AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1133400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133400 MtrunA17_Chr6g0481541 98.696 230 3 0 1 230 1 230 5.97e-163 449
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1133400 AT5G37475.3 64.502 231 72 6 3 230 2 225 6.59e-84 249
Msa1133400 AT5G37475.2 64.502 231 72 6 3 230 2 225 6.59e-84 249
Msa1133400 AT5G37475.1 64.502 231 72 6 3 230 2 225 6.59e-84 249
Msa1133400 AT1G66070.2 65.086 232 70 7 3 230 2 226 4.92e-83 247
Msa1133400 AT1G66070.1 65.086 232 70 7 3 230 2 226 4.92e-83 247

Find 77 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGAGCCACCTAAACTTAAA+TGG 0.183700 7_3:+86880066 Msa1133400:CDS
GGCATAAACCTGTTCAAAAT+TGG 0.184129 7_3:+86882591 Msa1133400:three_prime_UTR
ACTGATGCACACTCTCTTAT+TGG 0.212573 7_3:-86882637 None:intergenic
AACAACCATCCTTAACAAAA+AGG 0.223564 7_3:-86882827 None:intergenic
GCAGAAAAGTTATCATTATA+TGG 0.227051 7_3:+86882149 Msa1133400:intron
TCTTCATGCAGTTGGTTATC+AGG 0.237781 7_3:+86878809 Msa1133400:intron
TCATACCGAACACTTCAATT+TGG 0.241374 7_3:-86882967 None:intergenic
TCATCTTCCCATTTAAGTTT+AGG 0.277379 7_3:-86880074 None:intergenic
GAAATCTGAGAGTGATTTCT+TGG 0.281694 7_3:+86882009 Msa1133400:CDS
GGAGTGAGATTTGGTGTTCT+AGG 0.308982 7_3:-86878179 None:intergenic
TACAGAAGACGCAATATCTT+TGG 0.316638 7_3:-86882226 None:intergenic
ATGCAAATCAATACCTTTGT+TGG 0.335246 7_3:-86880820 None:intergenic
ATATCGATGACTTCTCTAAA+AGG 0.352339 7_3:+86882195 Msa1133400:CDS
AAGAAATCACTCTCAGATTT+CGG 0.374125 7_3:-86882007 None:intergenic
ACCCGCCGGTTACAAATTAG+AGG 0.379828 7_3:+86882864 Msa1133400:three_prime_UTR
CTGTTTCTACATTGGATGTT+GGG 0.386672 7_3:+86882556 Msa1133400:three_prime_UTR
AAAGAACTTTCCAAGTATAA+TGG 0.393365 7_3:-86882692 None:intergenic
TGGCGGCCGGCGAGGAAATC+CGG 0.393916 7_3:-86878277 None:intergenic
TCTCTTATTGGACAAAATAC+AGG 0.395500 7_3:-86882625 None:intergenic
AGTTGAAGAAGCAGATTATA+AGG 0.395629 7_3:+86881928 Msa1133400:CDS
GACGACAATGGAGGATGATT+GGG 0.396252 7_3:+86878870 Msa1133400:exon
AAGGCCACTAAGGAATTGTT+TGG 0.397033 7_3:+86881947 Msa1133400:CDS
CTCATGTAACTTAAGATCAA+TGG 0.397639 7_3:-86880048 None:intergenic
TGACGACAATGGAGGATGAT+TGG 0.406272 7_3:+86878869 Msa1133400:exon
TGTTTCAGAGGAAGAGCAAT+TGG 0.407424 7_3:+86880022 Msa1133400:intron
GGAAATCCGGCGGAGATAAC+CGG 0.424941 7_3:-86878264 None:intergenic
CCGAACACTTCAATTTGGAT+TGG 0.435850 7_3:-86882962 None:intergenic
GGAAGAACCACTGGATCCTC+TGG 0.438453 7_3:+86880784 Msa1133400:CDS
GCGGCTACAGGAGTGAGATT+TGG 0.447437 7_3:-86878188 None:intergenic
GCAGCAACAAAATCTTCATC+AGG 0.455398 7_3:-86882446 None:intergenic
ATCTCTCCGGTTATCTCCGC+CGG 0.460002 7_3:+86878258 Msa1133400:five_prime_UTR
TGCTGATCGATATGATGCTT+TGG 0.462854 7_3:+86882466 Msa1133400:CDS
TGAGCCACCTAAACTTAAAT+GGG 0.467131 7_3:+86880067 Msa1133400:CDS
ACTGTTTCTACATTGGATGT+TGG 0.467650 7_3:+86882555 Msa1133400:three_prime_UTR
CAGAAAAGTTATCATTATAT+GGG 0.471042 7_3:+86882150 Msa1133400:intron
CCAATCCAAATTGAAGTGTT+CGG 0.473580 7_3:+86882962 Msa1133400:three_prime_UTR
GAGTGAGATTTGGTGTTCTA+GGG 0.475160 7_3:-86878178 None:intergenic
CAGATTGTCCTTACAGGAGC+GGG 0.475362 7_3:-86880146 None:intergenic
TCAATCCTCTAATTTGTAAC+CGG 0.476749 7_3:-86882869 None:intergenic
TCATGTAACTTAAGATCAAT+GGG 0.477397 7_3:-86880047 None:intergenic
ACCACCAAACAATTCCTTAG+TGG 0.482673 7_3:-86881951 None:intergenic
TCTCCGCCGGATTTCCTCGC+CGG 0.483784 7_3:+86878271 Msa1133400:five_prime_UTR
AGATTCAACTGTTTCTACAT+TGG 0.503472 7_3:+86882548 Msa1133400:three_prime_UTR
TCTTAACTGAATAATCTGAA+TGG 0.511254 7_3:-86882526 None:intergenic
AGCAGATTATAAGGCCACTA+AGG 0.514749 7_3:+86881937 Msa1133400:CDS
TTCTAGCTGATTGTGGCGGC+CGG 0.515281 7_3:-86878290 None:intergenic
AGAAACGCAACAGCGGCTAC+AGG 0.521525 7_3:-86878200 None:intergenic
AAAAGAAAAGGAAGAACCAC+TGG 0.521558 7_3:+86880775 Msa1133400:CDS
ATTTCGGTATAAAAGTATCA+AGG 0.522172 7_3:-86881991 None:intergenic
TCTTCCCATTTAAGTTTAGG+TGG 0.522816 7_3:-86880071 None:intergenic
TCTCACTCAATTCATCTCTC+CGG 0.523375 7_3:+86878245 Msa1133400:five_prime_UTR
TCCTCTAATTTGTAACCGGC+GGG 0.526787 7_3:-86882865 None:intergenic
