AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0476240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476240 MtrunA17_Chr3g0135961 95.628 549 18 2 1 543 1 549 0.0 1069
Msa0476240 MtrunA17_Chr1g0150781 66.545 547 173 4 6 543 8 553 0.0 716
Msa0476240 MtrunA17_Chr4g0070871 46.429 560 236 13 1 543 1 513 2.90e-153 448
Msa0476240 MtrunA17_Chr2g0299981 44.463 587 240 18 1 543 1 545 1.06e-147 435
Msa0476240 MtrunA17_Chr8g0389921 49.191 309 139 5 230 538 149 439 5.55e-87 276
Msa0476240 MtrunA17_Chr3g0112291 42.508 327 147 3 222 538 85 380 2.32e-79 254
Msa0476240 MtrunA17_Chr5g0396731 45.338 311 142 6 227 536 70 353 4.28e-73 236
Msa0476240 MtrunA17_Chr1g0158781 46.519 316 129 7 222 535 104 381 3.45e-72 235
Msa0476240 MtrunA17_Chr5g0435721 44.660 309 122 5 226 520 189 462 1.67e-69 231
Msa0476240 MtrunA17_Chr1g0150451 35.762 302 136 7 230 531 78 321 1.78e-43 157
Msa0476240 MtrunA17_Chr3g0136711 35.762 302 136 7 230 531 35 278 2.33e-43 156
Msa0476240 MtrunA17_Chr3g0126511 35.275 309 140 7 231 538 96 345 6.34e-42 154
Msa0476240 MtrunA17_Chr1g0212961 35.762 302 132 9 230 531 96 335 1.72e-41 152
Msa0476240 MtrunA17_Chr5g0430481 35.496 262 132 7 275 534 149 375 2.32e-37 142
Msa0476240 MtrunA17_Chr3g0105371 32.468 308 149 10 231 534 87 339 4.80e-34 132
Msa0476240 MtrunA17_Chr3g0105351 30.844 308 154 9 231 534 63 315 7.03e-33 128
Msa0476240 MtrunA17_Chr4g0050381 33.835 266 132 7 273 535 54 278 2.29e-31 122
Msa0476240 MtrunA17_Chr4g0065141 30.421 309 158 10 237 536 93 353 2.16e-30 122
Msa0476240 MtrunA17_Chr5g0407161 33.333 258 128 7 280 531 124 343 2.22e-30 122
Msa0476240 MtrunA17_Chr1g0171571 30.744 309 159 8 230 534 388 645 4.05e-29 122
Msa0476240 MtrunA17_Chr8g0360351 32.453 265 133 7 271 531 57 279 1.55e-27 112
Msa0476240 MtrunA17_Chr3g0136811 28.912 294 143 7 230 483 24 291 1.77e-27 114
Msa0476240 MtrunA17_Chr3g0144111 32.171 258 110 7 280 531 27 225 5.52e-27 110
Msa0476240 MtrunA17_Chr2g0317021 31.343 268 138 7 271 534 108 333 8.17e-27 111
Msa0476240 MtrunA17_Chr1g0194191 31.298 262 146 8 280 535 118 351 8.94e-27 112
Msa0476240 MtrunA17_Chr4g0001761 27.954 347 167 11 230 534 24 329 1.03e-26 111
Msa0476240 MtrunA17_Chr2g0293811 28.947 266 147 7 280 535 100 333 2.06e-26 110
Msa0476240 MtrunA17_Chr5g0426141 33.721 258 127 7 280 534 66 282 2.61e-26 108
Msa0476240 MtrunA17_Chr3g0127091 26.239 343 171 11 225 533 55 349 3.10e-26 110
Msa0476240 MtrunA17_Chr3g0115851 32.075 265 136 7 273 534 59 282 1.64e-25 106
Msa0476240 MtrunA17_Chr3g0138281 30.797 276 147 9 268 536 110 348 1.81e-25 108
Msa0476240 MtrunA17_Chr4g0051661 32.157 255 128 8 280 531 183 395 2.72e-25 108
Msa0476240 MtrunA17_Chr1g0150071 28.136 295 148 7 230 485 24 293 2.16e-24 104
Msa0476240 MtrunA17_Chr2g0279151 30.943 265 139 7 273 534 58 281 3.77e-24 102
Msa0476240 MtrunA17_Chr1g0185141 32.589 224 96 6 358 535 226 440 6.00e-24 106
Msa0476240 MtrunA17_Chr4g0067711 32.479 234 120 8 275 478 86 311 2.23e-21 95.9
Msa0476240 MtrunA17_Chr4g0066371 30.126 239 114 11 278 481 84 304 1.05e-20 94.4
Msa0476240 MtrunA17_Chr1g0207571 28.438 320 166 12 257 533 38 337 2.31e-20 93.2
Msa0476240 MtrunA17_Chr1g0151781 32.051 234 132 7 269 478 57 287 2.82e-20 92.4
Msa0476240 MtrunA17_Chr7g0243571 31.667 240 125 9 275 478 87 323 4.50e-20 93.2
Msa0476240 MtrunA17_Chr8g0371321 27.891 294 153 10 280 533 79 353 5.99e-20 92.0
Msa0476240 MtrunA17_Chr7g0250061 27.667 300 142 12 280 531 76 348 2.30e-18 87.4
Msa0476240 MtrunA17_Chr1g0192421 32.609 230 115 9 280 478 89 309 2.43e-18 86.7
Msa0476240 MtrunA17_Chr2g0324061 27.575 301 158 11 235 478 25 322 3.73e-18 87.4
Msa0476240 MtrunA17_Chr6g0483411 27.037 270 151 9 281 534 80 319 4.54e-18 85.5
Msa0476240 MtrunA17_Chr3g0133801 29.123 285 138 10 277 541 63 303 7.43e-18 86.3
Msa0476240 MtrunA17_Chr7g0263281 27.184 309 164 11 269 536 60 348 2.73e-17 84.0
Msa0476240 MtrunA17_Chr2g0295401 29.258 229 134 7 275 478 87 312 5.23e-17 82.8
Msa0476240 MtrunA17_Chr1g0181901 29.437 231 121 7 280 478 76 296 6.96e-17 82.8
Msa0476240 MtrunA17_Chr1g0209451 27.891 294 154 10 252 533 50 297 9.35e-17 82.8
Msa0476240 MtrunA17_Chr4g0022171 28.862 246 134 9 271 478 87 329 2.54e-16 81.6
Msa0476240 MtrunA17_Chr4g0004971 28.517 263 143 9 271 490 68 328 2.59e-16 80.5
Msa0476240 MtrunA17_Chr1g0211251 26.936 297 152 11 280 533 81 355 3.29e-16 80.9
Msa0476240 MtrunA17_Chr1g0153671 27.393 303 154 10 252 538 47 299 5.51e-16 80.5
Msa0476240 MtrunA17_Chr2g0294291 25.862 290 165 9 280 533 75 350 5.84e-16 79.7
Msa0476240 MtrunA17_Chr7g0221691 28.618 304 149 13 237 478 71 368 1.42e-15 79.3
Msa0476240 MtrunA17_Chr7g0272061 29.185 233 128 8 280 478 91 320 2.46e-15 77.8
Msa0476240 MtrunA17_Chr3g0089721 27.575 301 149 12 280 533 68 346 2.67e-15 77.8
Msa0476240 MtrunA17_Chr7g0249421 28.028 289 136 10 259 478 58 343 9.61e-15 77.0
Msa0476240 MtrunA17_Chr3g0089711 27.243 301 150 12 280 533 68 346 9.94e-15 75.9
Msa0476240 MtrunA17_Chr7g0271971 29.368 269 134 9 281 533 69 297 1.61e-14 75.9
Msa0476240 MtrunA17_Chr7g0225501 30.882 204 120 7 281 473 87 280 2.47e-14 75.5
Msa0476240 MtrunA17_Chr7g0238501 26.190 294 173 11 280 536 263 549 1.66e-13 73.2
Msa0476240 MtrunA17_Chr7g0256751 28.151 238 119 11 280 480 69 291 1.17e-12 70.1
Msa0476240 MtrunA17_Chr7g0256771 28.226 248 133 11 280 493 70 306 2.43e-12 68.2
Msa0476240 MtrunA17_Chr1g0192471 26.838 272 151 8 274 533 62 297 3.47e-12 68.6
Msa0476240 MtrunA17_Chr3g0089691 29.412 221 102 9 357 533 50 260 6.39e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0476240 AT1G72770.4 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0476240 AT1G72770.1 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0476240 AT1G72770.3 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0476240 AT1G17550.1 54.005 437 182 4 120 543 81 511 7.85e-158 460
Msa0476240 AT1G17550.2 54.005 437 182 4 120 543 81 511 7.85e-158 460
Msa0476240 AT5G57050.1 64.602 339 105 5 210 543 93 421 3.16e-146 427
Msa0476240 AT5G57050.2 64.602 339 105 5 210 543 53 381 4.07e-146 426
Msa0476240 AT4G26080.1 63.824 340 99 7 210 542 109 431 1.27e-143 421
Msa0476240 AT1G72770.2 49.691 324 138 5 121 433 92 401 3.25e-94 293
Msa0476240 AT1G72770.5 49.691 324 138 5 121 433 92 401 3.25e-94 293
Msa0476240 AT5G57050.3 60.526 228 79 4 210 437 93 309 5.65e-85 266
Msa0476240 AT1G07430.1 41.389 360 140 8 219 538 110 438 5.60e-78 252
Msa0476240 AT2G29380.1 44.654 318 135 7 227 534 75 361 2.28e-77 248
Msa0476240 AT5G51760.2 43.519 324 148 5 228 534 77 382 1.48e-73 239
Msa0476240 AT5G51760.1 43.519 324 148 5 228 534 107 412 2.99e-73 239
Msa0476240 AT3G11410.1 46.863 271 96 5 228 480 103 343 1.32e-71 234
Msa0476240 AT5G59220.1 45.620 274 108 5 228 491 110 352 8.08e-68 225
Msa0476240 AT5G59220.2 43.519 216 83 5 228 433 110 296 1.64e-46 165
Msa0476240 AT1G43900.1 34.839 310 133 8 230 534 124 369 1.38e-44 162
Msa0476240 AT5G53140.1 34.098 305 141 6 231 534 103 348 3.69e-42 156
Msa0476240 AT5G53140.2 34.098 305 141 6 231 534 103 348 3.69e-42 156
Msa0476240 AT5G10740.1 35.197 304 135 9 230 531 34 277 6.92e-41 151
Msa0476240 AT5G10740.2 35.197 304 135 9 230 531 34 277 6.92e-41 151
