AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0373860


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373860 MtrunA17_Chr3g0123361 97.052 814 15 2 8 816 3 812 0.0 1624
Msa0373860 MtrunA17_Chr4g0000571 46.967 511 192 9 20 521 20 460 2.17e-128 393
Msa0373860 MtrunA17_Chr4g0000561 46.622 444 179 9 20 449 138 537 5.78e-113 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0373860 AT1G13160.1 51.570 828 333 10 19 816 15 804 0.0 763
Msa0373860 AT4G31520.1 47.051 763 304 12 89 816 1 698 0.0 641
Msa0373860 AT4G31520.2 45.214 679 272 12 89 732 1 614 0.0 533

Find 199 sgRNAs with CRISPR-Local

Find 462 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATACACTTTCGTTGTTTA+TGG 0.108154 3_1:-72970193 Msa0373860:CDS
TGGCTTCATCCTTATGCTTT+TGG 0.189883 3_1:+72970094 None:intergenic
AGAGAGGTGTTGAGGGTAAA+AGG 0.219783 3_1:+72970429 None:intergenic
CTCATGTGACTTCTTATATA+GGG 0.264350 3_1:+72966222 None:intergenic
TCTCATGTGACTTCTTATAT+AGG 0.264450 3_1:+72966221 None:intergenic
CACCTCAAGTTATTCTTAGA+AGG 0.274420 3_1:-72969528 Msa0373860:CDS
TAAGCCTTTGGTCTTGCCTT+GGG 0.288436 3_1:+72966007 None:intergenic
AGTTCGGATTCGTAGCCTTC+AGG 0.288526 3_1:+72970601 None:intergenic
TGGGAGGAAAGCGTGGAAAT+AGG 0.291046 3_1:-72964465 Msa0373860:exon
GGCTTTATCGGCGAGATCTT+TGG 0.291467 3_1:+72970474 None:intergenic
ATGAACTTCACTTCCATTTC+CGG 0.293716 3_1:-72970520 Msa0373860:CDS
TTTATAGAATTTCTTTAGAT+TGG 0.299879 3_1:-72964282 Msa0373860:three_prime_UTR
AAAAGTTTAACAACATTAAC+TGG 0.315137 3_1:+72967154 None:intergenic
AGCAACTCAGCGAGTTTGTT+AGG 0.319583 3_1:+72970400 None:intergenic
TAGAAGGGAGACGGTTTATA+AGG 0.324057 3_1:-72969512 Msa0373860:intron
AGCGGCTGTCAAACAGAAAA+AGG 0.332497 3_1:-72965025 Msa0373860:intron
TTTGATTGCAGCAGCGGTTC+AGG 0.336211 3_1:-72966998 Msa0373860:CDS
TGAAGAGGATGGTGGGATTT+CGG 0.354594 3_1:-72965681 Msa0373860:CDS
AAGAAATAAATTTCTTCCTC+TGG 0.366191 3_1:+72964244 None:intergenic
AATTTGTAACATCTCGTTGA+TGG 0.369737 3_1:+72967019 None:intergenic
AAAGTGATAGCTCGAACAAT+TGG 0.375067 3_1:-72967183 Msa0373860:CDS
ATAAGCCTTTGGTCTTGCCT+TGG 0.384961 3_1:+72966006 None:intergenic
CCTTTAGTTCCTTGATCCTC+TGG 0.385498 3_1:+72965447 None:intergenic
AGAGAGGAACATGGCTTTAT+CGG 0.386019 3_1:+72970462 None:intergenic
GGCTTCATCATCATCACTTC+CGG 0.386181 3_1:+72965811 None:intergenic
GGTTCAGGCTTGCCATGATA+TGG 0.390505 3_1:-72966983 Msa0373860:intron
GATGGTGATCTGCATATTCT+TGG 0.390989 3_1:-72965647 Msa0373860:CDS
TTGACTTCTCCATAAGCCTT+TGG 0.392390 3_1:+72965995 None:intergenic
AAGGCAAGACCAAAGGCTTA+TGG 0.393421 3_1:-72966004 Msa0373860:CDS
AAGAATAACTTGAGGTGATT+CGG 0.393544 3_1:+72969534 None:intergenic
TGCTTTCATCATCACTATCT+TGG 0.393872 3_1:+72969572 None:intergenic
AATGTTGCGGCTGACGTTCC+TGG 0.394316 3_1:-72965974 Msa0373860:CDS
CCTCCGTCGCGGCATGGCTC+TGG 0.401059 3_1:+72970695 None:intergenic
GCTGCTCGAACACTTCCTTC+TGG 0.402199 3_1:-72970370 Msa0373860:CDS
GTCGTTGGAGATGCCGGAAA+TGG 0.407008 3_1:+72970507 None:intergenic
GTGGTGGTGGCTACGTTTCA+TGG 0.411738 3_1:+72970717 None:intergenic
GGGAGGAAAGCGTGGAAATA+GGG 0.412726 3_1:-72964464 Msa0373860:exon
TGGATATATTTCTGAAGATA+AGG 0.421960 3_1:+72967129 None:intergenic
CCCTTCACTGCTAATTAAGA+AGG 0.422140 3_1:-72966050 Msa0373860:CDS
TGAATTGACTGCGGATTAAG+AGG 0.422788 3_1:+72970578 None:intergenic
TTCATCTTTGATTGTAGTGA+TGG 0.428682 3_1:+72970631 None:intergenic
TGATTCACCATCATGATCTT+CGG 0.432423 3_1:+72965790 None:intergenic
CCAGAGGATCAAGGAACTAA+AGG 0.433159 3_1:-72965447 Msa0373860:intron
AGCTTCTCGTTGATTGCAGT+TGG 0.434838 3_1:+72964349 None:intergenic
GGAATTCAGAGAGGTGTTGA+GGG 0.438862 3_1:+72970422 None:intergenic
TATGTTTAGGCTATCACTGT+TGG 0.451491 3_1:-72966640 Msa0373860:intron
AACAAGGGCTCAACTGCATC+AGG 0.452014 3_1:+72966805 None:intergenic
CGGTATTATCACTGCCTAGC+TGG 0.453796 3_1:+72965831 None:intergenic
AAATGAGCAGGAAGATGATC+AGG 0.456808 3_1:-72965879 Msa0373860:CDS
CAGCTGCTGATTCAAGTCTC+CGG 0.457694 3_1:-72965550 Msa0373860:CDS
AGGATAAAACAGCAGCGGTC+TGG 0.462249 3_1:-72964500 Msa0373860:CDS
ATTGTTGTTGGAAGAGTTCA+AGG 0.462630 3_1:+72970548 None:intergenic
TTTATGGAGCTTCAAACGTT+AGG 0.463249 3_1:-72970177 Msa0373860:CDS
CGGCATGGCTCTGGTGGTGG+TGG 0.463339 3_1:+72970704 None:intergenic
ATTTGTAACATCTCGTTGAT+GGG 0.464321 3_1:+72967020 None:intergenic
GAAAATTACGCCAATGAACT+AGG 0.464720 3_1:+72964219 None:intergenic
TTCTTTCTCTTTGCAACTAA+CGG 0.465469 3_1:+72964548 None:intergenic
AAAAGGAGGTGAGGTGAGAG+AGG 0.467153 3_1:+72970446 None:intergenic
GGTCTTGCCTTGGGGTCAGT+AGG 0.471014 3_1:+72966016 None:intergenic
AAACCTGTGGATCTTTAAGA+TGG 0.472028 3_1:+72967503 None:intergenic
CGGGCTTTGAAGAAGTTGGC+AGG 0.472242 3_1:-72965530 Msa0373860:CDS
CTGTTGGAATAAATGCAGTC+AGG 0.474637 3_1:-72966624 Msa0373860:CDS
ACTGCGGATTAAGAGGAGTT+CGG 0.476230 3_1:+72970585 None:intergenic
AGTGGGGTCGTTGGAGATGC+CGG 0.478315 3_1:+72970501 None:intergenic
TGCTAGCTGATGTACCTTGG+TGG 0.479650 3_1:+72967629 None:intergenic
TCCTTCTTAATTAGCAGTGA+AGG 0.480554 3_1:+72966049 None:intergenic
TCGCGGCATGGCTCTGGTGG+TGG 0.485482 3_1:+72970701 None:intergenic
AGCTGCTGATTCAAGTCTCC+GGG 0.485711 3_1:-72965549 Msa0373860:CDS
GCAACTCAGCGAGTTTGTTA+GGG 0.486274 3_1:+72970401 None:intergenic
TCACAAGCGCCCTCTTGGCC+CGG 0.486460 3_1:+72969817 None:intergenic
GGATATATTTCTGAAGATAA+GGG 0.490544 3_1:+72967130 None:intergenic
GGGAATTCAGAGAGGTGTTG+AGG 0.492779 3_1:+72970421 None:intergenic
GTTCGGATTCGTAGCCTTCA+GGG 0.495722 3_1:+72970602 None:intergenic
AAACCTAGTTGATCAGAGCT+TGG 0.498249 3_1:+72965276 None:intergenic
ACGTATGAACCAAAAGCATA+AGG 0.500516 3_1:-72970103 Msa0373860:CDS
AAGTGATAGCTCGAACAATT+GGG 0.501384 3_1:-72967182 Msa0373860:CDS
TGGGGTCAGTAGGCCTCCCT+CGG 0.502050 3_1:+72966026 None:intergenic
GCGAGATCTTTGGCGACAGT+GGG 0.506577 3_1:+72970484 None:intergenic
AGGTTGGCAATGGTTAGAGC+AGG 0.507284 3_1:-72965078 Msa0373860:CDS
TCTCCGGGCTTTGAAGAAGT+TGG 0.508552 3_1:-72965534 Msa0373860:CDS
GAAATGCAATGAGCGATTTG+AGG 0.509530 3_1:-72967359 Msa0373860:intron
AAACGAACCTTGACGATGGA+TGG 0.510149 3_1:+72969721 None:intergenic
AGTTCATGGCGGATTGTTGT+TGG 0.511020 3_1:+72970536 None:intergenic
TATAAGAAGTCACATGAGAA+AGG 0.511774 3_1:-72966217 Msa0373860:CDS
GGAAATGGAAGTGAAGTTCA+TGG 0.515511 3_1:+72970522 None:intergenic
CTGCCAACTTCTTCAAAGCC+CGG 0.516353 3_1:+72965531 None:intergenic
TTATCTTCAGAAATATATCC+AGG 0.516944 3_1:-72967127 Msa0373860:intron
CCGTCGCGGCATGGCTCTGG+TGG 0.517615 3_1:+72970698 None:intergenic
GTTGGCTTAACATAAAATAG+AGG 0.517664 3_1:+72964367 None:intergenic
ATTTACAATTTGTTTAAACA+AGG 0.521288 3_1:+72966789 None:intergenic
CAGTGAAGAGGCTGATGAAG+AGG 0.523376 3_1:-72965696 Msa0373860:CDS
TATTGATGATGATGTTGAGC+AGG 0.523614 3_1:-72965933 Msa0373860:CDS
GTTTGACAGCCGCTCGAGCA+TGG 0.525793 3_1:+72965034 None:intergenic
GCTTAACAAGGAGGAGAGGT+TGG 0.526219 3_1:-72965094 Msa0373860:CDS
AAGCCTTTGGTCTTGCCTTG+GGG 0.527111 3_1:+72966008 None:intergenic
CTTAACATAAAATAGAGGTC+CGG 0.528152 3_1:+72964372 None:intergenic
ACCTCAAGTTATTCTTAGAA+GGG 0.528603 3_1:-72969527 Msa0373860:CDS