TTTGAACAGGTTTATGCCGA+AGG 0.532762 7_3:-86882586 None:intergenic
AAGATGATGTGAAGGACTCA+TGG 0.536684 7_3:+86880108 Msa1133400:CDS
ACTAAGGAATTGTTTGGTGG+TGG 0.543912 7_3:+86881953 Msa1133400:CDS
GATGTTGGGACAAGACCCTT+CGG 0.546611 7_3:+86882570 Msa1133400:three_prime_UTR
GCCACTAAGGAATTGTTTGG+TGG 0.550879 7_3:+86881950 Msa1133400:CDS
GCAGAGAAAGAAGCCAATGC+TGG 0.560128 7_3:+86882276 Msa1133400:CDS
ATCCTCTAATTTGTAACCGG+CGG 0.565953 7_3:-86882866 None:intergenic
GCTGATTGTGGCGGCCGGCG+AGG 0.583361 7_3:-86878285 None:intergenic
ACGGAGTTTCTAGCTGATTG+TGG 0.587264 7_3:-86878297 None:intergenic
CTCTTATTGGACAAAATACA+GGG 0.588960 7_3:-86882624 None:intergenic
TTGAACAGGTTTATGCCGAA+GGG 0.595626 7_3:-86882585 None:intergenic
TCAGATTGTCCTTACAGGAG+CGG 0.604509 7_3:-86880147 None:intergenic
AGCTAGAAACTCCGTCCACA+AGG 0.611517 7_3:+86878305 Msa1133400:five_prime_UTR
TTATCACATTTATCACCCGC+CGG 0.618141 7_3:+86882850 Msa1133400:three_prime_UTR
AAAAGGGAATACCTTGTGGA+CGG 0.632514 7_3:-86878316 None:intergenic
ACGACAATGGAGGATGATTG+GGG 0.635958 7_3:+86878871 Msa1133400:exon
TCTTGATCAAGTGACGACAA+TGG 0.639760 7_3:+86878858 Msa1133400:exon
AGATGATGTGAAGGACTCAT+GGG 0.641424 7_3:+86880109 Msa1133400:CDS
CGTGGATGAAGATGATGTGA+AGG 0.652162 7_3:+86880100 Msa1133400:CDS
ATTGAAGAGAAACGCAACAG+CGG 0.657535 7_3:-86878207 None:intergenic
GAGTTTCTAGCTGATTGTGG+CGG 0.677648 7_3:-86878294 None:intergenic
TGATCAAGTGACGACAATGG+AGG 0.677684 7_3:+86878861 Msa1133400:exon
ACAAATTAGAGGATTGACCA+TGG 0.683375 7_3:+86882875 Msa1133400:three_prime_UTR
CGGCCGGCGAGGAAATCCGG+CGG 0.705401 7_3:-86878274 None:intergenic
TAAATGGGAAGATGAAGACG+TGG 0.710584 7_3:+86880082 Msa1133400:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCCATAAAAATAAAATTA+GGG - chr7_3:86878518-86878537 None:intergenic 10.0%
!!! ATATTCAAAAATAAGATTTT+AGG - chr7_3:86878541-86878560 None:intergenic 10.0%
!!! AAAATCTTATTTTTGAATAT+TGG + chr7_3:86878541-86878560 Msa1133400:intron 10.0%
!! CAATCAATAAAATAATAAAA+CGG + chr7_3:86879681-86879700 Msa1133400:intron 10.0%
!!! TCGATTTTTTTCTTAATTTT+TGG + chr7_3:86878342-86878361 Msa1133400:intron 15.0%
!!! TTTTCTTAATTTTTGGATTT+TGG + chr7_3:86878349-86878368 Msa1133400:intron 15.0%
!! GATTCCATAAAAATAAAATT+AGG - chr7_3:86878519-86878538 None:intergenic 15.0%
!! ATTAAGGTAATTAATTGTTA+TGG + chr7_3:86878598-86878617 Msa1133400:intron 15.0%
!!! TGATTCTTTTTAAATTGTAA+TGG + chr7_3:86878674-86878693 Msa1133400:intron 15.0%
!!! GATTCTTTTTAAATTGTAAT+GGG + chr7_3:86878675-86878694 Msa1133400:intron 15.0%
!!! AAATTTTTATAGCATGTTTT+TGG + chr7_3:86878701-86878720 Msa1133400:intron 15.0%
!! TAAATTGTATTATTGTATTC+GGG - chr7_3:86879018-86879037 None:intergenic 15.0%
!! CTAAATTGTATTATTGTATT+CGG - chr7_3:86879019-86879038 None:intergenic 15.0%
!! AAAATATTAAATATGGTATC+TGG - chr7_3:86879571-86879590 None:intergenic 15.0%
!! GCATGATAAAATATTAAATA+TGG - chr7_3:86879578-86879597 None:intergenic 15.0%
!!! CGTTTTATTATTTTATTGAT+TGG - chr7_3:86879683-86879702 None:intergenic 15.0%
!!! AGTTTTAAAATAAAAAATGG+TGG + chr7_3:86880223-86880242 Msa1133400:intron 15.0%
!! ATACTAAATTAGTAATTGTT+AGG - chr7_3:86880484-86880503 None:intergenic 15.0%
!!! TGATTTTATGTGAATTTTTT+TGG + chr7_3:86882496-86882515 Msa1133400:exon 15.0%
!! AGAAAAAAATCGAAGAAAAA+GGG - chr7_3:86878335-86878354 None:intergenic 20.0%
!! AAGAAAAAAATCGAAGAAAA+AGG - chr7_3:86878336-86878355 None:intergenic 20.0%
!! GGATGTTTATGAATTATTAT+TGG + chr7_3:86879639-86879658 Msa1133400:intron 20.0%
!!! ATAACTTTACATAAGTTTTC+AGG - chr7_3:86879732-86879751 None:intergenic 20.0%
!! TAATTTAATGAGTTTCATGA+TGG + chr7_3:86880503-86880522 Msa1133400:intron 20.0%
!! AAACAAGCAATAAGTATTTA+AGG - chr7_3:86880635-86880654 None:intergenic 20.0%
!!! TCTTTTCCTTTTACTAAATT+TGG + chr7_3:86881807-86881826 Msa1133400:intron 20.0%
!! TACAAATAGTTAAAAGGAAA+GGG - chr7_3:86882097-86882116 None:intergenic 20.0%
!! ACATTCTACAAATAGTTAAA+AGG - chr7_3:86882103-86882122 None:intergenic 20.0%
!! CAGAAAAGTTATCATTATAT+GGG + chr7_3:86882150-86882169 Msa1133400:intron 20.0%
!! ATAATAAAAGCAACATAGAA+AGG - chr7_3:86882339-86882358 None:intergenic 20.0%
!!! TTTTTTCTGGTAATTGATAT+TGG + chr7_3:86882910-86882929 Msa1133400:three_prime_UTR 20.0%