Msa0476240 AT4G31750.2 34.437 302 140 7 230 531 34 277 9.29e-41 149
Msa0476240 AT4G31750.1 33.775 302 142 6 230 531 34 277 1.14e-40 149
Msa0476240 AT4G31750.3 33.775 302 142 6 230 531 34 277 1.14e-40 149
Msa0476240 AT5G24940.1 35.314 303 136 9 230 531 34 277 1.41e-40 152
Msa0476240 AT1G67820.2 37.857 280 118 9 230 499 85 318 1.48e-39 149
Msa0476240 AT1G67820.1 37.857 280 118 9 230 499 121 354 3.88e-39 149
Msa0476240 AT2G30020.1 34.385 317 133 10 231 534 139 393 1.26e-34 135
Msa0476240 AT1G07160.1 33.660 306 149 9 231 533 122 376 8.62e-34 132
Msa0476240 AT2G40180.1 35.156 256 135 7 280 534 161 386 9.03e-32 127
Msa0476240 AT2G40860.4 31.629 313 148 10 231 534 296 551 2.76e-31 128
Msa0476240 AT2G40860.1 31.629 313 148 10 231 534 394 649 6.47e-31 127
Msa0476240 AT2G33700.1 33.333 258 128 7 280 531 123 342 6.64e-31 124
Msa0476240 AT3G51470.2 32.103 271 140 9 267 531 49 281 1.57e-29 119
Msa0476240 AT1G22280.3 33.086 269 136 9 272 534 57 287 1.69e-29 118
Msa0476240 AT3G51470.1 31.734 271 141 8 267 531 93 325 2.05e-29 119
Msa0476240 AT3G62260.3 32.946 258 140 7 280 531 27 257 2.12e-29 118
Msa0476240 AT2G34740.1 34.351 262 126 9 276 533 115 334 6.20e-29 117
Msa0476240 AT3G62260.2 32.946 258 140 7 280 531 117 347 6.50e-29 118
Msa0476240 AT3G62260.1 32.946 258 140 7 280 531 116 346 7.05e-29 118
Msa0476240 AT3G15260.2 32.841 271 130 8 271 534 64 289 3.14e-28 114
Msa0476240 AT3G15260.1 32.841 271 130 8 271 534 64 289 3.14e-28 114
Msa0476240 AT2G40860.2 31.660 259 131 7 231 480 394 615 4.05e-28 119
Msa0476240 AT1G78200.5 31.955 266 140 7 272 534 11 238 2.42e-27 110
Msa0476240 AT1G78200.4 31.955 266 140 7 272 534 11 238 2.42e-27 110
Msa0476240 AT3G17250.1 28.736 261 150 5 280 531 158 391 3.70e-27 114
Msa0476240 AT1G78200.1 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0476240 AT1G78200.3 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0476240 AT1G78200.2 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0476240 AT1G22280.1 32.342 269 132 9 272 534 57 281 1.07e-26 110
Msa0476240 AT2G25620.1 29.851 268 141 7 280 536 128 359 3.71e-26 110
Msa0476240 AT2G25620.2 29.851 268 141 7 280 536 128 359 3.71e-26 110
Msa0476240 AT1G48040.1 30.769 260 144 7 280 531 116 347 1.55e-25 108
Msa0476240 AT2G25070.1 29.275 345 166 14 230 534 24 330 4.80e-25 107
Msa0476240 AT2G25070.2 29.275 345 166 14 230 534 24 330 4.80e-25 107
Msa0476240 AT1G34750.2 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0476240 AT1G34750.1 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0476240 AT1G34750.3 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0476240 AT4G28400.1 28.280 343 172 12 201 533 4 282 2.60e-24 103
Msa0476240 AT3G63320.2 31.034 232 103 7 358 542 85 306 4.97e-24 104
Msa0476240 AT3G16800.2 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0476240 AT3G16800.1 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0476240 AT3G16800.3 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0476240 AT4G31860.3 29.252 294 142 10 230 483 24 291 7.50e-24 102
Msa0476240 AT3G63340.12 28.391 317 164 10 269 535 144 447 1.22e-23 105
Msa0476240 AT3G63320.1 31.034 232 103 7 358 542 168 389 1.26e-23 103
Msa0476240 AT4G31860.1 29.252 294 142 10 230 483 24 291 3.99e-23 101
Msa0476240 AT3G63340.11 28.391 317 164 10 269 535 144 447 9.48e-23 103
Msa0476240 AT3G63340.7 28.391 317 164 10 269 535 144 447 9.70e-23 103
Msa0476240 AT3G63340.5 28.391 317 164 10 269 535 144 447 1.01e-22 103
Msa0476240 AT3G63340.1 28.391 317 164 10 269 535 144 447 1.01e-22 103
Msa0476240 AT3G63340.8 28.391 317 164 10 269 535 144 447 1.02e-22 103
Msa0476240 AT3G63340.6 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0476240 AT3G63340.3 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0476240 AT3G63340.10 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0476240 AT3G63340.4 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0476240 AT4G28400.3 30.385 260 131 8 280 533 45 260 1.58e-22 97.8
Msa0476240 AT3G16800.4 31.276 243 131 7 283 492 1 240 1.82e-22 97.4
Msa0476240 AT3G16800.6 31.276 243 131 7 283 492 1 240 1.82e-22 97.4
Msa0476240 AT4G27800.1 26.393 341 169 12 227 533 56 348 3.48e-22 99.0
Msa0476240 AT2G34740.3 36.364 198 101 7 280 473 115 291 5.77e-22 97.1
Msa0476240 AT3G55050.1 29.836 305 152 10 280 543 84 367 6.93e-22 98.2
Msa0476240 AT3G55050.2 29.836 305 152 10 280 543 84 367 6.93e-22 98.2
Msa0476240 AT2G34740.2 36.364 198 101 7 280 473 133 309 6.96e-22 97.1
Msa0476240 AT3G51370.1 28.912 294 150 10 280 533 79 353 7.19e-22 98.2
Msa0476240 AT3G51370.3 28.912 294 150 10 280 533 79 353 7.19e-22 98.2
Msa0476240 AT4G38520.2 29.795 292 146 10 280 531 81 353 8.17e-22 98.2
Msa0476240 AT4G38520.1 29.795 292 146 10 280 531 81 353 8.17e-22 98.2
Msa0476240 AT3G17090.1 28.028 289 159 8 280 533 84 358 1.34e-21 97.4
Msa0476240 AT2G20630.1 29.588 267 126 8 280 534 63 279 2.30e-21 94.7
Msa0476240 AT4G33920.1 27.586 319 171 11 257 533 38 338 4.54e-21 95.9
Msa0476240 AT5G66080.1 29.966 297 143 12 280 533 82 356 1.65e-20 94.0
Msa0476240 AT4G31860.2 29.496 278 130 10 230 467 24 275 2.62e-20 91.7
Msa0476240 AT2G20630.2 29.572 257 131 7 280 530 63 275 3.67e-20 91.3
Msa0476240 AT2G40860.3 29.289 239 123 7 231 460 394 595 9.12e-20 93.6
Msa0476240 AT5G02760.1 29.630 243 119 9 273 478 63 290 1.40e-19 91.3
Msa0476240 AT3G63340.2 39.865 148 75 6 392 535 343 480 1.76e-19 93.2
Msa0476240 AT5G27930.1 33.778 225 120 9 280 478 92 313 2.85e-19 90.1
Msa0476240 AT5G27930.2 33.778 225 120 9 280 478 92 313 2.85e-19 90.1
Msa0476240 AT4G08260.1 29.528 254 115 6 281 534 20 209 3.77e-19 86.7
Msa0476240 AT4G28400.2 28.315 279 147 10 201 469 4 239 4.58e-19 87.4
Msa0476240 AT3G06270.1 25.256 293 150 7 277 534 85 343 4.71e-19 89.4
Msa0476240 AT1G17545.1 39.456 147 42 4 252 397 78 178 6.20e-19 85.1
Msa0476240 AT4G03415.1 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0476240 AT4G03415.3 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0476240 AT4G03415.2 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0476240 AT3G17090.2 28.448 232 126 6 280 480 84 306 1.78e-18 87.0
Msa0476240 AT1G09160.2 29.811 265 138 8 281 533 69 297 2.15e-18 88.2
Msa0476240 AT1G09160.1 29.811 265 138 8 281 533 69 297 2.15e-18 88.2
Msa0476240 AT1G34750.4 33.659 205 105 8 280 478 66 245 3.80e-18 84.7
Msa0476240 AT5G26010.1 30.802 237 133 7 263 478 56 282 5.67e-18 85.9
Msa0476240 AT1G68410.4 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0476240 AT1G68410.3 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0476240 AT1G68410.1 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0476240 AT1G68410.2 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0476240 AT3G12620.2 26.689 296 160 9 280 536 83 360 8.93e-18 85.9
Msa0476240 AT3G12620.1 26.689 296 160 9 280 536 83 360 8.93e-18 85.9
Msa0476240 AT3G51370.2 30.942 223 107 7 351 533 53 268 1.17e-17 84.3
Msa0476240 AT4G27800.2 26.117 291 150 10 227 483 56 315 2.43e-17 84.0
Msa0476240 AT4G27800.3 26.117 291 150 10 227 483 56 315 2.68e-17 83.6
Msa0476240 AT5G66080.2 32.110 218 99 7 356 533 44 252 5.31e-17 82.0
