AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0422920


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422920 MtrunA17_Chr3g0123361 97.052 814 15 2 8 816 3 812 0.0 1623
Msa0422920 MtrunA17_Chr4g0000571 45.793 511 198 11 20 521 20 460 3.75e-119 369
Msa0422920 MtrunA17_Chr4g0000561 46.622 444 179 9 20 449 138 537 1.50e-112 353
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0422920 AT1G13160.1 51.691 828 332 10 19 816 15 804 0.0 763
Msa0422920 AT4G31520.1 47.182 763 303 12 89 816 1 698 0.0 642
Msa0422920 AT4G31520.2 45.361 679 271 12 89 732 1 614 0.0 533

Find 198 sgRNAs with CRISPR-Local

Find 463 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATACACTTTCGTTGTTTA+TGG 0.108154 3_2:+72449175 Msa0422920:CDS
TGGCTTCATCCTTATGCTTT+TGG 0.189883 3_2:-72449274 None:intergenic
AGAGAGGTGTTGAGGGTAAA+AGG 0.219783 3_2:-72448931 None:intergenic
CTCATGTGACTTCTTATATA+GGG 0.264350 3_2:-72453172 None:intergenic
TCTCATGTGACTTCTTATAT+AGG 0.264450 3_2:-72453173 None:intergenic
CACCTCAAGTTATTCTTAGA+AGG 0.274420 3_2:+72449874 Msa0422920:CDS
TAAGCCTTTGGTCTTGCCTT+GGG 0.288436 3_2:-72453387 None:intergenic
AGTTCGGATTCGTAGCCTTC+AGG 0.288526 3_2:-72448759 None:intergenic
TGGGAGGAAAGCGTGGAAAT+AGG 0.291046 3_2:+72454927 Msa0422920:CDS
GGCTTTATCGGCGAGATCTT+TGG 0.291467 3_2:-72448886 None:intergenic
ATGAACTTCACTTCCATTTC+CGG 0.293716 3_2:+72448840 Msa0422920:CDS
TTTATAGAATTTCTTTAGAT+TGG 0.299879 3_2:+72455110 Msa0422920:three_prime_UTR
AAAAGTTTAACAACATTAAC+TGG 0.315137 3_2:-72452242 None:intergenic
AGCAACTCAGCGAGTTTGTT+AGG 0.319583 3_2:-72448960 None:intergenic
TAGAAGGGAGACGGTTTATA+AGG 0.324057 3_2:+72449890 Msa0422920:CDS
AGCGGCTGTCAAACAGAAAA+AGG 0.332497 3_2:+72454368 Msa0422920:CDS
TTTGATTGCAGCAGCGGTTC+AGG 0.336211 3_2:+72452398 Msa0422920:CDS
TTTATGGAGCTTCAAACATT+AGG 0.341381 3_2:+72449191 Msa0422920:CDS
TGAAGAGGATGGTGGGATTT+CGG 0.354594 3_2:+72453713 Msa0422920:CDS
AATTTGTAACATCTCGTTGA+TGG 0.369737 3_2:-72452377 None:intergenic
AAAGTGATAGCTCGAACAAT+TGG 0.375067 3_2:+72452213 Msa0422920:CDS
ATAAGCCTTTGGTCTTGCCT+TGG 0.384961 3_2:-72453388 None:intergenic
CCTTTAGTTCCTTGATCCTC+TGG 0.385498 3_2:-72453947 None:intergenic
AGAGAGGAACATGGCTTTAT+CGG 0.386019 3_2:-72448898 None:intergenic
GGCTTCATCATCATCACTTC+CGG 0.386181 3_2:-72453583 None:intergenic
GGTTCAGGCTTGCCATGATA+TGG 0.390505 3_2:+72452413 Msa0422920:CDS
GATGGTGATCTGCATATTCT+TGG 0.390989 3_2:+72453747 Msa0422920:CDS
TTGACTTCTCCATAAGCCTT+TGG 0.392390 3_2:-72453399 None:intergenic
AAGGCAAGACCAAAGGCTTA+TGG 0.393421 3_2:+72453390 Msa0422920:CDS
AAGAATAACTTGAGGTGATT+CGG 0.393544 3_2:-72449868 None:intergenic
TGCTTTCATCATCACTATCT+TGG 0.393872 3_2:-72449830 None:intergenic
AATGTTGCGGCTGACGTTCC+TGG 0.394316 3_2:+72453420 Msa0422920:CDS
CCTCCGTCGCGGCATGGCTC+TGG 0.401059 3_2:-72448665 None:intergenic
GCTGCTCGAACACTTCCTTC+TGG 0.402199 3_2:+72448990 Msa0422920:CDS
GTCGTTGGAGATGCCGGAAA+TGG 0.407008 3_2:-72448853 None:intergenic
GTGGTGGTGGCTACGTTTCA+TGG 0.411738 3_2:-72448643 None:intergenic
GGGAGGAAAGCGTGGAAATA+GGG 0.412726 3_2:+72454928 Msa0422920:CDS
TGGATATATTTCTGAAGATA+AGG 0.421960 3_2:-72452267 None:intergenic
CCCTTCACTGCTAATTAAGA+AGG 0.422140 3_2:+72453344 Msa0422920:CDS
TGAATTGACTGCGGATTAAG+AGG 0.422788 3_2:-72448782 None:intergenic
TTCATCTTTGATTGTAGTGA+TGG 0.428682 3_2:-72448729 None:intergenic
TGATTCACCATCATGATCTT+CGG 0.432423 3_2:-72453604 None:intergenic
CCAGAGGATCAAGGAACTAA+AGG 0.433159 3_2:+72453947 Msa0422920:CDS
AGCTTCTCGTTGATTGCAGT+TGG 0.434838 3_2:-72455043 None:intergenic
AAGAAATAAATGTCTTCCTC+TGG 0.438362 3_2:-72455148 None:intergenic
GGAATTCAGAGAGGTGTTGA+GGG 0.438862 3_2:-72448938 None:intergenic
TATGTTTAGGCTATCACTGT+TGG 0.451491 3_2:+72452756 Msa0422920:intron
AACAAGGGCTCAACTGCATC+AGG 0.452014 3_2:-72452591 None:intergenic
CGGTATTATCACTGCCTAGC+TGG 0.453796 3_2:-72453563 None:intergenic
AAATGAGCAGGAAGATGATC+AGG 0.456808 3_2:+72453515 Msa0422920:CDS
CAGCTGCTGATTCAAGTCTC+CGG 0.457694 3_2:+72453844 Msa0422920:CDS
AGGATAAAACAGCAGCGGTC+TGG 0.462249 3_2:+72454892 Msa0422920:CDS
ATTGTTGTTGGAAGAGTTCA+AGG 0.462630 3_2:-72448812 None:intergenic
CGGCATGGCTCTGGTGGTGG+TGG 0.463339 3_2:-72448656 None:intergenic
ATTTGTAACATCTCGTTGAT+GGG 0.464321 3_2:-72452376 None:intergenic
GAAAATTACGCCAATGAACT+AGG 0.464720 3_2:-72455173 None:intergenic
TTCTTTCTCTTTGCAACTAA+CGG 0.465469 3_2:-72454844 None:intergenic
AAAAGGAGGTGAGGTGAGAG+AGG 0.467153 3_2:-72448914 None:intergenic
GGTCTTGCCTTGGGGTCAGT+AGG 0.471014 3_2:-72453378 None:intergenic
AAACCTGTGGATCTTTAAGA+TGG 0.472028 3_2:-72451893 None:intergenic
CGGGCTTTGAAGAAGTTGGC+AGG 0.472242 3_2:+72453864 Msa0422920:CDS
CTGTTGGAATAAATGCAGTC+AGG 0.474637 3_2:+72452772 Msa0422920:CDS
ACTGCGGATTAAGAGGAGTT+CGG 0.476230 3_2:-72448775 None:intergenic
AGTGGGGTCGTTGGAGATGC+CGG 0.478315 3_2:-72448859 None:intergenic
TGCTAGCTGATGTACCTTGG+TGG 0.479650 3_2:-72451767 None:intergenic
TCCTTCTTAATTAGCAGTGA+AGG 0.480554 3_2:-72453345 None:intergenic
TCACAAGCGCCCTCTTTGCC+CGG 0.481814 3_2:-72449558 None:intergenic
TCGCGGCATGGCTCTGGTGG+TGG 0.485482 3_2:-72448659 None:intergenic
AGCTGCTGATTCAAGTCTCC+GGG 0.485711 3_2:+72453845 Msa0422920:CDS
GCAACTCAGCGAGTTTGTTA+GGG 0.486274 3_2:-72448959 None:intergenic
GGATATATTTCTGAAGATAA+GGG 0.490544 3_2:-72452266 None:intergenic
AAACAAACCTTGACGATGGA+TGG 0.491961 3_2:-72449654 None:intergenic
GGGAATTCAGAGAGGTGTTG+AGG 0.492779 3_2:-72448939 None:intergenic
GTTCGGATTCGTAGCCTTCA+GGG 0.495722 3_2:-72448758 None:intergenic
AAACCTAGTTGATCAGAGCT+TGG 0.498249 3_2:-72454117 None:intergenic
ACGTATGAACCAAAAGCATA+AGG 0.500516 3_2:+72449265 Msa0422920:CDS
AAGTGATAGCTCGAACAATT+GGG 0.501384 3_2:+72452214 Msa0422920:CDS
TGGGGTCAGTAGGCCTCCCT+CGG 0.502050 3_2:-72453368 None:intergenic
GGATGAAGACCGGGCAAAGA+GGG 0.502850 3_2:+72449549 Msa0422920:CDS
GCGAGATCTTTGGCGACAGT+GGG 0.506577 3_2:-72448876 None:intergenic
AGGTTGGCAATGGTTAGAGC+AGG 0.507284 3_2:+72454315 Msa0422920:CDS
TCTCCGGGCTTTGAAGAAGT+TGG 0.508552 3_2:+72453860 Msa0422920:CDS
GAAATGCAATGAGCGATTTG+AGG 0.509530 3_2:+72452037 Msa0422920:CDS
AGTTCATGGCGGATTGTTGT+TGG 0.511020 3_2:-72448824 None:intergenic
TATAAGAAGTCACATGAGAA+AGG 0.511774 3_2:+72453177 Msa0422920:CDS
GGAAATGGAAGTGAAGTTCA+TGG 0.515511 3_2:-72448838 None:intergenic
CTGCCAACTTCTTCAAAGCC+CGG 0.516353 3_2:-72453863 None:intergenic
TTATCTTCAGAAATATATCC+AGG 0.516944 3_2:+72452269 Msa0422920:CDS
CCGTCGCGGCATGGCTCTGG+TGG 0.517615 3_2:-72448662 None:intergenic
GTTGGCTTAACATAAAATAG+AGG 0.517664 3_2:-72455025 None:intergenic
ATTTACAATTTGTTTAAACA+AGG 0.521288 3_2:-72452607 None:intergenic
CAGTGAAGAGGCTGATGAAG+AGG 0.523376 3_2:+72453698 Msa0422920:CDS
TATTGATGATGATGTTGAGC+AGG 0.523614 3_2:+72453461 Msa0422920:CDS
GTTTGACAGCCGCTCGAGCA+TGG 0.525793 3_2:-72454359 None:intergenic
GCTTAACAAGGAGGAGAGGT+TGG 0.526219 3_2:+72454299 Msa0422920:CDS
AAGCCTTTGGTCTTGCCTTG+GGG 0.527111 3_2:-72453386 None:intergenic
CTTAACATAAAATAGAGGTC+CGG 0.528152 3_2:-72455020 None:intergenic