!!! TAATTTTTGGATTTTGGCAT+TGG + chr7_3:86878355-86878374 Msa1133400:intron 25.0%
!!! GTGCCCTAATTTTATTTTTA+TGG + chr7_3:86878512-86878531 Msa1133400:intron 25.0%
!!! GTTTTATTTCTTTCAATTCG+CGG + chr7_3:86878756-86878775 Msa1133400:intron 25.0%
! CTTGATCAAGAAAACAAAAA+CGG - chr7_3:86878849-86878868 None:intergenic 25.0%
! ATGTCCCAAATTAAAGAATA+AGG - chr7_3:86878915-86878934 None:intergenic 25.0%
! TGGTTCAATATGATTATGTT+TGG + chr7_3:86879784-86879803 Msa1133400:intron 25.0%
!! ATTGTTAATTTGAGAAATGC+TGG + chr7_3:86879993-86880012 Msa1133400:intron 25.0%
! TCATGTAACTTAAGATCAAT+GGG - chr7_3:86880050-86880069 None:intergenic 25.0%
!! TAAAAGATTTAAAGCAACTG+TGG - chr7_3:86880328-86880347 None:intergenic 25.0%
! CTGAAATTGTTATAGTTCAA+TGG + chr7_3:86880369-86880388 Msa1133400:intron 25.0%
!!! TTAAGGACACAGTTTTTTAA+GGG - chr7_3:86880618-86880637 None:intergenic 25.0%
!!! TTTAAGGACACAGTTTTTTA+AGG - chr7_3:86880619-86880638 None:intergenic 25.0%
! TGATAACAAGTTATCCTAAA+AGG - chr7_3:86880874-86880893 None:intergenic 25.0%
!! CATAATCATATTTTCTTAGC+CGG - chr7_3:86880961-86880980 None:intergenic 25.0%
!! GCTTTTATGTACTTCTTTTA+CGG + chr7_3:86881039-86881058 Msa1133400:intron 25.0%
! TAAATCATAGGATTCAAACA+GGG + chr7_3:86881257-86881276 Msa1133400:intron 25.0%
!!! TTGGTATCGATATATATCTT+AGG + chr7_3:86881442-86881461 Msa1133400:intron 25.0%
!!! TTTTTCTAGCTAAGTAAGAT+TGG - chr7_3:86881496-86881515 None:intergenic 25.0%
!!! TAGACGTTTTAATCATAGAA+AGG - chr7_3:86881690-86881709 None:intergenic 25.0%
! AATAGAGAACAGATATACTT+AGG - chr7_3:86881739-86881758 None:intergenic 25.0%
! CATAGGAAGTAAATTAAATC+AGG - chr7_3:86881901-86881920 None:intergenic 25.0%
!!! ATTTCGGTATAAAAGTATCA+AGG - chr7_3:86881994-86882013 None:intergenic 25.0%
! CTACAAATAGTTAAAAGGAA+AGG - chr7_3:86882098-86882117 None:intergenic 25.0%
! GCAGAAAAGTTATCATTATA+TGG + chr7_3:86882149-86882168 Msa1133400:intron 25.0%
!! TTTGATCTTTTCATTTGCAA+TGG - chr7_3:86882256-86882275 None:intergenic 25.0%
! AAAATTGAAATCAATGGGAA+AGG - chr7_3:86882379-86882398 None:intergenic 25.0%
! GGCAAAAAATTGAAATCAAT+GGG - chr7_3:86882384-86882403 None:intergenic 25.0%
! TCTTAACTGAATAATCTGAA+TGG - chr7_3:86882529-86882548 None:intergenic 25.0%
!! AATTTTGTCACCATTATACT+TGG + chr7_3:86882682-86882701 Msa1133400:three_prime_UTR 25.0%
! AAAGAACTTTCCAAGTATAA+TGG - chr7_3:86882695-86882714 None:intergenic 25.0%
ATACTTTATGTCATCAATCG+CGG - chr7_3:86878413-86878432 None:intergenic 30.0%
GGTGAATTTCACAAAAATCA+CGG - chr7_3:86878465-86878484 None:intergenic 30.0%
GTGTGTTTGTGTGTTTATTA+AGG + chr7_3:86878582-86878601 Msa1133400:intron 30.0%
AATGTTATTCTTCATGCAGT+TGG + chr7_3:86878801-86878820 Msa1133400:intron 30.0%
! TCCGCCTTATTCTTTAATTT+GGG + chr7_3:86878908-86878927 Msa1133400:intron 30.0%
TCCCAAATTAAAGAATAAGG+CGG - chr7_3:86878912-86878931 None:intergenic 30.0%
GGTCTGTTACATAACAAAAA+TGG - chr7_3:86878941-86878960 None:intergenic 30.0%
ATTATTGTATTCGGGTACTT+GGG - chr7_3:86879010-86879029 None:intergenic 30.0%
TATTATTGTATTCGGGTACT+TGG - chr7_3:86879011-86879030 None:intergenic 30.0%
! AGCATTTTCACAAGTTATCA+TGG + chr7_3:86879332-86879351 Msa1133400:intron 30.0%
! AAGCAGCTGAAAACATTTTA+TGG + chr7_3:86879370-86879389 Msa1133400:intron 30.0%
! TTCAAACAGTTGATATGTGT+TGG + chr7_3:86879510-86879529 Msa1133400:intron 30.0%
! TTGACAGTTCATCAACATTT+TGG + chr7_3:86879764-86879783 Msa1133400:intron 30.0%
CTCATGTAACTTAAGATCAA+TGG - chr7_3:86880051-86880070 None:intergenic 30.0%
! TCATCTTCCCATTTAAGTTT+AGG - chr7_3:86880077-86880096 None:intergenic 30.0%
!!! GTTTTTTAAGGGTGTATCTA+AGG - chr7_3:86880607-86880626 None:intergenic 30.0%
!!! TTTTCAGTAGCTTTTTCAGA+AGG - chr7_3:86880731-86880750 None:intergenic 30.0%
TGAAAAAGCTACTGAAAAGA+AGG + chr7_3:86880733-86880752 Msa1133400:CDS 30.0%
GAAAAAGCTACTGAAAAGAA+GGG + chr7_3:86880734-86880753 Msa1133400:CDS 30.0%
AGTAGAACCAGAAAAAGAAA+AGG + chr7_3:86880763-86880782 Msa1133400:CDS 30.0%
ATGCAAATCAATACCTTTGT+TGG - chr7_3:86880823-86880842 None:intergenic 30.0%
GTTATCCTAAAAGGAAGATT+AGG - chr7_3:86880865-86880884 None:intergenic 30.0%