Msa0476240 AT1G03590.1 30.328 244 131 7 271 478 81 321 9.19e-17 83.6
Msa0476240 AT3G05640.2 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0476240 AT3G05640.1 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0476240 AT3G05640.3 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0476240 AT1G47380.1 28.159 277 135 10 277 533 61 293 7.08e-16 80.5
Msa0476240 AT1G18030.2 27.700 213 108 7 281 469 110 300 1.02e-15 78.6
Msa0476240 AT5G36250.1 28.854 253 125 10 280 481 98 346 1.32e-15 79.7
Msa0476240 AT4G33920.2 29.200 250 126 9 326 533 15 255 1.16e-14 75.1
Msa0476240 AT5G06750.3 25.510 294 159 9 280 531 82 357 1.18e-14 76.3
Msa0476240 AT5G06750.1 25.510 294 159 9 280 531 82 357 1.18e-14 76.3
Msa0476240 AT4G32950.1 28.428 299 154 12 268 537 53 320 3.12e-14 74.3
Msa0476240 AT4G33920.3 29.018 224 113 7 351 533 7 225 1.49e-13 71.6
Msa0476240 AT1G79630.6 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0476240 AT1G79630.3 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0476240 AT1G79630.4 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0476240 AT1G79630.5 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0476240 AT1G79630.2 36.496 137 71 3 358 478 152 288 4.84e-13 71.6
Msa0476240 AT1G79630.7 36.496 137 71 3 358 478 152 288 4.84e-13 71.6
Msa0476240 AT1G79630.8 36.496 137 71 3 358 478 218 354 5.60e-13 71.6
Msa0476240 AT1G79630.1 36.496 137 71 3 358 478 222 358 6.39e-13 71.6
Msa0476240 AT3G02750.2 28.794 257 118 9 280 474 95 348 1.46e-12 70.5
Msa0476240 AT3G02750.1 28.794 257 118 9 280 474 95 348 1.46e-12 70.5
Msa0476240 AT1G16220.1 28.395 243 124 8 282 478 97 335 3.27e-12 69.3
Msa0476240 AT3G16560.1 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0476240 AT3G16560.4 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0476240 AT3G16560.2 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0476240 AT2G05050.1 34.307 137 67 3 406 534 69 190 4.67e-11 62.8
Msa0476240 AT5G36250.3 27.490 251 126 11 280 478 98 344 5.30e-11 64.7

Find 193 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCCAATTCCCTTTGTTTC+CGG 0.142614 3_3:-80037639 Msa0476240:five_prime_UTR
TGGAACGGTCATCGTGTATT+TGG 0.163856 3_3:-80034766 Msa0476240:CDS
TTCAAGAAAGGTCTAATAAT+TGG 0.183931 3_3:-80035174 Msa0476240:CDS
CGTCTGTGCTGTTTATAAAA+AGG 0.205377 3_3:-80033564 Msa0476240:three_prime_UTR
CACAATTTGAAACAATGATA+TGG 0.225713 3_3:+80034998 None:intergenic
AGATGATGAATGTCTCATTT+TGG 0.235752 3_3:-80034172 Msa0476240:CDS
AGGATGATTGTCGAGATTTA+TGG 0.247331 3_3:-80035143 Msa0476240:CDS
GAGCAGACAATTCATTTCTT+TGG 0.249168 3_3:-80035887 Msa0476240:CDS
TAATAATGTTTAGAAAATTA+AGG 0.257295 3_3:-80037496 Msa0476240:five_prime_UTR
GCAGTGGAACCAACAGTTTC+TGG 0.262096 3_3:+80035045 None:intergenic
GGAACGGTCATCGTGTATTT+GGG 0.262882 3_3:-80034765 Msa0476240:CDS
GAATCATCCTCATCAACTTC+TGG 0.268753 3_3:+80036409 None:intergenic
ACTGAATTACCAGCTATTAA+TGG 0.274602 3_3:+80036685 None:intergenic
AAGTTAGATGCGTCGATAAA+TGG 0.284958 3_3:-80036953 Msa0476240:five_prime_UTR
GATAAATAAGAAGCAAAATT+AGG 0.288235 3_3:-80037391 Msa0476240:intron
CTCGTAGGCGCATACTTCTT+TGG 0.293148 3_3:-80034098 Msa0476240:CDS
CCTCTATAATTGAGGCAAAT+AGG 0.301074 3_3:-80037013 Msa0476240:five_prime_UTR
CGAGGGATGAATGTAATTTC+TGG 0.303563 3_3:+80034201 None:intergenic
GATAGAGTGCTATAAATAAT+TGG 0.304488 3_3:+80036367 None:intergenic
GACATGGCGACACATGTAAA+AGG 0.307100 3_3:+80033672 None:intergenic
AATCCGAGATTGTAATGTTA+TGG 0.311904 3_3:-80033370 Msa0476240:three_prime_UTR
ATTCCTATTCAAATGCTAAA+TGG 0.318655 3_3:-80035947 Msa0476240:CDS
TCATTGTACACTGCTGCATT+GGG 0.322875 3_3:-80033743 Msa0476240:three_prime_UTR
CAATTCTATCTCCTCAATTA+AGG 0.332423 3_3:+80035197 None:intergenic
ATTGGATTGTACCCCACTTT+GGG 0.334782 3_3:-80036041 Msa0476240:CDS
CAAAGCATAGGCTAGTTAAA+AGG 0.337166 3_3:+80036882 None:intergenic
ATATGATATATTATATGATA+TGG 0.347502 3_3:+80037568 None:intergenic
ACTTTATGATCCTCAGATAA+AGG 0.347979 3_3:+80034934 None:intergenic
GCATATTCATCATCTCGATT+TGG 0.348554 3_3:+80034823 None:intergenic
GAACTCAATCGATTATAGTT+TGG 0.348649 3_3:-80033858 Msa0476240:three_prime_UTR
CAAAAGTTGACGATGAAGTT+GGG 0.354429 3_3:-80035095 Msa0476240:CDS
TTGCTGCTTATTGTAGATAT+AGG 0.355200 3_3:-80033703 Msa0476240:three_prime_UTR
AGCTACTCACATGGATGTTT+CGG 0.358015 3_3:-80036644 Msa0476240:CDS
TTCATTGTACACTGCTGCAT+TGG 0.375847 3_3:-80033744 Msa0476240:three_prime_UTR
CTTGCAATGTCAAGGTCTAT+TGG 0.375904 3_3:-80034739 Msa0476240:intron
GATGAATGTAATTTCTGGTT+CGG 0.378751 3_3:+80034206 None:intergenic
CCTATTTGCCTCAATTATAG+AGG 0.379269 3_3:+80037013 None:intergenic
TCTGCAAAGCACGGTTTGAT+AGG 0.384139 3_3:+80033998 None:intergenic
TGAGGATGATTCATTATCAT+TGG 0.384599 3_3:-80036398 Msa0476240:CDS
TTACCATTTAGCATTTGAAT+AGG 0.388620 3_3:+80035944 None:intergenic
ATGAATGTAATTTCTGGTTC+GGG 0.389648 3_3:+80034207 None:intergenic
TCTGGTTCGGGAATAATTGA+TGG 0.390178 3_3:+80034219 None:intergenic
ATGGAATATCTTTACATTCT+CGG 0.390429 3_3:-80036819 Msa0476240:five_prime_UTR
CCAACAGTTTCTGGTGCAAC+AGG 0.410983 3_3:+80035054 None:intergenic
CATTTCTTTGGAGTCTATGA+TGG 0.413040 3_3:-80035875 Msa0476240:CDS
TTGTCGAGATCGTATGCATT+TGG 0.418518 3_3:-80035220 Msa0476240:CDS
CATATCATTGTTTCAAATTG+TGG 0.420325 3_3:-80034997 Msa0476240:CDS
GAGAGAAAATGTGGCAAGAA+TGG 0.422475 3_3:+80037763 None:intergenic
TAGCAGAGTCTTTGTTCTCT+AGG 0.423397 3_3:+80033609 None:intergenic
AATGGACTTGTGGTTATTGT+TGG 0.426016 3_3:-80033318 Msa0476240:three_prime_UTR
ATATCATATAATATATCATA+TGG 0.430153 3_3:-80037566 Msa0476240:five_prime_UTR
AAGTCACTCTCAGAACTTAG+TGG 0.430762 3_3:+80033291 None:intergenic
GCACCGGAAACAAAGGGAAT+TGG 0.431973 3_3:+80037636 None:intergenic
AATTGGATTGTACCCCACTT+TGG 0.433234 3_3:-80036042 Msa0476240:CDS
TCAAAAGTTGACGATGAAGT+TGG 0.435587 3_3:-80035096 Msa0476240:CDS
TTTGGCTAGTGATGGCTTGT+GGG 0.438940 3_3:-80034154 Msa0476240:CDS
CAAAATAATGGGTCTCAGTC+AGG 0.439815 3_3:-80037444 Msa0476240:five_prime_UTR
GGATCATATTGGTGACAATC+TGG 0.441264 3_3:-80036536 Msa0476240:CDS
AGCGAGAATGGTAGTGTTTG+TGG 0.441976 3_3:-80036337 Msa0476240:CDS
TGATGGCCATGGTGGCTCTC+AGG 0.443960 3_3:-80035858 Msa0476240:intron
TTGAGCCTTGGAGATGAAAC+AGG 0.444513 3_3:-80036154 Msa0476240:CDS
AAGAAGAATATACTAGTGTC+TGG 0.447141 3_3:-80036985 Msa0476240:five_prime_UTR
AATCATCCTCATCAACTTCT+GGG 0.449390 3_3:+80036410 None:intergenic
GGGAATTTGTCATTTAGTGC+AGG 0.450678 3_3:+80033798 None:intergenic
AATTGAGAGTTCTAATGAAA+GGG 0.454894 3_3:+80033777 None:intergenic
ACAATTTGAAACAATGATAT+GGG 0.458813 3_3:+80034999 None:intergenic
GCTCAGAGCTGTCCTTAGTA+AGG 0.460695 3_3:-80034062 Msa0476240:CDS
GGTTCTGATGAGGATCATAT+TGG 0.469950 3_3:-80036547 Msa0476240:CDS
AAAATGGGTTGAAAAGAGAA+AGG 0.471807 3_3:+80037740 None:intergenic
AGTTGATGAAGAACTGTAGT+AGG 0.475769 3_3:+80036112 None:intergenic
TATGCATTTGGCCTTAATTG+AGG 0.478714 3_3:-80035208 Msa0476240:CDS
TTCTGTCGAAATTGTTGCTA+GGG 0.480888 3_3:-80036239 Msa0476240:CDS
GCAACAGCATCTTCCATCTC+AGG 0.483340 3_3:+80035992 None:intergenic
GGGAATCGATCTTGCCGCAC+AGG 0.486234 3_3:-80034034 Msa0476240:CDS
CTTTCAAGCCTCTATAATTG+AGG 0.491386 3_3:-80037021 Msa0476240:five_prime_UTR