ACCTCAAGTTATTCTTAGAA+GGG 0.528603 3_2:+72449875 Msa0422920:CDS
TGGTCTAAGTAACAAGCAAA+AGG 0.529533 3_2:+72454804 Msa0422920:CDS
TTTGGCGACAGTGGGGTCGT+TGG 0.532255 3_2:-72448868 None:intergenic
GATCCTCTGGAAGTCTGCAT+TGG 0.533194 3_2:-72453934 None:intergenic
CAATATGCAGTACCATATCA+TGG 0.533875 3_2:-72452425 None:intergenic
TCATCTTTGATTGTAGTGAT+GGG 0.534341 3_2:-72448728 None:intergenic
GAAATGCCTCCGTCGCGGCA+TGG 0.534644 3_2:-72448671 None:intergenic
TACAAATTTGATTGCAGCAG+CGG 0.536492 3_2:+72452392 Msa0422920:CDS
CTTCCTTCCATCCATCGTCA+AGG 0.537262 3_2:+72449647 Msa0422920:CDS
AGAACTGCATTAGCGCAGCA+CGG 0.538011 3_2:+72454066 Msa0422920:CDS
AGGCTGATGAAGAGGATGGT+GGG 0.545198 3_2:+72453706 Msa0422920:CDS
TGCAGACTTCCAGAGGATCA+AGG 0.553115 3_2:+72453938 Msa0422920:CDS
ACGGAGGCATTTCTCCCCTC+CGG 0.553911 3_2:+72448681 Msa0422920:CDS
CCACCAGAGCCATGCCGCGA+CGG 0.554993 3_2:+72448662 Msa0422920:CDS
ATTCCAAGCTCTGATCAACT+AGG 0.555451 3_2:+72454114 Msa0422920:CDS
AGTTATTCTTAGAAGGGAGA+CGG 0.556840 3_2:+72449881 Msa0422920:CDS
GGCGAGATCTTTGGCGACAG+TGG 0.557517 3_2:-72448877 None:intergenic
CAACCATCTTAAAGATCCAC+AGG 0.558634 3_2:+72451890 Msa0422920:CDS
AGAGCAGGGAGGGAGGAAAG+AGG 0.560920 3_2:+72454330 Msa0422920:CDS
GCCCTGCCAGAAAATGAAGA+TGG 0.561534 3_2:+72453903 Msa0422920:CDS
ATCTGCAACAACTCAGCACC+AGG 0.561871 3_2:-72453438 None:intergenic
ATAGGGCAAGGTCTTGAAGT+AGG 0.562189 3_2:-72453155 None:intergenic
CAAGAACTAAGATAGAGAAA+AGG 0.563545 3_2:+72454872 Msa0422920:CDS
GAACTGCATTAGCGCAGCAC+GGG 0.565852 3_2:+72454067 Msa0422920:CDS
CTAGGTTTAAAGCGAGTGGA+TGG 0.570555 3_2:+72454132 Msa0422920:CDS
TTGTTGGAAGAGTTCAAGGG+AGG 0.570603 3_2:-72448808 None:intergenic
CCTTCTTAATTAGCAGTGAA+GGG 0.572476 3_2:-72453344 None:intergenic
AATAGCAAGAGGATGAAGAC+CGG 0.575025 3_2:+72449539 Msa0422920:intron
ATTATCAGCATCATCACCAC+TGG 0.575178 3_2:-72453661 None:intergenic
TATACTACTTGTTAATCGTG+AGG 0.577763 3_2:+72449040 Msa0422920:CDS
AGTTCTCATTCTGATGATTG+CGG 0.578631 3_2:+72453486 Msa0422920:CDS
GGCAATGGTTAGAGCAGGGA+GGG 0.578720 3_2:+72454320 Msa0422920:CDS
AACAACGTGGGAGGAAAGCG+TGG 0.583188 3_2:+72454920 Msa0422920:CDS
GTTGAGGGTAAAAGGAGGTG+AGG 0.584102 3_2:-72448923 None:intergenic
AAAAGCTTAACAAGGAGGAG+AGG 0.586507 3_2:+72454295 Msa0422920:CDS
AAACCTTGACGATGGATGGA+AGG 0.587340 3_2:-72449650 None:intergenic
AGGATGAAGACCGGGCAAAG+AGG 0.587878 3_2:+72449548 Msa0422920:CDS
GATATGCCTGCGTATGCCAC+TGG 0.588647 3_2:+72452797 Msa0422920:CDS
CAAGGAGGAGAGGTTGGCAA+TGG 0.589667 3_2:+72454305 Msa0422920:CDS
CAGCTAGGCAGTGATAATAC+CGG 0.590821 3_2:+72453564 Msa0422920:CDS
CCAGAGCCATGCCGCGACGG+AGG 0.592746 3_2:+72448665 Msa0422920:CDS
GTGACTTCTTATATAGGGCA+AGG 0.593175 3_2:-72453167 None:intergenic
GAGGCTGATGAAGAGGATGG+TGG 0.593619 3_2:+72453705 Msa0422920:CDS
TGTTGGAATAAATGCAGTCA+GGG 0.594175 3_2:+72452773 Msa0422920:CDS
TCTTTGATTGTAGTGATGGG+AGG 0.597637 3_2:-72448725 None:intergenic
TTGCGGTTCAGAAAATGAGC+AGG 0.597937 3_2:+72453503 Msa0422920:CDS
TTTCCAATGCAGACTTCCAG+AGG 0.598028 3_2:+72453931 Msa0422920:CDS
TTTACAATTTGTTTAAACAA+GGG 0.598053 3_2:-72452606 None:intergenic
AATGGTTAGAGCAGGGAGGG+AGG 0.598243 3_2:+72454323 Msa0422920:CDS
ATTTCGGAACATGAAGGAGA+TGG 0.601769 3_2:+72453729 Msa0422920:CDS
GGTGAGGTGAGAGAGGAACA+TGG 0.601814 3_2:-72448907 None:intergenic
GGTGGGATTTCGGAACATGA+AGG 0.604100 3_2:+72453723 Msa0422920:CDS
TCAACTAGGTTTAAAGCGAG+TGG 0.604947 3_2:+72454128 Msa0422920:CDS
AGAGCTACTTACTTCAAGCA+TGG 0.609650 3_2:-72454157 None:intergenic
GTTAGTTGCAAAGAGAAAGA+AGG 0.613009 3_2:+72454846 Msa0422920:CDS
GAGGTGTTGAGGGTAAAAGG+AGG 0.613387 3_2:-72448928 None:intergenic
AGGGAGGCCTACTGACCCCA+AGG 0.616449 3_2:+72453371 Msa0422920:CDS
TTTGTAACATCTCGTTGATG+GGG 0.624366 3_2:-72452375 None:intergenic
GGGCTTTGAAGAAGTTGGCA+GGG 0.625113 3_2:+72453865 Msa0422920:CDS
TATGTGAGCTTCACAAGAGA+CGG 0.625829 3_2:+72449584 Msa0422920:CDS
AAATCGTTACGAAGTCCAGA+AGG 0.627630 3_2:-72449005 None:intergenic
AAAGAATGTTCTGAAGTGCA+CGG 0.632826 3_2:-72449301 None:intergenic
TACTTACCAGTGGCATACGC+AGG 0.634401 3_2:-72452803 None:intergenic
AGCTTCACAAGAGACGGACA+TGG 0.637224 3_2:+72449590 Msa0422920:CDS
TCTGCATATTCTTGGAAGTG+TGG 0.637853 3_2:+72453755 Msa0422920:CDS
AAGAGCGCGGATCATCTGAA+AGG 0.638139 3_2:+72451841 Msa0422920:CDS
TGACCCCAAGGCAAGACCAA+AGG 0.640319 3_2:+72453383 Msa0422920:CDS
ATAGCAAGAGGATGAAGACC+GGG 0.645784 3_2:+72449540 Msa0422920:intron
GATTTGATTCTGCATTCCAG+AGG 0.646076 3_2:+72455132 Msa0422920:three_prime_UTR
ACATGACCGCTCACGTCCAG+AGG 0.646176 3_2:+72452638 Msa0422920:CDS
TCTGACGATGACAACCAGCT+AGG 0.648692 3_2:+72453549 Msa0422920:CDS
TGCTAATTAAGAAGGACCGA+GGG 0.650296 3_2:+72453352 Msa0422920:CDS
TGATCTAGAAGACAGTGAAG+AGG 0.650869 3_2:+72453686 Msa0422920:CDS
GGTTGGCAATGGTTAGAGCA+GGG 0.652549 3_2:+72454316 Msa0422920:CDS
GAAGTTGGCAGGGACAACAA+TGG 0.655026 3_2:+72453875 Msa0422920:CDS
CTGCTAATTAAGAAGGACCG+AGG 0.659236 3_2:+72453351 Msa0422920:CDS
AGGACAGTACCATGCTCGAG+CGG 0.659615 3_2:+72454350 Msa0422920:CDS
TGATGATGAAAGCAGTGACG+AGG 0.661264 3_2:+72449839 Msa0422920:CDS
TTGTTGTTGGAAGAGTTCAA+GGG 0.662039 3_2:-72448811 None:intergenic
CTGGTAAACAACAACGTGGG+AGG 0.662104 3_2:+72454911 Msa0422920:CDS
AAGATGAAATGCGACCCTGA+AGG 0.662503 3_2:+72448744 Msa0422920:CDS
TAATTAAGAAGGACCGAGGG+AGG 0.664397 3_2:+72453355 Msa0422920:CDS
TGGCAATGGTTAGAGCAGGG+AGG 0.665731 3_2:+72454319 Msa0422920:CDS
AGAAAAGGATAAAACAGCAG+CGG 0.669573 3_2:+72454887 Msa0422920:CDS
AAGGGCTCAACTGCATCAGG+AGG 0.671557 3_2:-72452588 None:intergenic
TTATGGAGAAGTCAATGTTG+CGG 0.672631 3_2:+72453407 Msa0422920:CDS
AGTTGCAAAGAGAAAGAAGG+TGG 0.672753 3_2:+72454849 Msa0422920:CDS
GGGGAGAAATGCCTCCGTCG+CGG 0.674537 3_2:-72448676 None:intergenic
TAAAGACCTCTGGACGTGAG+CGG 0.676998 3_2:-72452644 None:intergenic
TCTCATTACATTATTCCGAG+AGG 0.680546 3_2:+72453221 Msa0422920:CDS
GTTTGTTAGGGAATTCAGAG+AGG 0.681328 3_2:-72448947 None:intergenic
GGGAGGAATTGAATTGACTG+CGG 0.685428 3_2:-72448791 None:intergenic
CGGTCTGGTAAACAACAACG+TGG 0.692778 3_2:+72454907 Msa0422920:CDS
GGATCTTTAAGATGGTTGAG+TGG 0.692797 3_2:-72451885 None:intergenic
GAAGAGGCTGATGAAGAGGA+TGG 0.693614 3_2:+72453702 Msa0422920:CDS
TCCCTTCTAAGAATAACTTG+AGG 0.695578 3_2:-72449876 None:intergenic
AGTTCTGATTACGAAACCAG+TGG 0.696679 3_2:+72453645 Msa0422920:CDS
GATGAAGCCGAAGATCATGA+TGG 0.710456 3_2:+72453597 Msa0422920:CDS
CGAGATCTTTGGCGACAGTG+GGG 0.730021 3_2:-72448875 None:intergenic
GGTCTGGTAAACAACAACGT+GGG 0.766215 3_2:+72454908 Msa0422920:CDS
AATGGAAGTGAAGTTCATGG+CGG 0.785076 3_2:-72448835 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATATTTGAAGAAATAATT+TGG + chr3_2:72450649-72450668 Msa0422920:intron 10.0%
!! TATATTTGAAGAAATAATTT+GGG + chr3_2:72450650-72450669 Msa0422920:intron 10.0%
!! ATATTTGAAGAAATAATTTG+GGG + chr3_2:72450651-72450670 Msa0422920:intron 15.0%
!!! GTTTTCATATACAATAATAT+AGG - chr3_2:72452092-72452111 None:intergenic 15.0%
!!! TTTACAATTTGTTTAAACAA+GGG - chr3_2:72452609-72452628 None:intergenic 15.0%