TGGTCTAAGTAACAAGCAAA+AGG 0.529533 3_1:-72964588 Msa0373860:CDS
TTTGGCGACAGTGGGGTCGT+TGG 0.532255 3_1:+72970492 None:intergenic
GATCCTCTGGAAGTCTGCAT+TGG 0.533194 3_1:+72965460 None:intergenic
CAATATGCAGTACCATATCA+TGG 0.533875 3_1:+72966971 None:intergenic
TCATCTTTGATTGTAGTGAT+GGG 0.534341 3_1:+72970632 None:intergenic
GAAATGCCTCCGTCGCGGCA+TGG 0.534644 3_1:+72970689 None:intergenic
TAGTGTCACAAGCGCCCTCT+TGG 0.536222 3_1:+72969812 None:intergenic
TACAAATTTGATTGCAGCAG+CGG 0.536492 3_1:-72967004 Msa0373860:CDS
AGAACTGCATTAGCGCAGCA+CGG 0.538011 3_1:-72965327 Msa0373860:CDS
GGATGAAGACCGGGCCAAGA+GGG 0.539973 3_1:-72969826 Msa0373860:CDS
AGGCTGATGAAGAGGATGGT+GGG 0.545198 3_1:-72965688 Msa0373860:CDS
TGCAGACTTCCAGAGGATCA+AGG 0.553115 3_1:-72965456 Msa0373860:CDS
ACGGAGGCATTTCTCCCCTC+CGG 0.553911 3_1:-72970679 Msa0373860:CDS
CCACCAGAGCCATGCCGCGA+CGG 0.554993 3_1:-72970698 Msa0373860:CDS
ATTCCAAGCTCTGATCAACT+AGG 0.555451 3_1:-72965279 Msa0373860:CDS
AGTTATTCTTAGAAGGGAGA+CGG 0.556840 3_1:-72969521 Msa0373860:CDS
GGCGAGATCTTTGGCGACAG+TGG 0.557517 3_1:+72970483 None:intergenic
CAACCATCTTAAAGATCCAC+AGG 0.558634 3_1:-72967506 Msa0373860:intron
AGAGCAGGGAGGGAGGAAAG+AGG 0.560920 3_1:-72965063 Msa0373860:CDS
GCCCTGCCAGAAAATGAAGA+TGG 0.561534 3_1:-72965491 Msa0373860:CDS
ATCTGCAACAACTCAGCACC+AGG 0.561871 3_1:+72965956 None:intergenic
ATAGGGCAAGGTCTTGAAGT+AGG 0.562189 3_1:+72966239 None:intergenic
CAAGAACTAAGATAGAGAAA+AGG 0.563545 3_1:-72964520 Msa0373860:CDS
GAACTGCATTAGCGCAGCAC+GGG 0.565852 3_1:-72965326 Msa0373860:CDS
CTAGGTTTAAAGCGAGTGGA+TGG 0.570555 3_1:-72965261 Msa0373860:CDS
TTGTTGGAAGAGTTCAAGGG+AGG 0.570603 3_1:+72970552 None:intergenic
CCTTCTTAATTAGCAGTGAA+GGG 0.572476 3_1:+72966050 None:intergenic
ATTATCAGCATCATCACCAC+TGG 0.575178 3_1:+72965733 None:intergenic
TATACTACTTGTTAATCGTG+AGG 0.577763 3_1:-72970320 Msa0373860:intron
AGTTCTCATTCTGATGATTG+CGG 0.578631 3_1:-72965908 Msa0373860:CDS
GGCAATGGTTAGAGCAGGGA+GGG 0.578720 3_1:-72965073 Msa0373860:CDS
AATAGCAAGAGGATGAAGAC+CGG 0.579663 3_1:-72969836 Msa0373860:intron
AACAACGTGGGAGGAAAGCG+TGG 0.583188 3_1:-72964472 Msa0373860:CDS
GTTGAGGGTAAAAGGAGGTG+AGG 0.584102 3_1:+72970437 None:intergenic
GAACCTTGACGATGGATGGA+AGG 0.585725 3_1:+72969725 None:intergenic
AAAAGCTTAACAAGGAGGAG+AGG 0.586507 3_1:-72965098 Msa0373860:CDS
GATATGCCTGCGTATGCCAC+TGG 0.588647 3_1:-72966599 Msa0373860:intron
CAAGGAGGAGAGGTTGGCAA+TGG 0.589667 3_1:-72965088 Msa0373860:CDS
CAGCTAGGCAGTGATAATAC+CGG 0.590821 3_1:-72965830 Msa0373860:CDS
CTTCCTTCCATCCATCGTCA+AGG 0.592039 3_1:-72969728 Msa0373860:intron
CCAGAGCCATGCCGCGACGG+AGG 0.592746 3_1:-72970695 Msa0373860:CDS
AGGATGAAGACCGGGCCAAG+AGG 0.592885 3_1:-72969827 Msa0373860:CDS
GTGACTTCTTATATAGGGCA+AGG 0.593175 3_1:+72966227 None:intergenic
GAGGCTGATGAAGAGGATGG+TGG 0.593619 3_1:-72965689 Msa0373860:CDS
TGTTGGAATAAATGCAGTCA+GGG 0.594175 3_1:-72966623 Msa0373860:CDS
TCTTTGATTGTAGTGATGGG+AGG 0.597637 3_1:+72970635 None:intergenic
TTGCGGTTCAGAAAATGAGC+AGG 0.597937 3_1:-72965891 Msa0373860:CDS
TTTCCAATGCAGACTTCCAG+AGG 0.598028 3_1:-72965463 Msa0373860:CDS
TTTACAATTTGTTTAAACAA+GGG 0.598053 3_1:+72966790 None:intergenic
AATGGTTAGAGCAGGGAGGG+AGG 0.598243 3_1:-72965070 Msa0373860:CDS
ATTTCGGAACATGAAGGAGA+TGG 0.601769 3_1:-72965665 Msa0373860:CDS
GGTGAGGTGAGAGAGGAACA+TGG 0.601814 3_1:+72970453 None:intergenic
GGTGGGATTTCGGAACATGA+AGG 0.604100 3_1:-72965671 Msa0373860:CDS
TCAACTAGGTTTAAAGCGAG+TGG 0.604947 3_1:-72965265 Msa0373860:CDS
AGAGCTACTTACTTCAAGCA+TGG 0.609650 3_1:+72965236 None:intergenic
GTTAGTTGCAAAGAGAAAGA+AGG 0.613009 3_1:-72964546 Msa0373860:CDS
GAGGTGTTGAGGGTAAAAGG+AGG 0.613387 3_1:+72970432 None:intergenic
AGGGAGGCCTACTGACCCCA+AGG 0.616449 3_1:-72966023 Msa0373860:CDS
TTTGTAACATCTCGTTGATG+GGG 0.624366 3_1:+72967021 None:intergenic
GGGCTTTGAAGAAGTTGGCA+GGG 0.625113 3_1:-72965529 Msa0373860:CDS
AAATCGTTACGAAGTCCAGA+AGG 0.627630 3_1:+72970355 None:intergenic
AAAGAATGTTCTGAAGTGCA+CGG 0.632826 3_1:+72970067 None:intergenic
TACTTACCAGTGGCATACGC+AGG 0.634401 3_1:+72966593 None:intergenic
TCTGCATATTCTTGGAAGTG+TGG 0.637853 3_1:-72965639 Msa0373860:CDS
AAGAGCGCGGATCATCTGAA+AGG 0.638139 3_1:-72967555 Msa0373860:CDS
AACTTCACAAAAGACGAACA+TGG 0.639235 3_1:-72969785 Msa0373860:CDS
TGACCCCAAGGCAAGACCAA+AGG 0.640319 3_1:-72966011 Msa0373860:CDS
ATAGCAAGAGGATGAAGACC+GGG 0.645784 3_1:-72969835 Msa0373860:intron
GATTTGATTCTGCATTCCAG+AGG 0.646076 3_1:-72964260 Msa0373860:three_prime_UTR
ACATGACCGCTCACGTCCAG+AGG 0.646176 3_1:-72966758 Msa0373860:intron
TCTGACGATGACAACCAGCT+AGG 0.648692 3_1:-72965845 Msa0373860:CDS
TGCTAATTAAGAAGGACCGA+GGG 0.650296 3_1:-72966042 Msa0373860:CDS
TGATCTAGAAGACAGTGAAG+AGG 0.650869 3_1:-72965708 Msa0373860:CDS
GGTTGGCAATGGTTAGAGCA+GGG 0.652549 3_1:-72965077 Msa0373860:CDS
GAAGTTGGCAGGGACAACAA+TGG 0.655026 3_1:-72965519 Msa0373860:CDS
CTGCTAATTAAGAAGGACCG+AGG 0.659236 3_1:-72966043 Msa0373860:CDS
AGGACAGTACCATGCTCGAG+CGG 0.659615 3_1:-72965043 Msa0373860:CDS
TTGTTGTTGGAAGAGTTCAA+GGG 0.662039 3_1:+72970549 None:intergenic
CTGGTAAACAACAACGTGGG+AGG 0.662104 3_1:-72964481 Msa0373860:CDS
AAGATGAAATGCGACCCTGA+AGG 0.662503 3_1:-72970616 Msa0373860:CDS
TAATTAAGAAGGACCGAGGG+AGG 0.664397 3_1:-72966039 Msa0373860:CDS
TGGCAATGGTTAGAGCAGGG+AGG 0.665731 3_1:-72965074 Msa0373860:CDS
AGAAAAGGATAAAACAGCAG+CGG 0.669573 3_1:-72964505 Msa0373860:CDS
AAGGGCTCAACTGCATCAGG+AGG 0.671557 3_1:+72966808 None:intergenic
TTATGGAGAAGTCAATGTTG+CGG 0.672631 3_1:-72965987 Msa0373860:CDS
AGTTGCAAAGAGAAAGAAGG+TGG 0.672753 3_1:-72964543 Msa0373860:CDS
GGGGAGAAATGCCTCCGTCG+CGG 0.674537 3_1:+72970684 None:intergenic
TAAAGACCTCTGGACGTGAG+CGG 0.676998 3_1:+72966752 None:intergenic
TGATGATGAAAGCAGTGACG+AGG 0.678657 3_1:-72969563 Msa0373860:CDS
TCTCATTACATTATTCCGAG+AGG 0.680546 3_1:-72966173 Msa0373860:intron
GTTTGTTAGGGAATTCAGAG+AGG 0.681328 3_1:+72970413 None:intergenic
GGGAGGAATTGAATTGACTG+CGG 0.685428 3_1:+72970569 None:intergenic
CGGTCTGGTAAACAACAACG+TGG 0.692778 3_1:-72964485 Msa0373860:CDS
GGATCTTTAAGATGGTTGAG+TGG 0.692797 3_1:+72967511 None:intergenic
GAAGAGGCTGATGAAGAGGA+TGG 0.693614 3_1:-72965692 Msa0373860:CDS
TCCCTTCTAAGAATAACTTG+AGG 0.695578 3_1:+72969526 None:intergenic
AGTTCTGATTACGAAACCAG+TGG 0.696679 3_1:-72965749 Msa0373860:CDS
GATGAAGCCGAAGATCATGA+TGG 0.710456 3_1:-72965797 Msa0373860:CDS
GAACAAACGAACCTTGACGA+TGG 0.716292 3_1:+72969717 None:intergenic
CGAGATCTTTGGCGACAGTG+GGG 0.730021 3_1:+72970485 None:intergenic
GGTCTGGTAAACAACAACGT+GGG 0.766215 3_1:-72964484 Msa0373860:CDS
AATGGAAGTGAAGTTCATGG+CGG 0.785076 3_1:+72970525 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAGTTTAAATTTGTTTTTA+AGG - chr3_1:72965021-72965040 Msa0373860:intron 10.0%
!! ATATATTTGAAGAAATAATT+TGG - chr3_1:72966251-72966270 Msa0373860:CDS 10.0%
!! TATATTTGAAGAAATAATTT+GGG - chr3_1:72966252-72966271 Msa0373860:CDS 10.0%
!! GAGACATAAATATAATATTT+AGG + chr3_1:72965346-72965365 None:intergenic 15.0%
!! ATATTTGAAGAAATAATTTG+GGG - chr3_1:72966253-72966272 Msa0373860:CDS 15.0%