TGCTTCCTTTCTGCAAAGCA+CGG 0.492118 3_3:+80033989 None:intergenic
CATGTCTAAGATAAAACTAA+AGG 0.492506 3_3:+80036839 None:intergenic
GATGATTCATTATCATTGGA+AGG 0.493253 3_3:-80036394 Msa0476240:CDS
TTGGGGTTCTTGCAATGTCA+AGG 0.493275 3_3:-80034747 Msa0476240:CDS
GCAGTCGTTCCACCTTTGCA+TGG 0.494709 3_3:-80036493 Msa0476240:CDS
CACCTTTGCATGGGAGAGAA+GGG 0.497032 3_3:-80036483 Msa0476240:CDS
CTTCTGTCGAAATTGTTGCT+AGG 0.503030 3_3:-80036240 Msa0476240:CDS
AATGGTAACAGCAAATATGA+TGG 0.504473 3_3:-80035929 Msa0476240:CDS
TGGGGATTTACATCTTTATG+TGG 0.506261 3_3:-80036022 Msa0476240:CDS
TGTTTCGGCAATTAAGATGA+TGG 0.507720 3_3:-80036629 Msa0476240:CDS
GAGATAGAATTGTTCAAGAA+AGG 0.507816 3_3:-80035186 Msa0476240:CDS
CCACCTTTGCATGGGAGAGA+AGG 0.508933 3_3:-80036484 Msa0476240:CDS
AACATCCATGTGAGTAGCTA+TGG 0.509176 3_3:+80036648 None:intergenic
CTATCAGTAACTAGCGAGAA+TGG 0.509678 3_3:-80036349 Msa0476240:CDS
CCTCCATAACATTACAATCT+CGG 0.513116 3_3:+80033367 None:intergenic
AGAGAAAATGTGGCAAGAAT+GGG 0.513843 3_3:+80037764 None:intergenic
TCAAACCGTGCTTTGCAGAA+AGG 0.514004 3_3:-80033994 Msa0476240:CDS
GATTCCCTCTCCCCTTACTA+AGG 0.514122 3_3:+80034050 None:intergenic
TGGAAGTTTCGATCTGTTGT+TGG 0.516745 3_3:-80036933 Msa0476240:five_prime_UTR
ATTTGATATCAGCTCTGCAT+TGG 0.519339 3_3:+80036606 None:intergenic
CCTTCTCTCCCATGCAAAGG+TGG 0.521268 3_3:+80036484 None:intergenic
ATGATATGGTAATTAATACC+TGG 0.524513 3_3:+80037582 None:intergenic
AACAATAGCTACAACGGCAG+TGG 0.527295 3_3:+80035029 None:intergenic
TGGAGGATGGTTGTGGCCAA+AGG 0.529789 3_3:-80033350 Msa0476240:three_prime_UTR
AAATGGGTTGAAAAGAGAAA+GGG 0.530748 3_3:+80037741 None:intergenic
CCGGAAACAAAGGGAATTGG+AGG 0.533170 3_3:+80037639 None:intergenic
TATTAATCCACTGCAGAAGT+TGG 0.536280 3_3:+80033411 None:intergenic
CTCCATCAAAATCCTTGTCT+AGG 0.538252 3_3:+80036726 None:intergenic
AGAGAAAGGGAGAGAAAATG+TGG 0.538612 3_3:+80037754 None:intergenic
TTTGGAGTCTATGATGGCCA+TGG 0.539364 3_3:-80035869 Msa0476240:CDS
CAGTCGTTCCACCTTTGCAT+GGG 0.541895 3_3:-80036492 Msa0476240:CDS
TGATTCATTATCATTGGAAG+GGG 0.543217 3_3:-80036392 Msa0476240:CDS
CTCAGAGCTGTCCTTAGTAA+GGG 0.543482 3_3:-80034061 Msa0476240:CDS
CTTGCTGTAGCATTGAGCCT+TGG 0.543814 3_3:-80036166 Msa0476240:CDS
TCCCCTTCTCTCCCATGCAA+AGG 0.544084 3_3:+80036481 None:intergenic
CATAATATCTGCCTCCACAT+TGG 0.544925 3_3:+80036198 None:intergenic
AAAAGTTGACGATGAAGTTG+GGG 0.546146 3_3:-80035094 Msa0476240:CDS
AAGATGTAAATCCCCAAAGT+GGG 0.548078 3_3:+80036029 None:intergenic
AAAGATGTAAATCCCCAAAG+TGG 0.550847 3_3:+80036028 None:intergenic
ATGATTCATTATCATTGGAA+GGG 0.552164 3_3:-80036393 Msa0476240:CDS
CAATTGAGAGTTCTAATGAA+AGG 0.552643 3_3:+80033776 None:intergenic
AGGTGGTAGCAATTTGGCAT+TGG 0.552712 3_3:-80033544 Msa0476240:three_prime_UTR
CTGTTTAATATCAGAATGGT+GGG 0.552998 3_3:-80036768 Msa0476240:five_prime_UTR
TAGAGAACAAAGACTCTGCT+AGG 0.553255 3_3:-80033607 Msa0476240:three_prime_UTR
GGAATTTGTCATTTAGTGCA+GGG 0.553445 3_3:+80033799 None:intergenic
TTAATACCTGGGTGGGTGAG+TGG 0.553831 3_3:+80037594 None:intergenic
TATGCAAGAATCGAGGCAGC+TGG 0.554886 3_3:-80034805 Msa0476240:CDS
TAATACCTGGGTGGGTGAGT+GGG 0.556673 3_3:+80037595 None:intergenic
TTGTTGAGAGTTAGAAGCAC+CGG 0.558804 3_3:+80037620 None:intergenic
CTGTCCTTAGTAAGGGGAGA+GGG 0.559997 3_3:-80034054 Msa0476240:CDS
GTTAGAAGCACCGGAAACAA+AGG 0.560387 3_3:+80037629 None:intergenic
TAAATCTCGACAATCATCCT+TGG 0.560624 3_3:+80035146 None:intergenic
TCCATGTGAGTAGCTATGGT+TGG 0.562083 3_3:+80036652 None:intergenic
GATTGTAATGTTATGGAGGA+TGG 0.566032 3_3:-80033363 Msa0476240:three_prime_UTR
GTTGCAGTGCCATTAATAGC+TGG 0.566563 3_3:-80036694 Msa0476240:CDS
CTGCAGTGGATTAATATCAC+TGG 0.567275 3_3:-80033404 Msa0476240:three_prime_UTR
TAACTCCTGTTTCATCTCCA+AGG 0.573591 3_3:+80036149 None:intergenic
TGATATGGTAATTAATACCT+GGG 0.574440 3_3:+80037583 None:intergenic
TGATCCTCAGATAAAGGCAT+CGG 0.574547 3_3:+80034940 None:intergenic
TTAGAAGCACCGGAAACAAA+GGG 0.576318 3_3:+80037630 None:intergenic
ACTGTTTAATATCAGAATGG+TGG 0.576445 3_3:-80036769 Msa0476240:five_prime_UTR
GCTGTCCTTAGTAAGGGGAG+AGG 0.582041 3_3:-80034055 Msa0476240:CDS
ACCAATAAAAGTAGTATCAG+CGG 0.584654 3_3:+80036567 None:intergenic
TCGAGAGCGGTTCTATGTCG+TGG 0.584737 3_3:-80034970 Msa0476240:CDS
AAATGTGGCATATCAAAAGC+AGG 0.585030 3_3:-80033252 Msa0476240:three_prime_UTR
CATTGTACACTGCTGCATTG+GGG 0.585440 3_3:-80033742 Msa0476240:three_prime_UTR
AAGGCTCAATGCTACAGCAA+GGG 0.586983 3_3:+80036168 None:intergenic
TTTAGTCCCAGAAGTTGATG+AGG 0.587162 3_3:-80036416 Msa0476240:CDS
AATTCAATTATCCAAAGCAT+AGG 0.587802 3_3:+80036870 None:intergenic
AACTGTAGTAGGCAACGGTA+CGG 0.588404 3_3:+80036123 None:intergenic
CAAATATGATGGAATGAACA+AGG 0.590150 3_3:-80035918 Msa0476240:CDS
CAAGGCTCAATGCTACAGCA+AGG 0.593101 3_3:+80036167 None:intergenic
ATGGTAATTAATACCTGGGT+GGG 0.594789 3_3:+80037587 None:intergenic
AGGCTCAATGCTACAGCAAG+GGG 0.598186 3_3:+80036169 None:intergenic
AATCGAGGCAGCTGGTGGCA+AGG 0.599028 3_3:-80034797 Msa0476240:CDS
ACCTTTGCATGGGAGAGAAG+GGG 0.600702 3_3:-80036482 Msa0476240:CDS
CAGAGTCTTTGTTCTCTAGG+AGG 0.605322 3_3:+80033612 None:intergenic
ACTGTTTAATGAATTGCACT+TGG 0.606549 3_3:-80033902 Msa0476240:three_prime_UTR
CAATCTCGGATTCAAAGTCA+TGG 0.607115 3_3:+80033381 None:intergenic
GAACGGTCATCGTGTATTTG+GGG 0.608699 3_3:-80034764 Msa0476240:CDS
CTGTTTAATGAATTGCACTT+GGG 0.610280 3_3:-80033901 Msa0476240:three_prime_UTR
AAAGGGGTGAGTGGAACAGT+TGG 0.611140 3_3:-80036079 Msa0476240:CDS
TTGGATTGTACCCCACTTTG+GGG 0.611309 3_3:-80036040 Msa0476240:CDS
AATGTTATGGAGGATGGTTG+TGG 0.612565 3_3:-80033357 Msa0476240:three_prime_UTR
CCGAGATTGTAATGTTATGG+AGG 0.612876 3_3:-80033367 Msa0476240:three_prime_UTR
GACAATCTGGACGACGAAGT+TGG 0.615948 3_3:-80036523 Msa0476240:CDS
AAGTTTCGATCTGTTGTTGG+TGG 0.617708 3_3:-80036930 Msa0476240:five_prime_UTR
TCTAATAATTGGAAGTACCA+AGG 0.617790 3_3:-80035163 Msa0476240:CDS
GAATATACTAGTGTCTGGAA+AGG 0.618012 3_3:-80036980 Msa0476240:five_prime_UTR
TCAGAGCTGTCCTTAGTAAG+GGG 0.625225 3_3:-80034060 Msa0476240:CDS
ATTGAGAGTTCTAATGAAAG+GGG 0.626092 3_3:+80033778 None:intergenic
GCAAGAATCGAGGCAGCTGG+TGG 0.628520 3_3:-80034802 Msa0476240:CDS
GTCTAAGATAAAACTAAAGG+AGG 0.629435 3_3:+80036842 None:intergenic
AGGCATGCGACTTAGCTCGT+AGG 0.630770 3_3:-80034113 Msa0476240:CDS
ATGTGGAAAGAGACCTGAGA+TGG 0.635507 3_3:-80036005 Msa0476240:CDS
CAACACCCACTCACCCACCC+AGG 0.636828 3_3:-80037600 Msa0476240:five_prime_UTR
GGGTGAGTGGAACAGTTGGT+CGG 0.637836 3_3:-80036075 Msa0476240:CDS
GGAGTCTATGATGGCCATGG+TGG 0.638051 3_3:-80035866 Msa0476240:CDS
TCCAACCATAGCTACTCACA+TGG 0.640235 3_3:-80036653 Msa0476240:CDS
ACTTTACCTGAGAGCCACCA+TGG 0.641177 3_3:+80035852 None:intergenic
GTAACTGTTTAATATCAGAA+TGG 0.641889 3_3:-80036772 Msa0476240:five_prime_UTR
AGAACCGATGCCTTTATCTG+AGG 0.645533 3_3:-80034944 Msa0476240:CDS
CCTGTTGCACCAGAAACTGT+TGG 0.648287 3_3:-80035054 Msa0476240:CDS
TTTCGACAAGTCCAATGTGG+AGG 0.649055 3_3:-80036209 Msa0476240:CDS
TAGTTATATGAACAGAAATG+TGG 0.650063 3_3:-80033267 Msa0476240:three_prime_UTR
TGAAGAACTGTAGTAGGCAA+CGG 0.652355 3_3:+80036118 None:intergenic