TACATAAAAGCAACCAAACA+AGG - chr7_3:86881030-86881049 None:intergenic 30.0%
TACTAGCTATGTTAGTTACA+CGG + chr7_3:86881204-86881223 Msa1133400:intron 30.0%
GTAAATCATAGGATTCAAAC+AGG + chr7_3:86881256-86881275 Msa1133400:intron 30.0%
! TTTTCCATCACAAATTGCAA+CGG - chr7_3:86881302-86881321 None:intergenic 30.0%
! AATTAGTACTTAGGCTTTAG+TGG - chr7_3:86881328-86881347 None:intergenic 30.0%
TGTGGCAATAATTAGTACTT+AGG - chr7_3:86881337-86881356 None:intergenic 30.0%
ATTTCAGTGTCATACAACAT+TGG - chr7_3:86881371-86881390 None:intergenic 30.0%
AATGTTGTATGACACTGAAA+TGG + chr7_3:86881370-86881389 Msa1133400:intron 30.0%
TATCGATACCAAATGACATT+GGG - chr7_3:86881434-86881453 None:intergenic 30.0%
ATATCGATACCAAATGACAT+TGG - chr7_3:86881435-86881454 None:intergenic 30.0%
CTACAAGTAGAAGTAAAGAA+AGG + chr7_3:86881536-86881555 Msa1133400:intron 30.0%
AATAGACTTTGGTCAAAGAA+AGG - chr7_3:86881623-86881642 None:intergenic 30.0%
ACCAAAGTCTATTTAAGTAC+AGG + chr7_3:86881630-86881649 Msa1133400:intron 30.0%
ACCTGTACTTAAATAGACTT+TGG - chr7_3:86881634-86881653 None:intergenic 30.0%
TGACAGCCAAATTTAGTAAA+AGG - chr7_3:86881816-86881835 None:intergenic 30.0%
GAATGAGGACATCATATAAA+AGG + chr7_3:86881844-86881863 Msa1133400:intron 30.0%
! AACTTGCTCAAGTCTAAATT+AGG - chr7_3:86881878-86881897 None:intergenic 30.0%
AGTTGAAGAAGCAGATTATA+AGG + chr7_3:86881928-86881947 Msa1133400:CDS 30.0%
AAGAAATCACTCTCAGATTT+CGG - chr7_3:86882010-86882029 None:intergenic 30.0%
CATTCATCAAGAAGAAAGTT+AGG - chr7_3:86882130-86882149 None:intergenic 30.0%
ATATCGATGACTTCTCTAAA+AGG + chr7_3:86882195-86882214 Msa1133400:CDS 30.0%
CGGCAAAAAATTGAAATCAA+TGG - chr7_3:86882385-86882404 None:intergenic 30.0%
!! AGATTCAACTGTTTCTACAT+TGG + chr7_3:86882548-86882567 Msa1133400:three_prime_UTR 30.0%
! AAACTCTTCCAATTTTGAAC+AGG - chr7_3:86882602-86882621 None:intergenic 30.0%
CTCTTATTGGACAAAATACA+GGG - chr7_3:86882627-86882646 None:intergenic 30.0%
TCTCTTATTGGACAAAATAC+AGG - chr7_3:86882628-86882647 None:intergenic 30.0%
!! TTGAACATCGCTTTTACTTT+TGG + chr7_3:86882768-86882787 Msa1133400:three_prime_UTR 30.0%
! TACTTTTGGTACATTCATGT+TGG + chr7_3:86882782-86882801 Msa1133400:three_prime_UTR 30.0%
ACAACCATCCTTAACAAAAA+GGG - chr7_3:86882829-86882848 None:intergenic 30.0%
AACAACCATCCTTAACAAAA+AGG - chr7_3:86882830-86882849 None:intergenic 30.0%
! TCAATCCTCTAATTTGTAAC+CGG - chr7_3:86882872-86882891 None:intergenic 30.0%
AAAAAATTGCAGAAACACCA+TGG - chr7_3:86882895-86882914 None:intergenic 30.0%
!!! GTGTTTCTGCAATTTTTTTC+TGG + chr7_3:86882897-86882916 Msa1133400:three_prime_UTR 30.0%
AAGAAAAAGGGAATACCTTG+TGG - chr7_3:86878323-86878342 None:intergenic 35.0%
ATCATGCATGTTTGAATTCG+CGG - chr7_3:86878486-86878505 None:intergenic 35.0%
TTGAATATTGGAAAGCCTTG+TGG + chr7_3:86878553-86878572 Msa1133400:intron 35.0%
CAAACACACAAATAACCACA+AGG - chr7_3:86878571-86878590 None:intergenic 35.0%
! CTCCGCCTTATTCTTTAATT+TGG + chr7_3:86878907-86878926 Msa1133400:intron 35.0%
GGTGAGAAAACTGTAATAGT+GGG - chr7_3:86878979-86878998 None:intergenic 35.0%
TTATTGTATTCGGGTACTTG+GGG - chr7_3:86879009-86879028 None:intergenic 35.0%
AAGTTCTTCTCCTAATATGG+AGG - chr7_3:86879049-86879068 None:intergenic 35.0%
TCCATATTAGGAGAAGAACT+TGG + chr7_3:86879048-86879067 Msa1133400:intron 35.0%
CCATATTAGGAGAAGAACTT+GGG + chr7_3:86879049-86879068 Msa1133400:intron 35.0%
! ACAGGTTGAATTGGCTTATT+TGG - chr7_3:86879462-86879481 None:intergenic 35.0%
! TAAATATGGTATCTGGAGTC+AGG - chr7_3:86879564-86879583 None:intergenic 35.0%
TAAATCCTTCCTCTTTACTG+AGG + chr7_3:86879618-86879637 Msa1133400:intron 35.0%
CATAAACATCCTCAGTAAAG+AGG - chr7_3:86879630-86879649 None:intergenic 35.0%
TACAGAGAGTGATTGGAATA+GGG - chr7_3:86879890-86879909 None:intergenic 35.0%
ATACAGAGAGTGATTGGAAT+AGG - chr7_3:86879891-86879910 None:intergenic 35.0%
AGAATCATACAGAGAGTGAT+TGG - chr7_3:86879897-86879916 None:intergenic 35.0%
ATGAGCCACCTAAACTTAAA+TGG + chr7_3:86880066-86880085 Msa1133400:CDS 35.0%
TGAGCCACCTAAACTTAAAT+GGG + chr7_3:86880067-86880086 Msa1133400:CDS 35.0%
! TCTTCCCATTTAAGTTTAGG+TGG - chr7_3:86880074-86880093 None:intergenic 35.0%
! TCTTTTCAGATTGTCCTTAC+AGG - chr7_3:86880155-86880174 None:intergenic 35.0%
