Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526490 | XP_013447087.1 | 95.134 | 411 | 4 | 3 | 1 | 411 | 1 | 395 | 0.0 | 800 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526490 | sp|Q38897|BEL1_ARATH | 42.487 | 386 | 142 | 11 | 100 | 411 | 38 | 417 | 1.04e-71 | 239 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526490 | A0A072TUA6 | 95.134 | 411 | 4 | 3 | 1 | 411 | 1 | 395 | 0.0 | 800 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0526490 | 0.815241 | 1.022327e-51 | -8.615850e-47 |
| Msa0007810 | Msa0526490 | 0.836330 | 9.969953e-57 | -8.615850e-47 |
| Msa0011060 | Msa0526490 | 0.808756 | 2.648396e-50 | -8.615850e-47 |
| Msa0011920 | Msa0526490 | 0.814884 | 1.227405e-51 | -8.615850e-47 |
| Msa0025060 | Msa0526490 | 0.807201 | 5.673404e-50 | -8.615850e-47 |
| Msa0027610 | Msa0526490 | 0.839986 | 1.140864e-57 | -8.615850e-47 |
| Msa0037230 | Msa0526490 | -0.810770 | 9.769408e-51 | -8.615850e-47 |
| Msa0044010 | Msa0526490 | -0.866198 | 3.397899e-65 | -8.615850e-47 |
| Msa0048410 | Msa0526490 | 0.801930 | 7.135541e-49 | -8.615850e-47 |
| Msa0050320 | Msa0526490 | 0.804620 | 1.979549e-49 | -8.615850e-47 |
| Msa0056230 | Msa0526490 | 0.825515 | 4.495139e-54 | -8.615850e-47 |
| Msa0072570 | Msa0526490 | -0.810891 | 9.198208e-51 | -8.615850e-47 |
| Msa0075370 | Msa0526490 | 0.836601 | 8.502659e-57 | -8.615850e-47 |
| Msa0077320 | Msa0526490 | -0.823189 | 1.583930e-53 | -8.615850e-47 |
| Msa0079320 | Msa0526490 | 0.845879 | 3.083373e-59 | -8.615850e-47 |
| Msa0081700 | Msa0526490 | 0.823109 | 1.653250e-53 | -8.615850e-47 |
| Msa0091300 | Msa0526490 | 0.860770 | 1.638807e-63 | -8.615850e-47 |
| Msa0098500 | Msa0526490 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0099090 | Msa0526490 | 0.844654 | 6.614745e-59 | -8.615850e-47 |
| Msa0099480 | Msa0526490 | 0.818409 | 1.989666e-52 | -8.615850e-47 |
| Msa0114570 | Msa0526490 | -0.812755 | 3.613497e-51 | -8.615850e-47 |
| Msa0123310 | Msa0526490 | 0.841903 | 3.582179e-58 | -8.615850e-47 |
| Msa0127910 | Msa0526490 | 0.813095 | 3.043767e-51 | -8.615850e-47 |
| Msa0139930 | Msa0526490 | 0.802575 | 5.256609e-49 | -8.615850e-47 |
| Msa0154720 | Msa0526490 | 0.803881 | 2.820449e-49 | -8.615850e-47 |
| Msa0154880 | Msa0526490 | 0.803270 | 3.776253e-49 | -8.615850e-47 |
| Msa0167800 | Msa0526490 | 0.834809 | 2.417312e-56 | -8.615850e-47 |
| Msa0169710 | Msa0526490 | -0.833825 | 4.269606e-56 | -8.615850e-47 |
| Msa0172110 | Msa0526490 | 0.837150 | 6.160516e-57 | -8.615850e-47 |
| Msa0174060 | Msa0526490 | 0.827681 | 1.367772e-54 | -8.615850e-47 |
| Msa0178440 | Msa0526490 | 0.806283 | 8.868825e-50 | -8.615850e-47 |
| Msa0178540 | Msa0526490 | 0.800413 | 1.458480e-48 | -8.615850e-47 |
| Msa0183840 | Msa0526490 | -0.820704 | 5.960063e-53 | -8.615850e-47 |
| Msa0186400 | Msa0526490 | 0.813079 | 3.069620e-51 | -8.615850e-47 |
| Msa0195030 | Msa0526490 | -0.857550 | 1.511884e-62 | -8.615850e-47 |
| Msa0214800 | Msa0526490 | -0.819367 | 1.205282e-52 | -8.615850e-47 |
| Msa0223500 | Msa0526490 | 0.824459 | 7.978459e-54 | -8.615850e-47 |
| Msa0225070 | Msa0526490 | 0.803192 | 3.919443e-49 | -8.615850e-47 |
| Msa0232660 | Msa0526490 | 0.806613 | 7.554661e-50 | -8.615850e-47 |
| Msa0233920 | Msa0526490 | -0.828983 | 6.635727e-55 | -8.615850e-47 |
| Msa0237180 | Msa0526490 | -0.849332 | 3.460192e-60 | -8.615850e-47 |
| Msa0370350 | Msa0526490 | 0.827602 | 1.429116e-54 | -8.615850e-47 |
| Msa0376830 | Msa0526490 | -0.808700 | 2.722981e-50 | -8.615850e-47 |
| Msa0378620 | Msa0526490 | 0.816336 | 5.828658e-52 | -8.615850e-47 |
| Msa0384590 | Msa0526490 | -0.806818 | 6.837608e-50 | -8.615850e-47 |
| Msa0389080 | Msa0526490 | 0.802950 | 4.397751e-49 | -8.615850e-47 |
| Msa0390590 | Msa0526490 | 0.814964 | 1.177905e-51 | -8.615850e-47 |
| Msa0417850 | Msa0526490 | 0.816245 | 6.107290e-52 | -8.615850e-47 |
| Msa0430130 | Msa0526490 | -0.816039 | 6.792036e-52 | -8.615850e-47 |
| Msa0432260 | Msa0526490 | 0.850024 | 2.218426e-60 | -8.615850e-47 |
| Msa0460080 | Msa0526490 | 0.823395 | 1.417405e-53 | -8.615850e-47 |
| Msa0476240 | Msa0526490 | 0.805721 | 1.164174e-49 | -8.615850e-47 |
| Msa0476730 | Msa0526490 | 0.806127 | 9.566527e-50 | -8.615850e-47 |
| Msa0480940 | Msa0526490 | -0.808283 | 3.342096e-50 | -8.615850e-47 |
| Msa0240590 | Msa0526490 | 0.815293 | 9.955913e-52 | -8.615850e-47 |
| Msa0264580 | Msa0526490 | 0.833059 | 6.628057e-56 | -8.615850e-47 |
| Msa0266380 | Msa0526490 | 0.806588 | 7.649030e-50 | -8.615850e-47 |
| Msa0269220 | Msa0526490 | 0.813212 | 2.868860e-51 | -8.615850e-47 |
| Msa0274940 | Msa0526490 | -0.812612 | 3.884584e-51 | -8.615850e-47 |
| Msa0279090 | Msa0526490 | 0.810729 | 9.975113e-51 | -8.615850e-47 |
| Msa0281330 | Msa0526490 | -0.812939 | 3.293461e-51 | -8.615850e-47 |
| Msa0281370 | Msa0526490 | -0.836725 | 7.906661e-57 | -8.615850e-47 |
| Msa0294200 | Msa0526490 | -0.800334 | 1.513137e-48 | -8.615850e-47 |
| Msa0295030 | Msa0526490 | 0.823558 | 1.298675e-53 | -8.615850e-47 |
| Msa0307380 | Msa0526490 | -0.806692 | 7.272274e-50 | -8.615850e-47 |
| Msa0307430 | Msa0526490 | -0.801420 | 9.080026e-49 | -8.615850e-47 |
| Msa0315660 | Msa0526490 | -0.855034 | 8.269452e-62 | -8.615850e-47 |