TGAACAAACAATAGCTACAA+CGG 0.653330 3_3:+80035023 None:intergenic
AAATTGTGGTGATTCGAGAG+CGG 0.664718 3_3:-80034983 Msa0476240:CDS
GGCAAGGTGATACAGTGGAA+CGG 0.665237 3_3:-80034781 Msa0476240:CDS
CTGACTATGAGTCACCGACA+TGG 0.671416 3_3:+80033656 None:intergenic
AAAGTTGACGATGAAGTTGG+GGG 0.677025 3_3:-80035093 Msa0476240:CDS
TGATGAATATGCAAGAATCG+AGG 0.678624 3_3:-80034812 Msa0476240:CDS
CTGGTGGCAAGGTGATACAG+TGG 0.681355 3_3:-80034786 Msa0476240:CDS
GTACTCTGCAGCTGCCTGTG+CGG 0.683375 3_3:+80034020 None:intergenic
AGATGTAAATCCCCAAAGTG+GGG 0.684956 3_3:+80036030 None:intergenic
GGATGTCATGACAAATGAAG+AGG 0.700561 3_3:-80034133 Msa0476240:CDS
ATGCTGTTGCGATTGCACCT+CGG 0.707014 3_3:-80035979 Msa0476240:CDS
TATGGTAATTAATACCTGGG+TGG 0.707968 3_3:+80037586 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGATATATTATATGATA+TGG + chr3_3:80033438-80033457 None:intergenic 10.0%
!! ATATCATATAATATATCATA+TGG - chr3_3:80033437-80033456 Msa0476240:three_prime_UTR 10.0%
!! TAATAATGTTTAGAAAATTA+AGG - chr3_3:80033507-80033526 Msa0476240:three_prime_UTR 10.0%
!!! TTTTTTGTTAATCAAAATAA+TGG - chr3_3:80033547-80033566 Msa0476240:three_prime_UTR 10.0%
!!! TTTTTGTTAATCAAAATAAT+GGG - chr3_3:80033548-80033567 Msa0476240:three_prime_UTR 10.0%
!!! AAAAGAAACTTTTTAATGAA+AGG + chr3_3:80033289-80033308 None:intergenic 15.0%
!!! TGAAGATAATTTGTATTTTA+GGG - chr3_3:80034707-80034726 Msa0476240:intron 15.0%
!!! TTTATTTTATTTTTAGAGTC+TGG - chr3_3:80035174-80035193 Msa0476240:CDS 15.0%
!! TAAATTTGTGTTTATGATAA+GGG - chr3_3:80035551-80035570 Msa0476240:intron 15.0%
!!! ATTGATTTTTGATTTTGATA+TGG - chr3_3:80036154-80036173 Msa0476240:CDS 15.0%
!! TTGAAAATACAATTAAAATG+AGG + chr3_3:80036302-80036321 None:intergenic 15.0%
!!! CATTTTAATTGTATTTTCAA+TGG - chr3_3:80036302-80036321 Msa0476240:CDS 15.0%
!! TTAGTAATTTATTTAAGCTT+AGG + chr3_3:80036696-80036715 None:intergenic 15.0%
!!! CTTTTTAATGAAAGGAAAAT+GGG + chr3_3:80033281-80033300 None:intergenic 20.0%
!!! ACTTTTTAATGAAAGGAAAA+TGG + chr3_3:80033282-80033301 None:intergenic 20.0%
!! GATAAATAAGAAGCAAAATT+AGG - chr3_3:80033612-80033631 Msa0476240:three_prime_UTR 20.0%
!! ACAATTATTCAATGAATGAA+AGG + chr3_3:80033667-80033686 None:intergenic 20.0%
!!! ATTTTGTGTTTAATGAATGT+TGG - chr3_3:80033876-80033895 Msa0476240:three_prime_UTR 20.0%
!!! CTGAAGATAATTTGTATTTT+AGG - chr3_3:80034706-80034725 Msa0476240:intron 20.0%
!! ATAAGTTAAAAACAAGTCAT+GGG + chr3_3:80035285-80035304 None:intergenic 20.0%
!! AATAAGTTAAAAACAAGTCA+TGG + chr3_3:80035286-80035305 None:intergenic 20.0%
!! AGCATTAAATGCAATAAATA+AGG - chr3_3:80035451-80035470 Msa0476240:intron 20.0%
!! GCATTAAATGCAATAAATAA+GGG - chr3_3:80035452-80035471 Msa0476240:intron 20.0%
!!! CACAAATTTAGAGATTTTTT+TGG + chr3_3:80035541-80035560 None:intergenic 20.0%
!! CTAAATTTGTGTTTATGATA+AGG - chr3_3:80035550-80035569 Msa0476240:intron 20.0%
!!! ACAATTTGAAACAATGATAT+GGG + chr3_3:80036007-80036026 None:intergenic 20.0%
!! TGCATTGTTTATATATTTGA+TGG - chr3_3:80036404-80036423 Msa0476240:CDS 20.0%
!! GTTTATATATTTGATGGAAA+TGG - chr3_3:80036410-80036429 Msa0476240:CDS 20.0%
!!! ATTTTGAAAATTACTACCTT+TGG - chr3_3:80036446-80036465 Msa0476240:CDS 20.0%
!!! CAGAATAGTTTATTTTTATC+AGG - chr3_3:80036537-80036556 Msa0476240:CDS 20.0%
! TGATATGGTAATTAATACCT+GGG + chr3_3:80033423-80033442 None:intergenic 25.0%
! ATGATATGGTAATTAATACC+TGG + chr3_3:80033424-80033443 None:intergenic 25.0%
! CATTGAATAATTGTTATCAC+TGG - chr3_3:80033673-80033692 Msa0476240:three_prime_UTR 25.0%
! AAGAAAGAAGGAACAAAAAA+GGG + chr3_3:80033855-80033874 None:intergenic 25.0%
! AAACACAAAATCAAGAAAGA+AGG + chr3_3:80033867-80033886 None:intergenic 25.0%
!! TTGGTCTCTATAATTGTTTT+AGG - chr3_3:80033895-80033914 Msa0476240:three_prime_UTR 25.0%
! AATTCAATTATCCAAAGCAT+AGG + chr3_3:80034136-80034155 None:intergenic 25.0%
!! CATGTCTAAGATAAAACTAA+AGG + chr3_3:80034167-80034186 None:intergenic 25.0%
!!! CTTTAGTTTTATCTTAGACA+TGG - chr3_3:80034165-80034184 Msa0476240:CDS 25.0%
! ATGGAATATCTTTACATTCT+CGG - chr3_3:80034184-80034203 Msa0476240:CDS 25.0%
! GTAACTGTTTAATATCAGAA+TGG - chr3_3:80034231-80034250 Msa0476240:CDS 25.0%
!!! TTTTTTGTATTACCTAGACA+AGG - chr3_3:80034265-80034284 Msa0476240:intron 25.0%
! ATGATTCATTATCATTGGAA+GGG - chr3_3:80034610-80034629 Msa0476240:intron 25.0%
!! GATAGAGTGCTATAAATAAT+TGG + chr3_3:80034639-80034658 None:intergenic 25.0%
! ATTCCTATTCAAATGCTAAA+TGG - chr3_3:80035056-80035075 Msa0476240:CDS 25.0%
! TTACCATTTAGCATTTGAAT+AGG + chr3_3:80035062-80035081 None:intergenic 25.0%
!!! TTTTATTTTTAGAGTCTGGT+TGG - chr3_3:80035178-80035197 Msa0476240:CDS 25.0%
!!! ATTACTTTTGAGTCTGTTTA+AGG - chr3_3:80035232-80035251 Msa0476240:CDS 25.0%
!!! TTACTTTTGAGTCTGTTTAA+GGG - chr3_3:80035233-80035252 Msa0476240:CDS 25.0%
!!! TGATGTTTTTTGGTTTTTGA+GGG + chr3_3:80035360-80035379 None:intergenic 25.0%
!!! TTGATGTTTTTTGGTTTTTG+AGG + chr3_3:80035361-80035380 None:intergenic 25.0%
!!! GCATTGATTTTGATGTTTTT+TGG + chr3_3:80035370-80035389 None:intergenic 25.0%
! TTTATACAAATATACCCTCA+TGG - chr3_3:80035418-80035437 Msa0476240:intron 25.0%
! AACAAAAAAATGCAAACCAT+TGG + chr3_3:80035715-80035734 None:intergenic 25.0%
!!! AATGGTTTGCATTTTTTTGT+TGG - chr3_3:80035714-80035733 Msa0476240:intron 25.0%
! TTCAAGAAAGGTCTAATAAT+TGG - chr3_3:80035829-80035848 Msa0476240:intron 25.0%
!! CACAATTTGAAACAATGATA+TGG + chr3_3:80036008-80036027 None:intergenic 25.0%
! CATATCATTGTTTCAAATTG+TGG - chr3_3:80036006-80036025 Msa0476240:CDS 25.0%
! TTTATATCTTACCAATGCAT+TGG - chr3_3:80036580-80036599 Msa0476240:CDS 25.0%
! AGTAAAAAAGATGAGAACAT+TGG + chr3_3:80036670-80036689 None:intergenic 25.0%
!! AATTGAGAGTTCTAATGAAA+GGG + chr3_3:80037229-80037248 None:intergenic 25.0%
! GAGTTTACTTAAAAATTGTG+CGG + chr3_3:80037523-80037542 None:intergenic 25.0%
!!! CTCATATCATTGTGTTTTTT+TGG - chr3_3:80037540-80037559 Msa0476240:five_prime_UTR 25.0%
! TAGTTATATGAACAGAAATG+TGG - chr3_3:80037736-80037755 Msa0476240:five_prime_UTR 25.0%
!! AAATGGGTTGAAAAGAGAAA+GGG + chr3_3:80033265-80033284 None:intergenic 30.0%
!! AAAATGGGTTGAAAAGAGAA+AGG + chr3_3:80033266-80033285 None:intergenic 30.0%
CAAGAAAGAAGGAACAAAAA+AGG + chr3_3:80033856-80033875 None:intergenic 30.0%
AAGAAGAATATACTAGTGTC+TGG - chr3_3:80034018-80034037 Msa0476240:CDS 30.0%
! GTCTAAGATAAAACTAAAGG+AGG + chr3_3:80034164-80034183 None:intergenic 30.0%
ACTGTTTAATATCAGAATGG+TGG - chr3_3:80034234-80034253 Msa0476240:CDS 30.0%
CTGTTTAATATCAGAATGGT+GGG - chr3_3:80034235-80034254 Msa0476240:CDS 30.0%
ACTGAATTACCAGCTATTAA+TGG + chr3_3:80034321-80034340 None:intergenic 30.0%
ACCAATAAAAGTAGTATCAG+CGG + chr3_3:80034439-80034458 None:intergenic 30.0%
!!! TACTTTTATTGGTTCTGATG+AGG - chr3_3:80034446-80034465 Msa0476240:intron 30.0%
TGAGGATGATTCATTATCAT+TGG - chr3_3:80034605-80034624 Msa0476240:intron 30.0%
GATGATTCATTATCATTGGA+AGG - chr3_3:80034609-80034628 Msa0476240:intron 30.0%
TGATTCATTATCATTGGAAG+GGG - chr3_3:80034611-80034630 Msa0476240:intron 30.0%
ATCAACTGCCTCTTAAAAAA+GGG - chr3_3:80034907-80034926 Msa0476240:intron 30.0%
AATGGTAACAGCAAATATGA+TGG - chr3_3:80035074-80035093 Msa0476240:CDS 30.0%
! CAAATATGATGGAATGAACA+AGG - chr3_3:80035085-80035104 Msa0476240:CDS 30.0%
