970:CDS
AAGGAAGAATCAAAAGCAGA+AGG 0.589976 5_2:+66663857 Msa0782970:CDS
ACAGAGAATCCCTTGGAACT+GGG 0.595621 5_2:+66667658 Msa0782970:CDS
GATTTCCTGTAGGAAACAGA+TGG 0.596201 5_2:+66666795 Msa0782970:CDS
GATGCCCAGAATGCTGTCCA+AGG 0.597141 5_2:-66665597 None:intergenic
ATCCACCTGCTCCACAAAAG+CGG 0.599663 5_2:+66663892 Msa0782970:CDS
TGACCTTGATGACAATCAGA+TGG 0.600124 5_2:+66666150 Msa0782970:CDS
CAAGCATCAAAATTATGTGG+TGG 0.600540 5_2:-66667858 None:intergenic
GTTTCTTGAGCAAATACGAC+TGG 0.600912 5_2:-66664601 None:intergenic
GCAGTAGTTACCTGTGTGGA+GGG 0.602358 5_2:+66667807 Msa0782970:CDS
GAATAGCGAGAGCATGGACA+TGG 0.603489 5_2:-66664124 None:intergenic
AGCAAGGGCATCTGGAAAGG+GGG 0.603947 5_2:+66664855 Msa0782970:CDS
ATGTTACATATGCTTTCCAA+GGG 0.605409 5_2:-66663053 None:intergenic
AGACAAGGATTCTTGGGACA+AGG 0.605502 5_2:+66667446 Msa0782970:CDS
GAGCAAGGGCATCTGGAAAG+GGG 0.605827 5_2:+66664854 Msa0782970:CDS
CTTCCCTGACATCATGTCGA+TGG 0.606250 5_2:-66664641 None:intergenic
AAATGTCTAGTTGACCTCAT+GGG 0.606651 5_2:+66667010 Msa0782970:CDS
AAACTTGAATCAGGACATGT+CGG 0.606659 5_2:+66666748 Msa0782970:intron
TTTGCAATCACAGGTGATGA+GGG 0.607181 5_2:+66663728 Msa0782970:intron
AGCATTCTGGGCATCCTTGG+GGG 0.608710 5_2:+66665605 Msa0782970:CDS
GACATTGTAACGTTGTAACA+AGG 0.610027 5_2:-66662631 None:intergenic
TAATGTGTCCGAAGAATTTG+GGG 0.611462 5_2:+66662941 Msa0782970:CDS
GCCCAAACTGCTCACACGAG+TGG 0.611642 5_2:+66666178 Msa0782970:CDS
TCCACCGTATGTTCGCGATG+TGG 0.613281 5_2:-66666963 None:intergenic
GTGAACAGAAAAGTTGCAGA+AGG 0.613404 5_2:+66667765 Msa0782970:CDS
TTTGAGAGGCCACTTACTAG+TGG 0.613971 5_2:+66664421 Msa0782970:CDS
AGGAAACAGATGGAAAAGCT+GGG 0.614483 5_2:+66666805 Msa0782970:CDS
TCTTATATCGGTTATAAGCG+AGG 0.615675 5_2:+66666207 Msa0782970:CDS
CTAGTAACAGTCGAGGACAC+TGG 0.623583 5_2:+66666878 Msa0782970:CDS
TCCACATCGCGAACATACGG+TGG 0.623794 5_2:+66666962 Msa0782970:CDS
TATCCATCGACATGATGTCA+GGG 0.623915 5_2:+66664638 Msa0782970:CDS
GTTACCTGGTCAACTGCGGA+AGG 0.629231 5_2:-66664176 None:intergenic
TGAATGTTCAGCTAAAGTGG+TGG 0.630190 5_2:+66662310 Msa0782970:five_prime_UTR
ATGCGGCTTTGAGCATCGGT+AGG 0.631149 5_2:-66666911 None:intergenic
CTTGTGTCTACATTTCACCA+TGG 0.631262 5_2:+66664146 Msa0782970:CDS
TAAATAACCATGCAGAACCA+AGG 0.637583 5_2:-66663998 None:intergenic
ATTCTAGTACAACATGTAGG+AGG 0.638178 5_2:+66662481 Msa0782970:CDS
GGCAGGCAAACTAGAACTTG+AGG 0.639131 5_2:+66666252 Msa0782970:CDS
AATGCTGTCCAAGGAAATGG+AGG 0.639265 5_2:-66665588 None:intergenic
AGCCTTACCACCCTCCACAC+AGG 0.641150 5_2:-66667817 None:intergenic
AGAGCAACTCTATACGGCAG+TGG 0.641157 5_2:+66668211 Msa0782970:CDS
TGGTTGTTCAGAGTTGAGTG+AGG 0.643501 5_2:+66661881 Msa0782970:five_prime_UTR
TTCTTCGGACACATTAACTG+TGG 0.646243 5_2:-66662934 None:intergenic
TACAACGTTACAATGTCAGT+AGG 0.648876 5_2:+66662637 Msa0782970:CDS
GATATCGTGTAACCTCAGCC+CGG 0.651457 5_2:-66667201 None:intergenic
CATCGACATGATGTCAGGGA+AGG 0.652451 5_2:+66664642 Msa0782970:CDS
CTAATTCTAGTACAACATGT+AGG 0.654312 5_2:+66662478 Msa0782970:CDS
GCATGAAAGGTGTAAATATG+CGG 0.658298 5_2:-66666928 None:intergenic
TGTCTAGTTGACCTCATGGG+AGG 0.658386 5_2:+66667013 Msa0782970:CDS
AGCAGTAGTTACCTGTGTGG+AGG 0.662067 5_2:+66667806 Msa0782970:CDS
GAAAATGGAAACTGAGAACG+AGG 0.669396 5_2:+66664516 Msa0782970:CDS
ACTTCATCTAGAATTGCATG+TGG 0.670385 5_2:-66666289 None:intergenic
GTAGTTACCTGTGTGGAGGG+TGG 0.673674 5_2:+66667810 Msa0782970:CDS
AAGCAATAATCACTTGAACA+AGG 0.678491 5_2:-66662013 None:intergenic
CTGCGGAAGGATGTTTACCA+TGG 0.679151 5_2:-66664163 None:intergenic
ACTGGCTTACTACACGTAAG+CGG 0.680944 5_2:+66665428 Msa0782970:CDS
TAAGCCAGTATCAAGAACAT+CGG 0.681711 5_2:-66665414 None:intergenic
ATCCAATTTCTCCTCCCATG+AGG 0.687075 5_2:-66667024 None:intergenic
TTATACGCAATCAAGAAACA+AGG 0.692490 5_2:+66667480 Msa0782970:CDS
TTACACGATATCACCTGCAG+AGG 0.694581 5_2:+66667212 Msa0782970:CDS
TCTCAAACCCTGGAACTCAG+AGG 0.698392 5_2:-66667152 None:intergenic
TCTCTATCAAGCTAAGATCG+AGG 0.707670 5_2:+66666231 Msa0782970:CDS
TGGAGCAGTAGTTACCTGTG+TGG 0.714398 5_2:+66667803 Msa0782970:CDS
GTATGTTACCTGGTCAACTG+CGG 0.716416 5_2:-66664180 None:intergenic
CCAACTACTAGTAACAGTCG+AGG 0.735761 5_2:+66666871 Msa0782970:CDS
AATCCGGTATATGGAGAACG+AGG 0.748717 5_2:+66668025 Msa0782970:CDS
GAAAATCTCAGTGAAATGTG+TGG 0.754478 5_2:-66661962 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+GGG - chr5_2:66668699-66668718 None:intergenic 0.0%
!! ATATATATATATATATATAT+AGG - chr5_2:66668698-66668717 None:intergenic 0.0%
!!! ATTAATTCACTTTTTTATTT+TGG + chr5_2:66663704-66663723 Msa0782970:intron 10.0%
!!! AATTTATCTAGTTTAATTAA+AGG + chr5_2:66663774-66663793 Msa0782970:CDS 10.0%
!!! TTTTAATATTACACATTTTA+AGG + chr5_2:66664304-66664323 Msa0782970:intron 10.0%
!! ATTAATTTCAATTACATAAA+AGG - chr5_2:66665918-66665937 None:intergenic 10.0%
!!! TTAAATATGTTTATGAATTT+TGG + chr5_2:66669725-66669744 Msa0782970:intron 10.0%
!!! ATTTTTTTGCATTGTTATAT+AGG + chr5_2:66664810-66664829 Msa0782970:intron 15.0%
!!! TATCAATAAATTTTCAAGTT+GGG - chr5_2:66667712-66667731 None:intergenic 15.0%
!!! ATTTAATTGCTCTTTAAAAA+AGG + chr5_2:66668845-66668864 Msa0782970:intron 15.0%
!!! TTTAATTGCTCTTTAAAAAA+GGG + chr5_2:66668846-66668865 Msa0782970:intron 15.0%
!!! TTTTTAAATTGGAATTTTCA+TGG + chr5_2:66669287-66669306 Msa0782970:intron 15.0%
!! ACTTCAATCAAATTAATAAA+AGG - chr5_2:66669682-66669701 None:intergenic 15.0%
!!! TCATTAATTAATTCATTTTC+TGG + chr5_2:66670052-66670071 Msa0782970:three_prime_UTR 15.0%
!!! CATTAATTAATTCATTTTCT+GGG + chr5_2:66670053-66670072 Msa0782970:three_prime_UTR 15.0%
!!! ATTAATTAATTCATTTTCTG+GGG + chr5_2:66670054-66670073 Msa0782970:three_prime_UTR 15.0%
!!! TTTTGTAGTTTTTCTATAAC+AGG - chr5_2:66661916-66661935 None:intergenic 20.0%
!! ATTCATATCTTAACAAACAA+AGG - chr5_2:66662118-66662137 None:intergenic 20.0%
!!! TTGTTTGTTAAGATATGAAT+TGG + chr5_2:66662118-66662137 Msa0782970:five_prime_UTR 20.0%
!!! TGTTTGTTAAGATATGAATT+GGG + chr5_2:66662119-66662138 Msa0782970:five_prime_UTR 20.0%
!!! AAAAGTTGGTAATTTTTTCA+AGG + chr5_2:66662358-66662377 Msa0782970:five_prime_UTR 20.0%
!!! ATTTAAACTACAGAACTTTT+AGG - chr5_2:66663157-66663176 None:intergenic 20.0%
!! TAATCAAGTTATTAGACTAT+AGG - chr5_2:66663603-66663622 None:intergenic 20.0%
!! TTTAATTAAAGGATGTTGTT+TGG + chr5_2:66663785-66663804 Msa0782970:CDS 20.0%
!!! ATGTCATTATTTTCTCTTAT+TGG + chr5_2:66664206-66664225 Msa0782970:intron 20.0%
!!! TGTCATTATTTTCTCTTATT+GGG + chr5_2:66664207-66664226 Msa0782970:intron 20.0%
!!! TTCATATTTAGAGTTATTCA+TGG + chr5_2:66664258-66664277 Msa0782970:intron 20.0%
!! AATTGAAGTGATAAAGTATA+AGG + chr5_2:66664332-66664351 Msa0782970:intron 20.0%