| Msa0316140 | Msa0526490 | -0.852912 | 3.381159e-61 | -8.615850e-47 |
| Msa0326170 | Msa0526490 | 0.800641 | 1.310505e-48 | -8.615850e-47 |
| Msa0339970 | Msa0526490 | 0.836101 | 1.140086e-56 | -8.615850e-47 |
| Msa0341860 | Msa0526490 | 0.824617 | 7.324611e-54 | -8.615850e-47 |
| Msa0362440 | Msa0526490 | 0.853947 | 1.705821e-61 | -8.615850e-47 |
| Msa0483090 | Msa0526490 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0483160 | Msa0526490 | 0.824313 | 8.635321e-54 | -8.615850e-47 |
| Msa0491160 | Msa0526490 | 0.805362 | 1.384576e-49 | -8.615850e-47 |
| Msa0502900 | Msa0526490 | 0.844909 | 5.643064e-59 | -8.615850e-47 |
| Msa0522540 | Msa0526490 | -0.807323 | 5.347810e-50 | -8.615850e-47 |
| Msa0523420 | Msa0526490 | 0.808012 | 3.816762e-50 | -8.615850e-47 |
| Msa0525940 | Msa0526490 | 0.804425 | 2.173444e-49 | -8.615850e-47 |
| Msa0526150 | Msa0526490 | -0.820698 | 5.977798e-53 | -8.615850e-47 |
| Msa0526490 | Msa0526500 | 0.925138 | 2.752828e-90 | -8.615850e-47 |
| Msa0526490 | Msa0526520 | 0.813273 | 2.782510e-51 | -8.615850e-47 |
| Msa0526490 | Msa0533610 | 0.819859 | 9.308423e-53 | -8.615850e-47 |
| Msa0526490 | Msa0538050 | 0.808668 | 2.765492e-50 | -8.615850e-47 |
| Msa0526490 | Msa0545750 | 0.834305 | 3.237156e-56 | -8.615850e-47 |
| Msa0526490 | Msa0553940 | 0.813098 | 3.039770e-51 | -8.615850e-47 |
| Msa0526490 | Msa0555510 | 0.803158 | 3.983465e-49 | -8.615850e-47 |
| Msa0526490 | Msa0563230 | 0.809020 | 2.326054e-50 | -8.615850e-47 |
| Msa0526490 | Msa0563440 | -0.845108 | 4.987252e-59 | -8.615850e-47 |
| Msa0526490 | Msa0569580 | 0.812450 | 4.212960e-51 | -8.615850e-47 |
| Msa0526490 | Msa0569980 | 0.839271 | 1.751256e-57 | -8.615850e-47 |
| Msa0526490 | Msa0571880 | 0.869562 | 2.821843e-66 | -8.615850e-47 |
| Msa0526490 | Msa0571900 | 0.815121 | 1.087520e-51 | -8.615850e-47 |
| Msa0526490 | Msa0575960 | 0.814443 | 1.536742e-51 | -8.615850e-47 |
| Msa0526490 | Msa0602320 | 0.845194 | 4.728395e-59 | -8.615850e-47 |
| Msa0526490 | Msa0604890 | 0.829808 | 4.184725e-55 | -8.615850e-47 |
| Msa0526490 | Msa0617470 | 0.822001 | 2.991735e-53 | -8.615850e-47 |
| Msa0526490 | Msa0646180 | 0.839786 | 1.286133e-57 | -8.615850e-47 |
| Msa0526490 | Msa0648260 | 0.808984 | 2.367397e-50 | -8.615850e-47 |
| Msa0526490 | Msa0649530 | 0.816971 | 4.200431e-52 | -8.615850e-47 |
| Msa0526490 | Msa0651870 | -0.858001 | 1.111205e-62 | -8.615850e-47 |
| Msa0526490 | Msa0651890 | -0.858395 | 8.482038e-63 | -8.615850e-47 |
| Msa0526490 | Msa0654570 | 0.823379 | 1.429943e-53 | -8.615850e-47 |
| Msa0526490 | Msa0660430 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0526490 | Msa0683200 | 0.824655 | 7.177221e-54 | -8.615850e-47 |
| Msa0526490 | Msa0691740 | 0.828022 | 1.132245e-54 | -8.615850e-47 |
| Msa0526490 | Msa0700250 | 0.816482 | 5.405946e-52 | -8.615850e-47 |
| Msa0526490 | Msa0700410 | -0.818384 | 2.016364e-52 | -8.615850e-47 |
| Msa0526490 | Msa0701800 | 0.802603 | 5.187973e-49 | -8.615850e-47 |
| Msa0526490 | Msa0702020 | 0.818297 | 2.109841e-52 | -8.615850e-47 |
| Msa0526490 | Msa0704690 | -0.802401 | 5.708673e-49 | -8.615850e-47 |
| Msa0526490 | Msa0708840 | 0.810699 | 1.012177e-50 | -8.615850e-47 |
| Msa0526490 | Msa0720710 | -0.829530 | 4.889494e-55 | -8.615850e-47 |
| Msa0526490 | Msa0722660 | 0.832328 | 1.006228e-55 | -8.615850e-47 |
| Msa0526490 | Msa0733240 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0526490 | Msa0774360 | 0.802125 | 6.505967e-49 | -8.615850e-47 |
| Msa0526490 | Msa0779450 | 0.813275 | 2.778968e-51 | -8.615850e-47 |
| Msa0526490 | Msa0801320 | 0.845942 | 2.963303e-59 | -8.615850e-47 |
| Msa0526490 | Msa0801630 | 0.824653 | 7.182987e-54 | -8.615850e-47 |
| Msa0526490 | Msa0812020 | 0.829218 | 5.822381e-55 | -8.615850e-47 |
| Msa0526490 | Msa0829770 | 0.807578 | 4.720786e-50 | -8.615850e-47 |
| Msa0526490 | Msa0853150 | 0.813259 | 2.801609e-51 | -8.615850e-47 |
| Msa0526490 | Msa0869320 | 0.811243 | 7.718877e-51 | -8.615850e-47 |
| Msa0526490 | Msa0924690 | 0.802617 | 5.154214e-49 | -8.615850e-47 |
| Msa0526490 | Msa0931550 | 0.801201 | 1.006821e-48 | -8.615850e-47 |
| Msa0526490 | Msa0934290 | 0.805824 | 1.107450e-49 | -8.615850e-47 |
| Msa0526490 | Msa0936950 | -0.818478 | 1.919696e-52 | -8.615850e-47 |
| Msa0526490 | Msa0956600 | 0.806865 | 6.684466e-50 | -8.615850e-47 |
| Msa0526490 | Msa0958220 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0526490 | Msa0963800 | 0.805924 | 1.055338e-49 | -8.615850e-47 |
| Msa0526490 | Msa0971780 | 0.805613 | 1.226751e-49 | -8.615850e-47 |
| Msa0526490 | Msa1014550 | 0.838571 | 2.656985e-57 | -8.615850e-47 |
| Msa0526490 | Msa1019090 | -0.845806 | 3.227503e-59 | -8.615850e-47 |
| Msa0526490 | Msa1029570 | 0.826432 | 2.722137e-54 | -8.615850e-47 |
| Msa0526490 | Msa1055520 | 0.829732 | 4.366835e-55 | -8.615850e-47 |
| Msa0526490 | Msa1078280 | 0.819046 | 1.426740e-52 | -8.615850e-47 |
| Msa0526490 | Msa1078480 | -0.814119 | 1.811804e-51 | -8.615850e-47 |
| Msa0526490 | Msa1078590 | 0.817372 | 3.411592e-52 | -8.615850e-47 |
| Msa0526490 | Msa1078640 | -0.812202 | 4.772673e-51 | -8.615850e-47 |
| Msa0526490 | Msa1078760 | 0.817516 | 3.166793e-52 | -8.615850e-47 |
| Msa0526490 | Msa1085570 | 0.808666 | 2.768921e-50 | -8.615850e-47 |