!!! GTTTTCATATACAATAATAT+AGG + chr3_1:72967694-72967713 None:intergenic 15.0%
!!! ATTTGTTTACTTTTATTCAT+AGG - chr3_1:72969634-72969653 Msa0373860:intron 15.0%
!!! ATATTTTTAAAAATGAGCAA+GGG + chr3_1:72970010-72970029 None:intergenic 15.0%
!! TTTATAGAATTTCTTTAGAT+TGG - chr3_1:72970716-72970735 Msa0373860:CDS 15.0%
!!! GATTTTTGTTTTTGTTTTTC+TGG - chr3_1:72965043-72965062 Msa0373860:CDS 20.0%
!!! GAGTTTTTTTTTTTAATACC+AGG - chr3_1:72965320-72965339 Msa0373860:CDS 20.0%
!! ATAAATATAATATTTAGGCC+TGG + chr3_1:72965341-72965360 None:intergenic 20.0%
!! TATATTTAGAAGTTCAGAAA+AGG - chr3_1:72965668-72965687 Msa0373860:CDS 20.0%
!! ATATTTAGAAGTTCAGAAAA+GGG - chr3_1:72965669-72965688 Msa0373860:CDS 20.0%
!! TTTAATTAACAAGAAATGCT+TGG - chr3_1:72966983-72967002 Msa0373860:intron 20.0%
!!! AATCACACTTTCAAAATTTT+AGG - chr3_1:72967775-72967794 Msa0373860:intron 20.0%
!! AAAAGTTTAACAACATTAAC+TGG + chr3_1:72967847-72967866 None:intergenic 20.0%
!!! CATATTTTTAAAAATGAGCA+AGG + chr3_1:72970011-72970030 None:intergenic 20.0%
!!! TTAATTGTCTTATGCATTTT+TGG - chr3_1:72970052-72970071 Msa0373860:intron 20.0%
!! AAAAAAATACACATCCATAT+TGG + chr3_1:72970370-72970389 None:intergenic 20.0%
!!! TTTTTTTTGTATTGAACAGA+CGG - chr3_1:72970386-72970405 Msa0373860:CDS 20.0%
! GGAAATGGAAATTTGTATAT+TGG - chr3_1:72964736-72964755 Msa0373860:intron 25.0%
!!! TTTCATTTTTTTGTTGTGTG+TGG - chr3_1:72964759-72964778 Msa0373860:intron 25.0%
! TGTAAAATTTGAATAGCAAG+AGG - chr3_1:72965151-72965170 Msa0373860:intron 25.0%
! ATTTAAACTTGAAATGCCAT+TGG + chr3_1:72965835-72965854 None:intergenic 25.0%
!!! TTCTTTTCTTCTAACTTGTA+AGG + chr3_1:72965973-72965992 None:intergenic 25.0%
!! CAAGTTAGCTAAAATTTTCA+AGG - chr3_1:72966150-72966169 Msa0373860:intron 25.0%
! TTGCTTATTTGCTCATTTAA+GGG + chr3_1:72966191-72966210 None:intergenic 25.0%
!!! TTCATAGAAGCTTTAGAATT+AGG - chr3_1:72966225-72966244 Msa0373860:CDS 25.0%
! TGGTATTCTGTTATATCATT+TGG - chr3_1:72966317-72966336 Msa0373860:intron 25.0%
! GGTATTCTGTTATATCATTT+GGG - chr3_1:72966318-72966337 Msa0373860:intron 25.0%
! TTATATCATTTGGGTAGTAT+AGG - chr3_1:72966327-72966346 Msa0373860:intron 25.0%
! TATATCATTTGGGTAGTATA+GGG - chr3_1:72966328-72966347 Msa0373860:intron 25.0%
! ATGTTAACATTCAACTCAAA+TGG + chr3_1:72966467-72966486 None:intergenic 25.0%
! AATTTACGTTCTATTCACTT+AGG - chr3_1:72966498-72966517 Msa0373860:intron 25.0%
! AATACAAAATCCTCCTAATT+TGG - chr3_1:72966627-72966646 Msa0373860:CDS 25.0%
! ATACAAAATCCTCCTAATTT+GGG - chr3_1:72966628-72966647 Msa0373860:CDS 25.0%
! AACTTAGTTATCAGTAATCA+TGG - chr3_1:72967320-72967339 Msa0373860:intron 25.0%
! ACTTAGTTATCAGTAATCAT+GGG - chr3_1:72967321-72967340 Msa0373860:intron 25.0%
!! GGTCATTCTTACAAAATTTT+AGG - chr3_1:72967342-72967361 Msa0373860:intron 25.0%
! CTAGCAAAAAGAAAAAGAAA+AGG - chr3_1:72967386-72967405 Msa0373860:CDS 25.0%
!! TTTTCATGTTACGTATTATG+CGG + chr3_1:72967420-72967439 None:intergenic 25.0%
! TACAAAAATTTACAAACCTG+TGG + chr3_1:72967511-72967530 None:intergenic 25.0%
! AATCATTGGAAGATTTCAAA+AGG + chr3_1:72967725-72967744 None:intergenic 25.0%
! ATTGTACAAACCAGTAAATA+TGG + chr3_1:72967758-72967777 None:intergenic 25.0%
!! GGATATATTTCTGAAGATAA+GGG + chr3_1:72967871-72967890 None:intergenic 25.0%
!! TGGATATATTTCTGAAGATA+AGG + chr3_1:72967872-72967891 None:intergenic 25.0%
! TTATCTTCAGAAATATATCC+AGG - chr3_1:72967871-72967890 Msa0373860:intron 25.0%
! CAAATTTAACTAAAGATACC+TGG + chr3_1:72967892-72967911 None:intergenic 25.0%
! CAGGTATCTTTAGTTAAATT+TGG - chr3_1:72967890-72967909 Msa0373860:intron 25.0%
! TTTGTATCCTATTTCATTCA+AGG - chr3_1:72968146-72968165 Msa0373860:intron 25.0%
! AATATCACCTTGAATGAAAT+AGG + chr3_1:72968156-72968175 None:intergenic 25.0%
!! TTCATTCAAGGTGATATTTT+TGG - chr3_1:72968158-72968177 Msa0373860:intron 25.0%
!!! GGATATAGTTTTAAGCAAAA+GGG + chr3_1:72968657-72968676 None:intergenic 25.0%
!!! AGGATATAGTTTTAAGCAAA+AGG + chr3_1:72968658-72968677 None:intergenic 25.0%
! CACAATCAAAATATCAACAT+AGG + chr3_1:72968717-72968736 None:intergenic 25.0%
!!! CTATGTTGATATTTTGATTG+TGG - chr3_1:72968715-72968734 Msa0373860:intron 25.0%
!!! ATTTTAGCTTACTGAATAAG+AGG + chr3_1:72969585-72969604 None:intergenic 25.0%
! TGTAAAGAAAAAGCTTAACA+AGG - chr3_1:72969892-72969911 Msa0373860:intron 25.0%
!! AATTCTAGATGTCATGTTTT+GGG + chr3_1:72970095-72970114 None:intergenic 25.0%
!! AAATTCTAGATGTCATGTTT+TGG + chr3_1:72970096-72970115 None:intergenic 25.0%
! TGTTATATTTGGAGAATCAT+TGG + chr3_1:72970128-72970147 None:intergenic 25.0%
!!! TTTTTTTGTATTGAACAGAC+GGG - chr3_1:72970387-72970406 Msa0373860:CDS 25.0%
!!! AGAATGTACCATTTTTTTTC+CGG - chr3_1:72970607-72970626 Msa0373860:CDS 25.0%
! AAGAAATAAATTTCTTCCTC+TGG + chr3_1:72970757-72970776 None:intergenic 25.0%
!! TATTTCTTTTCCTAGTTCAT+TGG - chr3_1:72970769-72970788 Msa0373860:five_prime_UTR 25.0%
TCATCTTTGATTGTAGTGAT+GGG + chr3_1:72964369-72964388 None:intergenic 30.0%
TTCATCTTTGATTGTAGTGA+TGG + chr3_1:72964370-72964389 None:intergenic 30.0%
! TATACTACTTGTTAATCGTG+AGG - chr3_1:72964678-72964697 Msa0373860:intron 30.0%
!! TGTTGAGTTTGTTATGTGAT+TGG - chr3_1:72964715-72964734 Msa0373860:intron 30.0%
!! GTTTGTTATGTGATTGGAAA+TGG - chr3_1:72964721-72964740 Msa0373860:intron 30.0%
AGATACACTTTCGTTGTTTA+TGG - chr3_1:72964805-72964824 Msa0373860:intron 30.0%
CTAACTTAGAATTGTGTGTT+TGG + chr3_1:72965121-72965140 None:intergenic 30.0%
CACAATTCTAAGTTAGTGAA+TGG - chr3_1:72965125-72965144 Msa0373860:intron 30.0%
AAGAATAACTTGAGGTGATT+CGG + chr3_1:72965467-72965486 None:intergenic 30.0%
ACCTCAAGTTATTCTTAGAA+GGG - chr3_1:72965471-72965490 Msa0373860:CDS 30.0%
! TACTCTGTTTGAGTTTAGAA+AGG + chr3_1:72965601-72965620 None:intergenic 30.0%
!! ATAGTGGCATTGATTATCTA+AGG - chr3_1:72965644-72965663 Msa0373860:CDS 30.0%
ACGAACAAAAGAGTGATATT+TGG + chr3_1:72965776-72965795 None:intergenic 30.0%
TGGCACTTCCAAAAAAATAA+GGG + chr3_1:72965815-72965834 None:intergenic 30.0%
TTGGCACTTCCAAAAAAATA+AGG + chr3_1:72965816-72965835 None:intergenic 30.0%
!!! TATTTTTTTGGAAGTGCCAA+TGG - chr3_1:72965816-72965835 Msa0373860:CDS 30.0%
TTATTTATGAACTTGCGTAG+TGG + chr3_1:72965885-72965904 None:intergenic 30.0%
AAGAAAAGAATTCAGATCGA+AGG - chr3_1:72965983-72966002 Msa0373860:CDS 30.0%
TGCATGTGCAAAGTTAAATA+TGG + chr3_1:72966029-72966048 None:intergenic 30.0%
! TATTTAACTTTGCACATGCA+CGG - chr3_1:72966029-72966048 Msa0373860:CDS 30.0%
GCTATGTATTCTATTTACCA+AGG + chr3_1:72966098-72966117 None:intergenic 30.0%
CTTGCTTATTTGCTCATTTA+AGG + chr3_1:72966192-72966211 None:intergenic 30.0%
GTGATTAATATCGAATGATG+TGG - chr3_1:72966297-72966316 Msa0373860:intron 30.0%
ATATCATTTGGGTAGTATAG+GGG - chr3_1:72966329-72966348 Msa0373860:intron 30.0%
GATTAGATAGACAAGAAAAG+TGG - chr3_1:72966367-72966386 Msa0373860:intron 30.0%
!! ATAGCTTTGGAAAAAAAGGA+AGG - chr3_1:72966556-72966575 Msa0373860:intron 30.0%
TACAAAATCCTCCTAATTTG+GGG - chr3_1:72966629-72966648 Msa0373860:CDS 30.0%
GAACTCAAAAATTGTATTGG+AGG - chr3_1:72966652-72966671 Msa0373860:intron 30.0%
