AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186010


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186010 MtrunA17_Chr8g0352321 94.251 487 7 1 1 466 1 487 0.0 939
Msa1186010 MtrunA17_Chr8g0352311 79.466 487 77 2 1 466 39 523 0.0 801
Msa1186010 MtrunA17_Chr8g0352301 79.055 487 79 2 1 466 38 522 0.0 788
Msa1186010 MtrunA17_Chr8g0352261 78.850 487 80 2 1 466 38 522 0.0 784
Msa1186010 MtrunA17_Chr8g0376401 36.207 464 249 11 28 466 116 557 8.16e-85 274
Msa1186010 MtrunA17_Chr5g0407951 35.256 468 246 11 33 466 84 528 1.93e-83 270
Msa1186010 MtrunA17_Chr5g0407941 34.615 468 248 11 33 466 83 526 6.56e-80 260
Msa1186010 MtrunA17_Chr5g0407931 33.548 465 257 8 33 466 124 567 4.88e-79 259
Msa1186010 MtrunA17_Chr2g0312951 33.264 481 261 14 22 466 105 561 4.18e-76 251
Msa1186010 MtrunA17_Chr3g0140121 28.370 497 297 19 15 466 54 536 1.36e-42 160
Msa1186010 MtrunA17_Chr3g0140171 24.107 448 272 19 63 464 96 521 4.42e-12 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186010 AT3G63520.1 75.884 481 92 2 7 466 8 485 0.0 771
Msa1186010 AT1G78390.1 34.968 469 251 12 43 480 179 624 3.17e-83 271
Msa1186010 AT3G14440.1 35.011 437 234 10 43 449 119 535 1.23e-80 263
Msa1186010 AT1G30100.1 34.426 488 259 17 16 466 77 540 3.58e-79 259
Msa1186010 AT4G19170.1 33.554 453 258 8 43 466 107 545 4.31e-78 256
Msa1186010 AT3G24220.1 35.385 455 239 12 43 466 97 527 1.20e-75 249
Msa1186010 AT4G18350.1 32.409 469 261 13 30 463 84 531 1.44e-70 236