!! TAATCTCATTAAGTTATCAT+TGG - chr5_2:66665015-66665034 None:intergenic 20.0%
!! AAATATATATCCAAGAAGAA+AGG - chr5_2:66665643-66665662 None:intergenic 20.0%
!!! AAGTAAAGTATCTAAAGATA+GGG - chr5_2:66666364-66666383 None:intergenic 20.0%
!!! AAAGTAAAGTATCTAAAGAT+AGG - chr5_2:66666365-66666384 None:intergenic 20.0%
!!! TTTACTGGAAATTTTAGAAA+AGG + chr5_2:66667082-66667101 Msa0782970:CDS 20.0%
!! TAATAGATAGAAGAAAAATC+CGG + chr5_2:66667182-66667201 Msa0782970:CDS 20.0%
!! TATTATAATAACCTAATGTC+CGG - chr5_2:66667361-66667380 None:intergenic 20.0%
!!! GTATCAATAAATTTTCAAGT+TGG - chr5_2:66667713-66667732 None:intergenic 20.0%
!! TAAATGAAAAAATTGCTTGT+GGG + chr5_2:66668048-66668067 Msa0782970:CDS 20.0%
!!! ATGTTTTTAATTTCATGAGT+TGG + chr5_2:66668947-66668966 Msa0782970:intron 20.0%
!! TGAAATTAAAACCATGAATA+AGG - chr5_2:66669018-66669037 None:intergenic 20.0%
!! ATGGTAATATGACAAAATTA+GGG + chr5_2:66669306-66669325 Msa0782970:intron 20.0%
!!! TTTTTAGCTAGTAAATATGA+AGG + chr5_2:66669455-66669474 Msa0782970:intron 20.0%
!!! AAGTAATTGTGTGAAAATTT+TGG + chr5_2:66669698-66669717 Msa0782970:intron 20.0%
!!! TTAATTAATTCATTTTCTGG+GGG + chr5_2:66670055-66670074 Msa0782970:three_prime_UTR 20.0%
!! TATTAATCAATCCAGTATTA+TGG + chr5_2:66670141-66670160 Msa0782970:three_prime_UTR 20.0%
!!! GTACTTTTGTTGTCTTTTAT+GGG - chr5_2:66661987-66662006 None:intergenic 25.0%
!!! AGTACTTTTGTTGTCTTTTA+TGG - chr5_2:66661988-66662007 None:intergenic 25.0%
! CAAATCAAAAACTAACTTTC+AGG + chr5_2:66662069-66662088 Msa0782970:five_prime_UTR 25.0%
!! TCATCAAAATTTTACGCTTT+TGG + chr5_2:66662144-66662163 Msa0782970:five_prime_UTR 25.0%
!! TTTTCTTCACTGAAAATTCA+AGG - chr5_2:66662342-66662361 None:intergenic 25.0%
!! AATTTTCAGTGAAGAAAAGT+TGG + chr5_2:66662344-66662363 Msa0782970:five_prime_UTR 25.0%
!!! GTACTGTTTTTCAATTGTAT+TGG + chr5_2:66662731-66662750 Msa0782970:intron 25.0%
!!! TTTAAATTGTTGATTCTGCT+TGG + chr5_2:66663170-66663189 Msa0782970:intron 25.0%
! CAACATTCTTAAAAGAAATG+AGG - chr5_2:66663253-66663272 None:intergenic 25.0%
!!! ATTCTGGTTTACAAATTCAA+AGG - chr5_2:66663477-66663496 None:intergenic 25.0%
! TGAAAAGAATGTTATGATTC+TGG - chr5_2:66663493-66663512 None:intergenic 25.0%
! AACTTGATTATGTAAAGTAG+TGG + chr5_2:66663613-66663632 Msa0782970:intron 25.0%
!!! CTAGTTATTTTTATGTCAGT+TGG + chr5_2:66663972-66663991 Msa0782970:CDS 25.0%
! TAAATTGATCTTGCAACATA+CGG - chr5_2:66664091-66664110 None:intergenic 25.0%
!! GTCATTATTTTCTCTTATTG+GGG + chr5_2:66664208-66664227 Msa0782970:intron 25.0%
!! TTTTTGCATTGTTATATAGG+AGG + chr5_2:66664813-66664832 Msa0782970:intron 25.0%
! TGGACTTTAGTAGTTTAAAA+GGG - chr5_2:66664891-66664910 None:intergenic 25.0%
! TTGGACTTTAGTAGTTTAAA+AGG - chr5_2:66664892-66664911 None:intergenic 25.0%
! ATGTAACTAATTAAGTGATG+TGG - chr5_2:66665094-66665113 None:intergenic 25.0%
!!! TATATTTCCATTTTTTTGCC+AGG + chr5_2:66665553-66665572 Msa0782970:intron 25.0%
!!! TTTGTTATTACCTTTCTTCT+TGG + chr5_2:66665630-66665649 Msa0782970:CDS 25.0%
! AATAAATCGAATAGCTAAAG+TGG + chr5_2:66665671-66665690 Msa0782970:CDS 25.0%
!! ATCTCAGGTTAGATATATTT+TGG + chr5_2:66665755-66665774 Msa0782970:intron 25.0%
!! TCTCAGGTTAGATATATTTT+GGG + chr5_2:66665756-66665775 Msa0782970:intron 25.0%
! TTATAATAGATAATCCCATC+TGG + chr5_2:66666056-66666075 Msa0782970:intron 25.0%
!! CTGTTTTCAAATAATTTTCC+AGG + chr5_2:66666103-66666122 Msa0782970:intron 25.0%
!! TTATGTTCTCTATACCTTTT+TGG + chr5_2:66666430-66666449 Msa0782970:intron 25.0%
!! CAAGATTGGTAATTATTTGT+CGG - chr5_2:66666525-66666544 None:intergenic 25.0%
! CAAATAATTACCAATCTTGT+TGG + chr5_2:66666526-66666545 Msa0782970:intron 25.0%
! TTTCAGTTCATTCACAATAA+AGG + chr5_2:66666644-66666663 Msa0782970:intron 25.0%
! AATAGATAGAAGAAAAATCC+GGG + chr5_2:66667183-66667202 Msa0782970:CDS 25.0%
!!! AGGTAATGTGTTAGTTTTTT+TGG + chr5_2:66667307-66667326 Msa0782970:intron 25.0%
!! ATTGATACACAAACGAATTT+TGG + chr5_2:66667725-66667744 Msa0782970:CDS 25.0%
! AAACAAGCATCAAAATTATG+TGG - chr5_2:66667864-66667883 None:intergenic 25.0%
!!! TAATTTTGATGCTTGTTTCA+TGG + chr5_2:66667866-66667885 Msa0782970:CDS 25.0%
! GTAAATGAAAAAATTGCTTG+TGG + chr5_2:66668047-66668066 Msa0782970:CDS 25.0%
! AAATGAAAAAATTGCTTGTG+GGG + chr5_2:66668049-66668068 Msa0782970:CDS 25.0%
! AATGAAGAATGCAAAAAATG+TGG + chr5_2:66668155-66668174 Msa0782970:CDS 25.0%
! ATGAAGAATGCAAAAAATGT+GGG + chr5_2:66668156-66668175 Msa0782970:CDS 25.0%
! ACTTGTAATATGAAAATCCA+AGG - chr5_2:66668401-66668420 None:intergenic 25.0%
! TTCAACTGCAATATATTACA+TGG + chr5_2:66668614-66668633 Msa0782970:CDS 25.0%
! GAGGAATTAATTTAAACCAT+TGG + chr5_2:66668803-66668822 Msa0782970:intron 25.0%
! TTAAAAACATGAAGAAGAAG+CGG - chr5_2:66668937-66668956 None:intergenic 25.0%
!! TTTTCGATCTATCTGTTTAA+AGG - chr5_2:66669083-66669102 None:intergenic 25.0%
! CATGGTAATATGACAAAATT+AGG + chr5_2:66669305-66669324 Msa0782970:intron 25.0%
! ACCTTAAGAAAAATACAGAA+AGG + chr5_2:66669369-66669388 Msa0782970:intron 25.0%
! CCTTAAGAAAAATACAGAAA+GGG + chr5_2:66669370-66669389 Msa0782970:intron 25.0%
! ACTTGCAACTTTGAATTTAA+AGG + chr5_2:66669426-66669445 Msa0782970:intron 25.0%
! CTTGCAACTTTGAATTTAAA+GGG + chr5_2:66669427-66669446 Msa0782970:intron 25.0%
! TAATTGGACTTGAAGTTTAA+TGG + chr5_2:66669581-66669600 Msa0782970:intron 25.0%
! AATTGGACTTGAAGTTTAAT+GGG + chr5_2:66669582-66669601 Msa0782970:intron 25.0%
! TATAGAATGTTGGAAAAACT+TGG - chr5_2:66669619-66669638 None:intergenic 25.0%
!! AGATTTTGGATATAGAATGT+TGG - chr5_2:66669629-66669648 None:intergenic 25.0%
!!! AATTGTGTGAAAATTTTGGT+AGG + chr5_2:66669702-66669721 Msa0782970:intron 25.0%
!! TAATTAATTCATTTTCTGGG+GGG + chr5_2:66670056-66670075 Msa0782970:three_prime_UTR 25.0%
! TGATACATATTCCATAATAC+TGG - chr5_2:66670155-66670174 None:intergenic 25.0%
AAGCAATAATCACTTGAACA+AGG - chr5_2:66662016-66662035 None:intergenic 30.0%
! TTTGAAACAAGAACAAGAGT+TGG - chr5_2:66662053-66662072 None:intergenic 30.0%
!! ACTTTATGAGTTTTGTGAAG+TGG + chr5_2:66662198-66662217 Msa0782970:five_prime_UTR 30.0%
!! CTTTATGAGTTTTGTGAAGT+GGG + chr5_2:66662199-66662218 Msa0782970:five_prime_UTR 30.0%
!! TCTTTTGAAGATTCATGTTG+TGG + chr5_2:66662267-66662286 Msa0782970:five_prime_UTR 30.0%
! TTTTGAATGTTCAGCTAAAG+TGG + chr5_2:66662307-66662326 Msa0782970:five_prime_UTR 30.0%
! CTTCACCAAAAATCAAGTTT+TGG + chr5_2:66662430-66662449 Msa0782970:CDS 30.0%
! CCTTTCCAAAACTTGATTTT+TGG - chr5_2:66662438-66662457 None:intergenic 30.0%
!!! CCAAAAATCAAGTTTTGGAA+AGG + chr5_2:66662435-66662454 Msa0782970:CDS 30.0%
CTAATTCTAGTACAACATGT+AGG + chr5_2:66662478-66662497 Msa0782970:CDS 30.0%