!!! ATTTACAATTTGTTTAAACA+AGG - chr3_2:72452610-72452629 None:intergenic 15.0%
!!! ATTTGTTTACTTTTATTCAT+AGG + chr3_2:72454029-72454048 Msa0422920:intron 15.0%
!!! ATATTTTTAAAAATGAGCAA+GGG - chr3_2:72454405-72454424 None:intergenic 15.0%
!!! AATATTTTTAAAAATGAGCA+AGG - chr3_2:72454406-72454425 None:intergenic 15.0%
!! TTTATAGAATTTCTTTAGAT+TGG + chr3_2:72455110-72455129 Msa0422920:three_prime_UTR 15.0%
!!! GTTGTTTGGTTTTTTTTTAT+AGG + chr3_2:72449356-72449375 Msa0422920:intron 20.0%
!!! TTGGTTTAGATTAGTTTTTA+AGG + chr3_2:72449397-72449416 Msa0422920:intron 20.0%
!!! TTTTTTTCTTTTGTTCACTT+TGG + chr3_2:72449674-72449693 Msa0422920:intron 20.0%
!! ATTTACGAACAAAAGATATT+TGG - chr3_2:72450178-72450197 None:intergenic 20.0%
!! TTTAATTAACAAGAAATGCT+TGG + chr3_2:72451381-72451400 Msa0422920:intron 20.0%
!!! AATCACACTTTCAAAATTTT+AGG + chr3_2:72452173-72452192 Msa0422920:intron 20.0%
!! AAAAGTTTAACAACATTAAC+TGG - chr3_2:72452245-72452264 None:intergenic 20.0%
!! TAGTTAAATTTGGTAAACTT+TGG + chr3_2:72452298-72452317 Msa0422920:intron 20.0%
!!! TTAATTGTCTTATGCATTTT+TGG + chr3_2:72454449-72454468 Msa0422920:intron 20.0%
!! AAAAAAATACACATCCATAT+TGG - chr3_2:72454767-72454786 None:intergenic 20.0%
!!! TTTTTTTTGTATTGAACAGA+CGG + chr3_2:72454780-72454799 Msa0422920:intron 20.0%
! TGTAAAATTTGAATAGCAAG+AGG + chr3_2:72449528-72449547 Msa0422920:intron 25.0%
!!! ATATTGGCATTGATTATCTA+AGG + chr3_2:72450046-72450065 Msa0422920:intron 25.0%
! TATATTTAGAAGTTCAGAAG+AGG + chr3_2:72450070-72450089 Msa0422920:intron 25.0%
! ATATTTAGAAGTTCAGAAGA+GGG + chr3_2:72450071-72450090 Msa0422920:intron 25.0%
! ATTTAAACTTGAAATGCCAT+TGG - chr3_2:72450233-72450252 None:intergenic 25.0%
!! TTCTTTTCTTCTAACTTATG+AGG - chr3_2:72450371-72450390 None:intergenic 25.0%
! TGCATGTGCAAATTTAAATA+TGG - chr3_2:72450427-72450446 None:intergenic 25.0%
! TATTTAAATTTGCACATGCA+TGG + chr3_2:72450427-72450446 Msa0422920:intron 25.0%
!! CAAGTTAGCTAAAATTTTCA+AGG + chr3_2:72450548-72450567 Msa0422920:intron 25.0%
! TTGCTTATTTGCTCATTTAA+GGG - chr3_2:72450589-72450608 None:intergenic 25.0%
!!! TTCATAGAAGCTTTAGAATT+AGG + chr3_2:72450623-72450642 Msa0422920:intron 25.0%
! TGATGTGGTATTATATCATT+TGG + chr3_2:72450710-72450729 Msa0422920:intron 25.0%
! GATGTGGTATTATATCATTT+GGG + chr3_2:72450711-72450730 Msa0422920:intron 25.0%
! TTATATCATTTGGGTAGTAT+AGG + chr3_2:72450720-72450739 Msa0422920:intron 25.0%
! TATATCATTTGGGTAGTATA+GGG + chr3_2:72450721-72450740 Msa0422920:intron 25.0%
! ATGTTAACATTCAACTCAAA+TGG - chr3_2:72450861-72450880 None:intergenic 25.0%
! AATTTACGTTCTATTCACTT+AGG + chr3_2:72450892-72450911 Msa0422920:intron 25.0%
! AATACAAAATCCTCCTAATT+TGG + chr3_2:72451019-72451038 Msa0422920:intron 25.0%
! ATACAAAATCCTCCTAATTT+GGG + chr3_2:72451020-72451039 Msa0422920:intron 25.0%
! TCTAGTATGAAAGTAGAAAA+AGG - chr3_2:72451480-72451499 None:intergenic 25.0%
! AACTTAGTTATCAGTAATCA+TGG + chr3_2:72451718-72451737 Msa0422920:intron 25.0%
! ACTTAGTTATCAGTAATCAT+GGG + chr3_2:72451719-72451738 Msa0422920:intron 25.0%
!! GGTCATTCTTACAAAATTTT+AGG + chr3_2:72451740-72451759 Msa0422920:intron 25.0%
! CTAGCAAAAAGAAAAAGAAA+AGG + chr3_2:72451784-72451803 Msa0422920:CDS 25.0%
!! TTTTCATGTTACGTATTATG+CGG - chr3_2:72451818-72451837 None:intergenic 25.0%
! TACAAAAATTTACAAACCTG+TGG - chr3_2:72451909-72451928 None:intergenic 25.0%
! AATCATTGGAAGATTTCAAA+AGG - chr3_2:72452123-72452142 None:intergenic 25.0%
! ATTGTACAAACCAGTAAATA+TGG - chr3_2:72452156-72452175 None:intergenic 25.0%
!! GGATATATTTCTGAAGATAA+GGG - chr3_2:72452269-72452288 None:intergenic 25.0%
!! TGGATATATTTCTGAAGATA+AGG - chr3_2:72452270-72452289 None:intergenic 25.0%
! TTATCTTCAGAAATATATCC+AGG + chr3_2:72452269-72452288 Msa0422920:CDS 25.0%
! CAAATTTAACTAAAGATACC+TGG - chr3_2:72452290-72452309 None:intergenic 25.0%
! CAGGTATCTTTAGTTAAATT+TGG + chr3_2:72452288-72452307 Msa0422920:intron 25.0%
! TTTGTATCCTATTTCATTCA+AGG + chr3_2:72452544-72452563 Msa0422920:intron 25.0%
! AATAACACCTTGAATGAAAT+AGG - chr3_2:72452554-72452573 None:intergenic 25.0%
!!! TTCATTCAAGGTGTTATTTT+TGG + chr3_2:72452556-72452575 Msa0422920:intron 25.0%
! CACAATCAAAATATCAACAT+AGG - chr3_2:72453113-72453132 None:intergenic 25.0%
!!! CTATGTTGATATTTTGATTG+TGG + chr3_2:72453111-72453130 Msa0422920:intron 25.0%
! TGTAAAGAAAAAGCTTAACA+AGG + chr3_2:72454287-72454306 Msa0422920:CDS 25.0%
!! AATTCTAGATGTCATGTTTT+GGG - chr3_2:72454492-72454511 None:intergenic 25.0%
!! AAATTCTAGATGTCATGTTT+TGG - chr3_2:72454493-72454512 None:intergenic 25.0%
! TGTTATATTTGGAGAATCAT+TGG - chr3_2:72454525-72454544 None:intergenic 25.0%
!!! TTTTTTTGTATTGAACAGAC+GGG + chr3_2:72454781-72454800 Msa0422920:intron 25.0%
!!! AGAATGTACCATTTTTTTTC+CGG + chr3_2:72455001-72455020 Msa0422920:three_prime_UTR 25.0%
!! TATTTCTTTTCCTAGTTCAT+TGG + chr3_2:72455163-72455182 Msa0422920:three_prime_UTR 25.0%
TCATCTTTGATTGTAGTGAT+GGG - chr3_2:72448731-72448750 None:intergenic 30.0%
TTCATCTTTGATTGTAGTGA+TGG - chr3_2:72448732-72448751 None:intergenic 30.0%
! TATACTACTTGTTAATCGTG+AGG + chr3_2:72449040-72449059 Msa0422920:CDS 30.0%
!! TGTTGAGTTTGTTATGTGAT+TGG + chr3_2:72449077-72449096 Msa0422920:intron 30.0%
!! GTTTGTTATGTGATTGGAAA+TGG + chr3_2:72449083-72449102 Msa0422920:intron 30.0%
AGATACACTTTCGTTGTTTA+TGG + chr3_2:72449175-72449194 Msa0422920:CDS 30.0%
TTTATGGAGCTTCAAACATT+AGG + chr3_2:72449191-72449210 Msa0422920:CDS 30.0%
ATTAGGTGATAAAAAGCTGA+GGG + chr3_2:72449208-72449227 Msa0422920:CDS 30.0%
! GATTGTGTTTTGTGTTTGTT+TGG + chr3_2:72449378-72449397 Msa0422920:intron 30.0%
CTAACTTAGAATTGTGTGTT+TGG - chr3_2:72449498-72449517 None:intergenic 30.0%
CACAATTCTAAGTTAGTGAA+TGG + chr3_2:72449502-72449521 Msa0422920:intron 30.0%
AAAAAAACAAACCTTGACGA+TGG - chr3_2:72449661-72449680 None:intergenic 30.0%
AAGAATAACTTGAGGTGATT+CGG - chr3_2:72449871-72449890 None:intergenic 30.0%
ACCTCAAGTTATTCTTAGAA+GGG + chr3_2:72449875-72449894 Msa0422920:CDS 30.0%
! TACTCTGTTTGAGTTTAGAA+AGG - chr3_2:72450003-72450022 None:intergenic 30.0%
!! TAAGTTGATATGCACGATAT+TGG + chr3_2:72450030-72450049 Msa0422920:intron 30.0%
TGGCACTTCCAAAAAAATAA+GGG - chr3_2:72450213-72450232 None:intergenic 30.0%
TTGGCACTTCCAAAAAAATA+AGG - chr3_2:72450214-72450233 None:intergenic 30.0%
!!! TATTTTTTTGGAAGTGCCAA+TGG + chr3_2:72450214-72450233 Msa0422920:intron 30.0%
TTATTTATGAACTTGCGTAG+TGG - chr3_2:72450283-72450302 None:intergenic 30.0%
AAGAAAAGAATTCAGATCGA+AGG + chr3_2:72450381-72450400 Msa0422920:intron 30.0%
GCTATGTATTCTATTTACCA+AGG - chr3_2:72450496-72450515 None:intergenic 30.0%
CTTGCTTATTTGCTCATTTA+AGG - chr3_2:72450590-72450609 None:intergenic 30.0%
GTGATTAATATCGAATGATG+TGG + chr3_2:72450695-72450714 Msa0422920:intron 30.0%
ATATCATTTGGGTAGTATAG+GGG + chr3_2:72450722-72450741 Msa0422920:intron 30.0%
GATTAGATAGACAAGAAAAG+TGG + chr3_2:72450760-72450779 Msa0422920:intron 30.0%
!! ATAGCTTTGGAAAAAAAGGA+AGG + chr3_2:72450948-72450967 Msa0422920:intron 30.0%
TACAAAATCCTCCTAATTTG+GGG + chr3_2:72451021-72451040 Msa0422920:intron 30.0%