| Msa0526490 | Msa1087890 | -0.816160 | 6.382511e-52 | -8.615850e-47 |
| Msa0526490 | Msa1093190 | 0.831683 | 1.452310e-55 | -8.615850e-47 |
| Msa0526490 | Msa1104020 | 0.804971 | 1.672243e-49 | -8.615850e-47 |
| Msa0526490 | Msa1134430 | 0.812020 | 5.230952e-51 | -8.615850e-47 |
| Msa0526490 | Msa1146980 | -0.804971 | 1.672268e-49 | -8.615850e-47 |
| Msa0526490 | Msa1147650 | -0.804542 | 2.054602e-49 | -8.615850e-47 |
| Msa0526490 | Msa1169590 | 0.827975 | 1.162679e-54 | -8.615850e-47 |
| Msa0526490 | Msa1169780 | 0.826744 | 2.292657e-54 | -8.615850e-47 |
| Msa0526490 | Msa1181370 | 0.829337 | 5.445813e-55 | -8.615850e-47 |
| Msa0526490 | Msa1205270 | 0.806385 | 8.440467e-50 | -8.615850e-47 |
| Msa0526490 | Msa1207710 | 0.807741 | 4.359423e-50 | -8.615850e-47 |
| Msa0526490 | Msa1213470 | 0.855014 | 8.381657e-62 | -8.615850e-47 |
| Msa0526490 | Msa1258060 | -0.815356 | 9.640789e-52 | -8.615850e-47 |
| Msa0526490 | Msa1260520 | 0.819786 | 9.674914e-53 | -8.615850e-47 |
| Msa0526490 | Msa1273620 | 0.803755 | 2.995895e-49 | -8.615850e-47 |
| Msa0526490 | Msa1298980 | 0.812563 | 3.980904e-51 | -8.615850e-47 |
| Msa0526490 | Msa1300370 | 0.855710 | 5.254299e-62 | -8.615850e-47 |
| Msa0526490 | Msa1332340 | 0.804643 | 1.957878e-49 | -8.615850e-47 |
| Msa0526490 | Msa1352580 | -0.800246 | 1.576645e-48 | -8.615850e-47 |
| Msa0526490 | Msa1359880 | 0.838090 | 3.535992e-57 | -8.615850e-47 |
| Msa0526490 | Msa1360070 | 0.813066 | 3.088624e-51 | -8.615850e-47 |
| Msa0526490 | Msa1363270 | 0.964349 | 3.250694e-123 | -8.615850e-47 |
| Msa0526490 | Msa1363280 | 0.923696 | 1.889472e-89 | -8.615850e-47 |
| Msa0526490 | Msa1363310 | 0.813231 | 2.841595e-51 | -8.615850e-47 |
| Msa0526490 | Msa1364110 | -0.804672 | 1.930463e-49 | -8.615850e-47 |
| Msa0526490 | Msa1372190 | 0.819949 | 8.875969e-53 | -8.615850e-47 |
| Msa0526490 | Msa1381870 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0526490 | Msa1384410 | 0.817904 | 2.588865e-52 | -8.615850e-47 |
| Msa0526490 | Msa1385970 | -0.801602 | 8.335179e-49 | -8.615850e-47 |
| Msa0526490 | Msa1386580 | 0.814852 | 1.247294e-51 | -8.615850e-47 |
| Msa0526490 | Msa1389340 | -0.803517 | 3.356728e-49 | -8.615850e-47 |
| Msa0526490 | Msa1389670 | 0.804046 | 2.606602e-49 | -8.615850e-47 |
| Msa0526490 | Msa1398310 | 0.800219 | 1.597292e-48 | -8.615850e-47 |
| Msa0526490 | Msa1408990 | -0.827694 | 1.358277e-54 | -8.615850e-47 |
| Msa0526490 | Msa1412800 | 0.814404 | 1.567596e-51 | -8.615850e-47 |
| Msa0526490 | Msa1414780 | 0.808317 | 3.286770e-50 | -8.615850e-47 |
| Msa0526490 | Msa1417110 | -0.810387 | 1.181953e-50 | -8.615850e-47 |
| Msa0526490 | Msa1421520 | 0.803363 | 3.612240e-49 | -8.615850e-47 |
| Msa0526490 | Msa1433060 | 0.806508 | 7.949457e-50 | -8.615850e-47 |
| Msa0526490 | Msa1435950 | 0.803118 | 4.060681e-49 | -8.615850e-47 |
| Msa0526490 | Msa1448840 | 0.809739 | 1.630520e-50 | -8.615850e-47 |
| Msa0526490 | Msa1459130 | 0.806778 | 6.973221e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526490 | MtrunA17_Chr8g0387321 | 95.134 | 411 | 4 | 3 | 1 | 411 | 1 | 395 | 0.0 | 800 |
| Msa0526490 | MtrunA17_Chr5g0403251 | 52.790 | 233 | 92 | 3 | 190 | 411 | 325 | 550 | 6.21e-70 | 234 |
| Msa0526490 | MtrunA17_Chr8g0373801 | 51.807 | 249 | 94 | 4 | 189 | 411 | 354 | 602 | 2.62e-67 | 228 |
| Msa0526490 | MtrunA17_Chr1g0155681 | 47.321 | 224 | 88 | 5 | 204 | 411 | 173 | 382 | 1.03e-54 | 191 |
| Msa0526490 | MtrunA17_Chr1g0177751 | 45.133 | 226 | 95 | 3 | 201 | 411 | 161 | 372 | 6.12e-53 | 187 |
| Msa0526490 | MtrunA17_Chr3g0141941 | 41.949 | 236 | 98 | 6 | 194 | 411 | 157 | 371 | 1.04e-49 | 176 |
| Msa0526490 | MtrunA17_Chr7g0267481 | 44.561 | 285 | 134 | 7 | 138 | 411 | 113 | 384 | 1.91e-47 | 172 |
| Msa0526490 | MtrunA17_Chr4g0025521 | 47.393 | 211 | 104 | 3 | 205 | 411 | 221 | 428 | 2.07e-45 | 167 |
| Msa0526490 | MtrunA17_Chr4g0028701 | 39.130 | 253 | 111 | 7 | 201 | 411 | 245 | 496 | 4.51e-39 | 148 |
| Msa0526490 | MtrunA17_Chr4g0008591 | 39.556 | 225 | 88 | 6 | 201 | 411 | 196 | 386 | 7.55e-37 | 141 |
| Msa0526490 | MtrunA17_Chr7g0240371 | 39.623 | 212 | 110 | 5 | 201 | 411 | 137 | 331 | 2.26e-36 | 139 |
| Msa0526490 | MtrunA17_Chr3g0141931 | 38.914 | 221 | 114 | 7 | 201 | 411 | 165 | 374 | 1.54e-35 | 135 |
| Msa0526490 | MtrunA17_Chr2g0327021 | 38.565 | 223 | 120 | 5 | 201 | 411 | 248 | 465 | 3.78e-33 | 131 |
| Msa0526490 | MtrunA17_Chr1g0151681 | 33.803 | 142 | 85 | 4 | 270 | 411 | 318 | 450 | 4.03e-17 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0526490 | AT5G41410.1 | 42.487 | 386 | 142 | 11 | 100 | 411 | 38 | 417 | 1.05e-72 | 239 |
| Msa0526490 | AT4G36870.4 | 52.752 | 218 | 91 | 3 | 201 | 411 | 312 | 524 | 1.52e-66 | 221 |
| Msa0526490 | AT4G36870.3 | 52.752 | 218 | 91 | 3 | 201 | 411 | 312 | 524 | 3.49e-66 | 221 |
| Msa0526490 | AT2G23760.2 | 51.152 | 217 | 103 | 1 | 198 | 411 | 234 | 450 | 1.50e-65 | 220 |
| Msa0526490 | AT2G23760.1 | 51.152 | 217 | 103 | 1 | 198 | 411 | 234 | 450 | 1.50e-65 | 220 |
| Msa0526490 | AT2G23760.3 | 51.152 | 217 | 103 | 1 | 198 | 411 | 234 | 450 | 1.50e-65 | 220 |
| Msa0526490 | AT4G36870.2 | 52.752 | 218 | 91 | 3 | 201 | 411 | 312 | 524 | 3.58e-65 | 221 |