!!! CATAAGATGCACTTTGTTTT+TGG + chr5_2:66662709-66662728 Msa0782970:intron 30.0%
! TGTCCAATTGTATTGATGAA+AGG + chr5_2:66662872-66662891 Msa0782970:CDS 30.0%
CTTCAAATGTTGTTAAGTAG+TGG + chr5_2:66662898-66662917 Msa0782970:CDS 30.0%
TTAATGTGTCCGAAGAATTT+GGG + chr5_2:66662940-66662959 Msa0782970:CDS 30.0%
! TTTTGTAACCCCAAATTCTT+CGG - chr5_2:66662952-66662971 None:intergenic 30.0%
GAACAAAGTCATCAAGAATT+GGG - chr5_2:66663011-66663030 None:intergenic 30.0%
TGAACAAAGTCATCAAGAAT+TGG - chr5_2:66663012-66663031 None:intergenic 30.0%
ATGTTACATATGCTTTCCAA+GGG - chr5_2:66663056-66663075 None:intergenic 30.0%
AATGTTACATATGCTTTCCA+AGG - chr5_2:66663057-66663076 None:intergenic 30.0%
! TTGGAAAGCATATGTAACAT+TGG + chr5_2:66663056-66663075 Msa0782970:CDS 30.0%
GGTCAATCACTATGTAAATT+AGG - chr5_2:66663213-66663232 None:intergenic 30.0%
AATCTTCAAACTTCTAGCAA+GGG - chr5_2:66663454-66663473 None:intergenic 30.0%
!!! TATTTTGGTTTTGCAATCAC+AGG + chr5_2:66663719-66663738 Msa0782970:intron 30.0%
AAATTGATCTTGCAACATAC+GGG - chr5_2:66664090-66664109 None:intergenic 30.0%
GTTTGACTGCAGAAAATATT+TGG + chr5_2:66664376-66664395 Msa0782970:intron 30.0%
TGGTTGGACAATTAAGAAAA+TGG + chr5_2:66664501-66664520 Msa0782970:CDS 30.0%
AGAATGTATTCCAGAAAACT+TGG + chr5_2:66664549-66664568 Msa0782970:CDS 30.0%
AGATTCAGATGAAATAAGCT+TGG + chr5_2:66664727-66664746 Msa0782970:intron 30.0%
CATTAAATTGCTCACATATC+AGG + chr5_2:66664772-66664791 Msa0782970:intron 30.0%
GGACTTTAGTAGTTTAAAAG+GGG - chr5_2:66664890-66664909 None:intergenic 30.0%
GACATTGTAAAAATACTCCA+CGG - chr5_2:66665125-66665144 None:intergenic 30.0%
!! GTGGAGTATTTTTACAATGT+CGG + chr5_2:66665124-66665143 Msa0782970:intron 30.0%
! TTTTTACAATGTCGGTGTAT+TGG + chr5_2:66665132-66665151 Msa0782970:intron 30.0%
TTACAAATGCATGTGATACA+CGG - chr5_2:66665179-66665198 None:intergenic 30.0%
! CTCAGGTTAGATATATTTTG+GGG + chr5_2:66665757-66665776 Msa0782970:intron 30.0%
AAAGAGAAACTAATCCTTTG+AGG - chr5_2:66665954-66665973 None:intergenic 30.0%
TTACCTAAAACACCATTCAT+TGG - chr5_2:66666016-66666035 None:intergenic 30.0%
GAGTGGTAAAGATCTTATAT+CGG + chr5_2:66666195-66666214 Msa0782970:CDS 30.0%
AGAATGCTTAAACTTGAATC+AGG + chr5_2:66666739-66666758 Msa0782970:intron 30.0%
!! GAAAAAGTACTTCCAATTTC+AGG - chr5_2:66667061-66667080 None:intergenic 30.0%
!!! GGAAGTACTTTTTCATTTAC+TGG + chr5_2:66667067-66667086 Msa0782970:CDS 30.0%
AAAATTCAGATCAGTTGTAC+CGG + chr5_2:66667339-66667358 Msa0782970:intron 30.0%
ATCCTTGTCTATAAGAATCA+TGG - chr5_2:66667436-66667455 None:intergenic 30.0%
TTCTTATAGACAAGGATTCT+TGG + chr5_2:66667439-66667458 Msa0782970:CDS 30.0%
TCTTATAGACAAGGATTCTT+GGG + chr5_2:66667440-66667459 Msa0782970:CDS 30.0%
TTATACGCAATCAAGAAACA+AGG + chr5_2:66667480-66667499 Msa0782970:CDS 30.0%
! TGTTTGGTAACATTTCTTAC+TGG + chr5_2:66668087-66668106 Msa0782970:CDS 30.0%
! TTCAGTTTTTGTTCACAGTA+AGG + chr5_2:66668242-66668261 Msa0782970:intron 30.0%
! GAAATCAACTTTCTGAAAAG+AGG - chr5_2:66668597-66668616 None:intergenic 30.0%
!! AGAGCACTTTTTAAATGAGA+GGG + chr5_2:66668777-66668796 Msa0782970:intron 30.0%
ACATTGACAATCCTTATTCA+TGG + chr5_2:66669004-66669023 Msa0782970:intron 30.0%
GATCGAAAATAGCTAAGAAA+AGG + chr5_2:66669094-66669113 Msa0782970:intron 30.0%
TTATCAGATCTACTCATCAA+CGG - chr5_2:66669139-66669158 None:intergenic 30.0%
TGACAAAATTAGGGATAACA+AGG + chr5_2:66669315-66669334 Msa0782970:intron 30.0%
AACAAGGTTGAGATATGAAT+TGG + chr5_2:66669331-66669350 Msa0782970:intron 30.0%
! CCCTTTCTGTATTTTTCTTA+AGG - chr5_2:66669373-66669392 None:intergenic 30.0%
GAACAACTGGAATGAATTTA+GGG + chr5_2:66669392-66669411 Msa0782970:intron 30.0%
TAGCTAGTAAATATGAAGGA+AGG + chr5_2:66669459-66669478 Msa0782970:intron 30.0%
! GATTATGAATCGATTCCATT+AGG - chr5_2:66669515-66669534 None:intergenic 30.0%
GAAACAGTGTGAAGATTAAT+TGG + chr5_2:66669565-66669584 Msa0782970:intron 30.0%
CACCATAAAGATTGATCTAA+GGG + chr5_2:66669863-66669882 Msa0782970:intron 30.0%
AACCCTTAGATCAATCTTTA+TGG - chr5_2:66669868-66669887 None:intergenic 30.0%
TGTTACATACAAACTTCTGA+GGG - chr5_2:66670113-66670132 None:intergenic 30.0%
ATGTTACATACAAACTTCTG+AGG - chr5_2:66670114-66670133 None:intergenic 30.0%
!! CCAAAAAAAAGCATCAAGAG+TGG - chr5_2:66661864-66661883 None:intergenic 35.0%
!!! CCACTCTTGATGCTTTTTTT+TGG + chr5_2:66661861-66661880 Msa0782970:five_prime_UTR 35.0%
GAAAATCTCAGTGAAATGTG+TGG - chr5_2:66661965-66661984 None:intergenic 35.0%
! GACAATAATGTCTTTGAGAG+TGG - chr5_2:66662096-66662115 None:intergenic 35.0%
!! TCTGGGTTTGCTTCAAATTT+TGG + chr5_2:66662237-66662256 Msa0782970:five_prime_UTR 35.0%
AAGATTCATGTTGTGGTGTT+TGG + chr5_2:66662274-66662293 Msa0782970:five_prime_UTR 35.0%
ATTGTGAATGGAAGAGTTTC+TGG + chr5_2:66662390-66662409 Msa0782970:CDS 35.0%
ATTCTAGTACAACATGTAGG+AGG + chr5_2:66662481-66662500 Msa0782970:CDS 35.0%
!!! TACTGTTTCTGTTGCTGTTT+TGG + chr5_2:66662505-66662524 Msa0782970:CDS 35.0%
!!! ACTGTTTCTGTTGCTGTTTT+GGG + chr5_2:66662506-66662525 Msa0782970:CDS 35.0%
GACATTGTAACGTTGTAACA+AGG - chr5_2:66662634-66662653 None:intergenic 35.0%
TACAACGTTACAATGTCAGT+AGG + chr5_2:66662637-66662656 Msa0782970:CDS 35.0%
! TAGGAAACAGCTTCATGTTT+TGG + chr5_2:66662656-66662675 Msa0782970:CDS 35.0%
CCTCCTTTCATCAATACAAT+TGG - chr5_2:66662878-66662897 None:intergenic 35.0%
! CCAATTGTATTGATGAAAGG+AGG + chr5_2:66662875-66662894 Msa0782970:CDS 35.0%
GTTAATGTGTCCGAAGAATT+TGG + chr5_2:66662939-66662958 Msa0782970:CDS 35.0%
TAATGTGTCCGAAGAATTTG+GGG + chr5_2:66662941-66662960 Msa0782970:CDS 35.0%
! GAAGAATTTGGGGTTACAAA+AGG + chr5_2:66662951-66662970 Msa0782970:CDS 35.0%
GAGCAAAACGTTAACCAAAT+CGG - chr5_2:66663097-66663116 None:intergenic 35.0%
GTAAAAACTCTACCTTTCCA+CGG - chr5_2:66663119-66663138 None:intergenic 35.0%
GAGGCATATAAGATGTCTAA+AGG - chr5_2:66663234-66663253 None:intergenic 35.0%
! TGGTTGGTATACTGTAAAAC+AGG - chr5_2:66663349-66663368 None:intergenic 35.0%
! TTCTAGCAAGGGCATAAAAA+TGG - chr5_2:66663443-66663462 None:intergenic 35.0%
GAATCTTCAAACTTCTAGCA+AGG - chr5_2:66663455-66663474 None:intergenic 35.0%
!!! TGTCTGGCTTTTGTTTACTA+AGG + chr5_2:66663838-66663857 Msa0782970:CDS 35.0%
AAGGAAGAATCAAAAGCAGA+AGG + chr5_2:66663857-66663876 Msa0782970:CDS 35.0%
TCAAAAGCAGAAGGTAGTTA+AGG + chr5_2:66663866-66663885 Msa0782970:CDS 35.0%
TTTATGTCAGTTGGAATCCT+TGG + chr5_2:66663981-66664000 Msa0782970:CDS 35.0%
TAAATAACCATGCAGAACCA+AGG - chr5_2:66664001-66664020 None:intergenic 35.0%
!! TTGGTTCTGCATGGTTATTT+AGG + chr5_2:66664000-66664019 Msa0782970:CDS 35.0%
ATGACATTGAGTATGTTACC+TGG - chr5_2:66664193-66664212 None:intergenic 35.0%
TGGAGAATATACAGAGAGTT+CGG + chr5_2:66664396-66664415 Msa0782970:CDS 35.0%