TTCAATCTCTGTATATGTGT+GGG + chr3_1:72966928-72966947 None:intergenic 30.0%
TAACAAGAAATGCTTGGTTA+TGG - chr3_1:72966989-72967008 Msa0373860:CDS 30.0%
TCTAGTATGAAAGTCGAAAA+AGG + chr3_1:72967082-72967101 None:intergenic 30.0%
TCATATGAGATAAGGATGTT+AGG - chr3_1:72967171-72967190 Msa0373860:CDS 30.0%
CATAGAATCAAGATGTTGAT+TGG + chr3_1:72967577-72967596 None:intergenic 30.0%
TTGATTCTATGTGATCTACA+GGG - chr3_1:72967586-72967605 Msa0373860:CDS 30.0%
! ATAATATAGGCATGTTGCTT+TGG + chr3_1:72967681-72967700 None:intergenic 30.0%
ATGGAGTCTTCAATAATCAT+TGG + chr3_1:72967739-72967758 None:intergenic 30.0%
ATTGAAGACTCCATATTTAC+TGG - chr3_1:72967745-72967764 Msa0373860:intron 30.0%
ATTTGTAACATCTCGTTGAT+GGG + chr3_1:72967981-72968000 None:intergenic 30.0%
AATTTGTAACATCTCGTTGA+TGG + chr3_1:72967982-72968001 None:intergenic 30.0%
!!! ACCAGTTTTGTTTTTATCGT+TGG - chr3_1:72968062-72968081 Msa0373860:intron 30.0%
ACCAACGATAAAAACAAAAC+TGG + chr3_1:72968066-72968085 None:intergenic 30.0%
!!! AGTTTTGTTTTTATCGTTGG+TGG - chr3_1:72968065-72968084 Msa0373860:intron 30.0%
AAGATTGAAATAAAGACCTC+TGG + chr3_1:72968259-72968278 None:intergenic 30.0%
TATCATTTGATATAGTGCTG+CGG - chr3_1:72968281-72968300 Msa0373860:intron 30.0%
! TGAGTTTGGTTGATATGTTT+AGG - chr3_1:72968345-72968364 Msa0373860:intron 30.0%
AAAATTTCAGTACTTACCAG+TGG + chr3_1:72968418-72968437 None:intergenic 30.0%
!!! TGGTAAGTACTGAAATTTTC+CGG - chr3_1:72968419-72968438 Msa0373860:intron 30.0%
GCAAAATGCATATATTTCCA+AGG + chr3_1:72968446-72968465 None:intergenic 30.0%
ACTAATGAAAGAACACATGT+AGG + chr3_1:72968573-72968592 None:intergenic 30.0%
ATGAAGTTAACAGAAAACAC+AGG + chr3_1:72968678-72968697 None:intergenic 30.0%
AAAATATCAACATAGGACGA+AGG + chr3_1:72968710-72968729 None:intergenic 30.0%
CTCATGTGACTTCTTATATA+GGG + chr3_1:72968779-72968798 None:intergenic 30.0%
TCTCATGTGACTTCTTATAT+AGG + chr3_1:72968780-72968799 None:intergenic 30.0%
TATAAGAAGTCACATGAGAA+AGG - chr3_1:72968781-72968800 Msa0373860:intron 30.0%
CAAACAACATTAATCAAGTG+TGG + chr3_1:72968916-72968935 None:intergenic 30.0%
! GATTAATGTTGTTTGTTTGC+AGG - chr3_1:72968921-72968940 Msa0373860:intron 30.0%
TAAAAGACTCAGCAAAAAAG+AGG - chr3_1:72969397-72969416 Msa0373860:intron 30.0%
! AGAATTCCATCTTCATTTTC+TGG + chr3_1:72969516-72969535 None:intergenic 30.0%
CATGACAAAAAGAGAAAACA+CGG - chr3_1:72969827-72969846 Msa0373860:CDS 30.0%
ATGACAAAAAGAGAAAACAC+GGG - chr3_1:72969828-72969847 Msa0373860:CDS 30.0%
AAAGAAAAAGCTTAACAAGG+AGG - chr3_1:72969895-72969914 Msa0373860:intron 30.0%
ATTCTCCAAATATAACAGTG+TGG - chr3_1:72970131-72970150 Msa0373860:CDS 30.0%
TATTGCCACACTGTTATATT+TGG + chr3_1:72970139-72970158 None:intergenic 30.0%
! TGTGGTTCTGTTTATCAATT+TGG + chr3_1:72970196-72970215 None:intergenic 30.0%
!! TAACATTTTGATCAACTGAC+TGG + chr3_1:72970228-72970247 None:intergenic 30.0%
TTCTTTCTCTTTGCAACTAA+CGG + chr3_1:72970453-72970472 None:intergenic 30.0%
CAAGAACTAAGATAGAGAAA+AGG - chr3_1:72970478-72970497 Msa0373860:CDS 30.0%
CTTAACATAAAATAGAGGTC+CGG + chr3_1:72970629-72970648 None:intergenic 30.0%
! GTTGGCTTAACATAAAATAG+AGG + chr3_1:72970634-72970653 None:intergenic 30.0%
! TTGTTGTTGGAAGAGTTCAA+GGG + chr3_1:72964452-72964471 None:intergenic 35.0%
! ATTGTTGTTGGAAGAGTTCA+AGG + chr3_1:72964453-72964472 None:intergenic 35.0%
ATGAACTTCACTTCCATTTC+CGG - chr3_1:72964478-72964497 Msa0373860:CDS 35.0%
TTTATGGAGCTTCAAACGTT+AGG - chr3_1:72964821-72964840 Msa0373860:intron 35.0%
GTTAGGTGATAAAAAGCTGA+GGG - chr3_1:72964838-72964857 Msa0373860:intron 35.0%
! ACGTATGAACCAAAAGCATA+AGG - chr3_1:72964895-72964914 Msa0373860:intron 35.0%
!! AAAGAATGTTCTGAAGTGCA+CGG + chr3_1:72964934-72964953 None:intergenic 35.0%
! CATTCTTTTTGTCATGTTGC+AGG - chr3_1:72964946-72964965 Msa0373860:intron 35.0%
! TTCTGCGTTGTCTTTGTTAT+AGG - chr3_1:72964980-72964999 Msa0373860:intron 35.0%
AACTTCACAAAAGACGAACA+TGG - chr3_1:72965213-72965232 Msa0373860:intron 35.0%
TGCTTTCATCATCACTATCT+TGG + chr3_1:72965429-72965448 None:intergenic 35.0%
CACCTCAAGTTATTCTTAGA+AGG - chr3_1:72965470-72965489 Msa0373860:CDS 35.0%
! TCCCTTCTAAGAATAACTTG+AGG + chr3_1:72965475-72965494 None:intergenic 35.0%
AGTTATTCTTAGAAGGGAGA+CGG - chr3_1:72965477-72965496 Msa0373860:CDS 35.0%
!! TAAGTTGATATGCACGATAG+TGG - chr3_1:72965628-72965647 Msa0373860:CDS 35.0%
TTTAGAAGTTCAGAAAAGGG+TGG - chr3_1:72965672-72965691 Msa0373860:CDS 35.0%
TTAGAAGTTCAGAAAAGGGT+GGG - chr3_1:72965673-72965692 Msa0373860:CDS 35.0%
TGCAACAAAGATCAGATCTA+CGG - chr3_1:72965905-72965924 Msa0373860:CDS 35.0%
! AAGAAATAATTTGGGGCTGA+GGG - chr3_1:72966260-72966279 Msa0373860:intron 35.0%
!! TTAGGCTTTGTTTGTGAGTT+TGG - chr3_1:72966516-72966535 Msa0373860:intron 35.0%
ACAAAATCCTCCTAATTTGG+GGG - chr3_1:72966630-72966649 Msa0373860:CDS 35.0%
!!! TTTTTGAGTTCCCCCAAATT+AGG + chr3_1:72966643-72966662 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr3_1:72966649-72966668 Msa0373860:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG - chr3_1:72966655-72966674 Msa0373860:intron 35.0%
! ATTGTATTGGAGGAGGATTT+TGG - chr3_1:72966662-72966681 Msa0373860:intron 35.0%
TTAAATTGCGTTCTCTAGTC+CGG - chr3_1:72966899-72966918 Msa0373860:intron 35.0%
GTTCAATCTCTGTATATGTG+TGG + chr3_1:72966929-72966948 None:intergenic 35.0%
TGGCAAATATCACTTATACG+AGG - chr3_1:72967009-72967028 Msa0373860:CDS 35.0%
GAGGAAAAAAAATGTCTGAC+AGG - chr3_1:72967028-72967047 Msa0373860:intron 35.0%
AACTTGAAGCTAAGTTTGGA+GGG + chr3_1:72967131-72967150 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG + chr3_1:72967135-72967154 None:intergenic 35.0%
AACTTGAAGCTAAGTTTGGA+TGG + chr3_1:72967131-72967150 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG + chr3_1:72967135-72967154 None:intergenic 35.0%
CATCCTTATCTCCTATTAAC+GGG + chr3_1:72967246-72967265 None:intergenic 35.0%
GCATCCTTATCTCCTATTAA+CGG + chr3_1:72967247-72967266 None:intergenic 35.0%
TAATAGGAGATAAGGATGCT+AGG - chr3_1:72967248-72967267 Msa0373860:intron 35.0%
AACATGAAAAAGAAAGAGCG+CGG - chr3_1:72967430-72967449 Msa0373860:intron 35.0%
! AAACCTGTGGATCTTTAAGA+TGG + chr3_1:72967498-72967517 None:intergenic 35.0%
CTTGATTCTATGTGATCTAC+AGG - chr3_1:72967585-72967604 Msa0373860:CDS 35.0%
AAAGTGATAGCTCGAACAAT+TGG - chr3_1:72967815-72967834 Msa0373860:intron 35.0%
AAGTGATAGCTCGAACAATT+GGG - chr3_1:72967816-72967835 Msa0373860:intron 35.0%
TTTGTAACATCTCGTTGATG+GGG + chr3_1:72967980-72967999 None:intergenic 35.0%
TACAAATTTGATTGCAGCAG+CGG - chr3_1:72967994-72968013 Msa0373860:intron 35.0%
CAATATGCAGTACCATATCA+TGG + chr3_1:72968030-72968049 None:intergenic 35.0%
!!! AAGGTGATATTTTTGGATGC+AGG - chr3_1:72968165-72968184 Msa0373860:intron 35.0%
! TGCGGACTTTTTATTATGAC+AGG - chr3_1:72968299-72968318 Msa0373860:intron 35.0%
TATGTTTAGGCTATCACTGT+TGG - chr3_1:72968358-72968377 Msa0373860:intron 35.0%
TGTTGGAATAAATGCAGTCA+GGG - chr3_1:72968375-72968394 Msa0373860:intron 35.0%
ATGCATATATTTCCAAGGAC+CGG + chr3_1:72968441-72968460 None:intergenic 35.0%
TAGTTAAAACCAACCCTTGT+TGG + chr3_1:72968503-72968522 None:intergenic 35.0%