| Msa0526490 | AT4G36870.1 | 52.752 | 218 | 91 | 3 | 201 | 411 | 312 | 524 | 3.58e-65 | 221 |
| Msa0526490 | AT2G23760.4 | 51.152 | 217 | 103 | 1 | 198 | 411 | 234 | 450 | 1.46e-64 | 219 |
| Msa0526490 | AT1G75410.3 | 50.000 | 212 | 91 | 5 | 205 | 411 | 171 | 372 | 9.54e-56 | 189 |
| Msa0526490 | AT1G19700.1 | 49.524 | 210 | 102 | 3 | 205 | 411 | 169 | 377 | 3.39e-55 | 191 |
| Msa0526490 | AT1G19700.3 | 49.524 | 210 | 102 | 3 | 205 | 411 | 169 | 377 | 3.39e-55 | 191 |
| Msa0526490 | AT1G19700.5 | 49.524 | 210 | 102 | 3 | 205 | 411 | 169 | 377 | 3.39e-55 | 191 |
| Msa0526490 | AT1G19700.4 | 49.524 | 210 | 102 | 3 | 205 | 411 | 169 | 377 | 3.39e-55 | 191 |
| Msa0526490 | AT1G19700.2 | 49.524 | 210 | 102 | 3 | 205 | 411 | 169 | 377 | 3.39e-55 | 191 |
| Msa0526490 | AT1G75410.1 | 49.761 | 209 | 96 | 4 | 205 | 411 | 171 | 372 | 8.18e-55 | 189 |
| Msa0526490 | AT1G75410.2 | 49.761 | 209 | 96 | 4 | 205 | 411 | 171 | 372 | 8.18e-55 | 189 |
| Msa0526490 | AT4G34610.2 | 44.747 | 257 | 125 | 3 | 162 | 411 | 94 | 340 | 1.41e-54 | 189 |
| Msa0526490 | AT4G34610.4 | 44.747 | 257 | 125 | 3 | 162 | 411 | 94 | 340 | 1.41e-54 | 189 |
| Msa0526490 | AT4G34610.3 | 44.747 | 257 | 125 | 3 | 162 | 411 | 94 | 340 | 1.41e-54 | 189 |
| Msa0526490 | AT4G34610.1 | 44.747 | 257 | 125 | 3 | 162 | 411 | 94 | 340 | 1.41e-54 | 189 |
| Msa0526490 | AT2G16400.1 | 47.867 | 211 | 95 | 4 | 202 | 411 | 115 | 311 | 5.24e-52 | 181 |
| Msa0526490 | AT2G35940.3 | 47.391 | 230 | 93 | 6 | 202 | 411 | 190 | 411 | 6.43e-51 | 182 |
| Msa0526490 | AT2G35940.1 | 47.391 | 230 | 93 | 6 | 202 | 411 | 190 | 411 | 6.43e-51 | 182 |
| Msa0526490 | AT2G35940.2 | 47.391 | 230 | 93 | 6 | 202 | 411 | 190 | 411 | 6.43e-51 | 182 |
| Msa0526490 | AT1G75430.1 | 41.566 | 166 | 87 | 3 | 255 | 411 | 64 | 228 | 4.01e-36 | 134 |
| Msa0526490 | AT1G75430.2 | 41.566 | 166 | 87 | 3 | 255 | 411 | 64 | 228 | 7.53e-36 | 133 |
| Msa0526490 | AT2G27220.1 | 36.098 | 205 | 99 | 4 | 207 | 411 | 82 | 254 | 1.65e-32 | 127 |
| Msa0526490 | AT2G27220.3 | 36.098 | 205 | 99 | 4 | 207 | 411 | 82 | 254 | 1.65e-32 | 127 |
| Msa0526490 | AT2G27990.2 | 36.187 | 257 | 129 | 7 | 162 | 411 | 222 | 450 | 8.21e-32 | 125 |
| Msa0526490 | AT2G27990.1 | 36.187 | 257 | 129 | 7 | 162 | 411 | 222 | 450 | 2.10e-31 | 126 |
| Msa0526490 | AT5G02030.1 | 37.727 | 220 | 113 | 5 | 201 | 411 | 170 | 374 | 2.75e-31 | 125 |
| Msa0526490 | AT2G27220.2 | 33.184 | 223 | 99 | 5 | 207 | 411 | 82 | 272 | 8.64e-29 | 117 |
| Msa0526490 | AT4G32980.1 | 29.384 | 211 | 136 | 4 | 201 | 411 | 201 | 398 | 9.43e-18 | 85.5 |
| Msa0526490 | AT4G32980.2 | 29.384 | 211 | 136 | 4 | 201 | 411 | 201 | 398 | 9.43e-18 | 85.5 |
Find 71 sgRNAs with CRISPR-Local
Find 190 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTCACCCTTTGTTGTTCC+AGG | 0.285076 | 3_4:-80378284 | None:intergenic |
| TGGGTATATGAAGACTAATT+TGG | 0.285694 | 3_4:+80376563 | None:intergenic |
| GTGAATTAATTTATATTATG+AGG | 0.293121 | 3_4:-80376780 | None:intergenic |
| AACGTTCTGTTTCTATTCTC+AGG | 0.300212 | 3_4:+80378411 | Msa0526490:CDS |
| TCAACAAACCCTTCCTCTAT+TGG | 0.302539 | 3_4:+80377365 | Msa0526490:CDS |
| CTGTTTCTATTCTCAGGGCT+TGG | 0.328263 | 3_4:+80378417 | Msa0526490:CDS |
| TTTGTTGTTCCAGGTGCAAC+AGG | 0.331439 | 3_4:-80378275 | None:intergenic |
| TTGGTTGTATTTATAAATCT+TGG | 0.335531 | 3_4:+80376582 | Msa0526490:five_prime_UTR |
| TGCGAAAGTTTATTCAGCTT+TGG | 0.371886 | 3_4:+80378160 | Msa0526490:CDS |
| TTTGAAGCTGTAGCTGGAAA+TGG | 0.404194 | 3_4:+80378134 | Msa0526490:CDS |
| ATAATATTTAGGTTGATAGA+AGG | 0.409270 | 3_4:+80378069 | Msa0526490:intron |
| AAGATGTTGTTGATGTTGTT+TGG | 0.412598 | 3_4:-80377003 | None:intergenic |
| AGTTCAACAACAAGCAAAGT+TGG | 0.418663 | 3_4:+80377570 | Msa0526490:CDS |
| TGAAATCTTGATGTTGTTGT+TGG | 0.430842 | 3_4:-80377160 | None:intergenic |
| GTAGTGAGATTAAACATCTC+TGG | 0.433803 | 3_4:-80376957 | None:intergenic |
| TGAATTAATTTATATTATGA+GGG | 0.438589 | 3_4:-80376779 | None:intergenic |
| CTTAACAAGTGATGAGTCAA+TGG | 0.447843 | 3_4:-80376606 | None:intergenic |
| AATCATCATTTACAAGATCA+AGG | 0.456108 | 3_4:+80377419 | Msa0526490:CDS |
| TGGATTTGTGTTTGAATCGT+TGG | 0.458396 | 3_4:-80376918 | None:intergenic |
| TCATCATTTGAAGCTGTAGC+TGG | 0.459401 | 3_4:+80378128 | Msa0526490:CDS |
| GAGATGTTTAATCTCACTAC+AGG | 0.460320 | 3_4:+80376960 | Msa0526490:CDS |
| AGAAGATGAGATAGCTAGAG+AGG | 0.471063 | 3_4:-80376704 | None:intergenic |
| ATGTGGAAAACAAATTTCTC+AGG | 0.472948 | 3_4:+80377068 | Msa0526490:CDS |
| GTTCAACAACAAGCAAAGTT+GGG | 0.479946 | 3_4:+80377571 | Msa0526490:CDS |
| AAAGAGAGTATATGATAGCA+TGG | 0.487912 | 3_4:+80376665 | Msa0526490:five_prime_UTR |
| AGAATAGAAACAGAACGTTC+AGG | 0.489616 | 3_4:-80378407 | None:intergenic |
| AAAAGATTGTAAACCAATAG+AGG | 0.498080 | 3_4:-80377378 | None:intergenic |
| ACTACAGGGATGGAGATGAT+AGG | 0.502219 | 3_4:+80376975 | Msa0526490:CDS |
| TCATTGAGAAGTTCTTGTGC+TGG | 0.509475 | 3_4:-80377485 | None:intergenic |
| ACGTTCTGTTTCTATTCTCA+GGG | 0.510571 | 3_4:+80378412 | Msa0526490:CDS |
| TTACAAGATCAAGGGTATCA+AGG | 0.518553 | 3_4:+80377428 | Msa0526490:CDS |
| TCAAACAACAAGAAAAGCAA+TGG | 0.524152 | 3_4:+80378241 | Msa0526490:CDS |
| ACATGATGGAAACACATCCT+TGG | 0.528940 | 3_4:+80378366 | Msa0526490:CDS |