TGAAAGTTCTCCATTCTGAT+AGG + chr5_2:66664458-66664477 Msa0782970:CDS 35.0%
CAAAATGCATCCTATCAGAA+TGG - chr5_2:66664471-66664490 None:intergenic 35.0%
GGTGCATATTCATCTTGAAT+GGG - chr5_2:66664583-66664602 None:intergenic 35.0%
TGGTGCATATTCATCTTGAA+TGG - chr5_2:66664584-66664603 None:intergenic 35.0%
AGTCGTATTTGCTCAAGAAA+CGG + chr5_2:66664603-66664622 Msa0782970:CDS 35.0%
TGACGACTGTCAATAACATA+AGG - chr5_2:66664694-66664713 None:intergenic 35.0%
! TGAGAATATTTTGCGAGCAA+GGG + chr5_2:66664840-66664859 Msa0782970:CDS 35.0%
CTACTAAAGTCCAATTACCT+CGG + chr5_2:66664898-66664917 Msa0782970:intron 35.0%
TTGTAAAAATACTCCACGGT+AGG - chr5_2:66665121-66665140 None:intergenic 35.0%
ATTGGATGTAATGTGTGTGT+TGG + chr5_2:66665150-66665169 Msa0782970:intron 35.0%
TATACACTGTCACTGTAAAG+AGG - chr5_2:66665204-66665223 None:intergenic 35.0%
! GTGTGTTGTTATCCATGTAT+TGG + chr5_2:66665257-66665276 Msa0782970:intron 35.0%
GTTGTTATCCATGTATTGGA+AGG + chr5_2:66665261-66665280 Msa0782970:intron 35.0%
TCTGATCCTATTACGATGTA+TGG + chr5_2:66665389-66665408 Msa0782970:CDS 35.0%
TAAGCCAGTATCAAGAACAT+CGG - chr5_2:66665417-66665436 None:intergenic 35.0%
TGCAACAAAATTGTTTCCGA+TGG + chr5_2:66665797-66665816 Msa0782970:intron 35.0%
AATCCTAACATTCTTGCCAT+CGG - chr5_2:66665816-66665835 None:intergenic 35.0%
TAATTCTCTCTTGACCTCAA+AGG + chr5_2:66665937-66665956 Msa0782970:intron 35.0%
! ACTCCAATGAATGGTGTTTT+AGG + chr5_2:66666010-66666029 Msa0782970:CDS 35.0%
AATCCATCTGATTGTCATCA+AGG - chr5_2:66666156-66666175 None:intergenic 35.0%
! TCTTATATCGGTTATAAGCG+AGG + chr5_2:66666207-66666226 Msa0782970:CDS 35.0%
! ACTTCATCTAGAATTGCATG+TGG - chr5_2:66666292-66666311 None:intergenic 35.0%
TCTGAAAAGTCCGATGAAAA+AGG + chr5_2:66666325-66666344 Msa0782970:CDS 35.0%
!! CACCTCAATTCCTTTTTCAT+CGG - chr5_2:66666338-66666357 None:intergenic 35.0%
TTTGTACCCTCCAATTATCT+CGG + chr5_2:66666387-66666406 Msa0782970:intron 35.0%
!! ATTATTTGTCGGAAGCGTTT+AGG - chr5_2:66666514-66666533 None:intergenic 35.0%
AAGCGAATTTCCAACAAGAT+TGG - chr5_2:66666539-66666558 None:intergenic 35.0%
TCTTGTTGGAAATTCGCTTA+AGG + chr5_2:66666540-66666559 Msa0782970:intron 35.0%
!! TGTTTTTGTCTCGATTCATC+TGG + chr5_2:66666670-66666689 Msa0782970:intron 35.0%
AAACTTGAATCAGGACATGT+CGG + chr5_2:66666748-66666767 Msa0782970:intron 35.0%
AGAACATGCAATACATTGAG+TGG + chr5_2:66666773-66666792 Msa0782970:CDS 35.0%
! GCATGAAAGGTGTAAATATG+CGG - chr5_2:66666931-66666950 None:intergenic 35.0%
CATATTTACACCTTTCATGC+AGG + chr5_2:66666931-66666950 Msa0782970:CDS 35.0%
TAAATGTCTAGTTGACCTCA+TGG + chr5_2:66667009-66667028 Msa0782970:CDS 35.0%
AAATGTCTAGTTGACCTCAT+GGG + chr5_2:66667010-66667029 Msa0782970:CDS 35.0%
TTTGTAAGTGAGCCTGAAAT+TGG + chr5_2:66667046-66667065 Msa0782970:CDS 35.0%
AAAAGGAGAAACAGAATCTG+TGG + chr5_2:66667099-66667118 Msa0782970:CDS 35.0%
TTTCTGATACTTGCAACTCA+AGG + chr5_2:66667287-66667306 Msa0782970:CDS 35.0%
ATCAAGAAACAAGGACAGAA+TGG + chr5_2:66667489-66667508 Msa0782970:CDS 35.0%
! CTTTCCAAAGATTTTTCTCC+TGG + chr5_2:66667533-66667552 Msa0782970:CDS 35.0%
ATGTACTAATGAAGCCTCTT+TGG + chr5_2:66667613-66667632 Msa0782970:CDS 35.0%
ATCAAAACACTTTGCCAAAG+AGG - chr5_2:66667630-66667649 None:intergenic 35.0%
! GATACACAAACGAATTTTGG+TGG + chr5_2:66667728-66667747 Msa0782970:CDS 35.0%
CAAGCATCAAAATTATGTGG+TGG - chr5_2:66667861-66667880 None:intergenic 35.0%
ATTAATTACCCGTCCATTTC+TGG - chr5_2:66667903-66667922 None:intergenic 35.0%
! TCTTACATGTTGCAGTTTTG+AGG + chr5_2:66667992-66668011 Msa0782970:intron 35.0%
AGAATGCAAAAAATGTGGGA+TGG + chr5_2:66668160-66668179 Msa0782970:CDS 35.0%
TAGAGTTGCTCTTCTTCAAA+TGG - chr5_2:66668203-66668222 None:intergenic 35.0%
TGAAGAAGAGCAACTCTATA+CGG + chr5_2:66668205-66668224 Msa0782970:CDS 35.0%
GAAAGCAGAATTCTGCATAA+TGG + chr5_2:66668328-66668347 Msa0782970:intron 35.0%
!!! GAGAGCACTTTTTAAATGAG+AGG + chr5_2:66668776-66668795 Msa0782970:intron 35.0%
! TTTTTAAATGAGAGGGTGAG+AGG + chr5_2:66668784-66668803 Msa0782970:intron 35.0%
!! AAGCGTTGATTTAGATCCAA+TGG - chr5_2:66668822-66668841 None:intergenic 35.0%
ACAGAGTGGAAAAAGAGAAA+GGG - chr5_2:66668893-66668912 None:intergenic 35.0%
AACAGAGTGGAAAAAGAGAA+AGG - chr5_2:66668894-66668913 None:intergenic 35.0%
TATCAGATCTACTCATCAAC+GGG - chr5_2:66669138-66669157 None:intergenic 35.0%
AAATACAGAAAGGGAACAAC+TGG + chr5_2:66669379-66669398 Msa0782970:intron 35.0%
GGAACAACTGGAATGAATTT+AGG + chr5_2:66669391-66669410 Msa0782970:intron 35.0%
! CACAATTGCATCTCAGATTT+TGG - chr5_2:66669643-66669662 None:intergenic 35.0%
! CAAAATCTGAGATGCAATTG+TGG + chr5_2:66669641-66669660 Msa0782970:intron 35.0%
TCAATTGAAAGAACCAGAGA+TGG + chr5_2:66669770-66669789 Msa0782970:intron 35.0%
CCTTAGATCAATCTTTATGG+TGG - chr5_2:66669865-66669884 None:intergenic 35.0%
CCACCATAAAGATTGATCTA+AGG + chr5_2:66669862-66669881 Msa0782970:intron 35.0%
! TTTTAAATGAGAGGGTGAGA+GGG - chr5_2:66668785-66668804 None:intergenic 35.0%
! TTTTTAAATGAGAGGGTGAG+AGG - chr5_2:66668784-66668803 None:intergenic 35.0%
!! AGAGCGCTTTTTAAATGAGA+GGG - chr5_2:66669908-66669927 None:intergenic 35.0%
TATATTCGTATCGAGCAAGT+AGG + chr5_2:66670000-66670019 Msa0782970:three_prime_UTR 35.0%
GTGGTGTGAAAGAAAGAGAT+AGG - chr5_2:66661946-66661965 None:intergenic 40.0%
!! TGAGTTTTGTGAAGTGGGTT+TGG + chr5_2:66662204-66662223 Msa0782970:five_prime_UTR 40.0%
TGAATGTTCAGCTAAAGTGG+TGG + chr5_2:66662310-66662329 Msa0782970:five_prime_UTR 40.0%
AGGATGTCTGTGATTGTGAA+TGG + chr5_2:66662378-66662397 Msa0782970:exon 40.0%
!! GGAAGAGTTTCTGGTTCAAA+TGG + chr5_2:66662399-66662418 Msa0782970:CDS 40.0%
!!! CTGTTGCTGTTTTGGGTTTT+TGG + chr5_2:66662513-66662532 Msa0782970:CDS 40.0%
!! TTTGGTGCTGTTGTTGCTAT+AGG + chr5_2:66662531-66662550 Msa0782970:CDS 40.0%
!! TTGGTGCTGTTGTTGCTATA+GGG + chr5_2:66662532-66662551 Msa0782970:CDS 40.0%
TTCTTCGGACACATTAACTG+TGG - chr5_2:66662937-66662956 None:intergenic 40.0%
GACTTTGTTCACATGAAGCT+TGG + chr5_2:66663021-66663040 Msa0782970:CDS 40.0%
AGCTTGGATTATCATTCCCT+TGG + chr5_2:66663037-66663056 Msa0782970:CDS 40.0%
! ACTTTGAGTTTGTCGAAGCT+CGG + chr5_2:66663370-66663389 Msa0782970:intron 40.0%
ACCAGTAGTAATGCATCGTA+TGG + chr5_2:66663404-66663423 Msa0782970:intron 40.0%
TCCATACGATGCATTACTAC+TGG - chr5_2:66663408-66663427 None:intergenic 40.0%
! TTTTGCAATCACAGGTGATG+AGG + chr5_2:66663727-66663746 Msa0782970:intron 40.0%
TTTGCAATCACAGGTGATGA+GGG + chr5_2:66663728-66663747 Msa0782970:intron 40.0%
! GGATGTTGTTTGGTCCTTAT+TGG + chr5_2:66663795-66663814 Msa0782970:CDS 40.0%
GGGACAGTATAATGCCAATA+AGG - chr5_2:66663812-66663831 None:intergenic 40.0%
ACAAAAGCCAGACAACTTGT+GGG - chr5_2:66663832-66663851 None:intergenic 40.0%