TTCTTTAGACAAGATGTGTG+TGG + chr7_3:86880407-86880426 Msa1133400:intron 35.0%
TCTTTAGACAAGATGTGTGT+GGG + chr7_3:86880408-86880427 Msa1133400:intron 35.0%
! TTCTCAGTAGTTTTTACTGC+AGG - chr7_3:86880695-86880714 None:intergenic 35.0%
TGCAGTAAAAACTACTGAGA+AGG + chr7_3:86880694-86880713 Msa1133400:CDS 35.0%
!!! GCTTTTTCAGAAGGCTTTTT+AGG - chr7_3:86880722-86880741 None:intergenic 35.0%
! GGTTCTTCCTTTTCTTTTTC+TGG - chr7_3:86880773-86880792 None:intergenic 35.0%
AAAAGAAAAGGAAGAACCAC+TGG + chr7_3:86880775-86880794 Msa1133400:CDS 35.0%
! CTGATCCTAATCTTCCTTTT+AGG + chr7_3:86880857-86880876 Msa1133400:intron 35.0%
CCAAACAAGGAAGAAGATTT+GGG - chr7_3:86881017-86881036 None:intergenic 35.0%
ACCAAACAAGGAAGAAGATT+TGG - chr7_3:86881018-86881037 None:intergenic 35.0%
!!! GTGGTTTTATTGTGGTAAAG+TGG + chr7_3:86881066-86881085 Msa1133400:intron 35.0%
AAAGTGGTCTGTGAATACAT+TGG + chr7_3:86881082-86881101 Msa1133400:intron 35.0%
AAGTGGTCTGTGAATACATT+GGG + chr7_3:86881083-86881102 Msa1133400:intron 35.0%
!!! TTTTAGAGCCAGTTCTTCTT+TGG + chr7_3:86881130-86881149 Msa1133400:intron 35.0%
TCTTAGAGGCTGTAAATCAT+AGG + chr7_3:86881245-86881264 Msa1133400:intron 35.0%
AATTCCGTTGCAATTTGTGA+TGG + chr7_3:86881295-86881314 Msa1133400:intron 35.0%
ACATTGGATCTTAAAACGTG+TGG - chr7_3:86881355-86881374 None:intergenic 35.0%
! GCTAAGTAAGATTGGCTATA+AGG - chr7_3:86881488-86881507 None:intergenic 35.0%
TAAAGAAAGGTTGCGAATGA+GGG + chr7_3:86881549-86881568 Msa1133400:intron 35.0%
AATCATAGAAAGGAAGCCAA+AGG - chr7_3:86881680-86881699 None:intergenic 35.0%
GGACATCATATAAAAGGAAC+AGG + chr7_3:86881850-86881869 Msa1133400:intron 35.0%
! TTCTTCAACTAGTCTGTCAT+AGG - chr7_3:86881918-86881937 None:intergenic 35.0%
GAAATCTGAGAGTGATTTCT+TGG + chr7_3:86882009-86882028 Msa1133400:CDS 35.0%
TACAGAAGACGCAATATCTT+TGG - chr7_3:86882229-86882248 None:intergenic 35.0%
! TGTCTTCTTTTTACCAGCAT+TGG - chr7_3:86882292-86882311 None:intergenic 35.0%
AATGCTGGTAAAAAGAAGAC+AGG + chr7_3:86882291-86882310 Msa1133400:CDS 35.0%
ATTGAAATCAATGGGAAAGG+AGG - chr7_3:86882376-86882395 None:intergenic 35.0%
!!! CAATTTTTTGCCGTGTCTTT+AGG + chr7_3:86882392-86882411 Msa1133400:intron 35.0%
!! ACTGTTTCTACATTGGATGT+TGG + chr7_3:86882555-86882574 Msa1133400:three_prime_UTR 35.0%
!! CTGTTTCTACATTGGATGTT+GGG + chr7_3:86882556-86882575 Msa1133400:three_prime_UTR 35.0%
GGCATAAACCTGTTCAAAAT+TGG + chr7_3:86882591-86882610 Msa1133400:three_prime_UTR 35.0%
! AATTCACCCCCTTTTTGTTA+AGG + chr7_3:86882818-86882837 Msa1133400:three_prime_UTR 35.0%
AACCATCCTTAACAAAAAGG+GGG - chr7_3:86882827-86882846 None:intergenic 35.0%
CAACCATCCTTAACAAAAAG+GGG - chr7_3:86882828-86882847 None:intergenic 35.0%
ACAAATTAGAGGATTGACCA+TGG + chr7_3:86882875-86882894 Msa1133400:three_prime_UTR 35.0%
!! GAGTGAGATTTGGTGTTCTA+GGG - chr7_3:86878181-86878200 None:intergenic 40.0%
ATTGAAGAGAAACGCAACAG+CGG - chr7_3:86878210-86878229 None:intergenic 40.0%
TCTCACTCAATTCATCTCTC+CGG + chr7_3:86878245-86878264 Msa1133400:five_prime_UTR 40.0%
AAAAGGGAATACCTTGTGGA+CGG - chr7_3:86878319-86878338 None:intergenic 40.0%
!!! CATGTTTTTGGAGTTTGACG+AGG + chr7_3:86878713-86878732 Msa1133400:intron 40.0%
TCTTCATGCAGTTGGTTATC+AGG + chr7_3:86878809-86878828 Msa1133400:intron 40.0%
TCTTGATCAAGTGACGACAA+TGG + chr7_3:86878858-86878877 Msa1133400:exon 40.0%
GGGTGAGAAAACTGTAATAG+TGG - chr7_3:86878980-86878999 None:intergenic 40.0%
TAGCGAGTTTCCTCCATATT+AGG + chr7_3:86879036-86879055 Msa1133400:intron 40.0%
CCCAAGTTCTTCTCCTAATA+TGG - chr7_3:86879052-86879071 None:intergenic 40.0%
AAGCACTTGTGAGACTGTTT+AGG - chr7_3:86879424-86879443 None:intergenic 40.0%
AAGAACACACTGCATATCCA+GGG - chr7_3:86879485-86879504 None:intergenic 40.0%
AAAGAACACACTGCATATCC+AGG - chr7_3:86879486-86879505 None:intergenic 40.0%
AACATCCTCAGTAAAGAGGA+AGG - chr7_3:86879626-86879645 None:intergenic 40.0%
TGCTGGTGTATTTGTTTCAG+AGG + chr7_3:86880010-86880029 Msa1133400:intron 40.0%
TGTTTCAGAGGAAGAGCAAT+TGG + chr7_3:86880022-86880041 Msa1133400:intron 40.0%
TAAATGGGAAGATGAAGACG+TGG + chr7_3:86880082-86880101 Msa1133400:CDS 40.0%
AAGATGATGTGAAGGACTCA+TGG + chr7_3:86880108-86880127 Msa1133400:CDS 40.0%