!!! AAGGGTTGGTTTTAACTAGT+AGG - chr3_1:72968505-72968524 Msa0373860:intron 35.0%
! CATACTGAACAAAGTACTCA+TGG + chr3_1:72968603-72968622 None:intergenic 35.0%
TCTCATTACATTATTCCGAG+AGG - chr3_1:72968825-72968844 Msa0373860:intron 35.0%
! ATTACCGTAACTCTTTTGTG+TGG - chr3_1:72968850-72968869 Msa0373860:intron 35.0%
! TTACCGTAACTCTTTTGTGT+GGG - chr3_1:72968851-72968870 Msa0373860:intron 35.0%
CCTTCTTAATTAGCAGTGAA+GGG + chr3_1:72968951-72968970 None:intergenic 35.0%
TCCTTCTTAATTAGCAGTGA+AGG + chr3_1:72968952-72968971 None:intergenic 35.0%
TTATGGAGAAGTCAATGTTG+CGG - chr3_1:72969011-72969030 Msa0373860:intron 35.0%
!! TATTGATGATGATGTTGAGC+AGG - chr3_1:72969065-72969084 Msa0373860:intron 35.0%
AGTTCTCATTCTGATGATTG+CGG - chr3_1:72969090-72969109 Msa0373860:intron 35.0%
TGATTCACCATCATGATCTT+CGG + chr3_1:72969211-72969230 None:intergenic 35.0%
! CGTGTTTTCTCTTTTTGTCA+TGG + chr3_1:72969829-72969848 None:intergenic 35.0%
TTTCTTTACATGAGCCTAGA+AGG + chr3_1:72969882-72969901 None:intergenic 35.0%
!! TTTGGAGAATCATTGGTTTG+TGG + chr3_1:72970121-72970140 None:intergenic 35.0%
!!! ACTGACTGGTTTTAATAGTG+TGG + chr3_1:72970214-72970233 None:intergenic 35.0%
GATTGCACTCTAATCCAATA+TGG - chr3_1:72970353-72970372 Msa0373860:CDS 35.0%
TGGTCTAAGTAACAAGCAAA+AGG - chr3_1:72970410-72970429 Msa0373860:CDS 35.0%
GTTAGTTGCAAAGAGAAAGA+AGG - chr3_1:72970452-72970471 Msa0373860:CDS 35.0%
AGAAAAGGATAAAACAGCAG+CGG - chr3_1:72970493-72970512 Msa0373860:CDS 35.0%
ATAGAGGTCCGGAAAAAAAA+TGG + chr3_1:72970618-72970637 None:intergenic 35.0%
! TTTTCGGATTTTAGACCGGA+GGG + chr3_1:72964337-72964356 None:intergenic 40.0%
! GAGCTTTTCGGATTTTAGAC+CGG + chr3_1:72964341-72964360 None:intergenic 40.0%
! TCTTTGATTGTAGTGATGGG+AGG + chr3_1:72964366-72964385 None:intergenic 40.0%
! TGAATTGACTGCGGATTAAG+AGG + chr3_1:72964423-72964442 None:intergenic 40.0%
AATGGAAGTGAAGTTCATGG+CGG + chr3_1:72964476-72964495 None:intergenic 40.0%
GGAAATGGAAGTGAAGTTCA+TGG + chr3_1:72964479-72964498 None:intergenic 40.0%
!! AGAGAGGAACATGGCTTTAT+CGG + chr3_1:72964539-72964558 None:intergenic 40.0%
! GTTTGTTAGGGAATTCAGAG+AGG + chr3_1:72964588-72964607 None:intergenic 40.0%
AAATCGTTACGAAGTCCAGA+AGG + chr3_1:72964646-72964665 None:intergenic 40.0%
CGTTAGGTGATAAAAAGCTG+AGG - chr3_1:72964837-72964856 Msa0373860:intron 40.0%
! TGGCTTCATCCTTATGCTTT+TGG + chr3_1:72964907-72964926 None:intergenic 40.0%
! TGCGTTGTCTTTGTTATAGG+AGG - chr3_1:72964983-72965002 Msa0373860:intron 40.0%
AATAGCAAGAGGATGAAGAC+CGG - chr3_1:72965162-72965181 Msa0373860:intron 40.0%
TAGAAGGGAGACGGTTTATA+AGG - chr3_1:72965486-72965505 Msa0373860:CDS 40.0%
TAGAAGTTCAGAAAAGGGTG+GGG - chr3_1:72965674-72965693 Msa0373860:CDS 40.0%
!! TGGGTGAAATTTTGATGCAG+CGG - chr3_1:72965698-72965717 Msa0373860:CDS 40.0%
!! GAAATTTTGATGCAGCGGAA+AGG - chr3_1:72965703-72965722 Msa0373860:CDS 40.0%
!!! GAGTCGAGCCCTTATTTTTT+TGG - chr3_1:72965804-72965823 Msa0373860:CDS 40.0%
TTGAGCATGCTTTAACACCT+TGG - chr3_1:72966078-72966097 Msa0373860:intron 40.0%
GCTTCTATGAATGCTAACTC+AGG + chr3_1:72966216-72966235 None:intergenic 40.0%
! GAAGAAATAATTTGGGGCTG+AGG - chr3_1:72966259-72966278 Msa0373860:intron 40.0%
!! AGAAAAGTGGACTGTTCTTG+AGG - chr3_1:72966380-72966399 Msa0373860:intron 40.0%
!! GAAAAGTGGACTGTTCTTGA+GGG - chr3_1:72966381-72966400 Msa0373860:intron 40.0%
!! AAAAGTGGACTGTTCTTGAG+GGG - chr3_1:72966382-72966401 Msa0373860:intron 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG - chr3_1:72966520-72966539 Msa0373860:intron 40.0%
!! GGGGATAGCTTTGGAAAAAA+AGG - chr3_1:72966552-72966571 Msa0373860:intron 40.0%
GAAAAAAAGGAAGGAGCAGA+TGG - chr3_1:72966565-72966584 Msa0373860:intron 40.0%
! TATTGGAGGAGGATTTTGGA+GGG - chr3_1:72966666-72966685 Msa0373860:intron 40.0%
GTGGGAAATATAGGGGAAAT+TGG + chr3_1:72966812-72966831 None:intergenic 40.0%
TTTGGGAGGTGGGAAATATA+GGG + chr3_1:72966820-72966839 None:intergenic 40.0%
GAGATTGAACTCAATAGTGC+AGG - chr3_1:72966939-72966958 Msa0373860:intron 40.0%
GGAAGAGAATTCAGCTCAAA+TGG - chr3_1:72967049-72967068 Msa0373860:intron 40.0%
GAACTTGAAGCTAAGTTTGG+AGG + chr3_1:72967132-72967151 None:intergenic 40.0%
GCACTCGTTCATATGAGATA+AGG - chr3_1:72967163-72967182 Msa0373860:CDS 40.0%
TGAAGCTAAGTTTGGATGGA+GGG + chr3_1:72967204-72967223 None:intergenic 40.0%
TTGAAGCTAAGTTTGGATGG+AGG + chr3_1:72967205-72967224 None:intergenic 40.0%
! TTAACGGGTGCAAGTACAAA+AGG + chr3_1:72967231-72967250 None:intergenic 40.0%
TTGTACTTGCACCCGTTAAT+AGG - chr3_1:72967232-72967251 Msa0373860:intron 40.0%
! AAATTTTAGGCAAGCCACCA+AGG - chr3_1:72967355-72967374 Msa0373860:intron 40.0%
! TTTTGCTAGCTGATGTACCT+TGG + chr3_1:72967375-72967394 None:intergenic 40.0%
!! GGATCTTTAAGATGGTTGAG+TGG + chr3_1:72967490-72967509 None:intergenic 40.0%
CAACCATCTTAAAGATCCAC+AGG - chr3_1:72967492-72967511 Msa0373860:intron 40.0%
GGATAGAGCAAAATGCAAAC+AGG + chr3_1:72967556-72967575 None:intergenic 40.0%
! ATGTGATCTACAGGGTTTTG+TGG - chr3_1:72967594-72967613 Msa0373860:CDS 40.0%
GAAATGCAATGAGCGATTTG+AGG - chr3_1:72967639-72967658 Msa0373860:intron 40.0%
!! CAGGAGTACTCAACTTTGAT+TGG - chr3_1:72968318-72968337 Msa0373860:intron 40.0%
! CTTTGATTGGCTGATGAGTT+TGG - chr3_1:72968331-72968350 Msa0373860:intron 40.0%
CTGTTGGAATAAATGCAGTC+AGG - chr3_1:72968374-72968393 Msa0373860:intron 40.0%
! TACTGAAATTTTCCGGTCCT+TGG - chr3_1:72968426-72968445 Msa0373860:intron 40.0%
TATATCTTGCGCATCCAACA+AGG - chr3_1:72968486-72968505 Msa0373860:intron 40.0%
ATATCTTGCGCATCCAACAA+GGG - chr3_1:72968487-72968506 Msa0373860:intron 40.0%
ACTAAGCTGACTAAAAGTCC+TGG - chr3_1:72968533-72968552 Msa0373860:intron 40.0%
TAGGAATCAAACTCAAGACC+AGG + chr3_1:72968554-72968573 None:intergenic 40.0%
TATCAACATAGGACGAAGGA+AGG + chr3_1:72968706-72968725 None:intergenic 40.0%
GTGACTTCTTATATAGGGCA+AGG + chr3_1:72968774-72968793 None:intergenic 40.0%
GAGTTACGGTAATTACCTCT+CGG + chr3_1:72968843-72968862 None:intergenic 40.0%
! TACCGTAACTCTTTTGTGTG+GGG - chr3_1:72968852-72968871 Msa0373860:intron 40.0%
CCCTTCACTGCTAATTAAGA+AGG - chr3_1:72968948-72968967 Msa0373860:intron 40.0%
TGCTAATTAAGAAGGACCGA+GGG - chr3_1:72968956-72968975 Msa0373860:intron 40.0%
TTGACTTCTCCATAAGCCTT+TGG + chr3_1:72969006-72969025 None:intergenic 40.0%
AAATGAGCAGGAAGATGATC+AGG - chr3_1:72969119-72969138 Msa0373860:intron 40.0%
! AGTTCTGATTACGAAACCAG+TGG - chr3_1:72969249-72969268 Msa0373860:intron 40.0%
ATTATCAGCATCATCACCAC+TGG + chr3_1:72969268-72969287 None:intergenic 40.0%
TGATCTAGAAGACAGTGAAG+AGG - chr3_1:72969290-72969309 Msa0373860:intron 40.0%
ATTTCGGAACATGAAGGAGA+TGG - chr3_1:72969333-72969352 Msa0373860:intron 40.0%
GATGGTGATCTGCATATTCT+TGG - chr3_1:72969351-72969370 Msa0373860:intron 40.0%
TCTGCATATTCTTGGAAGTG+TGG - chr3_1:72969359-72969378 Msa0373860:intron 40.0%
!! TCCATCTTCATTTTCTGGCA+GGG + chr3_1:72969511-72969530 None:intergenic 40.0%
!! TTCCATCTTCATTTTCTGGC+AGG + chr3_1:72969512-72969531 None:intergenic 40.0%
! TGCAGTTCTTGCTTCGTTTT+TGG + chr3_1:72969660-72969679 None:intergenic 40.0%
! ATTCCAAGCTCTGATCAACT+AGG - chr3_1:72969719-72969738 Msa0373860:intron 40.0%