AACAAAAGCCAGACAACTTG+TGG - chr5_2:66663833-66663852 None:intergenic 40.0%
!! CAATGTTGAATCCGCTTTTG+TGG - chr5_2:66663906-66663925 None:intergenic 40.0%
CTTGTGTCTACATTTCACCA+TGG + chr5_2:66664146-66664165 Msa0782970:CDS 40.0%
TAAGCAACACCACTAGTAAG+TGG - chr5_2:66664433-66664452 None:intergenic 40.0%
!! ATGCATTTTGAGAAGCAGCA+TGG + chr5_2:66664481-66664500 Msa0782970:CDS 40.0%
!! ATTTTGAGAAGCAGCATGGT+TGG + chr5_2:66664485-66664504 Msa0782970:CDS 40.0%
GAAAATGGAAACTGAGAACG+AGG + chr5_2:66664516-66664535 Msa0782970:CDS 40.0%
GTTTCTTGAGCAAATACGAC+TGG - chr5_2:66664604-66664623 None:intergenic 40.0%
TATCCATCGACATGATGTCA+GGG + chr5_2:66664638-66664657 Msa0782970:CDS 40.0%
! GTGAGAATATTTTGCGAGCA+AGG + chr5_2:66664839-66664858 Msa0782970:CDS 40.0%
AAGTACAACACCGAGGTAAT+TGG - chr5_2:66664911-66664930 None:intergenic 40.0%
CAAATGTAAGTACAACACCG+AGG - chr5_2:66664918-66664937 None:intergenic 40.0%
TAGTTACATTCATCCTACCG+TGG + chr5_2:66665105-66665124 Msa0782970:intron 40.0%
!! TCCATGTATTGGAAGGTATC+TGG + chr5_2:66665268-66665287 Msa0782970:intron 40.0%
!! CCATGTATTGGAAGGTATCT+GGG + chr5_2:66665269-66665288 Msa0782970:intron 40.0%
! CACAAGTGATGGAACATCAT+AGG - chr5_2:66665300-66665319 None:intergenic 40.0%
CTATGATGTTCCATCACTTG+TGG + chr5_2:66665298-66665317 Msa0782970:CDS 40.0%
GTCATACACATTGACAGCAA+TGG - chr5_2:66665357-66665376 None:intergenic 40.0%
TCGGTACCATACATCGTAAT+AGG - chr5_2:66665398-66665417 None:intergenic 40.0%
! ACGTAAGCGGTCTAGATTTT+GGG + chr5_2:66665441-66665460 Msa0782970:CDS 40.0%
! TGCATCTCATGTTTTCGTAG+TGG - chr5_2:66665470-66665489 None:intergenic 40.0%
GCTTGAACCTGGCAAAAAAA+TGG - chr5_2:66665563-66665582 None:intergenic 40.0%
ATTTCCTTGGACAGCATTCT+GGG + chr5_2:66665593-66665612 Msa0782970:CDS 40.0%
GGTAATAACAAATACCCCCA+AGG - chr5_2:66665622-66665641 None:intergenic 40.0%
TTTCCGATGGCAAGAATGTT+AGG + chr5_2:66665810-66665829 Msa0782970:intron 40.0%
CCAACAAGTGTTTACCAGAT+GGG - chr5_2:66666073-66666092 None:intergenic 40.0%
ATCAACATTTGCAGCATACC+TGG - chr5_2:66666124-66666143 None:intergenic 40.0%
AGGTATGCTGCAAATGTTGA+TGG + chr5_2:66666123-66666142 Msa0782970:intron 40.0%
! TGACCTTGATGACAATCAGA+TGG + chr5_2:66666150-66666169 Msa0782970:CDS 40.0%
TCTCTATCAAGCTAAGATCG+AGG + chr5_2:66666231-66666250 Msa0782970:CDS 40.0%
GTCCGATGAAAAAGGAATTG+AGG + chr5_2:66666333-66666352 Msa0782970:CDS 40.0%
TGAATGCCGAGATAATTGGA+GGG - chr5_2:66666396-66666415 None:intergenic 40.0%
AGACTGAATGCCGAGATAAT+TGG - chr5_2:66666400-66666419 None:intergenic 40.0%
CCAACTGTACTCAACCAAAA+AGG - chr5_2:66666447-66666466 None:intergenic 40.0%
!!! CCTTTTTGGTTGAGTACAGT+TGG + chr5_2:66666444-66666463 Msa0782970:intron 40.0%
CAAGTACCTGAAGTTGTCAT+CGG + chr5_2:66666484-66666503 Msa0782970:intron 40.0%
!! ATCATCTCTTTTAGCTGCTG+CGG + chr5_2:66666586-66666605 Msa0782970:intron 40.0%
! ACATTGAGTGGATTTCCTGT+AGG + chr5_2:66666785-66666804 Msa0782970:CDS 40.0%
GATTTCCTGTAGGAAACAGA+TGG + chr5_2:66666795-66666814 Msa0782970:CDS 40.0%
! CTTTTCCATCTGTTTCCTAC+AGG - chr5_2:66666803-66666822 None:intergenic 40.0%
TAGGAAACAGATGGAAAAGC+TGG + chr5_2:66666804-66666823 Msa0782970:CDS 40.0%
AGGAAACAGATGGAAAAGCT+GGG + chr5_2:66666805-66666824 Msa0782970:CDS 40.0%
!! AAATATGCGGCTTTGAGCAT+CGG - chr5_2:66666918-66666937 None:intergenic 40.0%
CAGAATCTGTGGATGAGAAA+TGG + chr5_2:66667110-66667129 Msa0782970:CDS 40.0%
ATGGCAGAAGAATAACCCTT+TGG + chr5_2:66667129-66667148 Msa0782970:CDS 40.0%
TTACTAATGCTCTCAAACCC+TGG - chr5_2:66667165-66667184 None:intergenic 40.0%
AAAGCAAGCAGATTGAAGAC+TGG - chr5_2:66667263-66667282 None:intergenic 40.0%
GGCCATGATTCTTATAGACA+AGG + chr5_2:66667431-66667450 Msa0782970:CDS 40.0%
! TTTAGCTCCTTCTGCTCATT+GGG - chr5_2:66667573-66667592 None:intergenic 40.0%
! TTGTTTTCTCCCAGTTCCAA+GGG - chr5_2:66667670-66667689 None:intergenic 40.0%
!! TTTGTTTTCTCCCAGTTCCA+AGG - chr5_2:66667671-66667690 None:intergenic 40.0%
GTGAACAGAAAAGTTGCAGA+AGG + chr5_2:66667765-66667784 Msa0782970:CDS 40.0%
!! GAAGGTGTTCTGCGAAAATA+TGG + chr5_2:66667783-66667802 Msa0782970:CDS 40.0%
TTACCTCGTTCTCCATATAC+CGG - chr5_2:66668031-66668050 None:intergenic 40.0%
AATTGCTTGTGGGGAAGAAT+TGG + chr5_2:66668058-66668077 Msa0782970:CDS 40.0%
GAAGAATTGGCAGAGATGTT+TGG + chr5_2:66668071-66668090 Msa0782970:CDS 40.0%
TCAGCTGTCATAGCTAGTAT+TGG - chr5_2:66668119-66668138 None:intergenic 40.0%
ATGCAGAATTCTGCTTTCGA+AGG - chr5_2:66668326-66668345 None:intergenic 40.0%
!! TGCATAATGGATCTCAGCTA+TGG + chr5_2:66668341-66668360 Msa0782970:intron 40.0%
TACATGGAATCACTCATTGC+AGG + chr5_2:66668630-66668649 Msa0782970:CDS 40.0%
!! TCATGAGTTGGTCTAAGAAC+AGG + chr5_2:66668959-66668978 Msa0782970:intron 40.0%
! TGTTCCTTTTCTCAGCGTTA+TGG - chr5_2:66668987-66669006 None:intergenic 40.0%
AATTGCTTCACTGCACCTAA+TGG + chr5_2:66669497-66669516 Msa0782970:intron 40.0%
!!! GAGAGCGCTTTTTAAATGAG+AGG - chr5_2:66669909-66669928 None:intergenic 40.0%
TGGTTGTTCAGAGTTGAGTG+AGG + chr5_2:66661881-66661900 Msa0782970:five_prime_UTR 45.0%
!! GGTTTGGTGAGAGAGATTCT+GGG + chr5_2:66662220-66662239 Msa0782970:five_prime_UTR 45.0%
!! TTGTTGCTATAGGGAGCGTT+TGG + chr5_2:66662541-66662560 Msa0782970:CDS 45.0%
!!! GTTTTGGCTTCCTTGTTCTC+AGG + chr5_2:66662672-66662691 Msa0782970:CDS 45.0%
CTGATCTGATCCTGAGAACA+AGG - chr5_2:66662685-66662704 None:intergenic 45.0%
CTTGTTCTCAGGATCAGATC+AGG + chr5_2:66662683-66662702 Msa0782970:CDS 45.0%
! CTCAGCACTTTTGTCCGATT+TGG + chr5_2:66663080-66663099 Msa0782970:CDS 45.0%
! TTGGTTAACGTTTTGCTCCG+TGG + chr5_2:66663099-66663118 Msa0782970:CDS 45.0%
! TAACGTTTTGCTCCGTGGAA+AGG + chr5_2:66663104-66663123 Msa0782970:CDS 45.0%
GTGCATGTTTGCTTCCACAT+TGG + chr5_2:66663274-66663293 Msa0782970:intron 45.0%
TGTTTGCTTCCACATTGGTG+TGG + chr5_2:66663279-66663298 Msa0782970:intron 45.0%
CATTCAACTCCACACCAATG+TGG - chr5_2:66663291-66663310 None:intergenic 45.0%
TTGGTGTGGAGTTGAATGTG+CGG + chr5_2:66663293-66663312 Msa0782970:intron 45.0%
CGACAAACTCAAAGTGTGGT+TGG - chr5_2:66663365-66663384 None:intergenic 45.0%
GCTTCGACAAACTCAAAGTG+TGG - chr5_2:66663369-66663388 None:intergenic 45.0%
ATACTGTCCCACAAGTTGTC+TGG + chr5_2:66663822-66663841 Msa0782970:CDS 45.0%
CGGATTCAACATTGTATGCC+CGG + chr5_2:66663912-66663931 Msa0782970:CDS 45.0%
TTGTATGCCCGGTCATTCAA+AGG + chr5_2:66663923-66663942 Msa0782970:CDS 45.0%
ACCAGTAGCCTTTGAATGAC+CGG - chr5_2:66663934-66663953 None:intergenic 45.0%
GTCATTCAAAGGCTACTGGT+TGG + chr5_2:66663934-66663953 Msa0782970:CDS 45.0%
! ATTCAAAGGCTACTGGTTGG+CGG + chr5_2:66663937-66663956 Msa0782970:CDS 45.0%
!! TTGGAATCCTTGGTTCTGCA+TGG + chr5_2:66663991-66664010 Msa0782970:CDS 45.0%