GAACTCAAAAATTGTATTGG+AGG + chr3_2:72451044-72451063 Msa0422920:intron 30.0%
TTCAATCTCTGTATATGTGT+GGG - chr3_2:72451326-72451345 None:intergenic 30.0%
TAACAAGAAATGCTTGGTTA+TGG + chr3_2:72451387-72451406 Msa0422920:intron 30.0%
TCATATGAGATAAGGATGTT+AGG + chr3_2:72451569-72451588 Msa0422920:intron 30.0%
! CATAGAATCAAGTTGTTGAT+TGG - chr3_2:72451975-72451994 None:intergenic 30.0%
TTGATTCTATGTGATCTACA+GGG + chr3_2:72451984-72452003 Msa0422920:intron 30.0%
! ATAATATAGGCATGTTGCTT+TGG - chr3_2:72452079-72452098 None:intergenic 30.0%
ATGGAGTCTTCAATAATCAT+TGG - chr3_2:72452137-72452156 None:intergenic 30.0%
ATTGAAGACTCCATATTTAC+TGG + chr3_2:72452143-72452162 Msa0422920:intron 30.0%
ATTTGTAACATCTCGTTGAT+GGG - chr3_2:72452379-72452398 None:intergenic 30.0%
AATTTGTAACATCTCGTTGA+TGG - chr3_2:72452380-72452399 None:intergenic 30.0%
!!! ACCAGTTTTGTTTTTATCGT+TGG + chr3_2:72452460-72452479 Msa0422920:intron 30.0%
ACCAACGATAAAAACAAAAC+TGG - chr3_2:72452464-72452483 None:intergenic 30.0%
!!! AGTTTTGTTTTTATCGTTGG+TGG + chr3_2:72452463-72452482 Msa0422920:intron 30.0%
AAGATTGAAATAAAGACCTC+TGG - chr3_2:72452657-72452676 None:intergenic 30.0%
TATCATTTGATATAGTGCTG+CGG + chr3_2:72452679-72452698 Msa0422920:intron 30.0%
! TGAGTTTGGTTGATATGTTT+AGG + chr3_2:72452743-72452762 Msa0422920:intron 30.0%
AAAATTTCAGTACTTACCAG+TGG - chr3_2:72452816-72452835 None:intergenic 30.0%
!!! TGGTAAGTACTGAAATTTTC+CGG + chr3_2:72452817-72452836 Msa0422920:intron 30.0%
GCAAAATGCATATATTTCCA+AGG - chr3_2:72452844-72452863 None:intergenic 30.0%
ACTAATGAAAGAACACATGT+AGG - chr3_2:72452971-72452990 None:intergenic 30.0%
!!! CAGGATATAGTTTTAAGCAA+AGG - chr3_2:72453055-72453074 None:intergenic 30.0%
ATGAAGTTAACAGAAAACAC+AGG - chr3_2:72453074-72453093 None:intergenic 30.0%
AAAATATCAACATAGGACGA+AGG - chr3_2:72453106-72453125 None:intergenic 30.0%
CTCATGTGACTTCTTATATA+GGG - chr3_2:72453175-72453194 None:intergenic 30.0%
TCTCATGTGACTTCTTATAT+AGG - chr3_2:72453176-72453195 None:intergenic 30.0%
TATAAGAAGTCACATGAGAA+AGG + chr3_2:72453177-72453196 Msa0422920:CDS 30.0%
CAAACAACATTAATCAAGTG+TGG - chr3_2:72453312-72453331 None:intergenic 30.0%
! GATTAATGTTGTTTGTTTGC+AGG + chr3_2:72453317-72453336 Msa0422920:intron 30.0%
TAAAAGACTCAGCAAAAAAG+AGG + chr3_2:72453793-72453812 Msa0422920:CDS 30.0%
! AGAATTCCATCTTCATTTTC+TGG - chr3_2:72453912-72453931 None:intergenic 30.0%
!!! AATTTTAGCTTGCTGATAAG+AGG - chr3_2:72453981-72454000 None:intergenic 30.0%
CATGACAAAAAGAGAAAACA+CGG + chr3_2:72454222-72454241 Msa0422920:intron 30.0%
ATGACAAAAAGAGAAAACAC+GGG + chr3_2:72454223-72454242 Msa0422920:intron 30.0%
AAAGAAAAAGCTTAACAAGG+AGG + chr3_2:72454290-72454309 Msa0422920:CDS 30.0%
ATTCTCCAAATATAACAGTG+TGG + chr3_2:72454528-72454547 Msa0422920:intron 30.0%
TATTGCCACACTGTTATATT+TGG - chr3_2:72454536-72454555 None:intergenic 30.0%
! TGTGGTTCTGTTTATCAATT+TGG - chr3_2:72454593-72454612 None:intergenic 30.0%
!! TAACATTTTGATCAACTGAC+TGG - chr3_2:72454625-72454644 None:intergenic 30.0%
TTCTTTCTCTTTGCAACTAA+CGG - chr3_2:72454847-72454866 None:intergenic 30.0%
CAAGAACTAAGATAGAGAAA+AGG + chr3_2:72454872-72454891 Msa0422920:CDS 30.0%
CTTAACATAAAATAGAGGTC+CGG - chr3_2:72455023-72455042 None:intergenic 30.0%
! GTTGGCTTAACATAAAATAG+AGG - chr3_2:72455028-72455047 None:intergenic 30.0%
AAGAAATAAATGTCTTCCTC+TGG - chr3_2:72455151-72455170 None:intergenic 30.0%
! TTGTTGTTGGAAGAGTTCAA+GGG - chr3_2:72448814-72448833 None:intergenic 35.0%
! ATTGTTGTTGGAAGAGTTCA+AGG - chr3_2:72448815-72448834 None:intergenic 35.0%
ATGAACTTCACTTCCATTTC+CGG + chr3_2:72448840-72448859 Msa0422920:CDS 35.0%
CATTAGGTGATAAAAAGCTG+AGG + chr3_2:72449207-72449226 Msa0422920:CDS 35.0%
! ACGTATGAACCAAAAGCATA+AGG + chr3_2:72449265-72449284 Msa0422920:CDS 35.0%
!! AAAGAATGTTCTGAAGTGCA+CGG - chr3_2:72449304-72449323 None:intergenic 35.0%
! CATTCTTTTTGTCATGTTGC+AGG + chr3_2:72449316-72449335 Msa0422920:CDS 35.0%
! GTCAATGTTTCTACGTTGTT+TGG + chr3_2:72449342-72449361 Msa0422920:intron 35.0%
TGCTTTCATCATCACTATCT+TGG - chr3_2:72449833-72449852 None:intergenic 35.0%
CACCTCAAGTTATTCTTAGA+AGG + chr3_2:72449874-72449893 Msa0422920:CDS 35.0%
! TCCCTTCTAAGAATAACTTG+AGG - chr3_2:72449879-72449898 None:intergenic 35.0%
AGTTATTCTTAGAAGGGAGA+CGG + chr3_2:72449881-72449900 Msa0422920:CDS 35.0%
TGCAACAAAGATCAGATCTA+CGG + chr3_2:72450303-72450322 Msa0422920:intron 35.0%
! AAGAAATAATTTGGGGCTGA+GGG + chr3_2:72450658-72450677 Msa0422920:intron 35.0%
GATATGACTTCAGATGAAGA+TGG - chr3_2:72450813-72450832 None:intergenic 35.0%
!! TTAGGCTTTGTTTGTGAGTT+TGG + chr3_2:72450910-72450929 Msa0422920:intron 35.0%
ACAAAATCCTCCTAATTTGG+GGG + chr3_2:72451022-72451041 Msa0422920:intron 35.0%
!!! TTTTTGAGTTCCCCCAAATT+AGG - chr3_2:72451035-72451054 None:intergenic 35.0%
GGGGAACTCAAAAATTGTAT+TGG + chr3_2:72451041-72451060 Msa0422920:intron 35.0%
CTCAAAAATTGTATTGGAGG+AGG + chr3_2:72451047-72451066 Msa0422920:intron 35.0%
! ATTGTATTGGAGGAGGATTT+TGG + chr3_2:72451054-72451073 Msa0422920:intron 35.0%
TTAAATTGCGTTCTCTAGTC+CGG + chr3_2:72451297-72451316 Msa0422920:intron 35.0%
GTTCAATCTCTGTATATGTG+TGG - chr3_2:72451327-72451346 None:intergenic 35.0%
TGGCAAATATCACTTATACG+AGG + chr3_2:72451407-72451426 Msa0422920:intron 35.0%
GAGGAAAAAAAATGTCTGAC+CGG + chr3_2:72451426-72451445 Msa0422920:intron 35.0%
ATTTGAGCTGAATTCTCTTC+CGG - chr3_2:72451448-72451467 None:intergenic 35.0%
AACTTGAAGCTAAGTTTGGA+GGG - chr3_2:72451529-72451548 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG - chr3_2:72451533-72451552 None:intergenic 35.0%
AACTTGAAGCTAAGTTTGGA+TGG - chr3_2:72451529-72451548 None:intergenic 35.0%
AAGGAACTTGAAGCTAAGTT+TGG - chr3_2:72451533-72451552 None:intergenic 35.0%
AACATGAAAAAGAAAGAGCG+CGG + chr3_2:72451828-72451847 Msa0422920:CDS 35.0%
! AAACCTGTGGATCTTTAAGA+TGG - chr3_2:72451896-72451915 None:intergenic 35.0%
CTTGATTCTATGTGATCTAC+AGG + chr3_2:72451983-72452002 Msa0422920:intron 35.0%
AAAGTGATAGCTCGAACAAT+TGG + chr3_2:72452213-72452232 Msa0422920:CDS 35.0%
AAGTGATAGCTCGAACAATT+GGG + chr3_2:72452214-72452233 Msa0422920:CDS 35.0%
TTTGTAACATCTCGTTGATG+GGG - chr3_2:72452378-72452397 None:intergenic 35.0%
TACAAATTTGATTGCAGCAG+CGG + chr3_2:72452392-72452411 Msa0422920:CDS 35.0%
CAATATGCAGTACCATATCA+TGG - chr3_2:72452428-72452447 None:intergenic 35.0%
!!! AAGGTGTTATTTTTGGATGC+AGG + chr3_2:72452563-72452582 Msa0422920:intron 35.0%
! TGCGGACTTTTTATTATGAC+AGG + chr3_2:72452697-72452716 Msa0422920:intron 35.0%
TATGTTTAGGCTATCACTGT+TGG + chr3_2:72452756-72452775 Msa0422920:intron 35.0%
TGTTGGAATAAATGCAGTCA+GGG + chr3_2:72452773-72452792 Msa0422920:CDS 35.0%
ATGCATATATTTCCAAGGAC+CGG - chr3_2:72452839-72452858 None:intergenic 35.0%
TAGATAAAACCAACCCTTGT+TGG - chr3_2:72452901-72452920 None:intergenic 35.0%
!!! AAGGGTTGGTTTTATCTAGT+AGG + chr3_2:72452903-72452922 Msa0422920:intron 35.0%
! CATACTGAACAAAGTACTCA+TGG - chr3_2:72453001-72453020 None:intergenic 35.0%