! TGCTTCAAAATTTTCCATGA+GGG + chr3_3:80035435-80035454 None:intergenic 30.0%
! ATGCTTCAAAATTTTCCATG+AGG + chr3_3:80035436-80035455 None:intergenic 30.0%
ATAACAAAAGATACTACCTC+CGG + chr3_3:80035578-80035597 None:intergenic 30.0%
AAAGCAAGCTCAATGTTAAA+AGG + chr3_3:80035742-80035761 None:intergenic 30.0%
!! TGAGCTTGCTTTTCTTTTTT+AGG - chr3_3:80035750-80035769 Msa0476240:intron 30.0%
CAATTCTATCTCCTCAATTA+AGG + chr3_3:80035809-80035828 None:intergenic 30.0%
GAGATAGAATTGTTCAAGAA+AGG - chr3_3:80035817-80035836 Msa0476240:intron 30.0%
!! TCTAATAATTGGAAGTACCA+AGG - chr3_3:80035840-80035859 Msa0476240:intron 30.0%
TGAACAAACAATAGCTACAA+CGG + chr3_3:80035983-80036002 None:intergenic 30.0%
ACTTTATGATCCTCAGATAA+AGG + chr3_3:80036072-80036091 None:intergenic 30.0%
TATCCATCTTAGTTTATGAG+TGG - chr3_3:80036360-80036379 Msa0476240:CDS 30.0%
TAACCACTCATAAACTAAGA+TGG + chr3_3:80036366-80036385 None:intergenic 30.0%
TTATGAGTGGTTAGAAAATG+TGG - chr3_3:80036373-80036392 Msa0476240:CDS 30.0%
TATATAAACAATGCAACCGA+TGG + chr3_3:80036399-80036418 None:intergenic 30.0%
ATATTTGATGGAAATGGTGT+CGG - chr3_3:80036416-80036435 Msa0476240:CDS 30.0%
ATGACATGAAAATACTCCAA+AGG + chr3_3:80036465-80036484 None:intergenic 30.0%
!! CTAGCTTTATGGTCATATAA+TGG + chr3_3:80036629-80036648 None:intergenic 30.0%
!! AATTAGGCATTCTAGCTTTA+TGG + chr3_3:80036640-80036659 None:intergenic 30.0%
TTATCATTGTTGTGACTTTC+AGG - chr3_3:80036745-80036764 Msa0476240:five_prime_UTR 30.0%
!! ATGAATGTAATTTCTGGTTC+GGG + chr3_3:80036799-80036818 None:intergenic 30.0%
!! GATGAATGTAATTTCTGGTT+CGG + chr3_3:80036800-80036819 None:intergenic 30.0%
! AGATGATGAATGTCTCATTT+TGG - chr3_3:80036831-80036850 Msa0476240:five_prime_UTR 30.0%
ACTGTTTAATGAATTGCACT+TGG - chr3_3:80037101-80037120 Msa0476240:intron 30.0%
CTGTTTAATGAATTGCACTT+GGG - chr3_3:80037102-80037121 Msa0476240:intron 30.0%
GAACTCAATCGATTATAGTT+TGG - chr3_3:80037145-80037164 Msa0476240:intron 30.0%
! ATTGAGAGTTCTAATGAAAG+GGG + chr3_3:80037228-80037247 None:intergenic 30.0%
! CAATTGAGAGTTCTAATGAA+AGG + chr3_3:80037230-80037249 None:intergenic 30.0%
! TTGCTGCTTATTGTAGATAT+AGG - chr3_3:80037300-80037319 Msa0476240:intron 30.0%
ATAAAAAGGTGGTAGCAATT+TGG - chr3_3:80037453-80037472 Msa0476240:five_prime_UTR 30.0%
AATCCGAGATTGTAATGTTA+TGG - chr3_3:80037633-80037652 Msa0476240:five_prime_UTR 30.0%
GTCCATTTACAAAAAACCTT+TGG + chr3_3:80037672-80037691 None:intergenic 30.0%
!!! GTTTTTTGTAAATGGACTTG+TGG - chr3_3:80037675-80037694 Msa0476240:five_prime_UTR 30.0%
ATGGTAATTAATACCTGGGT+GGG + chr3_3:80033419-80033438 None:intergenic 35.0%
TATGGTAATTAATACCTGGG+TGG + chr3_3:80033420-80033439 None:intergenic 35.0%
CTTTCAAGCCTCTATAATTG+AGG - chr3_3:80033982-80034001 Msa0476240:CDS 35.0%
CCTATTTGCCTCAATTATAG+AGG + chr3_3:80033993-80034012 None:intergenic 35.0%
CCTCTATAATTGAGGCAAAT+AGG - chr3_3:80033990-80034009 Msa0476240:CDS 35.0%
GAATATACTAGTGTCTGGAA+AGG - chr3_3:80034023-80034042 Msa0476240:CDS 35.0%
! AAGTTAGATGCGTCGATAAA+TGG - chr3_3:80034050-80034069 Msa0476240:CDS 35.0%
! CAAAGCATAGGCTAGTTAAA+AGG + chr3_3:80034124-80034143 None:intergenic 35.0%
!! CTTTTAACTAGCCTATGCTT+TGG - chr3_3:80034122-80034141 Msa0476240:CDS 35.0%
! TACCTAGACAAGGATTTTGA+TGG - chr3_3:80034275-80034294 Msa0476240:intron 35.0%
TGTTTCGGCAATTAAGATGA+TGG - chr3_3:80034374-80034393 Msa0476240:intron 35.0%
ATTTGATATCAGCTCTGCAT+TGG + chr3_3:80034400-80034419 None:intergenic 35.0%
!! TCCGCTGATACTACTTTTAT+TGG - chr3_3:80034435-80034454 Msa0476240:intron 35.0%
AATCATCCTCATCAACTTCT+GGG + chr3_3:80034596-80034615 None:intergenic 35.0%
TTCTGTCGAAATTGTTGCTA+GGG - chr3_3:80034764-80034783 Msa0476240:CDS 35.0%
!! AGTTGATGAAGAACTGTAGT+AGG + chr3_3:80034894-80034913 None:intergenic 35.0%
CATCAACTGCCTCTTAAAAA+AGG - chr3_3:80034906-80034925 Msa0476240:intron 35.0%
TCAACTGCCTCTTAAAAAAG+GGG - chr3_3:80034908-80034927 Msa0476240:intron 35.0%
AAGATGTAAATCCCCAAAGT+GGG + chr3_3:80034977-80034996 None:intergenic 35.0%
AAAGATGTAAATCCCCAAAG+TGG + chr3_3:80034978-80034997 None:intergenic 35.0%
TGGGGATTTACATCTTTATG+TGG - chr3_3:80034981-80035000 Msa0476240:CDS 35.0%
! ATAGGAATTTTCAACATCCG+AGG + chr3_3:80035044-80035063 None:intergenic 35.0%
GAGCAGACAATTCATTTCTT+TGG - chr3_3:80035116-80035135 Msa0476240:CDS 35.0%
!! CATTTCTTTGGAGTCTATGA+TGG - chr3_3:80035128-80035147 Msa0476240:CDS 35.0%
!!! TTTTTAGAGTCTGGTTGGAT+TGG - chr3_3:80035183-80035202 Msa0476240:CDS 35.0%
GCAATAAATAAGGGAGAGAA+AGG - chr3_3:80035461-80035480 Msa0476240:intron 35.0%
TTGTGTTTATGATAAGGGAC+CGG - chr3_3:80035556-80035575 Msa0476240:intron 35.0%
ATGCAAACCATTGGATACAA+GGG + chr3_3:80035706-80035725 None:intergenic 35.0%
AATGCAAACCATTGGATACA+AGG + chr3_3:80035707-80035726 None:intergenic 35.0%
!! TATGCATTTGGCCTTAATTG+AGG - chr3_3:80035795-80035814 Msa0476240:intron 35.0%
TAAATCTCGACAATCATCCT+TGG + chr3_3:80035860-80035879 None:intergenic 35.0%
AGGATGATTGTCGAGATTTA+TGG - chr3_3:80035860-80035879 Msa0476240:CDS 35.0%
TCAAAAGTTGACGATGAAGT+TGG - chr3_3:80035907-80035926 Msa0476240:CDS 35.0%
CAAAAGTTGACGATGAAGTT+GGG - chr3_3:80035908-80035927 Msa0476240:CDS 35.0%
AAAAGTTGACGATGAAGTTG+GGG - chr3_3:80035909-80035928 Msa0476240:CDS 35.0%
ACGTGCAAAACTATTACTGA+AGG + chr3_3:80036101-80036120 None:intergenic 35.0%
GCATATTCATCATCTCGATT+TGG + chr3_3:80036183-80036202 None:intergenic 35.0%
TGATGAATATGCAAGAATCG+AGG - chr3_3:80036191-80036210 Msa0476240:CDS 35.0%
TTTCAATGGCGATAGTTACA+AGG - chr3_3:80036316-80036335 Msa0476240:CDS 35.0%
TATAAGCTAAGCCAATGCAT+TGG + chr3_3:80036594-80036613 None:intergenic 35.0%
GAACATTGGAAGTCACAATT+AGG + chr3_3:80036656-80036675 None:intergenic 35.0%
CTTCTTTGGCACAAGAAAAA+TGG - chr3_3:80036919-80036938 Msa0476240:five_prime_UTR 35.0%
! TGGCTCAGTAATTTTTCATC+TGG - chr3_3:80037165-80037184 Msa0476240:intron 35.0%
! GGCTCAGTAATTTTTCATCT+GGG - chr3_3:80037166-80037185 Msa0476240:intron 35.0%
! TAATTTTTCATCTGGGCACA+TGG - chr3_3:80037173-80037192 Msa0476240:intron 35.0%
! GGAATTTGTCATTTAGTGCA+GGG + chr3_3:80037207-80037226 None:intergenic 35.0%
!! CGTCTGTGCTGTTTATAAAA+AGG - chr3_3:80037439-80037458 Msa0476240:five_prime_UTR 35.0%
!! CTGTGCTGTTTATAAAAAGG+TGG - chr3_3:80037442-80037461 Msa0476240:five_prime_UTR 35.0%
TATTAATCCACTGCAGAAGT+TGG + chr3_3:80037595-80037614 None:intergenic 35.0%
CCTCCATAACATTACAATCT+CGG + chr3_3:80037639-80037658 None:intergenic 35.0%
GATTGTAATGTTATGGAGGA+TGG - chr3_3:80037640-80037659 Msa0476240:five_prime_UTR 35.0%
!!! GGCCAAAGGTTTTTTGTAAA+TGG - chr3_3:80037667-80037686 Msa0476240:five_prime_UTR 35.0%
! AATGGACTTGTGGTTATTGT+TGG - chr3_3:80037685-80037704 Msa0476240:five_prime_UTR 35.0%
AAATGTGGCATATCAAAAGC+AGG - chr3_3:80037751-80037770 Msa0476240:five_prime_UTR 35.0%
AGAGAAAGGGAGAGAAAATG+TGG + chr3_3:80033252-80033271 None:intergenic 40.0%
!! TTAGAAGCACCGGAAACAAA+GGG + chr3_3:80033376-80033395 None:intergenic 40.0%
! TTGTTGAGAGTTAGAAGCAC+CGG + chr3_3:80033386-80033405 None:intergenic 40.0%
!! CAAAATAATGGGTCTCAGTC+AGG - chr3_3:80033559-80033578 Msa0476240:three_prime_UTR 40.0%
ATATGTGTTACCTCAGATCC+AGG - chr3_3:80033705-80033724 Msa0476240:three_prime_UTR 40.0%