ACACAAGAATAGCGAGAGCA+TGG - chr5_2:66664133-66664152 None:intergenic 45.0%
GTATGTTACCTGGTCAACTG+CGG - chr5_2:66664183-66664202 None:intergenic 45.0%
!! CTCTTATTGGGGTATTGCCT+CGG + chr5_2:66664219-66664238 Msa0782970:intron 45.0%
!! TCTTATTGGGGTATTGCCTC+GGG + chr5_2:66664220-66664239 Msa0782970:intron 45.0%
AATATGAACTAGCAGACCCG+AGG - chr5_2:66664239-66664258 None:intergenic 45.0%
TTTGAGAGGCCACTTACTAG+TGG + chr5_2:66664421-66664440 Msa0782970:CDS 45.0%
TATTCATCTTGAATGGGCGC+TGG - chr5_2:66664577-66664596 None:intergenic 45.0%
GTATCCATCGACATGATGTC+AGG + chr5_2:66664637-66664656 Msa0782970:CDS 45.0%
GTGTGATAGCAAGCTAAGAG+AGG - chr5_2:66664672-66664691 None:intergenic 45.0%
GTAGCTTCAATACGCTGTTC+AGG - chr5_2:66664976-66664995 None:intergenic 45.0%
ACAGCGTATTGAAGCTACTG+TGG + chr5_2:66664978-66664997 Msa0782970:intron 45.0%
CAGCGTATTGAAGCTACTGT+GGG + chr5_2:66664979-66664998 Msa0782970:intron 45.0%
AGCGTATTGAAGCTACTGTG+GGG + chr5_2:66664980-66664999 Msa0782970:intron 45.0%
GTGATGTGGCAACACATCAT+AGG - chr5_2:66665080-66665099 None:intergenic 45.0%
CCCAGATACCTTCCAATACA+TGG - chr5_2:66665272-66665291 None:intergenic 45.0%
AGAAGCTTGTCCACAAGTGA+TGG - chr5_2:66665311-66665330 None:intergenic 45.0%
!! GGTACCGATGTTCTTGATAC+TGG + chr5_2:66665410-66665429 Msa0782970:CDS 45.0%
! ACTGGCTTACTACACGTAAG+CGG + chr5_2:66665428-66665447 Msa0782970:CDS 45.0%
! CACGTAAGCGGTCTAGATTT+TGG + chr5_2:66665440-66665459 Msa0782970:CDS 45.0%
! CGTAAGCGGTCTAGATTTTG+GGG + chr5_2:66665442-66665461 Msa0782970:CDS 45.0%
GAAAACATGAGATGCACTGC+AGG + chr5_2:66665474-66665493 Msa0782970:CDS 45.0%
AGCATATGCCTCCATTTCCT+TGG + chr5_2:66665580-66665599 Msa0782970:CDS 45.0%
AATGCTGTCCAAGGAAATGG+AGG - chr5_2:66665591-66665610 None:intergenic 45.0%
CAGAATGCTGTCCAAGGAAA+TGG - chr5_2:66665594-66665613 None:intergenic 45.0%
CATTTCCTTGGACAGCATTC+TGG + chr5_2:66665592-66665611 Msa0782970:CDS 45.0%
TGCAGATGTCGCAAAATCTC+AGG + chr5_2:66665740-66665759 Msa0782970:CDS 45.0%
CGACAGTTTCACATGAGATC+AGG + chr5_2:66665987-66666006 Msa0782970:CDS 45.0%
GAGATCAGGACTCCAATGAA+TGG + chr5_2:66666001-66666020 Msa0782970:CDS 45.0%
CCCATCTGGTAAACACTTGT+TGG + chr5_2:66666070-66666089 Msa0782970:intron 45.0%
GCCAACAAGTGTTTACCAGA+TGG - chr5_2:66666074-66666093 None:intergenic 45.0%
TATCAAGCTAAGATCGAGGC+AGG + chr5_2:66666235-66666254 Msa0782970:CDS 45.0%
CTGAATGCCGAGATAATTGG+AGG - chr5_2:66666397-66666416 None:intergenic 45.0%
CGATGACAACTTCAGGTACT+TGG - chr5_2:66666486-66666505 None:intergenic 45.0%
GAAGAGTCCACTTCACATCA+TGG + chr5_2:66666703-66666722 Msa0782970:intron 45.0%
ACTGCATCCATGATGTGAAG+TGG - chr5_2:66666713-66666732 None:intergenic 45.0%
CCTCGACTGTTACTAGTAGT+TGG - chr5_2:66666874-66666893 None:intergenic 45.0%
CCAACTACTAGTAACAGTCG+AGG + chr5_2:66666871-66666890 Msa0782970:CDS 45.0%
GAACTATCAGCCTGCATGAA+AGG - chr5_2:66666944-66666963 None:intergenic 45.0%
AGTTCCACATCGCGAACATA+CGG + chr5_2:66666959-66666978 Msa0782970:CDS 45.0%
ACATACGGTGGAACTGGAAT+AGG + chr5_2:66666974-66666993 Msa0782970:CDS 45.0%
ATCCAATTTCTCCTCCCATG+AGG - chr5_2:66667027-66667046 None:intergenic 45.0%
TAGAAGAAAAATCCGGGCTG+AGG + chr5_2:66667189-66667208 Msa0782970:CDS 45.0%
TTACACGATATCACCTGCAG+AGG + chr5_2:66667212-66667231 Msa0782970:CDS 45.0%
GATCAGTTGTACCGGACATT+AGG + chr5_2:66667347-66667366 Msa0782970:intron 45.0%
! GCGTCGACATACTGAAAGAA+TGG - chr5_2:66667407-66667426 None:intergenic 45.0%
TTTCAGTATGTCGACGCAGT+TGG + chr5_2:66667410-66667429 Msa0782970:intron 45.0%
AGACAAGGATTCTTGGGACA+AGG + chr5_2:66667446-66667465 Msa0782970:CDS 45.0%
GTGGCCAGGAGAAAAATCTT+TGG - chr5_2:66667540-66667559 None:intergenic 45.0%
TTAGCTCCTTCTGCTCATTG+GGG - chr5_2:66667572-66667591 None:intergenic 45.0%
! CTTTAGCTCCTTCTGCTCAT+TGG - chr5_2:66667574-66667593 None:intergenic 45.0%
CAGAAGGAGCTAAAGTCAGT+TGG + chr5_2:66667579-66667598 Msa0782970:CDS 45.0%
TACAGAGAATCCCTTGGAAC+TGG + chr5_2:66667657-66667676 Msa0782970:CDS 45.0%
ACAGAGAATCCCTTGGAACT+GGG + chr5_2:66667658-66667677 Msa0782970:CDS 45.0%
GGATCTCCAAATGCCAGAAA+TGG + chr5_2:66667887-66667906 Msa0782970:CDS 45.0%
CTCCAAATGCCAGAAATGGA+CGG + chr5_2:66667891-66667910 Msa0782970:CDS 45.0%
TCCAAATGCCAGAAATGGAC+GGG + chr5_2:66667892-66667911 Msa0782970:CDS 45.0%
!!! GTTGCAGTTTTGAGGTGACT+AGG + chr5_2:66668000-66668019 Msa0782970:intron 45.0%
TTGAGGTGACTAGGCTAATC+CGG + chr5_2:66668009-66668028 Msa0782970:CDS 45.0%
GACTAGGCTAATCCGGTATA+TGG + chr5_2:66668016-66668035 Msa0782970:CDS 45.0%
AATCCGGTATATGGAGAACG+AGG + chr5_2:66668025-66668044 Msa0782970:CDS 45.0%
CTACTACAGCTGATGCAACT+CGG + chr5_2:66668300-66668319 Msa0782970:intron 45.0%
GTGTCGTGTTTCATCATCCT+TGG + chr5_2:66668381-66668400 Msa0782970:intron 45.0%
TGGAAAAAGAGAAAGGGTGG+AGG - chr5_2:66668887-66668906 None:intergenic 45.0%
GAGTGGAAAAAGAGAAAGGG+TGG - chr5_2:66668890-66668909 None:intergenic 45.0%
CTGTTCTTCTCTCTGACGTT+CGG + chr5_2:66668909-66668928 Msa0782970:intron 45.0%
GGAACCATAACGCTGAGAAA+AGG + chr5_2:66668980-66668999 Msa0782970:intron 45.0%
TCGTCCTTGTTCCTATTCGT+CGG + chr5_2:66669166-66669185 Msa0782970:intron 45.0%
TGAGGAAGAGGAATAGATGC+AGG + chr5_2:66669803-66669822 Msa0782970:intron 45.0%
GGGGCTAAGATGGAAAGAAA+TGG + chr5_2:66670075-66670094 Msa0782970:three_prime_UTR 45.0%
!!! TTTGATTTAATTAAAAATAA+TGG - chr5_2:66662799-66662818 None:intergenic 5.0%
!! ATATATATATATATATATAG+AGG + chr5_2:66668742-66668761 Msa0782970:intron 5.0%
!! TATATATATATATATATAGA+GGG + chr5_2:66668743-66668762 Msa0782970:intron 5.0%
!!! ATTTCATATTATTTTTAAAT+TGG + chr5_2:66669276-66669295 Msa0782970:intron 5.0%
!! GGGTTTGGTGAGAGAGATTC+TGG + chr5_2:66662219-66662238 Msa0782970:five_prime_UTR 50.0%
ATCCACCTGCTCCACAAAAG+CGG + chr5_2:66663892-66663911 Msa0782970:CDS 50.0%
!! TGAATCCGCTTTTGTGGAGC+AGG - chr5_2:66663900-66663919 None:intergenic 50.0%
CCAGTAGCCTTTGAATGACC+GGG - chr5_2:66663933-66663952 None:intergenic 50.0%
GGCTCTCTCATCACACATAG+TGG - chr5_2:66664069-66664088 None:intergenic 50.0%
! GAATAGCGAGAGCATGGACA+TGG - chr5_2:66664127-66664146 None:intergenic 50.0%
CTGCGGAAGGATGTTTACCA+TGG - chr5_2:66664166-66664185 None:intergenic 50.0%
CAGAGAGTTCGGCATTTGAG+AGG + chr5_2:66664407-66664426 Msa0782970:CDS 50.0%
CTTCCCTGACATCATGTCGA+TGG - chr5_2:66664644-66664663 None:intergenic 50.0%
CATCGACATGATGTCAGGGA+AGG + chr5_2:66664642-66664661 Msa0782970:CDS 50.0%
!!! ATTTTGCGAGCAAGGGCATC+TGG + chr5_2:66664847-66664866 Msa0782970:CDS 50.0%
!! GACAGCAATGGTTTGCTGAC+AGG - chr5_2:66665345-66665364 None:intergenic 50.0%
! TGGAGGCATATGCTTGAACC+TGG - chr5_2:66665574-66665593 None:intergenic 50.0%