TCTCATTACATTATTCCGAG+AGG + chr3_2:72453221-72453240 Msa0422920:CDS 35.0%
! ATTACCGTAACTCTTTTGTG+TGG + chr3_2:72453246-72453265 Msa0422920:intron 35.0%
! TTACCGTAACTCTTTTGTGT+GGG + chr3_2:72453247-72453266 Msa0422920:intron 35.0%
CCTTCTTAATTAGCAGTGAA+GGG - chr3_2:72453347-72453366 None:intergenic 35.0%
TCCTTCTTAATTAGCAGTGA+AGG - chr3_2:72453348-72453367 None:intergenic 35.0%
TTATGGAGAAGTCAATGTTG+CGG + chr3_2:72453407-72453426 Msa0422920:CDS 35.0%
!! TATTGATGATGATGTTGAGC+AGG + chr3_2:72453461-72453480 Msa0422920:CDS 35.0%
AGTTCTCATTCTGATGATTG+CGG + chr3_2:72453486-72453505 Msa0422920:CDS 35.0%
TGATTCACCATCATGATCTT+CGG - chr3_2:72453607-72453626 None:intergenic 35.0%
! CGTGTTTTCTCTTTTTGTCA+TGG - chr3_2:72454224-72454243 None:intergenic 35.0%
TATTTATGTGTGCACCTTCT+AGG + chr3_2:72454260-72454279 Msa0422920:intron 35.0%
TTTCTTTACATGAGCCTAGA+AGG - chr3_2:72454277-72454296 None:intergenic 35.0%
!! TTTGGAGAATCATTGGTTTG+TGG - chr3_2:72454518-72454537 None:intergenic 35.0%
!!! ACTGACTGGTTTTAATAGTG+TGG - chr3_2:72454611-72454630 None:intergenic 35.0%
GATTGCACTCTAATCCAATA+TGG + chr3_2:72454750-72454769 Msa0422920:intron 35.0%
TGGTCTAAGTAACAAGCAAA+AGG + chr3_2:72454804-72454823 Msa0422920:CDS 35.0%
GTTAGTTGCAAAGAGAAAGA+AGG + chr3_2:72454846-72454865 Msa0422920:CDS 35.0%
AGAAAAGGATAAAACAGCAG+CGG + chr3_2:72454887-72454906 Msa0422920:CDS 35.0%
ATAGAGGTCCGGAAAAAAAA+TGG - chr3_2:72455012-72455031 None:intergenic 35.0%
! TTTTCGGATTTTAGACCGGA+GGG - chr3_2:72448699-72448718 None:intergenic 40.0%
! GAGCTTTTCGGATTTTAGAC+CGG - chr3_2:72448703-72448722 None:intergenic 40.0%
! TCTTTGATTGTAGTGATGGG+AGG - chr3_2:72448728-72448747 None:intergenic 40.0%
! TGAATTGACTGCGGATTAAG+AGG - chr3_2:72448785-72448804 None:intergenic 40.0%
AATGGAAGTGAAGTTCATGG+CGG - chr3_2:72448838-72448857 None:intergenic 40.0%
GGAAATGGAAGTGAAGTTCA+TGG - chr3_2:72448841-72448860 None:intergenic 40.0%
!! AGAGAGGAACATGGCTTTAT+CGG - chr3_2:72448901-72448920 None:intergenic 40.0%
! GTTTGTTAGGGAATTCAGAG+AGG - chr3_2:72448950-72448969 None:intergenic 40.0%
AAATCGTTACGAAGTCCAGA+AGG - chr3_2:72449008-72449027 None:intergenic 40.0%
GGAAATGGAAAGTTGTGTGT+TGG + chr3_2:72449098-72449117 Msa0422920:intron 40.0%
! TGGCTTCATCCTTATGCTTT+TGG - chr3_2:72449277-72449296 None:intergenic 40.0%
AATAGCAAGAGGATGAAGAC+CGG + chr3_2:72449539-72449558 Msa0422920:intron 40.0%
TATGTGAGCTTCACAAGAGA+CGG + chr3_2:72449584-72449603 Msa0422920:CDS 40.0%
AAACAAACCTTGACGATGGA+TGG - chr3_2:72449657-72449676 None:intergenic 40.0%
TAGAAGGGAGACGGTTTATA+AGG + chr3_2:72449890-72449909 Msa0422920:CDS 40.0%
TTTAGAAGTTCAGAAGAGGG+TGG + chr3_2:72450074-72450093 Msa0422920:intron 40.0%
TTAGAAGTTCAGAAGAGGGT+GGG + chr3_2:72450075-72450094 Msa0422920:intron 40.0%
!! TGGGTGAAATTTTGATGCAG+CGG + chr3_2:72450100-72450119 Msa0422920:intron 40.0%
!! GAAATTTTGATGCAGCGGAA+AGG + chr3_2:72450105-72450124 Msa0422920:intron 40.0%
!!! GAGTCGAGCCCTTATTTTTT+TGG + chr3_2:72450202-72450221 Msa0422920:intron 40.0%
TTGAGCATGCTTTAACACCT+TGG + chr3_2:72450476-72450495 Msa0422920:intron 40.0%
GCTTCTATGAATGCTAACTC+AGG - chr3_2:72450614-72450633 None:intergenic 40.0%
! GAAGAAATAATTTGGGGCTG+AGG + chr3_2:72450657-72450676 Msa0422920:intron 40.0%
!! AGAAAAGTGGACTGTTCTTG+AGG + chr3_2:72450773-72450792 Msa0422920:intron 40.0%
!! GAAAAGTGGACTGTTCTTGA+GGG + chr3_2:72450774-72450793 Msa0422920:intron 40.0%
!! AAAAGTGGACTGTTCTTGAG+GGG + chr3_2:72450775-72450794 Msa0422920:intron 40.0%
!! GCTTTGTTTGTGAGTTTGGA+GGG + chr3_2:72450914-72450933 Msa0422920:intron 40.0%
!! GGGGATAGCTTTGGAAAAAA+AGG + chr3_2:72450944-72450963 Msa0422920:intron 40.0%
GAAAAAAAGGAAGGAGCAGA+TGG + chr3_2:72450957-72450976 Msa0422920:intron 40.0%
! TATTGGAGGAGGATTTTGGA+GGG + chr3_2:72451058-72451077 Msa0422920:intron 40.0%
GTGGGAAATATAGGGGAAAT+TGG - chr3_2:72451210-72451229 None:intergenic 40.0%
TTTGGGAGGTGGGAAATATA+GGG - chr3_2:72451218-72451237 None:intergenic 40.0%
TCTGTATATGTGTGGGATAC+CGG - chr3_2:72451319-72451338 None:intergenic 40.0%
GAGATTGAACTCAATAGTGC+AGG + chr3_2:72451337-72451356 Msa0422920:intron 40.0%
GGAAGAGAATTCAGCTCAAA+TGG + chr3_2:72451447-72451466 Msa0422920:intron 40.0%
GAACTTGAAGCTAAGTTTGG+AGG - chr3_2:72451530-72451549 None:intergenic 40.0%
GCACTCGTTCATATGAGATA+AGG + chr3_2:72451561-72451580 Msa0422920:intron 40.0%
TGAAGCTAAGTTTGGATGGA+GGG - chr3_2:72451602-72451621 None:intergenic 40.0%
TTGAAGCTAAGTTTGGATGG+AGG - chr3_2:72451603-72451622 None:intergenic 40.0%
CATCCTTATCTCCTATGAAC+GGG - chr3_2:72451644-72451663 None:intergenic 40.0%
GCATCCTTATCTCCTATGAA+CGG - chr3_2:72451645-72451664 None:intergenic 40.0%
TCATAGGAGATAAGGATGCT+AGG + chr3_2:72451646-72451665 Msa0422920:intron 40.0%
! AAATTTTAGGCAAGCCACCA+AGG + chr3_2:72451753-72451772 Msa0422920:intron 40.0%
! TTTTGCTAGCTGATGTACCT+TGG - chr3_2:72451773-72451792 None:intergenic 40.0%
!! GGATCTTTAAGATGGTTGAG+TGG - chr3_2:72451888-72451907 None:intergenic 40.0%
CAACCATCTTAAAGATCCAC+AGG + chr3_2:72451890-72451909 Msa0422920:CDS 40.0%
GGATAGAGCAAAATGCAAAC+AGG - chr3_2:72451954-72451973 None:intergenic 40.0%
! ATGTGATCTACAGGGTTTTG+TGG + chr3_2:72451992-72452011 Msa0422920:intron 40.0%
GAAATGCAATGAGCGATTTG+AGG + chr3_2:72452037-72452056 Msa0422920:CDS 40.0%
!! CAGGAGTACTCAACTTTGAT+TGG + chr3_2:72452716-72452735 Msa0422920:intron 40.0%
! CTTTGATTGGCTGATGAGTT+TGG + chr3_2:72452729-72452748 Msa0422920:intron 40.0%
CTGTTGGAATAAATGCAGTC+AGG + chr3_2:72452772-72452791 Msa0422920:CDS 40.0%
! TACTGAAATTTTCCGGTCCT+TGG + chr3_2:72452824-72452843 Msa0422920:intron 40.0%
TATATCTTGCGCATCCAACA+AGG + chr3_2:72452884-72452903 Msa0422920:intron 40.0%
ATATCTTGCGCATCCAACAA+GGG + chr3_2:72452885-72452904 Msa0422920:intron 40.0%
ACTAAGCTGACTAAAAGTCC+TGG + chr3_2:72452931-72452950 Msa0422920:intron 40.0%
TAGGAATCAAACTCAAGACC+AGG - chr3_2:72452952-72452971 None:intergenic 40.0%
AAAGGAGTTATCCCATTCCA+AGG - chr3_2:72453037-72453056 None:intergenic 40.0%
TATCAACATAGGACGAAGGA+AGG - chr3_2:72453102-72453121 None:intergenic 40.0%
GTGACTTCTTATATAGGGCA+AGG - chr3_2:72453170-72453189 None:intergenic 40.0%
GAGTTACGGTAATTACCTCT+CGG - chr3_2:72453239-72453258 None:intergenic 40.0%
! TACCGTAACTCTTTTGTGTG+GGG + chr3_2:72453248-72453267 Msa0422920:intron 40.0%
!! TGAGTATGAGAGTGCTATTG+TGG - chr3_2:72453285-72453304 None:intergenic 40.0%
CCCTTCACTGCTAATTAAGA+AGG + chr3_2:72453344-72453363 Msa0422920:CDS 40.0%
TGCTAATTAAGAAGGACCGA+GGG + chr3_2:72453352-72453371 Msa0422920:CDS 40.0%
TTGACTTCTCCATAAGCCTT+TGG - chr3_2:72453402-72453421 None:intergenic 40.0%
AAATGAGCAGGAAGATGATC+AGG + chr3_2:72453515-72453534 Msa0422920:CDS 40.0%
! AGTTCTGATTACGAAACCAG+TGG + chr3_2:72453645-72453664 Msa0422920:CDS 40.0%
ATTATCAGCATCATCACCAC+TGG - chr3_2:72453664-72453683 None:intergenic 40.0%
TGATCTAGAAGACAGTGAAG+AGG + chr3_2:72453686-72453705 Msa0422920:CDS 40.0%
ATTTCGGAACATGAAGGAGA+TGG + chr3_2:72453729-72453748 Msa0422920:CDS 40.0%
GATGGTGATCTGCATATTCT+TGG + chr3_2:72453747-72453766 Msa0422920:CDS 40.0%