AGATGATGTGAAGGACTCAT+GGG + chr7_3:86880109-86880128 Msa1133400:CDS 40.0%
TAAAGCAACTGTGGTTGCAT+TGG - chr7_3:86880319-86880338 None:intergenic 40.0%
CTTTAGACAAGATGTGTGTG+GGG + chr7_3:86880409-86880428 Msa1133400:intron 40.0%
CTGAAAAACTTCGCCAACAA+AGG + chr7_3:86880807-86880826 Msa1133400:CDS 40.0%
! ATCATATTTTCTTAGCCGGC+AGG - chr7_3:86880957-86880976 None:intergenic 40.0%
! AAGAAGATTTGGGTTTGTGG+AGG - chr7_3:86881007-86881026 None:intergenic 40.0%
! AGGAAGAAGATTTGGGTTTG+TGG - chr7_3:86881010-86881029 None:intergenic 40.0%
CCCAAATCTTCTTCCTTGTT+TGG + chr7_3:86881014-86881033 Msa1133400:intron 40.0%
! GTACTTCTTTTACGGAAACG+TGG + chr7_3:86881047-86881066 Msa1133400:intron 40.0%
!!! ACGGAAACGTGGTTTTATTG+TGG + chr7_3:86881058-86881077 Msa1133400:intron 40.0%
AGTAGATGCCAAAGAAGAAC+TGG - chr7_3:86881141-86881160 None:intergenic 40.0%
!!! TAGCTCTTTTTGGGTCTTAG+AGG + chr7_3:86881231-86881250 Msa1133400:intron 40.0%
ATCATAGGATTCAAACAGGG+TGG + chr7_3:86881260-86881279 Msa1133400:intron 40.0%
AAATGGCAATGAGCTCTTTG+CGG + chr7_3:86881387-86881406 Msa1133400:intron 40.0%
ATAAGGCCTAGACAACACAA+TGG - chr7_3:86881471-86881490 None:intergenic 40.0%
GTAAAGAAAGGTTGCGAATG+AGG + chr7_3:86881548-86881567 Msa1133400:intron 40.0%
GCTGTCATAGTTTCTGAATG+AGG + chr7_3:86881829-86881848 Msa1133400:intron 40.0%
AGCAGATTATAAGGCCACTA+AGG + chr7_3:86881937-86881956 Msa1133400:CDS 40.0%
AAGGCCACTAAGGAATTGTT+TGG + chr7_3:86881947-86881966 Msa1133400:CDS 40.0%
ACCACCAAACAATTCCTTAG+TGG - chr7_3:86881954-86881973 None:intergenic 40.0%
! ACTAAGGAATTGTTTGGTGG+TGG + chr7_3:86881953-86881972 Msa1133400:CDS 40.0%
!!! TTTTTTGCCGTGTCTTTAGG+TGG + chr7_3:86882395-86882414 Msa1133400:intron 40.0%
TTTCTTGCCACCTAAAGACA+CGG - chr7_3:86882405-86882424 None:intergenic 40.0%
GCAGCAACAAAATCTTCATC+AGG - chr7_3:86882449-86882468 None:intergenic 40.0%
TGCTGATCGATATGATGCTT+TGG + chr7_3:86882466-86882485 Msa1133400:CDS 40.0%
TTGAACAGGTTTATGCCGAA+GGG - chr7_3:86882588-86882607 None:intergenic 40.0%
TTTGAACAGGTTTATGCCGA+AGG - chr7_3:86882589-86882608 None:intergenic 40.0%
ACTGATGCACACTCTCTTAT+TGG - chr7_3:86882640-86882659 None:intergenic 40.0%
TTATCACATTTATCACCCGC+CGG + chr7_3:86882850-86882869 Msa1133400:three_prime_UTR 40.0%
! ATCCTCTAATTTGTAACCGG+CGG - chr7_3:86882869-86882888 None:intergenic 40.0%
CCGAACACTTCAATTTGGAT+TGG - chr7_3:86882965-86882984 None:intergenic 40.0%
!! GGAGTGAGATTTGGTGTTCT+AGG - chr7_3:86878182-86878201 None:intergenic 45.0%
!! GAGTTTCTAGCTGATTGTGG+CGG - chr7_3:86878297-86878316 None:intergenic 45.0%
!! ACGGAGTTTCTAGCTGATTG+TGG - chr7_3:86878300-86878319 None:intergenic 45.0%
TCATCAATCGCGGTAAGAAG+TGG - chr7_3:86878403-86878422 None:intergenic 45.0%
!!! GTTTTTGGAGTTTGACGAGG+TGG + chr7_3:86878716-86878735 Msa1133400:intron 45.0%
TGATCAAGTGACGACAATGG+AGG + chr7_3:86878861-86878880 Msa1133400:exon 45.0%
TGACGACAATGGAGGATGAT+TGG + chr7_3:86878869-86878888 Msa1133400:exon 45.0%
GACGACAATGGAGGATGATT+GGG + chr7_3:86878870-86878889 Msa1133400:exon 45.0%
ACGACAATGGAGGATGATTG+GGG + chr7_3:86878871-86878890 Msa1133400:exon 45.0%
!! AGTGGGTTGACAGATTGTAC+TGG - chr7_3:86878962-86878981 None:intergenic 45.0%
AGGAGAAGAACTTGGGTGTT+TGG + chr7_3:86879056-86879075 Msa1133400:intron 45.0%
GGAGAAGAACTTGGGTGTTT+GGG + chr7_3:86879057-86879076 Msa1133400:intron 45.0%
TAAGGAGAGTTCGGAAAGTG+TGG - chr7_3:86879090-86879109 None:intergenic 45.0%
CACTTTCCGAACTCTCCTTA+CGG + chr7_3:86879090-86879109 Msa1133400:intron 45.0%
CAGTTTCCGTAAGGAGAGTT+CGG - chr7_3:86879099-86879118 None:intergenic 45.0%
AACTCTCCTTACGGAAACTG+TGG + chr7_3:86879099-86879118 Msa1133400:intron 45.0%
TGGCACCTATACCAGGTATT+CGG + chr7_3:86879119-86879138 Msa1133400:intron 45.0%
TGAACCCGAATACCTGGTAT+AGG - chr7_3:86879127-86879146 None:intergenic 45.0%
TTGTCCCTAAATTGTCCCTG+CGG + chr7_3:86879188-86879207 Msa1133400:intron 45.0%
GAAGACCGAGAATAACGTCT+TGG + chr7_3:86879223-86879242 Msa1133400:intron 45.0%
ACCGAGAATAACGTCTTGGT+GGG + chr7_3:86879227-86879246 Msa1133400:intron 45.0%
! TATCCAGGGACAGGTTGAAT+TGG - chr7_3:86879471-86879490 None:intergenic 45.0%