| ATAATATACCTCTTCTAGCA+TGG | 0.533662 | 3_4:-80377693 | None:intergenic |
| GTTGCACCTGGAACAACAAA+GGG | 0.538924 | 3_4:+80378278 | Msa0526490:CDS |
| CAAACAACAAGAAAAGCAAT+GGG | 0.541294 | 3_4:+80378242 | Msa0526490:CDS |
| GATTGTAAACCAATAGAGGA+AGG | 0.551563 | 3_4:-80377374 | None:intergenic |
| CTGGATCCGACACAAAACCT+TGG | 0.555288 | 3_4:-80376938 | None:intergenic |
| AGCACTATTGTAATCAAATG+AGG | 0.555931 | 3_4:+80378096 | Msa0526490:CDS |
| GGTCTTTCATTACCTTCACA+AGG | 0.569310 | 3_4:-80377314 | None:intergenic |
| ATTTCAACAAATCAACATGA+TGG | 0.573334 | 3_4:+80378352 | Msa0526490:CDS |
| TGTTGCACCTGGAACAACAA+AGG | 0.574394 | 3_4:+80378277 | Msa0526490:CDS |
| GAAGATGAGATAGCTAGAGA+GGG | 0.581581 | 3_4:-80376703 | None:intergenic |
| GTTTAATCTCACTACAGGGA+TGG | 0.583583 | 3_4:+80376965 | Msa0526490:CDS |
| GAAGATGACAAAACATCAAG+TGG | 0.589082 | 3_4:+80376879 | Msa0526490:CDS |
| GCTCCTTTCCATGCTAGAAG+AGG | 0.590546 | 3_4:+80377685 | Msa0526490:CDS |
| AAACTAAGTCAACAACATGT+TGG | 0.592199 | 3_4:+80377092 | Msa0526490:CDS |
| ACGATTCAAACACAAATCCA+AGG | 0.592839 | 3_4:+80376921 | Msa0526490:CDS |
| ATCATCATTTACAAGATCAA+GGG | 0.598993 | 3_4:+80377420 | Msa0526490:CDS |
| ATTGTAAACCAATAGAGGAA+GGG | 0.599402 | 3_4:-80377373 | None:intergenic |
| ATACCTCTTCTAGCATGGAA+AGG | 0.599613 | 3_4:-80377688 | None:intergenic |
| TTGTTGTTCCAGGTGCAACA+GGG | 0.600884 | 3_4:-80378274 | None:intergenic |
| GAATTAATTTATATTATGAG+GGG | 0.604772 | 3_4:-80376778 | None:intergenic |
| GAGAGTGAAAGTCCTTGACT+TGG | 0.606569 | 3_4:-80377335 | None:intergenic |
| ATTCATCATCTTCACATCAG+TGG | 0.610423 | 3_4:+80377255 | Msa0526490:CDS |
| GTCTTTCATTACCTTCACAA+GGG | 0.619695 | 3_4:-80377313 | None:intergenic |
| ACACAACAAACTCTGTCATG+TGG | 0.622405 | 3_4:+80377051 | Msa0526490:CDS |
| AGACCACGTTGAGGTCTCCA+AGG | 0.624695 | 3_4:-80378383 | None:intergenic |
| CAACAAAGGGTGAAACACCT+AGG | 0.627180 | 3_4:+80378291 | Msa0526490:CDS |
| GATGACAAAACATCAAGTGG+TGG | 0.632307 | 3_4:+80376882 | Msa0526490:CDS |
| TTGTAATCAAATGAGGAGTG+TGG | 0.639918 | 3_4:+80378103 | Msa0526490:CDS |
| TGGGAAGATGATAACAACAA+TGG | 0.648007 | 3_4:+80377590 | Msa0526490:CDS |
| GGTAATGAAAGACCAAGTCA+AGG | 0.652296 | 3_4:+80377323 | Msa0526490:CDS |
| GAAGATGATAACAACAATGG+TGG | 0.654808 | 3_4:+80377593 | Msa0526490:CDS |
| GGAGCATGAAAAGCATAGTG+TGG | 0.654941 | 3_4:-80376757 | None:intergenic |
| TGATCAGAATCTAAACAACA+TGG | 0.698586 | 3_4:+80377205 | Msa0526490:CDS |
| AGATGTTTAATCTCACTACA+GGG | 0.700473 | 3_4:+80376961 | Msa0526490:CDS |
| CAATTCAACAAACTCTACAG+AGG | 0.717090 | 3_4:-80377645 | None:intergenic |
| CATCCTTGGAGACCTCAACG+TGG | 0.740668 | 3_4:+80378380 | Msa0526490:CDS |
| CGTTCAGGAAGACCACGTTG+AGG | 0.743992 | 3_4:-80378392 | None:intergenic |
| GAGAGTATATGATAGCATGG+AGG | 0.763200 | 3_4:+80376668 | Msa0526490:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TGAATTAATTTATATTATGA+GGG | - | chr3_4:80376782-80376801 | None:intergenic | 10.0% |
| !!! | TTTTGTGTATAATAATATTT+AGG | + | chr3_4:80378058-80378077 | Msa0526490:intron | 10.0% |
| !! | TGAATTAATTTATATTATGA+GGG | - | chr3_4:80376782-80376801 | None:intergenic | 10.0% |
| !!! | TTTTGTGTATAATAATATTT+AGG | + | chr3_4:80378058-80378077 | Msa0526490:intron | 10.0% |
| !! | GAATTAATTTATATTATGAG+GGG | - | chr3_4:80376781-80376800 | None:intergenic | 15.0% |
| !! | GTGAATTAATTTATATTATG+AGG | - | chr3_4:80376783-80376802 | None:intergenic | 15.0% |
| !!! | AGTTTGAAAATTTTTATTCA+TGG | + | chr3_4:80376839-80376858 | Msa0526490:exon | 15.0% |
| !! | TTATGACTTGAAATAAATTA+AGG | - | chr3_4:80377791-80377810 | None:intergenic | 15.0% |
| !! | GAATTAATTTATATTATGAG+GGG | - | chr3_4:80376781-80376800 | None:intergenic | 15.0% |
| !! | GTGAATTAATTTATATTATG+AGG | - | chr3_4:80376783-80376802 | None:intergenic | 15.0% |
| !!! | AGTTTGAAAATTTTTATTCA+TGG | + | chr3_4:80376839-80376858 | Msa0526490:exon | 15.0% |
| !! | TTATGACTTGAAATAAATTA+AGG | - | chr3_4:80377791-80377810 | None:intergenic | 15.0% |
| !! | TTGGTTGTATTTATAAATCT+TGG | + | chr3_4:80376582-80376601 | Msa0526490:five_prime_UTR | 20.0% |
| !!! | ATGATAGAAATTTTCATTCA+TGG | - | chr3_4:80377138-80377157 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTTCAATTGTCA+CGG | - | chr3_4:80377929-80377948 | None:intergenic | 20.0% |
| !!! | TGAAAACTAACAGTTTTTAT+TGG | - | chr3_4:80377974-80377993 | None:intergenic | 20.0% |
| !!! | AGTTTTCATCTTTATTTCTA+TGG | + | chr3_4:80377986-80378005 | Msa0526490:intron | 20.0% |
| !!! | ATAATATTTAGGTTGATAGA+AGG | + | chr3_4:80378069-80378088 | Msa0526490:intron | 20.0% |
| !! | TTGGTTGTATTTATAAATCT+TGG | + | chr3_4:80376582-80376601 | Msa0526490:five_prime_UTR | 20.0% |
| !!! | ATGATAGAAATTTTCATTCA+TGG | - | chr3_4:80377138-80377157 | None:intergenic | 20.0% |
| !! | TTAAAAAGTTTCAATTGTCA+CGG | - | chr3_4:80377929-80377948 | None:intergenic | 20.0% |
| !!! | TGAAAACTAACAGTTTTTAT+TGG | - | chr3_4:80377974-80377993 | None:intergenic | 20.0% |
| !!! | AGTTTTCATCTTTATTTCTA+TGG | + | chr3_4:80377986-80378005 | Msa0526490:intron | 20.0% |
| !!! | ATAATATTTAGGTTGATAGA+AGG | + | chr3_4:80378069-80378088 | Msa0526490:intron | 20.0% |
| ! | AAAAGATTGTAAACCAATAG+AGG | - | chr3_4:80377381-80377400 | None:intergenic | 25.0% |