TCTGCATATTCTTGGAAGTG+TGG + chr3_2:72453755-72453774 Msa0422920:CDS 40.0%
!! TCCATCTTCATTTTCTGGCA+GGG - chr3_2:72453907-72453926 None:intergenic 40.0%
!! TTCCATCTTCATTTTCTGGC+AGG - chr3_2:72453908-72453927 None:intergenic 40.0%
! TGCAGTTCTTGCTTCGTTTT+TGG - chr3_2:72454055-72454074 None:intergenic 40.0%
! ATTCCAAGCTCTGATCAACT+AGG + chr3_2:72454114-72454133 Msa0422920:CDS 40.0%
AAACCTAGTTGATCAGAGCT+TGG - chr3_2:72454120-72454139 None:intergenic 40.0%
! TCAACTAGGTTTAAAGCGAG+TGG + chr3_2:72454128-72454147 Msa0422920:CDS 40.0%
AGAGCTACTTACTTCAAGCA+TGG - chr3_2:72454160-72454179 None:intergenic 40.0%
AAAAGCTTAACAAGGAGGAG+AGG + chr3_2:72454295-72454314 Msa0422920:CDS 40.0%
! TTTTGTATTGAACAGACGGG+TGG + chr3_2:72454784-72454803 Msa0422920:intron 40.0%
AGTTGCAAAGAGAAAGAAGG+TGG + chr3_2:72454849-72454868 Msa0422920:CDS 40.0%
GATTTGATTCTGCATTCCAG+AGG + chr3_2:72455132-72455151 Msa0422920:three_prime_UTR 40.0%
! TTTCGGATTTTAGACCGGAG+GGG - chr3_2:72448698-72448717 None:intergenic 45.0%
! CTTTTCGGATTTTAGACCGG+AGG - chr3_2:72448700-72448719 None:intergenic 45.0%
AAGATGAAATGCGACCCTGA+AGG + chr3_2:72448744-72448763 Msa0422920:CDS 45.0%
! ACTGCGGATTAAGAGGAGTT+CGG - chr3_2:72448778-72448797 None:intergenic 45.0%
GGGAGGAATTGAATTGACTG+CGG - chr3_2:72448794-72448813 None:intergenic 45.0%
TTGTTGGAAGAGTTCAAGGG+AGG - chr3_2:72448811-72448830 None:intergenic 45.0%
!! AGTTCATGGCGGATTGTTGT+TGG - chr3_2:72448827-72448846 None:intergenic 45.0%
!! AGAGAGGTGTTGAGGGTAAA+AGG - chr3_2:72448934-72448953 None:intergenic 45.0%
!! GGAATTCAGAGAGGTGTTGA+GGG - chr3_2:72448941-72448960 None:intergenic 45.0%
!! GCAACTCAGCGAGTTTGTTA+GGG - chr3_2:72448962-72448981 None:intergenic 45.0%
! AGCAACTCAGCGAGTTTGTT+AGG - chr3_2:72448963-72448982 None:intergenic 45.0%
!!! GTTCTGAAGTGCACGGTTTT+TGG - chr3_2:72449297-72449316 None:intergenic 45.0%
ATAGCAAGAGGATGAAGACC+GGG + chr3_2:72449540-72449559 Msa0422920:intron 45.0%
AAACCTTGACGATGGATGGA+AGG - chr3_2:72449653-72449672 None:intergenic 45.0%
! TGATGATGAAAGCAGTGACG+AGG + chr3_2:72449839-72449858 Msa0422920:CDS 45.0%
GAGACGGTTTATAAGGTGAG+AGG + chr3_2:72449897-72449916 Msa0422920:intron 45.0%
TAGAAGTTCAGAAGAGGGTG+GGG + chr3_2:72450076-72450095 Msa0422920:intron 45.0%
TTCTTGAGGGGATTGACAGA+GGG + chr3_2:72450787-72450806 Msa0422920:intron 45.0%
!! GGCTTTGTTTGTGAGTTTGG+AGG + chr3_2:72450913-72450932 Msa0422920:intron 45.0%
GTTTGTGAGTTTGGAGGGAA+AGG + chr3_2:72450919-72450938 Msa0422920:intron 45.0%
GAGCAGATGGAAGAAGTTGA+GGG + chr3_2:72450970-72450989 Msa0422920:intron 45.0%
! TGGAAGAAGTTGAGGGCTTT+TGG + chr3_2:72450977-72450996 Msa0422920:intron 45.0%
! GGAAGAAGTTGAGGGCTTTT+GGG + chr3_2:72450978-72450997 Msa0422920:intron 45.0%
! GAAGAAGTTGAGGGCTTTTG+GGG + chr3_2:72450979-72450998 Msa0422920:intron 45.0%
! AAGAAGTTGAGGGCTTTTGG+GGG + chr3_2:72450980-72450999 Msa0422920:intron 45.0%
TTGAGTTCCCCCAAATTAGG+AGG - chr3_2:72451032-72451051 None:intergenic 45.0%
! GTATTGGAGGAGGATTTTGG+AGG + chr3_2:72451057-72451076 Msa0422920:intron 45.0%
TTGGGAGGTGGGAAATATAG+GGG - chr3_2:72451217-72451236 None:intergenic 45.0%
! CTTTGGGAGGTGGGAAATAT+AGG - chr3_2:72451219-72451238 None:intergenic 45.0%
TTTGGGAGTTCGAACAGAAG+GGG - chr3_2:72451246-72451265 None:intergenic 45.0%
GTTTGGGAGTTCGAACAGAA+GGG - chr3_2:72451247-72451266 None:intergenic 45.0%
TGTTTGGGAGTTCGAACAGA+AGG - chr3_2:72451248-72451267 None:intergenic 45.0%
GAACTCCCAAACAAAGCCTT+GGG + chr3_2:72451255-72451274 Msa0422920:intron 45.0%
AACTCCCAAACAAAGCCTTG+GGG + chr3_2:72451256-72451275 Msa0422920:intron 45.0%
!! TAGACCCCAAGGCTTTGTTT+GGG - chr3_2:72451263-72451282 None:intergenic 45.0%
!! ATAGACCCCAAGGCTTTGTT+TGG - chr3_2:72451264-72451283 None:intergenic 45.0%
AAAGCCTTGGGGTCTATCTT+TGG + chr3_2:72451267-72451286 Msa0422920:intron 45.0%
AAGCCTTGGGGTCTATCTTT+GGG + chr3_2:72451268-72451287 Msa0422920:intron 45.0%
AAACCCAAAGATAGACCCCA+AGG - chr3_2:72451274-72451293 None:intergenic 45.0%
TGAAGCTAAGTTTGGAGGGA+GGG - chr3_2:72451525-72451544 None:intergenic 45.0%
TTGAAGCTAAGTTTGGAGGG+AGG - chr3_2:72451526-72451545 None:intergenic 45.0%
TGAACGAGTGCAAGTGCAAA+AGG - chr3_2:72451552-72451571 None:intergenic 45.0%
TGAACGGGTGCAAGTACAAA+AGG - chr3_2:72451629-72451648 None:intergenic 45.0%
TTGTACTTGCACCCGTTCAT+AGG + chr3_2:72451630-72451649 Msa0422920:intron 45.0%
TGTTCAGTATGCTTGTAGCG+TGG + chr3_2:72453010-72453029 Msa0422920:intron 45.0%
ATAGGGCAAGGTCTTGAAGT+AGG - chr3_2:72453158-72453177 None:intergenic 45.0%
! ACCGTAACTCTTTTGTGTGG+GGG + chr3_2:72453249-72453268 Msa0422920:intron 45.0%
CTGCTAATTAAGAAGGACCG+AGG + chr3_2:72453351-72453370 Msa0422920:CDS 45.0%
TAATTAAGAAGGACCGAGGG+AGG + chr3_2:72453355-72453374 Msa0422920:CDS 45.0%
!! TAAGCCTTTGGTCTTGCCTT+GGG - chr3_2:72453390-72453409 None:intergenic 45.0%
!! ATAAGCCTTTGGTCTTGCCT+TGG - chr3_2:72453391-72453410 None:intergenic 45.0%
AAGGCAAGACCAAAGGCTTA+TGG + chr3_2:72453390-72453409 Msa0422920:CDS 45.0%
TTGCGGTTCAGAAAATGAGC+AGG + chr3_2:72453503-72453522 Msa0422920:CDS 45.0%
CAGCTAGGCAGTGATAATAC+CGG + chr3_2:72453564-72453583 Msa0422920:CDS 45.0%
GGCTTCATCATCATCACTTC+CGG - chr3_2:72453586-72453605 None:intergenic 45.0%
GATGAAGCCGAAGATCATGA+TGG + chr3_2:72453597-72453616 Msa0422920:CDS 45.0%
!! TGAAGAGGATGGTGGGATTT+CGG + chr3_2:72453713-72453732 Msa0422920:CDS 45.0%
TTTCCAATGCAGACTTCCAG+AGG + chr3_2:72453931-72453950 Msa0422920:CDS 45.0%
! CCTTTAGTTCCTTGATCCTC+TGG - chr3_2:72453950-72453969 None:intergenic 45.0%
CCAGAGGATCAAGGAACTAA+AGG + chr3_2:72453947-72453966 Msa0422920:CDS 45.0%
! CTAGGTTTAAAGCGAGTGGA+TGG + chr3_2:72454132-72454151 Msa0422920:CDS 45.0%
AGCGGCTGTCAAACAGAAAA+AGG + chr3_2:72454368-72454387 Msa0422920:CDS 45.0%
GGTCTGGTAAACAACAACGT+GGG + chr3_2:72454908-72454927 Msa0422920:CDS 45.0%
! AGCTTCTCGTTGATTGCAGT+TGG - chr3_2:72455046-72455065 None:intergenic 45.0%
!!! TTTTTTTTTTTTTAAATATC+AGG + chr3_2:72449724-72449743 Msa0422920:intron 5.0%
!!! TTTTTTATATTAAATTTTGA+TGG + chr3_2:72455080-72455099 Msa0422920:three_prime_UTR 5.0%
! TGATGGGAGGCTGAGCTTTT+CGG - chr3_2:72448715-72448734 None:intergenic 50.0%
GTTCGGATTCGTAGCCTTCA+GGG - chr3_2:72448761-72448780 None:intergenic 50.0%
AGTTCGGATTCGTAGCCTTC+AGG - chr3_2:72448762-72448781 None:intergenic 50.0%
! GGCTTTATCGGCGAGATCTT+TGG - chr3_2:72448889-72448908 None:intergenic 50.0%
AAAAGGAGGTGAGGTGAGAG+AGG - chr3_2:72448917-72448936 None:intergenic 50.0%
GTTGAGGGTAAAAGGAGGTG+AGG - chr3_2:72448926-72448945 None:intergenic 50.0%
!! GAGGTGTTGAGGGTAAAAGG+AGG - chr3_2:72448931-72448950 None:intergenic 50.0%
!! GGGAATTCAGAGAGGTGTTG+AGG - chr3_2:72448942-72448961 None:intergenic 50.0%
AGCTTCACAAGAGACGGACA+TGG + chr3_2:72449590-72449609 Msa0422920:CDS 50.0%
CTTCCTTCCATCCATCGTCA+AGG + chr3_2:72449647-72449666 Msa0422920:CDS 50.0%
GTTCTTGAGGGGATTGACAG+AGG + chr3_2:72450786-72450805 Msa0422920:intron 50.0%
TGAGTTTGGAGGGAAAGGCA+GGG + chr3_2:72450924-72450943 Msa0422920:intron 50.0%
GGAGCAGATGGAAGAAGTTG+AGG + chr3_2:72450969-72450988 Msa0422920:intron 50.0%