ACAGCATTCTGGGCATCCTT+GGG + chr5_2:66665603-66665622 Msa0782970:CDS 50.0%
ACCACTCGTGTGAGCAGTTT+GGG - chr5_2:66666182-66666201 None:intergenic 50.0%
TACCACTCGTGTGAGCAGTT+TGG - chr5_2:66666183-66666202 None:intergenic 50.0%
GGCAGGCAAACTAGAACTTG+AGG + chr5_2:66666252-66666271 Msa0782970:CDS 50.0%
CTAGTAACAGTCGAGGACAC+TGG + chr5_2:66666878-66666897 Msa0782970:CDS 50.0%
ACAGTCGAGGACACTGGTAT+AGG + chr5_2:66666884-66666903 Msa0782970:CDS 50.0%
TGTCTAGTTGACCTCATGGG+AGG + chr5_2:66667013-66667032 Msa0782970:CDS 50.0%
GACCTCATGGGAGGAGAAAT+TGG + chr5_2:66667022-66667041 Msa0782970:CDS 50.0%
TCTCAAACCCTGGAACTCAG+AGG - chr5_2:66667155-66667174 None:intergenic 50.0%
GATATCGTGTAACCTCAGCC+CGG - chr5_2:66667204-66667223 None:intergenic 50.0%
ACGATATCACCTGCAGAGGT+TGG + chr5_2:66667216-66667235 Msa0782970:CDS 50.0%
CGATATCACCTGCAGAGGTT+GGG + chr5_2:66667217-66667236 Msa0782970:CDS 50.0%
CAAGGACAGAATGGCGTCAA+AGG + chr5_2:66667498-66667517 Msa0782970:CDS 50.0%
CGCAACTACAGAGAATCCCT+TGG + chr5_2:66667651-66667670 Msa0782970:CDS 50.0%
TGGAGCAGTAGTTACCTGTG+TGG + chr5_2:66667803-66667822 Msa0782970:CDS 50.0%
AGCAGTAGTTACCTGTGTGG+AGG + chr5_2:66667806-66667825 Msa0782970:CDS 50.0%
GCAGTAGTTACCTGTGTGGA+GGG + chr5_2:66667807-66667826 Msa0782970:CDS 50.0%
!! ACCCGTCCATTTCTGGCATT+TGG - chr5_2:66667896-66667915 None:intergenic 50.0%
AGAGCAACTCTATACGGCAG+TGG + chr5_2:66668211-66668230 Msa0782970:CDS 50.0%
ATCACTCATTGCAGGAGCAG+AGG + chr5_2:66668638-66668657 Msa0782970:CDS 50.0%
CGTCAGAGAGAAGAACAGAG+TGG - chr5_2:66668907-66668926 None:intergenic 50.0%
! CAACGGGATTCAAAGCGCTA+TGG - chr5_2:66669122-66669141 None:intergenic 50.0%
TTCGCCGACGAATAGGAACA+AGG - chr5_2:66669173-66669192 None:intergenic 50.0%
TCACTACTGCGATCCATCTC+TGG - chr5_2:66669786-66669805 None:intergenic 50.0%
AGAGATGGATCGCAGTAGTG+AGG + chr5_2:66669785-66669804 Msa0782970:intron 50.0%
!! CATTTTCTGGGGGGCTAAGA+TGG + chr5_2:66670065-66670084 Msa0782970:three_prime_UTR 50.0%
! GATGAGGGTGTGTGCGATTG+TGG + chr5_2:66663743-66663762 Msa0782970:CDS 55.0%
!! ATCCGCTTTTGTGGAGCAGG+TGG - chr5_2:66663897-66663916 None:intergenic 55.0%
CCCGGTCATTCAAAGGCTAC+TGG + chr5_2:66663930-66663949 Msa0782970:CDS 55.0%
ACATCCTTCCGCAGTTGACC+AGG + chr5_2:66664172-66664191 Msa0782970:CDS 55.0%
GTTACCTGGTCAACTGCGGA+AGG - chr5_2:66664179-66664198 None:intergenic 55.0%
!! GGCGCTGGATCCAAGTTTTC+TGG - chr5_2:66664562-66664581 None:intergenic 55.0%
!! CGAGCAAGGGCATCTGGAAA+GGG + chr5_2:66664853-66664872 Msa0782970:CDS 55.0%
!! GAGCAAGGGCATCTGGAAAG+GGG + chr5_2:66664854-66664873 Msa0782970:CDS 55.0%
!! AGCAAGGGCATCTGGAAAGG+GGG + chr5_2:66664855-66664874 Msa0782970:CDS 55.0%
TGTTCAGGCGTAGCATCTGG+AGG - chr5_2:66664961-66664980 None:intergenic 55.0%
!! TGGTTTGCTGACAGGCAAGC+TGG - chr5_2:66665337-66665356 None:intergenic 55.0%
GATGCCCAGAATGCTGTCCA+AGG - chr5_2:66665600-66665619 None:intergenic 55.0%
GACAGCATTCTGGGCATCCT+TGG + chr5_2:66665602-66665621 Msa0782970:CDS 55.0%
CAGCATTCTGGGCATCCTTG+GGG + chr5_2:66665604-66665623 Msa0782970:CDS 55.0%
AGCATTCTGGGCATCCTTGG+GGG + chr5_2:66665605-66665624 Msa0782970:CDS 55.0%
GGATCGCCGATGACAACTTC+AGG - chr5_2:66666493-66666512 None:intergenic 55.0%
!! ATGCGGCTTTGAGCATCGGT+AGG - chr5_2:66666914-66666933 None:intergenic 55.0%
TCCACATCGCGAACATACGG+TGG + chr5_2:66666962-66666981 Msa0782970:CDS 55.0%
TCCACCGTATGTTCGCGATG+TGG - chr5_2:66666966-66666985 None:intergenic 55.0%
TCGCGAACATACGGTGGAAC+TGG + chr5_2:66666968-66666987 Msa0782970:CDS 55.0%
CCTGGAACTCAGAGGCCAAA+GGG - chr5_2:66667147-66667166 None:intergenic 55.0%
CCTTTGGCCTCTGAGTTCCA+GGG + chr5_2:66667145-66667164 Msa0782970:CDS 55.0%
CTGCTCATTGGGGCTAAGGT+GGG - chr5_2:66667562-66667581 None:intergenic 55.0%
TCTGCTCATTGGGGCTAAGG+TGG - chr5_2:66667563-66667582 None:intergenic 55.0%
CCTTCTGCTCATTGGGGCTA+AGG - chr5_2:66667566-66667585 None:intergenic 55.0%
CCTTAGCCCCAATGAGCAGA+AGG + chr5_2:66667563-66667582 Msa0782970:CDS 55.0%
GTAGTTACCTGTGTGGAGGG+TGG + chr5_2:66667810-66667829 Msa0782970:CDS 55.0%
TACCTGTGTGGAGGGTGGTA+AGG + chr5_2:66667815-66667834 Msa0782970:CDS 55.0%
GGGTGGTAAGGCTGCTCTTA+AGG + chr5_2:66667827-66667846 Msa0782970:CDS 55.0%
TTGCAGGAGCAGAGGTGAAC+AGG + chr5_2:66668646-66668665 Msa0782970:CDS 55.0%
CAGGAACTTCGCCGACGAAT+AGG - chr5_2:66669180-66669199 None:intergenic 55.0%
TCGGCGAAGTTCCTGTTCAC+CGG + chr5_2:66669185-66669204 Msa0782970:intron 55.0%
AGAACAGCAGCGACGAACTC+CGG - chr5_2:66669207-66669226 None:intergenic 55.0%
GGATCGCAGTAGTGAGGAAG+AGG + chr5_2:66669791-66669810 Msa0782970:intron 55.0%
!! GCGAGCAAGGGCATCTGGAA+AGG + chr5_2:66664852-66664871 Msa0782970:CDS 60.0%
CGCTGTTCAGGCGTAGCATC+TGG - chr5_2:66664964-66664983 None:intergenic 60.0%
GCCCAAACTGCTCACACGAG+TGG + chr5_2:66666178-66666197 Msa0782970:CDS 60.0%
CCCTTTGGCCTCTGAGTTCC+AGG + chr5_2:66667144-66667163 Msa0782970:CDS 60.0%
CCCTGGAACTCAGAGGCCAA+AGG - chr5_2:66667148-66667167 None:intergenic 60.0%
CAGACATGCCCAACCTCTGC+AGG - chr5_2:66667228-66667247 None:intergenic 60.0%
CTCATTGGGGCTAAGGTGGG+TGG - chr5_2:66667559-66667578 None:intergenic 60.0%
AGCCTTACCACCCTCCACAC+AGG - chr5_2:66667820-66667839 None:intergenic 60.0%
AGCGACGAACTCCGGTGAAC+AGG - chr5_2:66669199-66669218 None:intergenic 60.0%
CGTCGCTGCTGTTCTTCGTC+TGG + chr5_2:66669212-66669231 Msa0782970:intron 60.0%
TGGGGCTAAGGTGGGTGGCC+AGG - chr5_2:66667554-66667573 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 66661848 66670194 66661848 ID=Msa0782970;Name=Msa0782970
chr5_2 mRNA 66661848 66670194 66661848 ID=Msa0782970-mRNA-1;Parent=Msa0782970;Name=Msa0782970-mRNA-1;_AED=0.13;_eAED=0.13;_QI=533|0.76|0.78|1|0.92|0.85|14|225|1146
chr5_2 exon 66661848 66662704 66661848 ID=Msa0782970-mRNA-1:exon:20006;Parent=Msa0782970-mRNA-1
chr5_2 exon 66662868 66663125 66662868 ID=Msa0782970-mRNA-1:exon:20007;Parent=Msa0782970-mRNA-1
chr5_2 exon 66663741 66664193 66663741 ID=Msa0782970-mRNA-1:exon:20008;Parent=Msa0782970-mRNA-1
chr5_2 exon 66664388 66664663 66664388 ID=Msa0782970-mRNA-1:exon:20009;Parent=Msa0782970-mRNA-1
chr5_2 exon 66664832 66664905 66664832 ID=Msa0782970-mRNA-1:exon:20010;Parent=Msa0782970-mRNA-1
chr5_2 exon 66665283 66665495 66665283 ID=Msa0782970-mRNA-1:exon:20011;Parent=Msa0782970-mRNA-1
chr5_2 exon 66665575 66665761 66665575 ID=Msa0782970-mRNA-1:exon:20012;Parent=Msa0782970-mRNA-1
chr5_2 exon 66665980 66666031 66665980 ID=Msa0782970-mRNA-1:exon:20013;Parent=Msa0782970-mRNA-1
chr5_2 exon 66666125 66666354 66666125 ID=Msa0782970-mRNA-1:exon:20014;Parent=Msa0782970-mRNA-1
chr5_2 exon 66666761 66667308 66666761 ID=Msa0782970-mRNA-1:exon:20015;Parent=Msa0782970-mRNA-1