| ! | AATCATCATTTACAAGATCA+AGG | + | chr3_4:80377419-80377438 | Msa0526490:CDS | 25.0% |
| ! | ATCATCATTTACAAGATCAA+GGG | + | chr3_4:80377420-80377439 | Msa0526490:CDS | 25.0% |
| !! | ATCAAAGACTCTTAACTTTT+TGG | + | chr3_4:80377810-80377829 | Msa0526490:intron | 25.0% |
| ! | TAAAAAGTTTCAATTGTCAC+GGG | - | chr3_4:80377928-80377947 | None:intergenic | 25.0% |
| ! | TATTGGTAAGAAAAGGAAAA+AGG | - | chr3_4:80377957-80377976 | None:intergenic | 25.0% |
| !! | CAGTTTTTATTGGTAAGAAA+AGG | - | chr3_4:80377964-80377983 | None:intergenic | 25.0% |
| !!! | TTTCATCTTTATTTCTATGG+TGG | + | chr3_4:80377989-80378008 | Msa0526490:intron | 25.0% |
| !!! | ATTTTAGGTGTTTGAAAGAT+GGG | + | chr3_4:80378204-80378223 | Msa0526490:CDS | 25.0% |
| ! | ATTTCAACAAATCAACATGA+TGG | + | chr3_4:80378352-80378371 | Msa0526490:CDS | 25.0% |
| ! | AAAAGATTGTAAACCAATAG+AGG | - | chr3_4:80377381-80377400 | None:intergenic | 25.0% |
| ! | AATCATCATTTACAAGATCA+AGG | + | chr3_4:80377419-80377438 | Msa0526490:CDS | 25.0% |
| ! | ATCATCATTTACAAGATCAA+GGG | + | chr3_4:80377420-80377439 | Msa0526490:CDS | 25.0% |
| !! | ATCAAAGACTCTTAACTTTT+TGG | + | chr3_4:80377810-80377829 | Msa0526490:intron | 25.0% |
| ! | TAAAAAGTTTCAATTGTCAC+GGG | - | chr3_4:80377928-80377947 | None:intergenic | 25.0% |
| ! | TATTGGTAAGAAAAGGAAAA+AGG | - | chr3_4:80377957-80377976 | None:intergenic | 25.0% |
| !! | CAGTTTTTATTGGTAAGAAA+AGG | - | chr3_4:80377964-80377983 | None:intergenic | 25.0% |
| !!! | TTTCATCTTTATTTCTATGG+TGG | + | chr3_4:80377989-80378008 | Msa0526490:intron | 25.0% |
| !!! | ATTTTAGGTGTTTGAAAGAT+GGG | + | chr3_4:80378204-80378223 | Msa0526490:CDS | 25.0% |
| ! | ATTTCAACAAATCAACATGA+TGG | + | chr3_4:80378352-80378371 | Msa0526490:CDS | 25.0% |
| ! | AAAGAGAGTATATGATAGCA+TGG | + | chr3_4:80376665-80376684 | Msa0526490:five_prime_UTR | 30.0% |
| AGATGTTTAATCTCACTACA+GGG | + | chr3_4:80376961-80376980 | Msa0526490:CDS | 30.0% | |
| AAGATGTTGTTGATGTTGTT+TGG | - | chr3_4:80377006-80377025 | None:intergenic | 30.0% | |
| ATGTGGAAAACAAATTTCTC+AGG | + | chr3_4:80377068-80377087 | Msa0526490:CDS | 30.0% | |
| AAACTAAGTCAACAACATGT+TGG | + | chr3_4:80377092-80377111 | Msa0526490:CDS | 30.0% | |
| !! | ATGGTTTTTGAAGAAGAAGA+GGG | - | chr3_4:80377119-80377138 | None:intergenic | 30.0% |
| TGAAATCTTGATGTTGTTGT+TGG | - | chr3_4:80377163-80377182 | None:intergenic | 30.0% | |
| TGATCAGAATCTAAACAACA+TGG | + | chr3_4:80377205-80377224 | Msa0526490:CDS | 30.0% | |
| ATTGTAAACCAATAGAGGAA+GGG | - | chr3_4:80377376-80377395 | None:intergenic | 30.0% | |
| ATAATATACCTCTTCTAGCA+TGG | - | chr3_4:80377696-80377715 | None:intergenic | 30.0% | |
| ! | ATGAGATTGGTGTCTTAATT+TGG | + | chr3_4:80377845-80377864 | Msa0526490:intron | 30.0% |
| AAAAAGTTTCAATTGTCACG+GGG | - | chr3_4:80377927-80377946 | None:intergenic | 30.0% | |
| AGCACTATTGTAATCAAATG+AGG | + | chr3_4:80378096-80378115 | Msa0526490:CDS | 30.0% | |
| ! | AAGCTATGTCAAGACATTTT+AGG | + | chr3_4:80378189-80378208 | Msa0526490:CDS | 30.0% |
| !! | CATTTTAGGTGTTTGAAAGA+TGG | + | chr3_4:80378203-80378222 | Msa0526490:CDS | 30.0% |
| TCAAACAACAAGAAAAGCAA+TGG | + | chr3_4:80378241-80378260 | Msa0526490:CDS | 30.0% | |
| CAAACAACAAGAAAAGCAAT+GGG | + | chr3_4:80378242-80378261 | Msa0526490:CDS | 30.0% | |
| !! | CTATCAAGTATTTTAAGCCT+AGG | - | chr3_4:80378311-80378330 | None:intergenic | 30.0% |
| ! | AAAGAGAGTATATGATAGCA+TGG | + | chr3_4:80376665-80376684 | Msa0526490:five_prime_UTR | 30.0% |
| AGATGTTTAATCTCACTACA+GGG | + | chr3_4:80376961-80376980 | Msa0526490:CDS | 30.0% | |
| AAGATGTTGTTGATGTTGTT+TGG | - | chr3_4:80377006-80377025 | None:intergenic | 30.0% | |
| ATGTGGAAAACAAATTTCTC+AGG | + | chr3_4:80377068-80377087 | Msa0526490:CDS | 30.0% | |
| AAACTAAGTCAACAACATGT+TGG | + | chr3_4:80377092-80377111 | Msa0526490:CDS | 30.0% | |
| !! | ATGGTTTTTGAAGAAGAAGA+GGG | - | chr3_4:80377119-80377138 | None:intergenic | 30.0% |
| TGAAATCTTGATGTTGTTGT+TGG | - | chr3_4:80377163-80377182 | None:intergenic | 30.0% | |
| TGATCAGAATCTAAACAACA+TGG | + | chr3_4:80377205-80377224 | Msa0526490:CDS | 30.0% | |
| ATTGTAAACCAATAGAGGAA+GGG | - | chr3_4:80377376-80377395 | None:intergenic | 30.0% | |
| ATAATATACCTCTTCTAGCA+TGG | - | chr3_4:80377696-80377715 | None:intergenic | 30.0% | |
| ! | ATGAGATTGGTGTCTTAATT+TGG | + | chr3_4:80377845-80377864 | Msa0526490:intron | 30.0% |
| AAAAAGTTTCAATTGTCACG+GGG | - | chr3_4:80377927-80377946 | None:intergenic | 30.0% | |
| AGCACTATTGTAATCAAATG+AGG | + | chr3_4:80378096-80378115 | Msa0526490:CDS | 30.0% | |
| ! | AAGCTATGTCAAGACATTTT+AGG | + | chr3_4:80378189-80378208 | Msa0526490:CDS | 30.0% |
| !! | CATTTTAGGTGTTTGAAAGA+TGG | + | chr3_4:80378203-80378222 | Msa0526490:CDS | 30.0% |
| TCAAACAACAAGAAAAGCAA+TGG | + | chr3_4:80378241-80378260 | Msa0526490:CDS | 30.0% | |
| CAAACAACAAGAAAAGCAAT+GGG | + | chr3_4:80378242-80378261 | Msa0526490:CDS | 30.0% | |
| !! | CTATCAAGTATTTTAAGCCT+AGG | - | chr3_4:80378311-80378330 | None:intergenic | 30.0% |
| CTTAACAAGTGATGAGTCAA+TGG | - | chr3_4:80376609-80376628 | None:intergenic | 35.0% | |
| GAAGATGACAAAACATCAAG+TGG | + | chr3_4:80376879-80376898 | Msa0526490:CDS | 35.0% | |
| TGGATTTGTGTTTGAATCGT+TGG | - | chr3_4:80376921-80376940 | None:intergenic | 35.0% | |