! ATATGGTATCTGGAGTCAGG+TGG - chr7_3:86879561-86879580 None:intergenic 45.0%
CGTGGATGAAGATGATGTGA+AGG + chr7_3:86880100-86880119 Msa1133400:CDS 45.0%
TCAGATTGTCCTTACAGGAG+CGG - chr7_3:86880150-86880169 None:intergenic 45.0%
CGTGCTTGCATGTTATCATC+AGG + chr7_3:86880658-86880677 Msa1133400:intron 45.0%
! AACATTCTGTAGCCTTGCCA+TGG + chr7_3:86880928-86880947 Msa1133400:intron 45.0%
CATCTACTGTGTACTTGTGC+AGG + chr7_3:86881153-86881172 Msa1133400:intron 45.0%
! ACACGGTGAGTAGCTCTTTT+TGG + chr7_3:86881221-86881240 Msa1133400:intron 45.0%
! CACGGTGAGTAGCTCTTTTT+GGG + chr7_3:86881222-86881241 Msa1133400:intron 45.0%
AATGAGCTCTTTGCGGTGAT+GGG + chr7_3:86881394-86881413 Msa1133400:intron 45.0%
ACGATGGACCCAATGTCATT+TGG + chr7_3:86881423-86881442 Msa1133400:intron 45.0%
AGGTCACCATTGTGTTGTCT+AGG + chr7_3:86881462-86881481 Msa1133400:intron 45.0%
GCCACTAAGGAATTGTTTGG+TGG + chr7_3:86881950-86881969 Msa1133400:CDS 45.0%
! CACCCCCTTTTTGTTAAGGA+TGG + chr7_3:86882822-86882841 Msa1133400:three_prime_UTR 45.0%
! TCCTCTAATTTGTAACCGGC+GGG - chr7_3:86882868-86882887 None:intergenic 45.0%
!!! TATAGTTTTAAAATAAAAAA+TGG + chr7_3:86880220-86880239 Msa1133400:intron 5.0%
AGCTAGAAACTCCGTCCACA+AGG + chr7_3:86878305-86878324 Msa1133400:five_prime_UTR 50.0%
ATTCGGGTACTTGGGGAAGA+GGG - chr7_3:86879002-86879021 None:intergenic 50.0%
TATTCGGGTACTTGGGGAAG+AGG - chr7_3:86879003-86879022 None:intergenic 50.0%
! TAGGTGCCACAGTTTCCGTA+AGG - chr7_3:86879108-86879127 None:intergenic 50.0%
GAAACTGTGGCACCTATACC+AGG + chr7_3:86879112-86879131 Msa1133400:intron 50.0%
GGCACCTATACCAGGTATTC+GGG + chr7_3:86879120-86879139 Msa1133400:intron 50.0%
! GTATTCGGGTTCAACTCCCA+CGG + chr7_3:86879134-86879153 Msa1133400:intron 50.0%
TCTGCCGCAGGGACAATTTA+GGG - chr7_3:86879195-86879214 None:intergenic 50.0%
TAAATTGTCCCTGCGGCAGA+GGG + chr7_3:86879195-86879214 Msa1133400:intron 50.0%
GACCGAGAATAACGTCTTGG+TGG + chr7_3:86879226-86879245 Msa1133400:intron 50.0%
CCCCACCAAGACGTTATTCT+CGG - chr7_3:86879231-86879250 None:intergenic 50.0%
CCGAGAATAACGTCTTGGTG+GGG + chr7_3:86879228-86879247 Msa1133400:intron 50.0%
AAGCCAATTCAACCTGTCCC+TGG + chr7_3:86879465-86879484 Msa1133400:intron 50.0%
CAGATTGTCCTTACAGGAGC+GGG - chr7_3:86880149-86880168 None:intergenic 50.0%
! CTGTGGTTGCATTGGCATCA+AGG - chr7_3:86880311-86880330 None:intergenic 50.0%
!! GTTTTTACTGCAGGTGCTGC+AGG - chr7_3:86880686-86880705 None:intergenic 50.0%
! TTTTCAGCCAGAGGATCCAG+TGG - chr7_3:86880794-86880813 None:intergenic 50.0%
!! TGGCGAAGTTTTTCAGCCAG+AGG - chr7_3:86880803-86880822 None:intergenic 50.0%
CAATGAGCTCTTTGCGGTGA+TGG + chr7_3:86881393-86881412 Msa1133400:intron 50.0%
!!! CGGTGATGGGACTTTTACGA+TGG + chr7_3:86881407-86881426 Msa1133400:intron 50.0%
AGAAAGGTTGCGAATGAGGG+AGG + chr7_3:86881552-86881571 Msa1133400:intron 50.0%
GAAAGGTTGCGAATGAGGGA+GGG + chr7_3:86881553-86881572 Msa1133400:intron 50.0%
! ACACAGGCTTCGTGCTTTTG+AGG + chr7_3:86882051-86882070 Msa1133400:CDS 50.0%
GCAGAGAAAGAAGCCAATGC+TGG + chr7_3:86882276-86882295 Msa1133400:CDS 50.0%
GATGTTGGGACAAGACCCTT+CGG + chr7_3:86882570-86882589 Msa1133400:three_prime_UTR 50.0%
! ACCCGCCGGTTACAAATTAG+AGG + chr7_3:86882864-86882883 Msa1133400:three_prime_UTR 50.0%
GCGGCTACAGGAGTGAGATT+TGG - chr7_3:86878191-86878210 None:intergenic 55.0%
AGAAACGCAACAGCGGCTAC+AGG - chr7_3:86878203-86878222 None:intergenic 55.0%
ATCTCTCCGGTTATCTCCGC+CGG + chr7_3:86878258-86878277 Msa1133400:five_prime_UTR 55.0%
GGAAATCCGGCGGAGATAAC+CGG - chr7_3:86878267-86878286 None:intergenic 55.0%
! TTCTAGCTGATTGTGGCGGC+CGG - chr7_3:86878293-86878312 None:intergenic 55.0%
TTCGGGTACTTGGGGAAGAG+GGG - chr7_3:86879001-86879020 None:intergenic 55.0%
GGGAGTTGAACCCGAATACC+TGG - chr7_3:86879133-86879152 None:intergenic 55.0%
AGCGAGTGTTTGCCTTCCGT+GGG - chr7_3:86879153-86879172 None:intergenic 55.0%
TAGCGAGTGTTTGCCTTCCG+TGG - chr7_3:86879154-86879173 None:intergenic 55.0%
CTCTGCCGCAGGGACAATTT+AGG - chr7_3:86879196-86879215 None:intergenic 55.0%
CTAAATTGTCCCTGCGGCAG+AGG + chr7_3:86879194-86879213 Msa1133400:intron 55.0%
AAATTGTCCCTGCGGCAGAG+GGG + chr7_3:86879196-86879215 Msa1133400:intron 55.0%