chr5_2 exon 66667416 66667913 66667416 ID=Msa0782970-mRNA-1:exon:20016;Parent=Msa0782970-mRNA-1
chr5_2 exon 66668007 66668258 66668007 ID=Msa0782970-mRNA-1:exon:20017;Parent=Msa0782970-mRNA-1
chr5_2 exon 66668605 66668699 66668605 ID=Msa0782970-mRNA-1:exon:20018;Parent=Msa0782970-mRNA-1
chr5_2 exon 66669989 66670194 66669989 ID=Msa0782970-mRNA-1:exon:20019;Parent=Msa0782970-mRNA-1
chr5_2 five_prime_UTR 66661848 66662380 66661848 ID=Msa0782970-mRNA-1:five_prime_utr;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66662381 66662704 66662381 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66662868 66663125 66662868 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66663741 66664193 66663741 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66664388 66664663 66664388 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66664832 66664905 66664832 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66665283 66665495 66665283 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66665575 66665761 66665575 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66665980 66666031 66665980 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66666125 66666354 66666125 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66666761 66667308 66666761 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66667416 66667913 66667416 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66668007 66668258 66668007 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 CDS 66668605 66668680 66668605 ID=Msa0782970-mRNA-1:cds;Parent=Msa0782970-mRNA-1
chr5_2 three_prime_UTR 66668681 66668699 66668681 ID=Msa0782970-mRNA-1:three_prime_utr;Parent=Msa0782970-mRNA-1
chr5_2 three_prime_UTR 66669989 66670194 66669989 ID=Msa0782970-mRNA-1:three_prime_utr;Parent=Msa0782970-mRNA-1
Gene Sequence

>Msa0782970

ATGTCTGTGATTGTGAATGGAAGAGTTTCTGGTTCAAATGGAAGATGTTCTTCACCAAAAATCAAGTTTTGGAAAGGAAATGAGTCTTTGCATGTGTCTAATTCTAGTACAACATGTAGGAGGATACTGTTTCTGTTGCTGTTTTGGGTTTTTGGTGCTGTTGTTGCTATAGGGAGCGTTTGGTTTATGTTTAGTACTTTCAACTTTAAGCATTTGATTAAAGAAACAGCTTGTGAAAAGAGTACACAAACCTTGTTACAACGTTACAATGTCAGTAGGAAACAGCTTCATGTTTTGGCTTCCTTGTTCTCAGGATCAGATCAGATTTTGTCCAATTGTATTGATGAAAGGAGGCTTCAAATGTTGTTAAGTAGTGGTACAGTGAACACTCCACAGTTAATGTGTCCGAAGAATTTGGGGTTACAAAAGGAGCATAGATATGTTGCAGAATCTGTAGAACAATGCCCAATTCTTGATGACTTTGTTCACATGAAGCTTGGATTATCATTCCCTTGGAAAGCATATGTAACATTGGACTCAGCACTTTTGTCCGATTTGGTTAACGTTTTGCTCCGTGGAAAGGTGATGAGGGTGTGTGCGATTGTGGATAATGTGAATTTATCTAGTTTAATTAAAGGATGTTGTTTGGTCCTTATTGGCATTATACTGTCCCACAAGTTGTCTGGCTTTTGTTTACTAAGGAAGAATCAAAAGCAGAAGGTAGTTAAGGAGCATCCACCTGCTCCACAAAAGCGGATTCAACATTGTATGCCCGGTCATTCAAAGGCTACTGGTTGGCGGAGAAAAAAGTTGCTAGTTATTTTTATGTCAGTTGGAATCCTTGGTTCTGCATGGTTATTTAGGTACATGAGTTCAGACATTGCACAAAGAAGAGAAGAAATGCTTGCCACTATGTGTGATGAGAGAGCCCGTATGTTGCAAGATCAATTTAACGTGAGCATGAACCATGTCCATGCTCTCGCTATTCTTGTGTCTACATTTCACCATGGTAAACATCCTTCCGCAGTTGACCAGAAAATATTTGGAGAATATACAGAGAGTTCGGCATTTGAGAGGCCACTTACTAGTGGTGTTGCTTATGCTTTGAAAGTTCTCCATTCTGATAGGATGCATTTTGAGAAGCAGCATGGTTGGACAATTAAGAAAATGGAAACTGAGAACGAGGCATTAGTTCAAGAATGTATTCCAGAAAACTTGGATCCAGCGCCCATTCAAGATGAATATGCACCAGTCGTATTTGCTCAAGAAACGGTTTCTCATATTGTATCCATCGACATGATGTCAGGGAAGGAGGATCGTGAGAATATTTTGCGAGCAAGGGCATCTGGAAAGGGGGTTCTGACATCCCCTTTTAAACTACTAAAGTATCTGGGTGCATCCTATGATGTTCCATCACTTGTGGACAAGCTTCTTCACCAGCTTGCCTGTCAGCAAACCATTGCTGTCAATGTGTATGACACAACTAATGCATCTGATCCTATTACGATGTATGGTACCGATGTTCTTGATACTGGCTTACTACACGTAAGCGGTCTAGATTTTGGGGATCCACTACGAAAACATGAGATGCACTGCAGGTTCAAGCATATGCCTCCATTTCCTTGGACAGCATTCTGGGCATCCTTGGGGGTATTTGTTATTACCTTTCTTCTTGGATATATATTTTATGCAGCAATAAATCGAATAGCTAAAGTGGAAGATGACTATTGTCAAATGAGAGAGCTGAAAGTTCGTGCTGAAGCTGCAGATGTCGCAAAATCTCAGTTTCTTGCGACAGTTTCACATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGACCTTGATGACAATCAGATGGATTTTGCCCAAACTGCTCACACGAGTGGTAAAGATCTTATATCGGTTATAAGCGAGGTTCTCTATCAAGCTAAGATCGAGGCAGGCAAACTAGAACTTGAGGCTGTAGCTTTTCATCCACATGCAATTCTAGATGAAGTTCTATCACTTTTCTCTGAAAAGTCCGATGAAAAAGGAATTGAGGACATGTCGGAAAGAACATGCAATACATTGAGTGGATTTCCTGTAGGAAACAGATGGAAAAGCTGGGAAAAGTTTCAAAAGTTAAATTTGGCGCATGAGTCAGAAACTATCCAACTACTAGTAACAGTCGAGGACACTGGTATAGGAATTCCTACCGATGCTCAAAGCCGCATATTTACACCTTTCATGCAGGCTGATAGTTCCACATCGCGAACATACGGTGGAACTGGAATAGGATTAAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATTGGAAGTACTTTTTCATTTACTGGAAATTTTAGAAAAGGAGAAACAGAATCTGTGGATGAGAAATGGCAGAAGAATAACCCTTTGGCCTCTGAGTTCCAGGGTTTGAGAGCATTAGTAATAGATAGAAGAAAAATCCGGGCTGAGGTTACACGATATCACCTGCAGAGGTTGGGCATGTCTGTAGATGTAAATTCCAGTCTTCAATCTGCTTGCTTTTCTATTTCTGATACTTGCAACTCAAGTATGTCGACGCAGTTGGCCATGATTCTTATAGACAAGGATTCTTGGGACAAGGAAAGTAGCATCTTATACGCAATCAAGAAACAAGGACAGAATGGCGTCAAAGGTGACTCGCTAAACTTTCCAAAGATTTTTCTCCTGGCCACCCACCTTAGCCCCAATGAGCAGAAGGAGCTAAAGTCAGTTGGTATCATAGATGATGTACTAATGAAGCCTCTTTGGCAAAGTGTTTTGATTCGCAACTACAGAGAATCCCTTGGAACTGGGAGAAAACAAATAGACAGAAAAAAAGTATCCCAACTTGAAAATTTATTGATACACAAACGAATTTTGGTGGTCGATGATAACGCAGTGAACAGAAAAGTTGCAGAAGGTGTTCTGCGAAAATATGGAGCAGTAGTTACCTGTGTGGAGGGTGGTAAGGCTGCTCTTAAGGTGCTTAAACCACCACATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGACGGTTTTGAGGTGACTAGGCTAATCCGGTATATGGAGAACGAGGTAAATGAAAAAATTGCTTGTGGGGAAGAATTGGCAGAGATGTTTGGTAACATTTCTTACTGGCACATACCAATACTAGCTATGACAGCTGATGTAACTCAAGCATCAAATGAAGAATGCAAAAAATGTGGGATGGATGACTTTGTGTCAAAGCCATTTGAAGAAGAGCAACTCTATACGGCAGTGGCACGTGTCTTCAGTTTTTGTTCACAAAAGTTGATTTCAACTGCAATATATTACATGGAATCACTCATTGCAGGAGCAGAGGTGAACAGGAGTCAAAATTAA
Protein sequence

>Msa0782970

MSVIVNGRVSGSNGRCSSPKIKFWKGNESLHVSNSSTTCRRILFLLLFWVFGAVVAIGSVWFMFSTFNFKHLIKETACEKSTQTLLQRYNVSRKQLHVLASLFSGSDQILSNCIDERRLQMLLSSGTVNTPQLMCPKNLGLQKEHRYVAESVEQCPILDDFVHMKLGLSFPWKAYVTLDSALLSDLVNVLLRGKVMRVCAIVDNVNLSSLIKGCCLVLIGIILSHKLSGFCLLRKNQKQKVVKEHPPAPQKRIQHCMPGHSKATGWRRKKLLVIFMSVGILGSAWLFRYMSSDIAQRREEMLATMCDERARMLQDQFNVSMNHVHALAILVSTFHHGKHPSAVDQKIFGEYTESSAFERPLTSGVAYALKVLHSDRMHFEKQHGWTIKKMETENEALVQECIPENLDPAPIQDEYAPVVFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKYLGASYDVPSLVDKLLHQLACQQTIAVNVYDTTNASDPITMYGTDVLDTGLLHVSGLDFGDPLRKHEMHCRFKHMPPFPWTAFWASLGVFVITFLLGYIFYAAINRIAKVEDDYCQMRELKVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQMDFAQTAHTSGKDLISVISEVLYQAKIEAGKLELEAVAFHPHAILDEVLSLFSEKSDEKGIEDMSERTCNTLSGFPVGNRWKSWEKFQKLNLAHESETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKGETESVDEKWQKNNPLASEFQGLRALVIDRRKIRAEVTRYHLQRLGMSVDVNSSLQSACFSISDTCNSSMSTQLAMILIDKDSWDKESSILYAIKKQGQNGVKGDSLNFPKIFLLATHLSPNEQKELKSVGIIDDVLMKPLWQSVLIRNYRESLGTGRKQIDRKKVSQLENLLIHKRILVVDDNAVNRKVAEGVLRKYGAVVTCVEGGKAALKVLKPPHNFDACFMDLQMPEMDGFEVTRLIRYMENEVNEKIACGEELAEMFGNISYWHIPILAMTADVTQASNEECKKCGMDDFVSKPFEEEQLYTAVARVFSFCSQKLISTAIYYMESLIAGAEVNRSQN*