AAACCTAGTTGATCAGAGCT+TGG + chr3_1:72969725-72969744 None:intergenic 40.0%
! TCAACTAGGTTTAAAGCGAG+TGG - chr3_1:72969733-72969752 Msa0373860:CDS 40.0%
AGAGCTACTTACTTCAAGCA+TGG + chr3_1:72969765-72969784 None:intergenic 40.0%
TACTTATGTGTGCACCTTCT+AGG - chr3_1:72969865-72969884 Msa0373860:intron 40.0%
AAAAGCTTAACAAGGAGGAG+AGG - chr3_1:72969900-72969919 Msa0373860:intron 40.0%
! TTTTGTATTGAACAGACGGG+TGG - chr3_1:72970390-72970409 Msa0373860:CDS 40.0%
AGTTGCAAAGAGAAAGAAGG+TGG - chr3_1:72970455-72970474 Msa0373860:CDS 40.0%
GATTTGATTCTGCATTCCAG+AGG - chr3_1:72970738-72970757 Msa0373860:five_prime_UTR 40.0%
! TTTCGGATTTTAGACCGGAG+GGG + chr3_1:72964336-72964355 None:intergenic 45.0%
! CTTTTCGGATTTTAGACCGG+AGG + chr3_1:72964338-72964357 None:intergenic 45.0%
AAGATGAAATGCGACCCTGA+AGG - chr3_1:72964382-72964401 Msa0373860:three_prime_UTR 45.0%
! ACTGCGGATTAAGAGGAGTT+CGG + chr3_1:72964416-72964435 None:intergenic 45.0%
GGGAGGAATTGAATTGACTG+CGG + chr3_1:72964432-72964451 None:intergenic 45.0%
TTGTTGGAAGAGTTCAAGGG+AGG + chr3_1:72964449-72964468 None:intergenic 45.0%
!! AGTTCATGGCGGATTGTTGT+TGG + chr3_1:72964465-72964484 None:intergenic 45.0%
!! AGAGAGGTGTTGAGGGTAAA+AGG + chr3_1:72964572-72964591 None:intergenic 45.0%
!! GGAATTCAGAGAGGTGTTGA+GGG + chr3_1:72964579-72964598 None:intergenic 45.0%
!! GCAACTCAGCGAGTTTGTTA+GGG + chr3_1:72964600-72964619 None:intergenic 45.0%
! AGCAACTCAGCGAGTTTGTT+AGG + chr3_1:72964601-72964620 None:intergenic 45.0%
!!! GTTCTGAAGTGCACGGTTTT+TGG + chr3_1:72964927-72964946 None:intergenic 45.0%
ATAGCAAGAGGATGAAGACC+GGG - chr3_1:72965163-72965182 Msa0373860:intron 45.0%
AAACGAACCTTGACGATGGA+TGG + chr3_1:72965280-72965299 None:intergenic 45.0%
GAACAAACGAACCTTGACGA+TGG + chr3_1:72965284-72965303 None:intergenic 45.0%
CAAGGTTCGTTTGTTCGCTT+TGG - chr3_1:72965288-72965307 Msa0373860:CDS 45.0%
! TGATGATGAAAGCAGTGACG+AGG - chr3_1:72965435-72965454 Msa0373860:intron 45.0%
GAGACGGTTTATAAGGTGAG+AGG - chr3_1:72965493-72965512 Msa0373860:CDS 45.0%
TTCTTGAGGGGATTGACAGA+GGG - chr3_1:72966394-72966413 Msa0373860:intron 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG - chr3_1:72966519-72966538 Msa0373860:intron 45.0%
GTTTGTGAGTTTGGAGGGAA+AGG - chr3_1:72966525-72966544 Msa0373860:intron 45.0%
GAGCAGATGGAAGAAGTTGA+GGG - chr3_1:72966578-72966597 Msa0373860:intron 45.0%
! TGGAAGAAGTTGAGGGCTTT+TGG - chr3_1:72966585-72966604 Msa0373860:intron 45.0%
! GGAAGAAGTTGAGGGCTTTT+GGG - chr3_1:72966586-72966605 Msa0373860:intron 45.0%
! GAAGAAGTTGAGGGCTTTTG+GGG - chr3_1:72966587-72966606 Msa0373860:intron 45.0%
! AAGAAGTTGAGGGCTTTTGG+GGG - chr3_1:72966588-72966607 Msa0373860:intron 45.0%
TTGAGTTCCCCCAAATTAGG+AGG + chr3_1:72966640-72966659 None:intergenic 45.0%
! GTATTGGAGGAGGATTTTGG+AGG - chr3_1:72966665-72966684 Msa0373860:intron 45.0%
TTGGGAGGTGGGAAATATAG+GGG + chr3_1:72966819-72966838 None:intergenic 45.0%
! CTTTGGGAGGTGGGAAATAT+AGG + chr3_1:72966821-72966840 None:intergenic 45.0%
TTTGGGAGTTCGAACAGAAG+GGG + chr3_1:72966848-72966867 None:intergenic 45.0%
GTTTGGGAGTTCGAACAGAA+GGG + chr3_1:72966849-72966868 None:intergenic 45.0%
TGTTTGGGAGTTCGAACAGA+AGG + chr3_1:72966850-72966869 None:intergenic 45.0%
GAACTCCCAAACAAAGCCTT+GGG - chr3_1:72966857-72966876 Msa0373860:intron 45.0%
AACTCCCAAACAAAGCCTTG+GGG - chr3_1:72966858-72966877 Msa0373860:intron 45.0%
!! TAGACCCCAAGGCTTTGTTT+GGG + chr3_1:72966865-72966884 None:intergenic 45.0%
!! ATAGACCCCAAGGCTTTGTT+TGG + chr3_1:72966866-72966885 None:intergenic 45.0%
AAAGCCTTGGGGTCTATCTT+TGG - chr3_1:72966869-72966888 Msa0373860:intron 45.0%
AAGCCTTGGGGTCTATCTTT+GGG - chr3_1:72966870-72966889 Msa0373860:intron 45.0%
AAACCCAAAGATAGACCCCA+AGG + chr3_1:72966876-72966895 None:intergenic 45.0%
! TCTGTATATGTGTGGGCTAC+CGG + chr3_1:72966921-72966940 None:intergenic 45.0%
TGAAGCTAAGTTTGGAGGGA+GGG + chr3_1:72967127-72967146 None:intergenic 45.0%
TTGAAGCTAAGTTTGGAGGG+AGG + chr3_1:72967128-72967147 None:intergenic 45.0%
TGAACGAGTGCAAGTGCAAA+AGG + chr3_1:72967154-72967173 None:intergenic 45.0%
GCACCCGTTAATAGGAGATA+AGG - chr3_1:72967240-72967259 Msa0373860:intron 45.0%
TGTTCAGTATGCTTGTAGCG+TGG - chr3_1:72968612-72968631 Msa0373860:intron 45.0%
AAGGGAGTTATCCCATTCCA+AGG + chr3_1:72968639-72968658 None:intergenic 45.0%
ATAGGGCAAGGTCTTGAAGT+AGG + chr3_1:72968762-72968781 None:intergenic 45.0%
! ACCGTAACTCTTTTGTGTGG+GGG - chr3_1:72968853-72968872 Msa0373860:intron 45.0%
CTGCTAATTAAGAAGGACCG+AGG - chr3_1:72968955-72968974 Msa0373860:intron 45.0%
TAATTAAGAAGGACCGAGGG+AGG - chr3_1:72968959-72968978 Msa0373860:intron 45.0%
!! TAAGCCTTTGGTCTTGCCTT+GGG + chr3_1:72968994-72969013 None:intergenic 45.0%
!! ATAAGCCTTTGGTCTTGCCT+TGG + chr3_1:72968995-72969014 None:intergenic 45.0%
AAGGCAAGACCAAAGGCTTA+TGG - chr3_1:72968994-72969013 Msa0373860:intron 45.0%
TTGCGGTTCAGAAAATGAGC+AGG - chr3_1:72969107-72969126 Msa0373860:intron 45.0%
CAGCTAGGCAGTGATAATAC+CGG - chr3_1:72969168-72969187 Msa0373860:intron 45.0%
GGCTTCATCATCATCACTTC+CGG + chr3_1:72969190-72969209 None:intergenic 45.0%
GATGAAGCCGAAGATCATGA+TGG - chr3_1:72969201-72969220 Msa0373860:intron 45.0%
!! TGAAGAGGATGGTGGGATTT+CGG - chr3_1:72969317-72969336 Msa0373860:intron 45.0%
TTTCCAATGCAGACTTCCAG+AGG - chr3_1:72969535-72969554 Msa0373860:CDS 45.0%
! CCTTTAGTTCCTTGATCCTC+TGG + chr3_1:72969554-72969573 None:intergenic 45.0%
CCAGAGGATCAAGGAACTAA+AGG - chr3_1:72969551-72969570 Msa0373860:CDS 45.0%
! CTAGGTTTAAAGCGAGTGGA+TGG - chr3_1:72969737-72969756 Msa0373860:CDS 45.0%
AGCGGCTGTCAAACAGAAAA+AGG - chr3_1:72969973-72969992 Msa0373860:intron 45.0%
GGTCTGGTAAACAACAACGT+GGG - chr3_1:72970514-72970533 Msa0373860:CDS 45.0%
! AGCTTCTCGTTGATTGCAGT+TGG + chr3_1:72970652-72970671 None:intergenic 45.0%
!!! TTTTTTATATTAAATTTTGA+TGG - chr3_1:72970686-72970705 Msa0373860:CDS 5.0%
! TGATGGGAGGCTGAGCTTTT+CGG + chr3_1:72964353-72964372 None:intergenic 50.0%
GTTCGGATTCGTAGCCTTCA+GGG + chr3_1:72964399-72964418 None:intergenic 50.0%
AGTTCGGATTCGTAGCCTTC+AGG + chr3_1:72964400-72964419 None:intergenic 50.0%
! GGCTTTATCGGCGAGATCTT+TGG + chr3_1:72964527-72964546 None:intergenic 50.0%
AAAAGGAGGTGAGGTGAGAG+AGG + chr3_1:72964555-72964574 None:intergenic 50.0%
GTTGAGGGTAAAAGGAGGTG+AGG + chr3_1:72964564-72964583 None:intergenic 50.0%
!! GAGGTGTTGAGGGTAAAAGG+AGG + chr3_1:72964569-72964588 None:intergenic 50.0%
!! GGGAATTCAGAGAGGTGTTG+AGG + chr3_1:72964580-72964599 None:intergenic 50.0%
CTTCCTTCCATCCATCGTCA+AGG - chr3_1:72965270-72965289 Msa0373860:CDS 50.0%
GAACCTTGACGATGGATGGA+AGG + chr3_1:72965276-72965295 None:intergenic 50.0%
AGTTCAGAAAAGGGTGGGGT+TGG - chr3_1:72965678-72965697 Msa0373860:CDS 50.0%
GTTCAGAAAAGGGTGGGGTT+GGG - chr3_1:72965679-72965698 Msa0373860:CDS 50.0%
GTTCTTGAGGGGATTGACAG+AGG - chr3_1:72966393-72966412 Msa0373860:intron 50.0%
AGTTTGGAGGGAAAGGCAGA+GGG - chr3_1:72966532-72966551 Msa0373860:intron 50.0%
AAAGGCAGAGGGGATAGCTT+TGG - chr3_1:72966543-72966562 Msa0373860:intron 50.0%