TCCTGAGACTTTACTTCTTC+TGG - chr3_3:80033814-80033833 Msa0476240:three_prime_UTR 40.0%
TCCAGAAGAAGTAAAGTCTC+AGG + chr3_3:80033818-80033837 None:intergenic 40.0%
TGGAAGTTTCGATCTGTTGT+TGG - chr3_3:80034070-80034089 Msa0476240:CDS 40.0%
AAGTTTCGATCTGTTGTTGG+TGG - chr3_3:80034073-80034092 Msa0476240:CDS 40.0%
CTCCATCAAAATCCTTGTCT+AGG + chr3_3:80034280-80034299 None:intergenic 40.0%
!! CTAGACAAGGATTTTGATGG+AGG - chr3_3:80034278-80034297 Msa0476240:intron 40.0%
AACATCCATGTGAGTAGCTA+TGG + chr3_3:80034358-80034377 None:intergenic 40.0%
AGCTACTCACATGGATGTTT+CGG - chr3_3:80034359-80034378 Msa0476240:intron 40.0%
! GGTTCTGATGAGGATCATAT+TGG - chr3_3:80034456-80034475 Msa0476240:intron 40.0%
! GGATCATATTGGTGACAATC+TGG - chr3_3:80034467-80034486 Msa0476240:intron 40.0%
!! TTTAGTCCCAGAAGTTGATG+AGG - chr3_3:80034587-80034606 Msa0476240:intron 40.0%
GAATCATCCTCATCAACTTC+TGG + chr3_3:80034597-80034616 None:intergenic 40.0%
CTATCAGTAACTAGCGAGAA+TGG - chr3_3:80034654-80034673 Msa0476240:intron 40.0%
!!! TTTTAGGGCAAAGAGTTCGA+TGG - chr3_3:80034722-80034741 Msa0476240:intron 40.0%
CTTCTGTCGAAATTGTTGCT+AGG - chr3_3:80034763-80034782 Msa0476240:CDS 40.0%
! TGTTTTCGACAAGTCCAATG+TGG - chr3_3:80034791-80034810 Msa0476240:CDS 40.0%
CATAATATCTGCCTCCACAT+TGG + chr3_3:80034808-80034827 None:intergenic 40.0%
TAACTCCTGTTTCATCTCCA+AGG + chr3_3:80034857-80034876 None:intergenic 40.0%
TGAAGAACTGTAGTAGGCAA+CGG + chr3_3:80034888-80034907 None:intergenic 40.0%
!! TGGTCGGAGTGTTTTTGAAT+TGG - chr3_3:80034944-80034963 Msa0476240:CDS 40.0%
AATTGGATTGTACCCCACTT+TGG - chr3_3:80034961-80034980 Msa0476240:CDS 40.0%
ATTGGATTGTACCCCACTTT+GGG - chr3_3:80034962-80034981 Msa0476240:CDS 40.0%
AGATGTAAATCCCCAAAGTG+GGG + chr3_3:80034976-80034995 None:intergenic 40.0%
!! TTGGCTTGTTTGAGCTTATC+TGG - chr3_3:80035202-80035221 Msa0476240:CDS 40.0%
CTTATTTCCACAAGCTCTGT+TGG - chr3_3:80035300-80035319 Msa0476240:intron 40.0%
AAGCTCTGTTGGATTGCTTA+TGG - chr3_3:80035311-80035330 Msa0476240:intron 40.0%
TTGTCGAGATCGTATGCATT+TGG - chr3_3:80035783-80035802 Msa0476240:intron 40.0%
AAAGTTGACGATGAAGTTGG+GGG - chr3_3:80035910-80035929 Msa0476240:CDS 40.0%
GAAGTTGGGGGAAAAGTTAA+CGG - chr3_3:80035922-80035941 Msa0476240:CDS 40.0%
AAATTGTGGTGATTCGAGAG+CGG - chr3_3:80036020-80036039 Msa0476240:CDS 40.0%
! TGATCCTCAGATAAAGGCAT+CGG + chr3_3:80036066-80036085 None:intergenic 40.0%
CTTGCAATGTCAAGGTCTAT+TGG - chr3_3:80036264-80036283 Msa0476240:CDS 40.0%
TGGTTAGAAAATGTGGCCAT+CGG - chr3_3:80036380-80036399 Msa0476240:CDS 40.0%
!! TCTGGTTCGGGAATAATTGA+TGG + chr3_3:80036787-80036806 None:intergenic 40.0%
CGAGGGATGAATGTAATTTC+TGG + chr3_3:80036805-80036824 None:intergenic 40.0%
! ATTCATCATCTTTTGCGCGA+GGG + chr3_3:80036822-80036841 None:intergenic 40.0%
!!! TGTCTCATTTTGGCTAGTGA+TGG - chr3_3:80036841-80036860 Msa0476240:five_prime_UTR 40.0%
GGATGTCATGACAAATGAAG+AGG - chr3_3:80036870-80036889 Msa0476240:five_prime_UTR 40.0%
! GGGAATTTGTCATTTAGTGC+AGG + chr3_3:80037208-80037227 None:intergenic 40.0%
TTCATTGTACACTGCTGCAT+TGG - chr3_3:80037259-80037278 Msa0476240:intron 40.0%
TCATTGTACACTGCTGCATT+GGG - chr3_3:80037260-80037279 Msa0476240:intron 40.0%
! TTTTACATGTGTCGCCATGT+CGG - chr3_3:80037333-80037352 Msa0476240:intron 40.0%
TAGCAGAGTCTTTGTTCTCT+AGG + chr3_3:80037397-80037416 None:intergenic 40.0%
TAGAGAACAAAGACTCTGCT+AGG - chr3_3:80037396-80037415 Msa0476240:five_prime_UTR 40.0%
!! CTGCAGTGGATTAATATCAC+TGG - chr3_3:80037599-80037618 Msa0476240:five_prime_UTR 40.0%
CAATCTCGGATTCAAAGTCA+TGG + chr3_3:80037625-80037644 None:intergenic 40.0%
CCGAGATTGTAATGTTATGG+AGG - chr3_3:80037636-80037655 Msa0476240:five_prime_UTR 40.0%
AATGTTATGGAGGATGGTTG+TGG - chr3_3:80037646-80037665 Msa0476240:five_prime_UTR 40.0%
AAGTCACTCTCAGAACTTAG+TGG + chr3_3:80037715-80037734 None:intergenic 40.0%
! CCTCCAATTCCCTTTGTTTC+CGG - chr3_3:80033364-80033383 Msa0476240:three_prime_UTR 45.0%
!! GTTAGAAGCACCGGAAACAA+AGG + chr3_3:80033377-80033396 None:intergenic 45.0%
TTACCTCAGATCCAGGTAAC+TGG - chr3_3:80033712-80033731 Msa0476240:three_prime_UTR 45.0%
ACATAAGACCACCAGTTACC+TGG + chr3_3:80033726-80033745 None:intergenic 45.0%
! GTTGCAGTGCCATTAATAGC+TGG - chr3_3:80034309-80034328 Msa0476240:intron 45.0%
TCCAACCATAGCTACTCACA+TGG - chr3_3:80034350-80034369 Msa0476240:intron 45.0%
TCCATGTGAGTAGCTATGGT+TGG + chr3_3:80034354-80034373 None:intergenic 45.0%
! AGCGAGAATGGTAGTGTTTG+TGG - chr3_3:80034666-80034685 Msa0476240:intron 45.0%
TTTCGACAAGTCCAATGTGG+AGG - chr3_3:80034794-80034813 Msa0476240:CDS 45.0%
AAGGCTCAATGCTACAGCAA+GGG + chr3_3:80034838-80034857 None:intergenic 45.0%
TTGAGCCTTGGAGATGAAAC+AGG - chr3_3:80034849-80034868 Msa0476240:intron 45.0%
AACTGTAGTAGGCAACGGTA+CGG + chr3_3:80034883-80034902 None:intergenic 45.0%
!!! CCACTCACCCCTTTTTTAAG+AGG + chr3_3:80034918-80034937 None:intergenic 45.0%
CCTCTTAAAAAAGGGGTGAG+TGG - chr3_3:80034915-80034934 Msa0476240:intron 45.0%
TTGGATTGTACCCCACTTTG+GGG - chr3_3:80034963-80034982 Msa0476240:CDS 45.0%
ATGTGGAAAGAGACCTGAGA+TGG - chr3_3:80034998-80035017 Msa0476240:CDS 45.0%
! TTTGGAGTCTATGATGGCCA+TGG - chr3_3:80035134-80035153 Msa0476240:CDS 45.0%
AAGCAATCCAACAGAGCTTG+TGG + chr3_3:80035310-80035329 None:intergenic 45.0%
TGTTTATGATAAGGGACCGG+AGG - chr3_3:80035559-80035578 Msa0476240:intron 45.0%
CATGTGACCCTTGTATCCAA+TGG - chr3_3:80035696-80035715 Msa0476240:intron 45.0%
AACAATAGCTACAACGGCAG+TGG + chr3_3:80035977-80035996 None:intergenic 45.0%
AGAACCGATGCCTTTATCTG+AGG - chr3_3:80036059-80036078 Msa0476240:CDS 45.0%
TGGAACGGTCATCGTGTATT+TGG - chr3_3:80036237-80036256 Msa0476240:CDS 45.0%
GGAACGGTCATCGTGTATTT+GGG - chr3_3:80036238-80036257 Msa0476240:CDS 45.0%
GAACGGTCATCGTGTATTTG+GGG - chr3_3:80036239-80036258 Msa0476240:CDS 45.0%
TTGGGGTTCTTGCAATGTCA+AGG - chr3_3:80036256-80036275 Msa0476240:CDS 45.0%
! CATTCATCATCTTTTGCGCG+AGG + chr3_3:80036823-80036842 None:intergenic 45.0%
!! TTTTGGCTAGTGATGGCTTG+TGG - chr3_3:80036848-80036867 Msa0476240:five_prime_UTR 45.0%
! TTTGGCTAGTGATGGCTTGT+GGG - chr3_3:80036849-80036868 Msa0476240:five_prime_UTR 45.0%
CTCAGAGCTGTCCTTAGTAA+GGG - chr3_3:80036942-80036961 Msa0476240:five_prime_UTR 45.0%
TCAGAGCTGTCCTTAGTAAG+GGG - chr3_3:80036943-80036962 Msa0476240:five_prime_UTR 45.0%
TCTGCAAAGCACGGTTTGAT+AGG + chr3_3:80037008-80037027 None:intergenic 45.0%
TCAAACCGTGCTTTGCAGAA+AGG - chr3_3:80037009-80037028 Msa0476240:five_prime_UTR 45.0%
TGCTTCCTTTCTGCAAAGCA+CGG + chr3_3:80037017-80037036 None:intergenic 45.0%
CATTGTACACTGCTGCATTG+GGG - chr3_3:80037261-80037280 Msa0476240:intron 45.0%
GACATGGCGACACATGTAAA+AGG + chr3_3:80037334-80037353 None:intergenic 45.0%
CAGAGTCTTTGTTCTCTAGG+AGG + chr3_3:80037394-80037413 None:intergenic 45.0%
AGGTGGTAGCAATTTGGCAT+TGG - chr3_3:80037459-80037478 Msa0476240:five_prime_UTR 45.0%
!! GTTTTAGCCAACTTCTGCAG+TGG - chr3_3:80037585-80037604 Msa0476240:five_prime_UTR 45.0%
!!! TATTTTTTTTTATTTATTAG+AGG - chr3_3:80033769-80033788 Msa0476240:three_prime_UTR 5.0%
CCGGAAACAAAGGGAATTGG+AGG + chr3_3:80033367-80033386 None:intergenic 50.0%