| ACGATTCAAACACAAATCCA+AGG | + | chr3_4:80376921-80376940 | Msa0526490:CDS | 35.0% | |
| !! | ACAAATCCAAGGTTTTGTGT+CGG | + | chr3_4:80376932-80376951 | Msa0526490:CDS | 35.0% |
| GTAGTGAGATTAAACATCTC+TGG | - | chr3_4:80376960-80376979 | None:intergenic | 35.0% | |
| GAGATGTTTAATCTCACTAC+AGG | + | chr3_4:80376960-80376979 | Msa0526490:CDS | 35.0% | |
| !! | CATGGTTTTTGAAGAAGAAG+AGG | - | chr3_4:80377120-80377139 | None:intergenic | 35.0% |
| ATTCATCATCTTCACATCAG+TGG | + | chr3_4:80377255-80377274 | Msa0526490:CDS | 35.0% | |
| GTCTTTCATTACCTTCACAA+GGG | - | chr3_4:80377316-80377335 | None:intergenic | 35.0% | |
| GATTGTAAACCAATAGAGGA+AGG | - | chr3_4:80377377-80377396 | None:intergenic | 35.0% | |
| !! | TTACAAGATCAAGGGTATCA+AGG | + | chr3_4:80377428-80377447 | Msa0526490:CDS | 35.0% |
| AGTTCAACAACAAGCAAAGT+TGG | + | chr3_4:80377570-80377589 | Msa0526490:CDS | 35.0% | |
| GTTCAACAACAAGCAAAGTT+GGG | + | chr3_4:80377571-80377590 | Msa0526490:CDS | 35.0% | |
| TGGGAAGATGATAACAACAA+TGG | + | chr3_4:80377590-80377609 | Msa0526490:CDS | 35.0% | |
| GAAGATGATAACAACAATGG+TGG | + | chr3_4:80377593-80377612 | Msa0526490:CDS | 35.0% | |
| CAATTCAACAAACTCTACAG+AGG | - | chr3_4:80377648-80377667 | None:intergenic | 35.0% | |
| !! | GTTGAAGTAGTTGATGAGAT+TGG | + | chr3_4:80377832-80377851 | Msa0526490:intron | 35.0% |
| TTGTAATCAAATGAGGAGTG+TGG | + | chr3_4:80378103-80378122 | Msa0526490:CDS | 35.0% | |
| TGCGAAAGTTTATTCAGCTT+TGG | + | chr3_4:80378160-80378179 | Msa0526490:CDS | 35.0% | |
| AGAATAGAAACAGAACGTTC+AGG | - | chr3_4:80378410-80378429 | None:intergenic | 35.0% | |
| !! | AACGTTCTGTTTCTATTCTC+AGG | + | chr3_4:80378411-80378430 | Msa0526490:CDS | 35.0% |
| !! | ACGTTCTGTTTCTATTCTCA+GGG | + | chr3_4:80378412-80378431 | Msa0526490:CDS | 35.0% |
| CTTAACAAGTGATGAGTCAA+TGG | - | chr3_4:80376609-80376628 | None:intergenic | 35.0% | |
| GAAGATGACAAAACATCAAG+TGG | + | chr3_4:80376879-80376898 | Msa0526490:CDS | 35.0% | |
| TGGATTTGTGTTTGAATCGT+TGG | - | chr3_4:80376921-80376940 | None:intergenic | 35.0% | |
| ACGATTCAAACACAAATCCA+AGG | + | chr3_4:80376921-80376940 | Msa0526490:CDS | 35.0% | |
| !! | ACAAATCCAAGGTTTTGTGT+CGG | + | chr3_4:80376932-80376951 | Msa0526490:CDS | 35.0% |
| GTAGTGAGATTAAACATCTC+TGG | - | chr3_4:80376960-80376979 | None:intergenic | 35.0% | |
| GAGATGTTTAATCTCACTAC+AGG | + | chr3_4:80376960-80376979 | Msa0526490:CDS | 35.0% | |
| !! | CATGGTTTTTGAAGAAGAAG+AGG | - | chr3_4:80377120-80377139 | None:intergenic | 35.0% |
| ATTCATCATCTTCACATCAG+TGG | + | chr3_4:80377255-80377274 | Msa0526490:CDS | 35.0% | |
| GTCTTTCATTACCTTCACAA+GGG | - | chr3_4:80377316-80377335 | None:intergenic | 35.0% | |
| GATTGTAAACCAATAGAGGA+AGG | - | chr3_4:80377377-80377396 | None:intergenic | 35.0% | |
| !! | TTACAAGATCAAGGGTATCA+AGG | + | chr3_4:80377428-80377447 | Msa0526490:CDS | 35.0% |
| AGTTCAACAACAAGCAAAGT+TGG | + | chr3_4:80377570-80377589 | Msa0526490:CDS | 35.0% | |
| GTTCAACAACAAGCAAAGTT+GGG | + | chr3_4:80377571-80377590 | Msa0526490:CDS | 35.0% | |
| TGGGAAGATGATAACAACAA+TGG | + | chr3_4:80377590-80377609 | Msa0526490:CDS | 35.0% | |
| GAAGATGATAACAACAATGG+TGG | + | chr3_4:80377593-80377612 | Msa0526490:CDS | 35.0% | |
| CAATTCAACAAACTCTACAG+AGG | - | chr3_4:80377648-80377667 | None:intergenic | 35.0% | |
| !! | GTTGAAGTAGTTGATGAGAT+TGG | + | chr3_4:80377832-80377851 | Msa0526490:intron | 35.0% |
| TTGTAATCAAATGAGGAGTG+TGG | + | chr3_4:80378103-80378122 | Msa0526490:CDS | 35.0% | |
| TGCGAAAGTTTATTCAGCTT+TGG | + | chr3_4:80378160-80378179 | Msa0526490:CDS | 35.0% | |
| AGAATAGAAACAGAACGTTC+AGG | - | chr3_4:80378410-80378429 | None:intergenic | 35.0% | |
| !! | AACGTTCTGTTTCTATTCTC+AGG | + | chr3_4:80378411-80378430 | Msa0526490:CDS | 35.0% |
| !! | ACGTTCTGTTTCTATTCTCA+GGG | + | chr3_4:80378412-80378431 | Msa0526490:CDS | 35.0% |
| ! | GAGAGTATATGATAGCATGG+AGG | + | chr3_4:80376668-80376687 | Msa0526490:five_prime_UTR | 40.0% |
| GAAGATGAGATAGCTAGAGA+GGG | - | chr3_4:80376706-80376725 | None:intergenic | 40.0% | |
| AGAAGATGAGATAGCTAGAG+AGG | - | chr3_4:80376707-80376726 | None:intergenic | 40.0% | |
| GATGACAAAACATCAAGTGG+TGG | + | chr3_4:80376882-80376901 | Msa0526490:CDS | 40.0% | |
| GTTTAATCTCACTACAGGGA+TGG | + | chr3_4:80376965-80376984 | Msa0526490:CDS | 40.0% | |
| ACACAACAAACTCTGTCATG+TGG | + | chr3_4:80377051-80377070 | Msa0526490:CDS | 40.0% | |
| ! | AGATGTGTTTTCCCTTGTGA+AGG | + | chr3_4:80377302-80377321 | Msa0526490:CDS | 40.0% |
| GGTCTTTCATTACCTTCACA+AGG | - | chr3_4:80377317-80377336 | None:intergenic | 40.0% | |
| GGTAATGAAAGACCAAGTCA+AGG | + | chr3_4:80377323-80377342 | Msa0526490:CDS | 40.0% | |
| TCAACAAACCCTTCCTCTAT+TGG | + | chr3_4:80377365-80377384 | Msa0526490:CDS | 40.0% | |
| TCATTGAGAAGTTCTTGTGC+TGG | - | chr3_4:80377488-80377507 | None:intergenic | 40.0% | |
| ATACCTCTTCTAGCATGGAA+AGG | - | chr3_4:80377691-80377710 | None:intergenic | 40.0% | |
| ! | TCATCATTTGAAGCTGTAGC+TGG | + | chr3_4:80378128-80378147 | Msa0526490:CDS | 40.0% |
| ! | TTTGAAGCTGTAGCTGGAAA+TGG | + | chr3_4:80378134-80378153 | Msa0526490:CDS | 40.0% |
| ! | ACATGATGGAAACACATCCT+TGG | + | chr3_4:80378366-80378385 | Msa0526490:CDS | 40.0% |