GGAGCAGATGGAAGAAGTTG+AGG - chr3_1:72966577-72966596 Msa0373860:intron 50.0%
CGAACTCCCAAACAAAGCCT+TGG - chr3_1:72966856-72966875 Msa0373860:intron 50.0%
TGCTAGCTGATGTACCTTGG+TGG + chr3_1:72967372-72967391 None:intergenic 50.0%
! AAGAGCGCGGATCATCTGAA+AGG - chr3_1:72967443-72967462 Msa0373860:intron 50.0%
! TAACATCTCGTTGATGGGGC+TGG + chr3_1:72967976-72967995 None:intergenic 50.0%
TTTGATTGCAGCAGCGGTTC+AGG - chr3_1:72968000-72968019 Msa0373860:intron 50.0%
GGTTCAGGCTTGCCATGATA+TGG - chr3_1:72968015-72968034 Msa0373860:intron 50.0%
AACAAGGGCTCAACTGCATC+AGG + chr3_1:72968196-72968215 None:intergenic 50.0%
TAAAGACCTCTGGACGTGAG+CGG + chr3_1:72968249-72968268 None:intergenic 50.0%
TACTTACCAGTGGCATACGC+AGG + chr3_1:72968408-72968427 None:intergenic 50.0%
TATGCTTGTAGCGTGGTCCT+TGG - chr3_1:72968619-72968638 Msa0373860:intron 50.0%
TTGTAGCGTGGTCCTTGGAA+TGG - chr3_1:72968624-72968643 Msa0373860:intron 50.0%
TGTAGCGTGGTCCTTGGAAT+GGG - chr3_1:72968625-72968644 Msa0373860:intron 50.0%
CCCCCCACACAAAAGAGTTA+CGG + chr3_1:72968857-72968876 None:intergenic 50.0%
! CCGTAACTCTTTTGTGTGGG+GGG - chr3_1:72968854-72968873 Msa0373860:intron 50.0%
!! AAGCCTTTGGTCTTGCCTTG+GGG + chr3_1:72968993-72969012 None:intergenic 50.0%
ATCTGCAACAACTCAGCACC+AGG + chr3_1:72969045-72969064 None:intergenic 50.0%
TCTGACGATGACAACCAGCT+AGG - chr3_1:72969153-72969172 Msa0373860:intron 50.0%
CGGTATTATCACTGCCTAGC+TGG + chr3_1:72969170-72969189 None:intergenic 50.0%
CAGTGAAGAGGCTGATGAAG+AGG - chr3_1:72969302-72969321 Msa0373860:intron 50.0%
GAAGAGGCTGATGAAGAGGA+TGG - chr3_1:72969306-72969325 Msa0373860:intron 50.0%
AGGCTGATGAAGAGGATGGT+GGG - chr3_1:72969310-72969329 Msa0373860:intron 50.0%
GGTGGGATTTCGGAACATGA+AGG - chr3_1:72969327-72969346 Msa0373860:intron 50.0%
!! CAGCTGCTGATTCAAGTCTC+CGG - chr3_1:72969448-72969467 Msa0373860:intron 50.0%
!! AGCTGCTGATTCAAGTCTCC+GGG - chr3_1:72969449-72969468 Msa0373860:intron 50.0%
!! TCTCCGGGCTTTGAAGAAGT+TGG - chr3_1:72969464-72969483 Msa0373860:intron 50.0%
CTGCCAACTTCTTCAAAGCC+CGG + chr3_1:72969470-72969489 None:intergenic 50.0%
!! GGGCTTTGAAGAAGTTGGCA+GGG - chr3_1:72969469-72969488 Msa0373860:intron 50.0%
GAAGTTGGCAGGGACAACAA+TGG - chr3_1:72969479-72969498 Msa0373860:intron 50.0%
GCCCTGCCAGAAAATGAAGA+TGG - chr3_1:72969507-72969526 Msa0373860:intron 50.0%
! GATCCTCTGGAAGTCTGCAT+TGG + chr3_1:72969541-72969560 None:intergenic 50.0%
TGCAGACTTCCAGAGGATCA+AGG - chr3_1:72969542-72969561 Msa0373860:CDS 50.0%
AGAACTGCATTAGCGCAGCA+CGG - chr3_1:72969671-72969690 Msa0373860:intron 50.0%
GCTTAACAAGGAGGAGAGGT+TGG - chr3_1:72969904-72969923 Msa0373860:intron 50.0%
AGGTTGGCAATGGTTAGAGC+AGG - chr3_1:72969920-72969939 Msa0373860:intron 50.0%
GGTTGGCAATGGTTAGAGCA+GGG - chr3_1:72969921-72969940 Msa0373860:intron 50.0%
AGGATAAAACAGCAGCGGTC+TGG - chr3_1:72970498-72970517 Msa0373860:CDS 50.0%
CGGTCTGGTAAACAACAACG+TGG - chr3_1:72970513-72970532 Msa0373860:CDS 50.0%
CTGGTAAACAACAACGTGGG+AGG - chr3_1:72970517-72970536 Msa0373860:CDS 50.0%
! TGGGAGGAAAGCGTGGAAAT+AGG - chr3_1:72970533-72970552 Msa0373860:CDS 50.0%
! GGGAGGAAAGCGTGGAAATA+GGG - chr3_1:72970534-72970553 Msa0373860:CDS 50.0%
!! GTGGTGGTGGCTACGTTTCA+TGG + chr3_1:72964284-72964303 None:intergenic 55.0%
GTCGTTGGAGATGCCGGAAA+TGG + chr3_1:72964494-72964513 None:intergenic 55.0%
CGAGATCTTTGGCGACAGTG+GGG + chr3_1:72964516-72964535 None:intergenic 55.0%
GCGAGATCTTTGGCGACAGT+GGG + chr3_1:72964517-72964536 None:intergenic 55.0%
GGTGAGGTGAGAGAGGAACA+TGG + chr3_1:72964548-72964567 None:intergenic 55.0%
GCTGCTCGAACACTTCCTTC+TGG - chr3_1:72964628-72964647 Msa0373860:intron 55.0%
TAGTGTCACAAGCGCCCTCT+TGG + chr3_1:72965189-72965208 None:intergenic 55.0%
! GCTGAGGGCATGTTAGTTGG+AGG - chr3_1:72966275-72966294 Msa0373860:intron 55.0%
GAGTTTGGAGGGAAAGGCAG+AGG - chr3_1:72966531-72966550 Msa0373860:intron 55.0%
GTTTGGAGGGAAAGGCAGAG+GGG - chr3_1:72966533-72966552 Msa0373860:intron 55.0%
GAACAGAAGGGGAGGGCTTT+GGG + chr3_1:72966837-72966856 None:intergenic 55.0%
GGAGTTCGAACAGAAGGGGA+GGG + chr3_1:72966844-72966863 None:intergenic 55.0%
AAGGGCTCAACTGCATCAGG+AGG + chr3_1:72968193-72968212 None:intergenic 55.0%
GATATGCCTGCGTATGCCAC+TGG - chr3_1:72968399-72968418 Msa0373860:intron 55.0%
CTTGCGCATCCAACAAGGGT+TGG - chr3_1:72968491-72968510 Msa0373860:intron 55.0%
TGACCCCAAGGCAAGACCAA+AGG - chr3_1:72968987-72969006 Msa0373860:intron 55.0%
AATGTTGCGGCTGACGTTCC+TGG - chr3_1:72969024-72969043 Msa0373860:intron 55.0%
GAGGCTGATGAAGAGGATGG+TGG - chr3_1:72969309-72969328 Msa0373860:intron 55.0%
!! CGGGCTTTGAAGAAGTTGGC+AGG - chr3_1:72969468-72969487 Msa0373860:intron 55.0%
GAACTGCATTAGCGCAGCAC+GGG - chr3_1:72969672-72969691 Msa0373860:intron 55.0%
CAAGGAGGAGAGGTTGGCAA+TGG - chr3_1:72969910-72969929 Msa0373860:intron 55.0%
TGGCAATGGTTAGAGCAGGG+AGG - chr3_1:72969924-72969943 Msa0373860:intron 55.0%
GGCAATGGTTAGAGCAGGGA+GGG - chr3_1:72969925-72969944 Msa0373860:intron 55.0%
AATGGTTAGAGCAGGGAGGG+AGG - chr3_1:72969928-72969947 Msa0373860:intron 55.0%
AGGACAGTACCATGCTCGAG+CGG - chr3_1:72969955-72969974 Msa0373860:intron 55.0%
AACAACGTGGGAGGAAAGCG+TGG - chr3_1:72970526-72970545 Msa0373860:CDS 55.0%
!! ACGGAGGCATTTCTCCCCTC+CGG - chr3_1:72964319-72964338 Msa0373860:three_prime_UTR 60.0%
AGTGGGGTCGTTGGAGATGC+CGG + chr3_1:72964500-72964519 None:intergenic 60.0%
TTTGGCGACAGTGGGGTCGT+TGG + chr3_1:72964509-72964528 None:intergenic 60.0%
GGCGAGATCTTTGGCGACAG+TGG + chr3_1:72964518-72964537 None:intergenic 60.0%
AGGATGAAGACCGGGCCAAG+AGG - chr3_1:72965171-72965190 Msa0373860:intron 60.0%
GGATGAAGACCGGGCCAAGA+GGG - chr3_1:72965172-72965191 Msa0373860:intron 60.0%
! GGGGCTGAGGGCATGTTAGT+TGG - chr3_1:72966272-72966291 Msa0373860:intron 60.0%
CGAACAGAAGGGGAGGGCTT+TGG + chr3_1:72966838-72966857 None:intergenic 60.0%
GGGAGTTCGAACAGAAGGGG+AGG + chr3_1:72966845-72966864 None:intergenic 60.0%
TGGAGGGAGGGAGTAGAGCA+GGG + chr3_1:72967115-72967134 None:intergenic 60.0%
TTGGAGGGAGGGAGTAGAGC+AGG + chr3_1:72967116-72967135 None:intergenic 60.0%
ACATGACCGCTCACGTCCAG+AGG - chr3_1:72968240-72968259 Msa0373860:intron 60.0%
GGTCTTGCCTTGGGGTCAGT+AGG + chr3_1:72968985-72969004 None:intergenic 60.0%
AGAGCAGGGAGGGAGGAAAG+AGG - chr3_1:72969935-72969954 Msa0373860:intron 60.0%
GTTTGACAGCCGCTCGAGCA+TGG + chr3_1:72969967-72969986 None:intergenic 60.0%
GAAATGCCTCCGTCGCGGCA+TGG + chr3_1:72964312-72964331 None:intergenic 65.0%
GGGGAGAAATGCCTCCGTCG+CGG + chr3_1:72964317-72964336 None:intergenic 65.0%
TCACAAGCGCCCTCTTGGCC+CGG + chr3_1:72965184-72965203 None:intergenic 65.0%
!! AGGGGAGGGCTTTGGGAGGT+GGG + chr3_1:72966830-72966849 None:intergenic 65.0%
!! AAGGGGAGGGCTTTGGGAGG+TGG + chr3_1:72966831-72966850 None:intergenic 65.0%
!! CAGAAGGGGAGGGCTTTGGG+AGG + chr3_1:72966834-72966853 None:intergenic 65.0%
TGGGGTCAGTAGGCCTCCCT+CGG + chr3_1:72968975-72968994 None:intergenic 65.0%
AGGGAGGCCTACTGACCCCA+AGG - chr3_1:72968975-72968994 Msa0373860:intron 65.0%
!! CGGCATGGCTCTGGTGGTGG+TGG + chr3_1:72964297-72964316 None:intergenic 70.0%