GCACCGGAAACAAAGGGAAT+TGG + chr3_3:80033370-80033389 None:intergenic 50.0%
TAATACCTGGGTGGGTGAGT+GGG + chr3_3:80033411-80033430 None:intergenic 50.0%
TTAATACCTGGGTGGGTGAG+TGG + chr3_3:80033412-80033431 None:intergenic 50.0%
GACAATCTGGACGACGAAGT+TGG - chr3_3:80034480-80034499 Msa0476240:intron 50.0%
CAGTCGTTCCACCTTTGCAT+GGG - chr3_3:80034511-80034530 Msa0476240:intron 50.0%
CACCTTTGCATGGGAGAGAA+GGG - chr3_3:80034520-80034539 Msa0476240:intron 50.0%
ACCTTTGCATGGGAGAGAAG+GGG - chr3_3:80034521-80034540 Msa0476240:intron 50.0%
AGGCTCAATGCTACAGCAAG+GGG + chr3_3:80034837-80034856 None:intergenic 50.0%
CAAGGCTCAATGCTACAGCA+AGG + chr3_3:80034839-80034858 None:intergenic 50.0%
! CTTGCTGTAGCATTGAGCCT+TGG - chr3_3:80034837-80034856 Msa0476240:intron 50.0%
AAAGGGGTGAGTGGAACAGT+TGG - chr3_3:80034924-80034943 Msa0476240:intron 50.0%
GCAACAGCATCTTCCATCTC+AGG + chr3_3:80035014-80035033 None:intergenic 50.0%
ATGCTGTTGCGATTGCACCT+CGG - chr3_3:80035024-80035043 Msa0476240:CDS 50.0%
ACTTTACCTGAGAGCCACCA+TGG + chr3_3:80035154-80035173 None:intergenic 50.0%
!! CCAACAGTTTCTGGTGCAAC+AGG + chr3_3:80035952-80035971 None:intergenic 50.0%
CCTGTTGCACCAGAAACTGT+TGG - chr3_3:80035949-80035968 Msa0476240:CDS 50.0%
GCAGTGGAACCAACAGTTTC+TGG + chr3_3:80035961-80035980 None:intergenic 50.0%
TATGCAAGAATCGAGGCAGC+TGG - chr3_3:80036198-80036217 Msa0476240:CDS 50.0%
GGCAAGGTGATACAGTGGAA+CGG - chr3_3:80036222-80036241 Msa0476240:CDS 50.0%
CTCGTAGGCGCATACTTCTT+TGG - chr3_3:80036905-80036924 Msa0476240:five_prime_UTR 50.0%
GCTCAGAGCTGTCCTTAGTA+AGG - chr3_3:80036941-80036960 Msa0476240:five_prime_UTR 50.0%
CTGTCCTTAGTAAGGGGAGA+GGG - chr3_3:80036949-80036968 Msa0476240:five_prime_UTR 50.0%
GATTCCCTCTCCCCTTACTA+AGG + chr3_3:80036956-80036975 None:intergenic 50.0%
CTGACTATGAGTCACCGACA+TGG + chr3_3:80037350-80037369 None:intergenic 50.0%
CCACCAGTTACCTGGATCTG+AGG + chr3_3:80033718-80033737 None:intergenic 55.0%
CCTCAGATCCAGGTAACTGG+TGG - chr3_3:80033715-80033734 Msa0476240:three_prime_UTR 55.0%
GCAGTCGTTCCACCTTTGCA+TGG - chr3_3:80034510-80034529 Msa0476240:intron 55.0%
CCTTCTCTCCCATGCAAAGG+TGG + chr3_3:80034522-80034541 None:intergenic 55.0%
CCACCTTTGCATGGGAGAGA+AGG - chr3_3:80034519-80034538 Msa0476240:intron 55.0%
TCCCCTTCTCTCCCATGCAA+AGG + chr3_3:80034525-80034544 None:intergenic 55.0%
GGGTGAGTGGAACAGTTGGT+CGG - chr3_3:80034928-80034947 Msa0476240:intron 55.0%
GGAGTCTATGATGGCCATGG+TGG - chr3_3:80035137-80035156 Msa0476240:CDS 55.0%
TCGAGAGCGGTTCTATGTCG+TGG - chr3_3:80036033-80036052 Msa0476240:CDS 55.0%
CTGGTGGCAAGGTGATACAG+TGG - chr3_3:80036217-80036236 Msa0476240:CDS 55.0%
AGGCATGCGACTTAGCTCGT+AGG - chr3_3:80036890-80036909 Msa0476240:five_prime_UTR 55.0%
GCTGTCCTTAGTAAGGGGAG+AGG - chr3_3:80036948-80036967 Msa0476240:five_prime_UTR 55.0%
TGGAGGATGGTTGTGGCCAA+AGG - chr3_3:80037653-80037672 Msa0476240:five_prime_UTR 55.0%
TGATGGCCATGGTGGCTCTC+AGG - chr3_3:80035145-80035164 Msa0476240:CDS 60.0%
GCAAGAATCGAGGCAGCTGG+TGG - chr3_3:80036201-80036220 Msa0476240:CDS 60.0%
AATCGAGGCAGCTGGTGGCA+AGG - chr3_3:80036206-80036225 Msa0476240:CDS 60.0%
GGGAATCGATCTTGCCGCAC+AGG - chr3_3:80036969-80036988 Msa0476240:five_prime_UTR 60.0%
GTACTCTGCAGCTGCCTGTG+CGG + chr3_3:80036986-80037005 None:intergenic 60.0%
CAACACCCACTCACCCACCC+AGG - chr3_3:80033403-80033422 Msa0476240:three_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 80033242 80037783 80033242 ID=Msa0476240;Name=Msa0476240
chr3_3 mRNA 80033242 80037783 80033242 ID=Msa0476240-mRNA-1;Parent=Msa0476240;Name=Msa0476240-mRNA-1;_AED=0.03;_eAED=0.03;_QI=732|1|1|1|0.75|0.6|5|682|543
chr3_3 exon 80033242 80034258 80033242 ID=Msa0476240-mRNA-1:exon:21811;Parent=Msa0476240-mRNA-1
chr3_3 exon 80034740 80034845 80034740 ID=Msa0476240-mRNA-1:exon:21810;Parent=Msa0476240-mRNA-1
chr3_3 exon 80034936 80035253 80034936 ID=Msa0476240-mRNA-1:exon:21809;Parent=Msa0476240-mRNA-1
chr3_3 exon 80035859 80037071 80035859 ID=Msa0476240-mRNA-1:exon:21808;Parent=Msa0476240-mRNA-1
chr3_3 exon 80037392 80037783 80037392 ID=Msa0476240-mRNA-1:exon:21807;Parent=Msa0476240-mRNA-1
chr3_3 five_prime_UTR 80037392 80037783 80037392 ID=Msa0476240-mRNA-1:five_prime_utr;Parent=Msa0476240-mRNA-1
chr3_3 five_prime_UTR 80036732 80037071 80036732 ID=Msa0476240-mRNA-1:five_prime_utr;Parent=Msa0476240-mRNA-1
chr3_3 CDS 80035859 80036731 80035859 ID=Msa0476240-mRNA-1:cds;Parent=Msa0476240-mRNA-1
chr3_3 CDS 80034936 80035253 80034936 ID=Msa0476240-mRNA-1:cds;Parent=Msa0476240-mRNA-1
chr3_3 CDS 80034740 80034845 80034740 ID=Msa0476240-mRNA-1:cds;Parent=Msa0476240-mRNA-1
chr3_3 CDS 80033924 80034258 80033924 ID=Msa0476240-mRNA-1:cds;Parent=Msa0476240-mRNA-1
chr3_3 three_prime_UTR 80033242 80033923 80033242 ID=Msa0476240-mRNA-1:three_prime_utr;Parent=Msa0476240-mRNA-1
Gene Sequence

>Msa0476240

ATGGAGGAAATGTCAGTTGCAGTGCCATTAATAGCTGGTAATTCAGTGTGTGATAATCCAACCATAGCTACTCACATGGATGTTTCGGCAATTAAGATGATGGCCAATGCAGAGCTGATATCAAATGCTATAACTACGATATCCGCTGATACTACTTTTATTGGTTCTGATGAGGATCATATTGGTGACAATCTGGACGACGAAGTTGGTGTTTCAGCAGTCGTTCCACCTTTGCATGGGAGAGAAGGGGAAATTCTTTTGTTGAATATGATATCTCAAAGTAGCGATGAACTTTTAGTCCCAGAAGTTGATGAGGATGATTCATTATCATTGGAAGGGGATCCAATTATTTATAGCACTCTATCAGTAACTAGCGAGAATGGTAGTGTTTGTGGAGATGAATTCTTCAGCGCTGAAGATAATTTGTATTTTAGGGCAAAGAGTTCGATGGACATAGATAAGAACATATCTTCTGTCGAAATTGTTGCTAGGGCTGCTGTTTTCGACAAGTCCAATGTGGAGGCAGATATTATGAGTGAACCCCTTGCTGTAGCATTGAGCCTTGGAGATGAAACAGGAGTTAGATCCGTACCGTTGCCTACTACAGTTCTTCATCAACTGCCTCTTAAAAAAGGGGTGAGTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTGTACCCCACTTTGGGGATTTACATCTTTATGTGGAAAGAGACCTGAGATGGAAGATGCTGTTGCGATTGCACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAACAGCAAATATGATGGAATGAACAAGGATTTTAGTGAGCAGACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAATTATTGTCGAGATCGTATGCATTTGGCCTTAATTGAGGAGATAGAATTGTTCAAGAAAGGTCTAATAATTGGAAGTACCAAGGATGATTGTCGAGATTTATGGAAAAAAGCTTTCACTAATTGTTTTTCAAAAGTTGACGATGAAGTTGGGGGAAAAGTTAACGGTGATCCTGTTGCACCAGAAACTGTTGGTTCCACTGCCGTTGTAGCTATTGTTTGTTCATCCCATATCATTGTTTCAAATTGTGGTGATTCGAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGCCTTTATCTGAGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAGTGGAACGGTCATCGTGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATCAATTATTCCCGAACCAGAAATTACATTCATCCCTCGCGCAAAAGATGATGAATGTCTCATTTTGGCTAGTGATGGCTTGTGGGATGTCATGACAAATGAAGAGGCATGCGACTTAGCTCGTAGGCGCATACTTCTTTGGCACAAGAAAAATGGCTCAGAGCTGTCCTTAGTAAGGGGAGAGGGAATCGATCTTGCCGCACAGGCAGCTGCAGAGTACCTATCAAACCGTGCTTTGCAGAAAGGAAGCAAAGATAACATCACTGTCGTCGTAGTAGATTTGAAAGCTCAGCGAAAATTTAAGACTAAAACATGA
Protein sequence

>Msa0476240

MEEMSVAVPLIAGNSVCDNPTIATHMDVSAIKMMANAELISNAITTISADTTFIGSDEDHIGDNLDDEVGVSAVVPPLHGREGEILLLNMISQSSDELLVPEVDEDDSLSLEGDPIIYSTLSVTSENGSVCGDEFFSAEDNLYFRAKSSMDIDKNISSVEIVARAAVFDKSNVEADIMSEPLAVALSLGDETGVRSVPLPTTVLHQLPLKKGVSGTVGRSVFELDCTPLWGFTSLCGKRPEMEDAVAIAPRMLKIPIQMLNGNSKYDGMNKDFSEQTIHFFGVYDGHGGSQVANYCRDRMHLALIEEIELFKKGLIIGSTKDDCRDLWKKAFTNCFSKVDDEVGGKVNGDPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPMPLSEDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPEPEITFIPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSLVRGEGIDLAAQAAAEYLSNRALQKGSKDNITVVVVDLKAQRKFKTKT*