| ! | GAGAGTATATGATAGCATGG+AGG | + | chr3_4:80376668-80376687 | Msa0526490:five_prime_UTR | 40.0% |
| GAAGATGAGATAGCTAGAGA+GGG | - | chr3_4:80376706-80376725 | None:intergenic | 40.0% | |
| AGAAGATGAGATAGCTAGAG+AGG | - | chr3_4:80376707-80376726 | None:intergenic | 40.0% | |
| GATGACAAAACATCAAGTGG+TGG | + | chr3_4:80376882-80376901 | Msa0526490:CDS | 40.0% | |
| GTTTAATCTCACTACAGGGA+TGG | + | chr3_4:80376965-80376984 | Msa0526490:CDS | 40.0% | |
| ACACAACAAACTCTGTCATG+TGG | + | chr3_4:80377051-80377070 | Msa0526490:CDS | 40.0% | |
| ! | AGATGTGTTTTCCCTTGTGA+AGG | + | chr3_4:80377302-80377321 | Msa0526490:CDS | 40.0% |
| GGTCTTTCATTACCTTCACA+AGG | - | chr3_4:80377317-80377336 | None:intergenic | 40.0% | |
| GGTAATGAAAGACCAAGTCA+AGG | + | chr3_4:80377323-80377342 | Msa0526490:CDS | 40.0% | |
| TCAACAAACCCTTCCTCTAT+TGG | + | chr3_4:80377365-80377384 | Msa0526490:CDS | 40.0% | |
| TCATTGAGAAGTTCTTGTGC+TGG | - | chr3_4:80377488-80377507 | None:intergenic | 40.0% | |
| ATACCTCTTCTAGCATGGAA+AGG | - | chr3_4:80377691-80377710 | None:intergenic | 40.0% | |
| ! | TCATCATTTGAAGCTGTAGC+TGG | + | chr3_4:80378128-80378147 | Msa0526490:CDS | 40.0% |
| ! | TTTGAAGCTGTAGCTGGAAA+TGG | + | chr3_4:80378134-80378153 | Msa0526490:CDS | 40.0% |
| ! | ACATGATGGAAACACATCCT+TGG | + | chr3_4:80378366-80378385 | Msa0526490:CDS | 40.0% |
| ! | GGAGCATGAAAAGCATAGTG+TGG | - | chr3_4:80376760-80376779 | None:intergenic | 45.0% |
| ACTACAGGGATGGAGATGAT+AGG | + | chr3_4:80376975-80376994 | Msa0526490:CDS | 45.0% | |
| GAGAGTGAAAGTCCTTGACT+TGG | - | chr3_4:80377338-80377357 | None:intergenic | 45.0% | |
| TTTCAATTGTCACGGGGTGA+AGG | - | chr3_4:80377921-80377940 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCCAGGTGCAACA+GGG | - | chr3_4:80378277-80378296 | None:intergenic | 45.0% |
| !! | TTTGTTGTTCCAGGTGCAAC+AGG | - | chr3_4:80378278-80378297 | None:intergenic | 45.0% |
| TGTTGCACCTGGAACAACAA+AGG | + | chr3_4:80378277-80378296 | Msa0526490:CDS | 45.0% | |
| GTTGCACCTGGAACAACAAA+GGG | + | chr3_4:80378278-80378297 | Msa0526490:CDS | 45.0% | |
| !! | GTTTCACCCTTTGTTGTTCC+AGG | - | chr3_4:80378287-80378306 | None:intergenic | 45.0% |
| CAACAAAGGGTGAAACACCT+AGG | + | chr3_4:80378291-80378310 | Msa0526490:CDS | 45.0% | |
| !! | CTGTTTCTATTCTCAGGGCT+TGG | + | chr3_4:80378417-80378436 | Msa0526490:CDS | 45.0% |
| ! | GGAGCATGAAAAGCATAGTG+TGG | - | chr3_4:80376760-80376779 | None:intergenic | 45.0% |
| ACTACAGGGATGGAGATGAT+AGG | + | chr3_4:80376975-80376994 | Msa0526490:CDS | 45.0% | |
| GAGAGTGAAAGTCCTTGACT+TGG | - | chr3_4:80377338-80377357 | None:intergenic | 45.0% | |
| TTTCAATTGTCACGGGGTGA+AGG | - | chr3_4:80377921-80377940 | None:intergenic | 45.0% | |
| ! | TTGTTGTTCCAGGTGCAACA+GGG | - | chr3_4:80378277-80378296 | None:intergenic | 45.0% |
| !! | TTTGTTGTTCCAGGTGCAAC+AGG | - | chr3_4:80378278-80378297 | None:intergenic | 45.0% |
| TGTTGCACCTGGAACAACAA+AGG | + | chr3_4:80378277-80378296 | Msa0526490:CDS | 45.0% | |
| GTTGCACCTGGAACAACAAA+GGG | + | chr3_4:80378278-80378297 | Msa0526490:CDS | 45.0% | |
| !! | GTTTCACCCTTTGTTGTTCC+AGG | - | chr3_4:80378287-80378306 | None:intergenic | 45.0% |
| CAACAAAGGGTGAAACACCT+AGG | + | chr3_4:80378291-80378310 | Msa0526490:CDS | 45.0% | |
| !! | CTGTTTCTATTCTCAGGGCT+TGG | + | chr3_4:80378417-80378436 | Msa0526490:CDS | 45.0% |
| CTGGATCCGACACAAAACCT+TGG | - | chr3_4:80376941-80376960 | None:intergenic | 50.0% | |
| GCTCCTTTCCATGCTAGAAG+AGG | + | chr3_4:80377685-80377704 | Msa0526490:CDS | 50.0% | |
| GAAAAAGACCCTGTTGCACC+TGG | + | chr3_4:80378266-80378285 | Msa0526490:CDS | 50.0% | |
| CTGGATCCGACACAAAACCT+TGG | - | chr3_4:80376941-80376960 | None:intergenic | 50.0% | |
| GCTCCTTTCCATGCTAGAAG+AGG | + | chr3_4:80377685-80377704 | Msa0526490:CDS | 50.0% | |
| GAAAAAGACCCTGTTGCACC+TGG | + | chr3_4:80378266-80378285 | Msa0526490:CDS | 50.0% | |
| CATCCTTGGAGACCTCAACG+TGG | + | chr3_4:80378380-80378399 | Msa0526490:CDS | 55.0% | |
| AGACCACGTTGAGGTCTCCA+AGG | - | chr3_4:80378386-80378405 | None:intergenic | 55.0% | |
| CGTTCAGGAAGACCACGTTG+AGG | - | chr3_4:80378395-80378414 | None:intergenic | 55.0% | |
| CATCCTTGGAGACCTCAACG+TGG | + | chr3_4:80378380-80378399 | Msa0526490:CDS | 55.0% | |
| AGACCACGTTGAGGTCTCCA+AGG | - | chr3_4:80378386-80378405 | None:intergenic | 55.0% | |
| CGTTCAGGAAGACCACGTTG+AGG | - | chr3_4:80378395-80378414 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 80376578 | 80378466 | 80376578 | ID=Msa0526490;Name=Msa0526490 |
| chr3_4 | mRNA | 80376578 | 80378466 | 80376578 | ID=Msa0526490-mRNA-1;Parent=Msa0526490;Name=Msa0526490-mRNA-1;_AED=0.27;_eAED=0.27;_QI=280|1|0.5|1|1|1|2|0|411 |
| chr3_4 | exon | 80376578 | 80377706 | 80376578 | ID=Msa0526490-mRNA-1:exon:24142;Parent=Msa0526490-mRNA-1 |
| chr3_4 | exon | 80378080 | 80378466 | 80378080 | ID=Msa0526490-mRNA-1:exon:24143;Parent=Msa0526490-mRNA-1 |
| chr3_4 | five_prime_UTR | 80376578 | 80376857 | 80376578 | ID=Msa0526490-mRNA-1:five_prime_utr;Parent=Msa0526490-mRNA-1 |
| chr3_4 | CDS | 80376858 | 80377706 | 80376858 | ID=Msa0526490-mRNA-1:cds;Parent=Msa0526490-mRNA-1 |
| chr3_4 | CDS | 80378080 | 80378466 | 80378080 | ID=Msa0526490-mRNA-1:cds;Parent=Msa0526490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