CGAACTCCCAAACAAAGCCT+TGG + chr3_2:72451254-72451273 Msa0422920:intron 50.0%
GCACCCGTTCATAGGAGATA+AGG + chr3_2:72451638-72451657 Msa0422920:intron 50.0%
TGCTAGCTGATGTACCTTGG+TGG - chr3_2:72451770-72451789 None:intergenic 50.0%
! AAGAGCGCGGATCATCTGAA+AGG + chr3_2:72451841-72451860 Msa0422920:CDS 50.0%
! TAACATCTCGTTGATGGGGC+TGG - chr3_2:72452374-72452393 None:intergenic 50.0%
TTTGATTGCAGCAGCGGTTC+AGG + chr3_2:72452398-72452417 Msa0422920:CDS 50.0%
GGTTCAGGCTTGCCATGATA+TGG + chr3_2:72452413-72452432 Msa0422920:CDS 50.0%
AACAAGGGCTCAACTGCATC+AGG - chr3_2:72452594-72452613 None:intergenic 50.0%
TAAAGACCTCTGGACGTGAG+CGG - chr3_2:72452647-72452666 None:intergenic 50.0%
TACTTACCAGTGGCATACGC+AGG - chr3_2:72452806-72452825 None:intergenic 50.0%
TATGCTTGTAGCGTGGTCCT+TGG + chr3_2:72453017-72453036 Msa0422920:intron 50.0%
TTGTAGCGTGGTCCTTGGAA+TGG + chr3_2:72453022-72453041 Msa0422920:intron 50.0%
TGTAGCGTGGTCCTTGGAAT+GGG + chr3_2:72453023-72453042 Msa0422920:intron 50.0%
CCCCCCACACAAAAGAGTTA+CGG - chr3_2:72453253-72453272 None:intergenic 50.0%
! CCGTAACTCTTTTGTGTGGG+GGG + chr3_2:72453250-72453269 Msa0422920:intron 50.0%
!! AAGCCTTTGGTCTTGCCTTG+GGG - chr3_2:72453389-72453408 None:intergenic 50.0%
ATCTGCAACAACTCAGCACC+AGG - chr3_2:72453441-72453460 None:intergenic 50.0%
TCTGACGATGACAACCAGCT+AGG + chr3_2:72453549-72453568 Msa0422920:CDS 50.0%
CGGTATTATCACTGCCTAGC+TGG - chr3_2:72453566-72453585 None:intergenic 50.0%
CAGTGAAGAGGCTGATGAAG+AGG + chr3_2:72453698-72453717 Msa0422920:CDS 50.0%
GAAGAGGCTGATGAAGAGGA+TGG + chr3_2:72453702-72453721 Msa0422920:CDS 50.0%
AGGCTGATGAAGAGGATGGT+GGG + chr3_2:72453706-72453725 Msa0422920:CDS 50.0%
GGTGGGATTTCGGAACATGA+AGG + chr3_2:72453723-72453742 Msa0422920:CDS 50.0%
!! CAGCTGCTGATTCAAGTCTC+CGG + chr3_2:72453844-72453863 Msa0422920:CDS 50.0%
!! AGCTGCTGATTCAAGTCTCC+GGG + chr3_2:72453845-72453864 Msa0422920:CDS 50.0%
!! TCTCCGGGCTTTGAAGAAGT+TGG + chr3_2:72453860-72453879 Msa0422920:CDS 50.0%
CTGCCAACTTCTTCAAAGCC+CGG - chr3_2:72453866-72453885 None:intergenic 50.0%
!! GGGCTTTGAAGAAGTTGGCA+GGG + chr3_2:72453865-72453884 Msa0422920:CDS 50.0%
GAAGTTGGCAGGGACAACAA+TGG + chr3_2:72453875-72453894 Msa0422920:CDS 50.0%
GCCCTGCCAGAAAATGAAGA+TGG + chr3_2:72453903-72453922 Msa0422920:CDS 50.0%
! GATCCTCTGGAAGTCTGCAT+TGG - chr3_2:72453937-72453956 None:intergenic 50.0%
TGCAGACTTCCAGAGGATCA+AGG + chr3_2:72453938-72453957 Msa0422920:CDS 50.0%
AGAACTGCATTAGCGCAGCA+CGG + chr3_2:72454066-72454085 Msa0422920:CDS 50.0%
GCTTAACAAGGAGGAGAGGT+TGG + chr3_2:72454299-72454318 Msa0422920:CDS 50.0%
AGGTTGGCAATGGTTAGAGC+AGG + chr3_2:72454315-72454334 Msa0422920:CDS 50.0%
GGTTGGCAATGGTTAGAGCA+GGG + chr3_2:72454316-72454335 Msa0422920:CDS 50.0%
AGGATAAAACAGCAGCGGTC+TGG + chr3_2:72454892-72454911 Msa0422920:CDS 50.0%
CGGTCTGGTAAACAACAACG+TGG + chr3_2:72454907-72454926 Msa0422920:CDS 50.0%
CTGGTAAACAACAACGTGGG+AGG + chr3_2:72454911-72454930 Msa0422920:CDS 50.0%
! TGGGAGGAAAGCGTGGAAAT+AGG + chr3_2:72454927-72454946 Msa0422920:CDS 50.0%
! GGGAGGAAAGCGTGGAAATA+GGG + chr3_2:72454928-72454947 Msa0422920:CDS 50.0%
!! GTGGTGGTGGCTACGTTTCA+TGG - chr3_2:72448646-72448665 None:intergenic 55.0%
GTCGTTGGAGATGCCGGAAA+TGG - chr3_2:72448856-72448875 None:intergenic 55.0%
CGAGATCTTTGGCGACAGTG+GGG - chr3_2:72448878-72448897 None:intergenic 55.0%
GCGAGATCTTTGGCGACAGT+GGG - chr3_2:72448879-72448898 None:intergenic 55.0%
GGTGAGGTGAGAGAGGAACA+TGG - chr3_2:72448910-72448929 None:intergenic 55.0%
GCTGCTCGAACACTTCCTTC+TGG + chr3_2:72448990-72449009 Msa0422920:CDS 55.0%
AGGATGAAGACCGGGCAAAG+AGG + chr3_2:72449548-72449567 Msa0422920:CDS 55.0%
GGATGAAGACCGGGCAAAGA+GGG + chr3_2:72449549-72449568 Msa0422920:CDS 55.0%
AGTTCAGAAGAGGGTGGGGT+TGG + chr3_2:72450080-72450099 Msa0422920:intron 55.0%
GTTCAGAAGAGGGTGGGGTT+GGG + chr3_2:72450081-72450100 Msa0422920:intron 55.0%
! GCTGAGGGCATGTTAGTTGG+AGG + chr3_2:72450673-72450692 Msa0422920:intron 55.0%
GTGAGTTTGGAGGGAAAGGC+AGG + chr3_2:72450923-72450942 Msa0422920:intron 55.0%
GAGTTTGGAGGGAAAGGCAG+GGG + chr3_2:72450925-72450944 Msa0422920:intron 55.0%
GGAAAGGCAGGGGATAGCTT+TGG + chr3_2:72450935-72450954 Msa0422920:intron 55.0%
GAACAGAAGGGGAGGGCTTT+GGG - chr3_2:72451235-72451254 None:intergenic 55.0%
GGAGTTCGAACAGAAGGGGA+GGG - chr3_2:72451242-72451261 None:intergenic 55.0%
GATATGCCTGCGTATGCCAC+TGG + chr3_2:72452797-72452816 Msa0422920:CDS 55.0%
CTTGCGCATCCAACAAGGGT+TGG + chr3_2:72452889-72452908 Msa0422920:intron 55.0%
TGACCCCAAGGCAAGACCAA+AGG + chr3_2:72453383-72453402 Msa0422920:CDS 55.0%
AATGTTGCGGCTGACGTTCC+TGG + chr3_2:72453420-72453439 Msa0422920:CDS 55.0%
GAGGCTGATGAAGAGGATGG+TGG + chr3_2:72453705-72453724 Msa0422920:CDS 55.0%
!! CGGGCTTTGAAGAAGTTGGC+AGG + chr3_2:72453864-72453883 Msa0422920:CDS 55.0%
GAACTGCATTAGCGCAGCAC+GGG + chr3_2:72454067-72454086 Msa0422920:CDS 55.0%
CAAGGAGGAGAGGTTGGCAA+TGG + chr3_2:72454305-72454324 Msa0422920:CDS 55.0%
TGGCAATGGTTAGAGCAGGG+AGG + chr3_2:72454319-72454338 Msa0422920:CDS 55.0%
GGCAATGGTTAGAGCAGGGA+GGG + chr3_2:72454320-72454339 Msa0422920:CDS 55.0%
AATGGTTAGAGCAGGGAGGG+AGG + chr3_2:72454323-72454342 Msa0422920:CDS 55.0%
AGGACAGTACCATGCTCGAG+CGG + chr3_2:72454350-72454369 Msa0422920:CDS 55.0%
AACAACGTGGGAGGAAAGCG+TGG + chr3_2:72454920-72454939 Msa0422920:CDS 55.0%
!! ACGGAGGCATTTCTCCCCTC+CGG + chr3_2:72448681-72448700 Msa0422920:CDS 60.0%
AGTGGGGTCGTTGGAGATGC+CGG - chr3_2:72448862-72448881 None:intergenic 60.0%
TTTGGCGACAGTGGGGTCGT+TGG - chr3_2:72448871-72448890 None:intergenic 60.0%
GGCGAGATCTTTGGCGACAG+TGG - chr3_2:72448880-72448899 None:intergenic 60.0%
TCACAAGCGCCCTCTTTGCC+CGG - chr3_2:72449561-72449580 None:intergenic 60.0%
! GGGGCTGAGGGCATGTTAGT+TGG + chr3_2:72450670-72450689 Msa0422920:intron 60.0%
CGAACAGAAGGGGAGGGCTT+TGG - chr3_2:72451236-72451255 None:intergenic 60.0%
GGGAGTTCGAACAGAAGGGG+AGG - chr3_2:72451243-72451262 None:intergenic 60.0%
TGGAGGGAGGGAGTAGAGCA+GGG - chr3_2:72451513-72451532 None:intergenic 60.0%
TTGGAGGGAGGGAGTAGAGC+AGG - chr3_2:72451514-72451533 None:intergenic 60.0%
ACATGACCGCTCACGTCCAG+AGG + chr3_2:72452638-72452657 Msa0422920:CDS 60.0%
GGTCTTGCCTTGGGGTCAGT+AGG - chr3_2:72453381-72453400 None:intergenic 60.0%
AGAGCAGGGAGGGAGGAAAG+AGG + chr3_2:72454330-72454349 Msa0422920:CDS 60.0%
GTTTGACAGCCGCTCGAGCA+TGG - chr3_2:72454362-72454381 None:intergenic 60.0%
GAAATGCCTCCGTCGCGGCA+TGG - chr3_2:72448674-72448693 None:intergenic 65.0%
GGGGAGAAATGCCTCCGTCG+CGG - chr3_2:72448679-72448698 None:intergenic 65.0%
!! AGGGGAGGGCTTTGGGAGGT+GGG - chr3_2:72451228-72451247 None:intergenic 65.0%
!! AAGGGGAGGGCTTTGGGAGG+TGG - chr3_2:72451229-72451248 None:intergenic 65.0%
!! CAGAAGGGGAGGGCTTTGGG+AGG - chr3_2:72451232-72451251 None:intergenic 65.0%
TGGGGTCAGTAGGCCTCCCT+CGG - chr3_2:72453371-72453390 None:intergenic 65.0%
AGGGAGGCCTACTGACCCCA+AGG + chr3_2:72453371-72453390 Msa0422920:CDS 65.0%
!! CGGCATGGCTCTGGTGGTGG+TGG - chr3_2:72448659-72448678 None:intergenic 70.0%