GAATAACGTCTTGGTGGGGC+TGG + chr7_3:86879232-86879251 Msa1133400:intron 55.0%
CACACTGCATATCCAGGGAC+AGG - chr7_3:86879480-86879499 None:intergenic 55.0%
GGAAGAACCACTGGATCCTC+TGG + chr7_3:86880784-86880803 Msa1133400:CDS 55.0%
GCGTCACTGCAGTAGACCTT+TGG + chr7_3:86881661-86881680 Msa1133400:intron 55.0%
ACGCAGAGCTCATCTCACAC+AGG + chr7_3:86882035-86882054 Msa1133400:CDS 55.0%
TCGGGTACTTGGGGAAGAGG+GGG - chr7_3:86879000-86879019 None:intergenic 60.0%
TCGGGTTCAACTCCCACGGA+AGG + chr7_3:86879138-86879157 Msa1133400:intron 60.0%
AATTGTCCCTGCGGCAGAGG+GGG + chr7_3:86879197-86879216 Msa1133400:intron 60.0%
AAGACGAGCCCGCTCCTGTA+AGG + chr7_3:86880138-86880157 Msa1133400:intron 60.0%
TCTTAGCCGGCAGGCATCCA+TGG - chr7_3:86880948-86880967 None:intergenic 60.0%
TCTCCGCCGGATTTCCTCGC+CGG + chr7_3:86878271-86878290 Msa1133400:five_prime_UTR 65.0%
TTCTTGCCCCCTCTGCCGCA+GGG - chr7_3:86879206-86879225 None:intergenic 65.0%
GCCTTGCCATGGATGCCTGC+CGG + chr7_3:86880939-86880958 Msa1133400:intron 65.0%
TGGCGGCCGGCGAGGAAATC+CGG - chr7_3:86878280-86878299 None:intergenic 70.0%
CTTCTTGCCCCCTCTGCCGC+AGG - chr7_3:86879207-86879226 None:intergenic 70.0%
GCCGGCAGGCATCCATGGCA+AGG - chr7_3:86880943-86880962 None:intergenic 70.0%
CGGCCGGCGAGGAAATCCGG+CGG - chr7_3:86878277-86878296 None:intergenic 75.0%
GCTGATTGTGGCGGCCGGCG+AGG - chr7_3:86878288-86878307 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 86878160 86882984 86878160 ID=Msa1133400;Name=Msa1133400
chr7_3 mRNA 86878160 86882984 86878160 ID=Msa1133400-mRNA-1;Parent=Msa1133400;Name=Msa1133400-mRNA-1;_AED=0.01;_eAED=0.01;_QI=224|1|1|1|1|1|7|476|230
chr7_3 exon 86878160 86878326 86878160 ID=Msa1133400-mRNA-1:exon:26080;Parent=Msa1133400-mRNA-1
chr7_3 exon 86878820 86878892 86878820 ID=Msa1133400-mRNA-1:exon:26081;Parent=Msa1133400-mRNA-1
chr7_3 exon 86880030 86880154 86880030 ID=Msa1133400-mRNA-1:exon:26082;Parent=Msa1133400-mRNA-1
chr7_3 exon 86880680 86880828 86880680 ID=Msa1133400-mRNA-1:exon:26083;Parent=Msa1133400-mRNA-1
chr7_3 exon 86881925 86882072 86881925 ID=Msa1133400-mRNA-1:exon:26084;Parent=Msa1133400-mRNA-1
chr7_3 exon 86882153 86882312 86882153 ID=Msa1133400-mRNA-1:exon:26085;Parent=Msa1133400-mRNA-1
chr7_3 exon 86882414 86882984 86882414 ID=Msa1133400-mRNA-1:exon:26086;Parent=Msa1133400-mRNA-1
chr7_3 five_prime_UTR 86878160 86878326 86878160 ID=Msa1133400-mRNA-1:five_prime_utr;Parent=Msa1133400-mRNA-1
chr7_3 five_prime_UTR 86878820 86878876 86878820 ID=Msa1133400-mRNA-1:five_prime_utr;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86878877 86878892 86878877 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86880030 86880154 86880030 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86880680 86880828 86880680 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86881925 86882072 86881925 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86882153 86882312 86882153 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 CDS 86882414 86882508 86882414 ID=Msa1133400-mRNA-1:cds;Parent=Msa1133400-mRNA-1
chr7_3 three_prime_UTR 86882509 86882984 86882509 ID=Msa1133400-mRNA-1:three_prime_utr;Parent=Msa1133400-mRNA-1
Gene Sequence

>Msa1133400

ATGGAGGATGATTGGGAGGAAGAGCAATTGGCACCCATTGATCTTAAGTTACATGAGCCACCTAAACTTAAATGGGAAGATGAAGACGTGGATGAAGATGATGTGAAGGACTCATGGGAAGAAGAAGACGAGCCCGCTCCTGCACCTGCAGCACCTGCAGTAAAAACTACTGAGAAGGCTCCTAAAAAGCCTTCTGAAAAAGCTACTGAAAAGAAGGGAAAGAAAGTAGAACCAGAAAAAGAAAAGGAAGAACCACTGGATCCTCTGGCTGAAAAACTTCGCCAACAAAGACTAGTTGAAGAAGCAGATTATAAGGCCACTAAGGAATTGTTTGGTGGTGGTAACGATGAAAAGAACCTTGATACTTTTATACCGAAATCTGAGAGTGATTTCTTGGAGTACGCAGAGCTCATCTCACACAGGCTTCGTGCTTTTGAGAAAAGTTATCATTATATGGGTCTACTGAAGAATGTAATGAGAATATCGATGACTTCTCTAAAAGGAGCAGATGCCAAAGATATTGCGTCTTCTGTAACTGCCATTGCAAATGAAAAGATCAAAGCAGAGAAAGAAGCCAATGCTGGTAAAAAGAAGACAGGTGGCAAGAAAAAGCAGCTTACTGTTGACAAACCTGATGAAGATTTTGTTGCTGCTGATCGATATGATGCTTTGGACGATTATGATTTTATGTGA

Protein sequence

>Msa1133400

MEDDWEEEQLAPIDLKLHEPPKLKWEDEDVDEDDVKDSWEEEDEPAPAPAAPAVKTTEKAPKKPSEKATEKKGKKVEPEKEKEEPLDPLAEKLRQQRLVEEADYKATKELFGGGNDEKNLDTFIPKSESDFLEYAELISHRLRAFEKSYHYMGLLKNVMRISMTSLKGADAKDIASSVTAIANEKIKAEKEANAGKKKTGGKKKQLTVDKPDEDFVAADRYDALDDYDFM*