!! TCGCGGCATGGCTCTGGTGG+TGG + chr3_1:72964300-72964319 None:intergenic 70.0%
CCACCAGAGCCATGCCGCGA+CGG - chr3_1:72964300-72964319 Msa0373860:three_prime_UTR 70.0%
!! CCGTCGCGGCATGGCTCTGG+TGG + chr3_1:72964303-72964322 None:intergenic 75.0%
CCTCCGTCGCGGCATGGCTC+TGG + chr3_1:72964306-72964325 None:intergenic 75.0%
CCAGAGCCATGCCGCGACGG+AGG - chr3_1:72964303-72964322 Msa0373860:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 72964227 72970793 72964227 ID=Msa0373860;Name=Msa0373860
chr3_1 mRNA 72964227 72970793 72964227 ID=Msa0373860-mRNA-1;Parent=Msa0373860;Name=Msa0373860-mRNA-1;_AED=0.12;_eAED=0.12;_QI=56|1|1|1|1|1|15|239|816
chr3_1 exon 72964227 72964615 72964227 ID=Msa0373860-mRNA-1:exon:16521;Parent=Msa0373860-mRNA-1
chr3_1 exon 72965026 72965133 72965026 ID=Msa0373860-mRNA-1:exon:16520;Parent=Msa0373860-mRNA-1
chr3_1 exon 72965248 72965364 72965248 ID=Msa0373860-mRNA-1:exon:16519;Parent=Msa0373860-mRNA-1
chr3_1 exon 72965448 72966077 72965448 ID=Msa0373860-mRNA-1:exon:16518;Parent=Msa0373860-mRNA-1
chr3_1 exon 72966174 72966275 72966174 ID=Msa0373860-mRNA-1:exon:16517;Parent=Msa0373860-mRNA-1
chr3_1 exon 72966600 72966653 72966600 ID=Msa0373860-mRNA-1:exon:16516;Parent=Msa0373860-mRNA-1
chr3_1 exon 72966759 72966833 72966759 ID=Msa0373860-mRNA-1:exon:16515;Parent=Msa0373860-mRNA-1
chr3_1 exon 72966984 72967043 72966984 ID=Msa0373860-mRNA-1:exon:16514;Parent=Msa0373860-mRNA-1
chr3_1 exon 72967128 72967223 72967128 ID=Msa0373860-mRNA-1:exon:16513;Parent=Msa0373860-mRNA-1
chr3_1 exon 72967360 72967413 72967360 ID=Msa0373860-mRNA-1:exon:16512;Parent=Msa0373860-mRNA-1
chr3_1 exon 72967507 72967656 72967507 ID=Msa0373860-mRNA-1:exon:16511;Parent=Msa0373860-mRNA-1
chr3_1 exon 72969513 72969648 72969513 ID=Msa0373860-mRNA-1:exon:16510;Parent=Msa0373860-mRNA-1
chr3_1 exon 72969729 72969853 72969729 ID=Msa0373860-mRNA-1:exon:16509;Parent=Msa0373860-mRNA-1
chr3_1 exon 72970053 72970229 72970053 ID=Msa0373860-mRNA-1:exon:16508;Parent=Msa0373860-mRNA-1
chr3_1 exon 72970321 72970793 72970321 ID=Msa0373860-mRNA-1:exon:16507;Parent=Msa0373860-mRNA-1
chr3_1 five_prime_UTR 72970738 72970793 72970738 ID=Msa0373860-mRNA-1:five_prime_utr;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72970321 72970737 72970321 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72970053 72970229 72970053 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72969729 72969853 72969729 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72969513 72969648 72969513 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72967507 72967656 72967507 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72967360 72967413 72967360 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72967128 72967223 72967128 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72966984 72967043 72966984 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72966759 72966833 72966759 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72966600 72966653 72966600 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72966174 72966275 72966174 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72965448 72966077 72965448 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72965248 72965364 72965248 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72965026 72965133 72965026 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 CDS 72964466 72964615 72964466 ID=Msa0373860-mRNA-1:cds;Parent=Msa0373860-mRNA-1
chr3_1 three_prime_UTR 72964227 72964465 72964227 ID=Msa0373860-mRNA-1:three_prime_utr;Parent=Msa0373860-mRNA-1
Gene Sequence

>Msa0373860

ATGAAACGTAGCCACCACCACCAGAGCCATGCCGCGACGGAGGCATTTCTCCCCTCCGGTCTAAAATCCGAAAAGCTCAGCCTCCCATCACTACAATCAAAGATGAAATGCGACCCTGAAGGCTACGAATCCGAACTCCTCTTAATCCGCAGTCAATTCAATTCCTCCCTTGAACTCTTCCAACAACAATCCGCCATGAACTTCACTTCCATTTCCGGCATCTCCAACGACCCCACTGTCGCCAAAGATCTCGCCGATAAAGCCATGTTCCTCTCTCACCTCACCTCCTTTTACCCTCAACACCTCTCTGAATTCCCTAACAAACTCGCTGAGTTGCTTCGTTGTGCTGCTCGAACACTTCCTTCTGGACTTCGTAACGATTTAGCAAATTCTCTTATACTACTTGTTAATCGTGAGATTGTTAGTATTAAAGATACACTTTCGTTGTTTATGGAGCTTCAAACGTTAGGTGATAAAAAGCTGAGGGAGTTGACGTTTGCACACGTTGTTAAAAGCATAAAACGTATGAACCAAAAGCATAAGGATGAAGCCAAAAACCGTGCACTTCAGAACATTCTTTTTGTCATGTTGCAGCAAGAGGATGAAGACCGGGCCAAGAGGGCGCTTGTGACACTATGTGAACTTCACAAAAGACGAACATGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCATCGTCAAGAATCATGATATCAACATTATGCTTTATGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATGAAAGCAGTGACGAGGAAGCAACCGAATCACCTCAAGTTATTCTTAGAAGGGAGACGGTTTATAAGGCAAGCCACCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAAGGCAATTAGACCGCATAATACGTAACATGAAAAAGAAAGAGCGCGGATCATCTGAAAGGAAGAATAACATCTATTACTCACCACTCAACCATCTTAAAGATCCACAGGGTTTTGTGGAGAAGCTGTTTTCACGTCTGCAGAAATGCAATGAGCGATTTGAGGTCAAGATGATGATGTTGAAAGTGATAGCTCGAACAATTGGGCTTCACCAGTTAATGTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGATGTTACAAATTTGATTGCAGCAGCGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTTAAACAAATTGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCAGTCAGGGAGATATGCCTGCGTATGCCACTGTTAATGAATGAAGACCTACTTCAAGACCTTGCCCTATATAAGAAGTCACATGAGAAAGGAGTTTCGATAGCAGCTCGATCTCTCATTACATTATTCCGAGAGGTTTGCCCTTCACTGCTAATTAAGAAGGACCGAGGGAGGCCTACTGACCCCAAGGCAAGACCAAAGGCTTATGGAGAAGTCAATGTTGCGGCTGACGTTCCTGGTGCTGAGTTGTTGCAGATTATTGATGATGATGTTGAGCAGGAGAGTTCTCATTCTGATGATTGCGGTTCAGAAAATGAGCAGGAAGATGATCAGGTAAGTTTGAACTCTGACGATGACAACCAGCTAGGCAGTGATAATACCGGAAGTGATGATGATGAAGCCGAAGATCATGATGGTGAATCAGACGATGAAAACGATAGAAGTTCTGATTACGAAACCAGTGGTGATGATGCTGATAATGTTGATCTAGAAGACAGTGAAGAGGCTGATGAAGAGGATGGTGGGATTTCGGAACATGAAGGAGATGGTGATCTGCATATTCTTGGAAGTGTGGATACAAAAACTACGTTAAAAGACTCAGCAAAAAAGAGGAAGTTTAGCGATTTCAACGATCAACTTACAGCTGCTGATTCAAGTCTCCGGGCTTTGAAGAAGTTGGCAGGGACAACAATGGAGAATGCCCTGCCAGAAAATGAAGATGGAATTCTTTCCAATGCAGACTTCCAGAGGATCAAGGAACTAAAGGCCAAAAACGAAGCAAGAACTGCATTAGCGCAGCACGGGCTTTTAAAGTCATCAACAAATAAGATTCCAAGCTCTGATCAACTAGGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAAAAAGCTTAACAAGGAGGAGAGGTTGGCAATGGTTAGAGCAGGGAGGGAGGAAAGAGGACAGTACCATGCTCGAGCGGCTGTCAAACAGAAAAAGACGGGTGGTCTAAGTAACAAGCAAAAGGAACACAAGAAACAAATGCCGTTAGTTGCAAAGAGAAAGAAGGTGGCAAGAACTAAGATAGAGAAAAGGATAAAACAGCAGCGGTCTGGTAAACAACAACGTGGGAGGAAAGCGTGGAAATAG

Protein sequence

>Msa0373860

MKRSHHHQSHAATEAFLPSGLKSEKLSLPSLQSKMKCDPEGYESELLLIRSQFNSSLELFQQQSAMNFTSISGISNDPTVAKDLADKAMFLSHLTSFYPQHLSEFPNKLAELLRCAARTLPSGLRNDLANSLILLVNREIVSIKDTLSLFMELQTLGDKKLRELTFAHVVKSIKRMNQKHKDEAKNRALQNILFVMLQQEDEDRAKRALVTLCELHKRRTWFDERTANAICTASFHPSSRIMISTLCFMLDYEKIENYQDSDDESSDEEATESPQVILRRETVYKASHQGTSASKKKKKRQLDRIIRNMKKKERGSSERKNNIYYSPLNHLKDPQGFVEKLFSRLQKCNERFEVKMMMLKVIARTIGLHQLMLLNFYPYLQKYIQPHQRDVTNLIAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRMPLLMNEDLLQDLALYKKSHEKGVSIAARSLITLFREVCPSLLIKKDRGRPTDPKARPKAYGEVNVAADVPGAELLQIIDDDVEQESSHSDDCGSENEQEDDQVSLNSDDDNQLGSDNTGSDDDEAEDHDGESDDENDRSSDYETSGDDADNVDLEDSEEADEEDGGISEHEGDGDLHILGSVDTKTTLKDSAKKRKFSDFNDQLTAADSSLRALKKLAGTTMENALPENEDGILSNADFQRIKELKAKNEARTALAQHGLLKSSTNKIPSSDQLGLKRVDGSMLEAHVKKKLNKEERLAMVRAGREERGQYHARAAVKQKKTGGLSNKQKEHKKQMPLVAKRKKVARTKIEKRIKQQRSGKQQRGRKAWK*