!! TCGCGGCATGGCTCTGGTGG+TGG - chr3_2:72448662-72448681 None:intergenic 70.0%
CCACCAGAGCCATGCCGCGA+CGG + chr3_2:72448662-72448681 Msa0422920:CDS 70.0%
!! CCGTCGCGGCATGGCTCTGG+TGG - chr3_2:72448665-72448684 None:intergenic 75.0%
CCTCCGTCGCGGCATGGCTC+TGG - chr3_2:72448668-72448687 None:intergenic 75.0%
CCAGAGCCATGCCGCGACGG+AGG + chr3_2:72448665-72448684 Msa0422920:CDS 75.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 72448589 72455187 72448589 ID=Msa0422920;Name=Msa0422920
chr3_2 mRNA 72448589 72455187 72448589 ID=Msa0422920-mRNA-1;Parent=Msa0422920;Name=Msa0422920-mRNA-1;_AED=0.13;_eAED=0.13;_QI=56|1|1|1|1|1|15|239|816
chr3_2 exon 72448589 72449061 72448589 ID=Msa0422920-mRNA-1:exon:17883;Parent=Msa0422920-mRNA-1
chr3_2 exon 72449161 72449337 72449161 ID=Msa0422920-mRNA-1:exon:17884;Parent=Msa0422920-mRNA-1
chr3_2 exon 72449544 72449668 72449544 ID=Msa0422920-mRNA-1:exon:17885;Parent=Msa0422920-mRNA-1
chr3_2 exon 72449776 72449911 72449776 ID=Msa0422920-mRNA-1:exon:17886;Parent=Msa0422920-mRNA-1
chr3_2 exon 72451762 72451911 72451762 ID=Msa0422920-mRNA-1:exon:17887;Parent=Msa0422920-mRNA-1
chr3_2 exon 72452005 72452058 72452005 ID=Msa0422920-mRNA-1:exon:17888;Parent=Msa0422920-mRNA-1
chr3_2 exon 72452195 72452290 72452195 ID=Msa0422920-mRNA-1:exon:17889;Parent=Msa0422920-mRNA-1
chr3_2 exon 72452375 72452434 72452375 ID=Msa0422920-mRNA-1:exon:17890;Parent=Msa0422920-mRNA-1
chr3_2 exon 72452585 72452659 72452585 ID=Msa0422920-mRNA-1:exon:17891;Parent=Msa0422920-mRNA-1
chr3_2 exon 72452765 72452818 72452765 ID=Msa0422920-mRNA-1:exon:17892;Parent=Msa0422920-mRNA-1
chr3_2 exon 72453141 72453242 72453141 ID=Msa0422920-mRNA-1:exon:17893;Parent=Msa0422920-mRNA-1
chr3_2 exon 72453339 72453968 72453339 ID=Msa0422920-mRNA-1:exon:17894;Parent=Msa0422920-mRNA-1
chr3_2 exon 72454051 72454167 72454051 ID=Msa0422920-mRNA-1:exon:17895;Parent=Msa0422920-mRNA-1
chr3_2 exon 72454282 72454389 72454282 ID=Msa0422920-mRNA-1:exon:17896;Parent=Msa0422920-mRNA-1
chr3_2 exon 72454799 72455187 72454799 ID=Msa0422920-mRNA-1:exon:17897;Parent=Msa0422920-mRNA-1
chr3_2 five_prime_UTR 72448589 72448644 72448589 ID=Msa0422920-mRNA-1:five_prime_utr;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72448645 72449061 72448645 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72449161 72449337 72449161 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72449544 72449668 72449544 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72449776 72449911 72449776 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72451762 72451911 72451762 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72452005 72452058 72452005 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72452195 72452290 72452195 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72452375 72452434 72452375 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72452585 72452659 72452585 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72452765 72452818 72452765 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72453141 72453242 72453141 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72453339 72453968 72453339 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72454051 72454167 72454051 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72454282 72454389 72454282 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 CDS 72454799 72454948 72454799 ID=Msa0422920-mRNA-1:cds;Parent=Msa0422920-mRNA-1
chr3_2 three_prime_UTR 72454949 72455187 72454949 ID=Msa0422920-mRNA-1:three_prime_utr;Parent=Msa0422920-mRNA-1
Gene Sequence

>Msa0422920

ATGAAACGTAGCCACCACCACCAGAGCCATGCCGCGACGGAGGCATTTCTCCCCTCCGGTCTAAAATCCGAAAAGCTCAGCCTCCCATCACTACAATCAAAGATGAAATGCGACCCTGAAGGCTACGAATCCGAACTCCTCTTAATCCGCAGTCAATTCAATTCCTCCCTTGAACTCTTCCAACAACAATCCGCCATGAACTTCACTTCCATTTCCGGCATCTCCAACGACCCCACTGTCGCCAAAGATCTCGCCGATAAAGCCATGTTCCTCTCTCACCTCACCTCCTTTTACCCTCAACACCTCTCTGAATTCCCTAACAAACTCGCTGAGTTGCTTCGTTGTGCTGCTCGAACACTTCCTTCTGGACTTCGTAACGATTTAGCAAATTCTCTTATACTACTTGTTAATCGTGAGATTGTTAGCATTAAAGATACACTTTCGTTGTTTATGGAGCTTCAAACATTAGGTGATAAAAAGCTGAGGGAGTTGACGTTTGCACACGTTGTTAAAAGCATAAAACGTATGAACCAAAAGCATAAGGATGAAGCCAAAAACCGTGCACTTCAGAACATTCTTTTTGTCATGTTGCAGCAAGAGGATGAAGACCGGGCAAAGAGGGCGCTTGTGACACTATGTGAGCTTCACAAGAGACGGACATGGTTTGATGAGAGAACAGCAAATGCAATTTGCACTGCTTCCTTCCATCCATCGTCAAGAATCATGATATCAACATTATGCTTTCTGCTTGATTATGAGAAGATTGAAAACTACCAAGATAGTGATGATGAAAGCAGTGACGAGGAAACAACCGAATCACCTCAAGTTATTCTTAGAAGGGAGACGGTTTATAAGGCAAGCCACCAAGGTACATCAGCTAGCAAAAAGAAAAAGAAAAGGCAATTAGACCGCATAATACGTAACATGAAAAAGAAAGAGCGCGGATCATCTGAAAGGAAGAATAACATCTATTACTCACCACTCAACCATCTTAAAGATCCACAGGGTTTTGTGGAGAAGCTGTTTTCACGTCTGCAGAAATGCAATGAGCGATTTGAGGTCAAGATGATGATGTTGAAAGTGATAGCTCGAACAATTGGGCTTCACCAGTTAATGTTGTTAAACTTTTACCCTTATCTTCAGAAATATATCCAGCCCCATCAACGAGATGTTACAAATTTGATTGCAGCAGCGGTTCAGGCTTGCCATGATATGGTTCCTCCTGATGCAGTTGAGCCCTTGTTTAAACAAATTGTAAATCAATTTGTACATGACCGCTCACGTCCAGAGGCTATCACTGTTGGAATAAATGCAGTCAGGGAGATATGCCTGCGTATGCCACTGTTAATGAATGAAGACCTACTTCAAGACCTTGCCCTATATAAGAAGTCACATGAGAAAGGAGTTTCAATAGCAGCTCGATCTCTCATTACATTATTCCGAGAGGTTTGCCCTTCACTGCTAATTAAGAAGGACCGAGGGAGGCCTACTGACCCCAAGGCAAGACCAAAGGCTTATGGAGAAGTCAATGTTGCGGCTGACGTTCCTGGTGCTGAGTTGTTGCAGATTATTGATGATGATGTTGAGCAGGAGAGTTCTCATTCTGATGATTGCGGTTCAGAAAATGAGCAGGAAGATGATCAGGTAAGTTTGAACTCTGACGATGACAACCAGCTAGGCAGTGATAATACCGGAAGTGATGATGATGAAGCCGAAGATCATGATGGTGAATCAGACGATGAAAACGATAGAAGTTCTGATTACGAAACCAGTGGTGATGATGCTGATAATGTTGATCTAGAAGACAGTGAAGAGGCTGATGAAGAGGATGGTGGGATTTCGGAACATGAAGGAGATGGTGATCTGCATATTCTTGGAAGTGTGGATACAAAAACTACGTTAAAAGACTCAGCAAAAAAGAGGAAGTTTAGCGATTTCAACGATCAACTTACAGCTGCTGATTCAAGTCTCCGGGCTTTGAAGAAGTTGGCAGGGACAACAATGGAGAATGCCCTGCCAGAAAATGAAGATGGAATTCTTTCCAATGCAGACTTCCAGAGGATCAAGGAACTAAAGGCCAAAAACGAAGCAAGAACTGCATTAGCGCAGCACGGGCTTTTAAAGTCATCAACAAATAAGATTCCAAGCTCTGATCAACTAGGTTTAAAGCGAGTGGATGGTTCCATGCTTGAAGCTCATGTAAAGAAAAAGCTTAACAAGGAGGAGAGGTTGGCAATGGTTAGAGCAGGGAGGGAGGAAAGAGGACAGTACCATGCTCGAGCGGCTGTCAAACAGAAAAAGACGGGTGGTCTAAGTAACAAGCAAAAGGAACACAAGAAACAAATGCCGTTAGTTGCAAAGAGAAAGAAGGTGGCAAGAACTAAGATAGAGAAAAGGATAAAACAGCAGCGGTCTGGTAAACAACAACGTGGGAGGAAAGCGTGGAAATAG

Protein sequence

>Msa0422920

MKRSHHHQSHAATEAFLPSGLKSEKLSLPSLQSKMKCDPEGYESELLLIRSQFNSSLELFQQQSAMNFTSISGISNDPTVAKDLADKAMFLSHLTSFYPQHLSEFPNKLAELLRCAARTLPSGLRNDLANSLILLVNREIVSIKDTLSLFMELQTLGDKKLRELTFAHVVKSIKRMNQKHKDEAKNRALQNILFVMLQQEDEDRAKRALVTLCELHKRRTWFDERTANAICTASFHPSSRIMISTLCFLLDYEKIENYQDSDDESSDEETTESPQVILRRETVYKASHQGTSASKKKKKRQLDRIIRNMKKKERGSSERKNNIYYSPLNHLKDPQGFVEKLFSRLQKCNERFEVKMMMLKVIARTIGLHQLMLLNFYPYLQKYIQPHQRDVTNLIAAAVQACHDMVPPDAVEPLFKQIVNQFVHDRSRPEAITVGINAVREICLRMPLLMNEDLLQDLALYKKSHEKGVSIAARSLITLFREVCPSLLIKKDRGRPTDPKARPKAYGEVNVAADVPGAELLQIIDDDVEQESSHSDDCGSENEQEDDQVSLNSDDDNQLGSDNTGSDDDEAEDHDGESDDENDRSSDYETSGDDADNVDLEDSEEADEEDGGISEHEGDGDLHILGSVDTKTTLKDSAKKRKFSDFNDQLTAADSSLRALKKLAGTTMENALPENEDGILSNADFQRIKELKAKNEARTALAQHGLLKSSTNKIPSSDQLGLKRVDGSMLEAHVKKKLNKEERLAMVRAGREERGQYHARAAVKQKKTGGLSNKQKEHKKQMPLVAKRKKVARTKIEKRIKQQRSGKQQRGRKAWK*