Find 132 sgRNAs with CRISPR-Local

Find 699 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGAGAATTATTCAATATTTA+TGG 0.093428 8_1:-23913428 Msa1186010:CDS
TTCAAAAGCTGTTGATTTAT+TGG 0.115946 8_1:-23916952 Msa1186010:CDS
CCACCAACCATGTCCAAATT+TGG 0.165934 8_1:+23912692 None:intergenic
TTGAGATTTACGTAAATAAA+TGG 0.183829 8_1:+23917065 None:intergenic
ATTAAGGATCTTCCTGTTAA+AGG 0.215774 8_1:-23916837 Msa1186010:CDS
GACACCGAAACGAGCTTTCT+TGG 0.237538 8_1:+23913136 None:intergenic
AGGTCTATTTGGACTGTTAA+TGG 0.245813 8_1:-23914845 Msa1186010:CDS
TTGCACGCCAAACCGGATTC+TGG 0.264724 8_1:-23911777 Msa1186010:CDS
CTTCCTCATCATTGGCTTGC+TGG 0.265421 8_1:-23916894 Msa1186010:CDS
AGGAAACAACGATATGTATA+TGG 0.271473 8_1:-23911849 Msa1186010:CDS
AAGATGGCTTCACCAGTAAA+TGG 0.271755 8_1:+23913660 None:intergenic
CCAAAAGTTGATCCATTTAC+TGG 0.272102 8_1:-23913672 Msa1186010:intron
CCAGTAAATGGATCAACTTT+TGG 0.282327 8_1:+23913672 None:intergenic
GCTTGAATGGAGAGTTTGTT+AGG 0.282351 8_1:-23915467 Msa1186010:CDS
GACAGCATTGCTAAAGTTAC+TGG 0.285170 8_1:-23911816 Msa1186010:CDS
GTGAAACCATTACTGGGTTT+TGG 0.289995 8_1:+23916975 None:intergenic
CCGCCTGGAGAATCCAAATT+TGG 0.295049 8_1:-23912705 Msa1186010:CDS
GGAGATATGAAAGGTCTATT+TGG 0.302272 8_1:-23914856 Msa1186010:CDS
TGGATCTTCCTCTGTACTTC+AGG 0.303842 8_1:-23913408 Msa1186010:CDS
TTAACAGGAAGATCCTTAAT+AGG 0.316401 8_1:+23916840 None:intergenic
GGATGAAACACCTCCTATTA+AGG 0.318997 8_1:-23916853 Msa1186010:CDS
ATTAATTGCAGAATGATTCA+TGG 0.337054 8_1:-23915091 Msa1186010:intron
AAAGTAGTGGACGTTTCTTA+TGG 0.344540 8_1:-23914793 Msa1186010:CDS
AAAATGGAGTCTGAGAAAAT+TGG 0.345727 8_1:-23917020 Msa1186010:CDS
GCCTCAGAGCCAAACCTTCC+TGG 0.349612 8_1:+23911702 None:intergenic
ACCGGAGAAAACTTCGGATT+TGG 0.349908 8_1:+23915438 None:intergenic
GACTTGGGACCAGGAAGGTT+TGG 0.351958 8_1:-23911711 Msa1186010:CDS
AATGTCATTATCTTGGACTT+AGG 0.352490 8_1:-23904734 None:intergenic
TTTAGCAATGCTGTCTAATT+CGG 0.353969 8_1:+23911824 None:intergenic
TAGGACAAATGTCATTATCT+TGG 0.357717 8_1:-23904741 Msa1186010:CDS
GGAGGTGTTTCATCCTTAAC+AGG 0.362441 8_1:+23916861 None:intergenic
ATTCATCACTTCCTCATCAT+TGG 0.368226 8_1:-23916902 Msa1186010:CDS
CTAACACAAACTCAACAAAA+TGG 0.372719 8_1:-23917036 Msa1186010:exon
TCTGATATTGTTACGGGAAC+AGG 0.381111 8_1:+23913481 None:intergenic
GCAGGAGAGATGTTTACATT+TGG 0.403512 8_1:-23913568 Msa1186010:intron
TCTTTACCTTAGCCAATGCT+TGG 0.407508 8_1:-23912760 Msa1186010:intron
ATTGGCTCTGATATTGTTAC+GGG 0.408173 8_1:+23913475 None:intergenic
TTGGATGAGCGGTGAAGTTA+TGG 0.413500 8_1:+23913691 None:intergenic
TCCTGTTAAAGGCTCTCTTC+CGG 0.414475 8_1:-23916826 Msa1186010:intron
TCTTCTTCAGAATCGGTGCC+AGG 0.421737 8_1:+23911660 None:intergenic
GCTAGATTATGACAAGAGAT+TGG 0.425301 8_1:-23913715 Msa1186010:CDS
ACCGGAAGAGAGCCTTTAAC+AGG 0.430817 8_1:+23916825 None:intergenic
GATTGGCTCTGATATTGTTA+CGG 0.435381 8_1:+23913474 None:intergenic
AACTTCCATAGTGGCATAGC+TGG 0.435599 8_1:+23917126 None:intergenic
CTTTACCTTAGCCAATGCTT+GGG 0.437160 8_1:-23912759 Msa1186010:intron
CTTAAACAAGAAGAATACTT+TGG 0.438573 8_1:-23915010 Msa1186010:CDS
GTTTCTTATGGACATGGAAC+AGG 0.440259 8_1:-23914781 Msa1186010:intron
GGCAATTCTACAACTGCAAC+AGG 0.440433 8_1:+23911196 None:intergenic
TGGAGGAGGAATTGTGAAAG+TGG 0.440950 8_1:-23917000 Msa1186010:CDS
ATGTCATTATCTTGGACTTA+GGG 0.442399 8_1:-23904733 None:intergenic
ATTTGATTTGCACGCCAAAC+CGG 0.445422 8_1:-23911784 Msa1186010:CDS
CCAAATTTGGACATGGTTGG+TGG 0.451073 8_1:-23912692 Msa1186010:CDS
CTAGGCCAGCTATGCCACTA+TGG 0.453044 8_1:-23917131 Msa1186010:five_prime_UTR
CATGGTTTGCGTATCAAAGA+TGG 0.453334 8_1:-23915073 Msa1186010:CDS
ATCCTCCTCCTCCCAAGCAT+TGG 0.456122 8_1:+23912748 None:intergenic
GTATTGTAGGATTGCTTGAA+TGG 0.457791 8_1:-23915480 Msa1186010:intron
ATTACTCTGTATGTGATATA+CGG 0.461485 8_1:+23913529 None:intergenic
GTTTATGTTCCGTGTGTCCC+TGG 0.464151 8_1:-23911678 Msa1186010:CDS
TGGAGGCTCTAAATTTATGA+AGG 0.466863 8_1:-23914990 Msa1186010:intron
ATGAGATTTAACATGAAAAC+CGG 0.468570 8_1:-23912538 Msa1186010:CDS
TCCATCATCTTCTTCAGAAT+CGG 0.469924 8_1:+23911653 None:intergenic
TTGTGGAATATGAAGCAGTT+TGG 0.470038 8_1:+23913065 None:intergenic
AAACCATATGGAACTCTTTG+AGG 0.470142 8_1:+23911175 None:intergenic
CATCTGCTGTAGATTTCCCT+AGG 0.474704 8_1:-23912489 Msa1186010:CDS
AAGAAAGCATGGAAACCATA+TGG 0.478252 8_1:+23911163 None:intergenic
GTCGTGGGTCACTATGACTT+GGG 0.479616 8_1:-23911726 Msa1186010:CDS
GCAAAGTCATGCATCATGAT+TGG 0.480089 8_1:+23913457 None:intergenic
ACCAGGAAGGTTTGGCTCTG+AGG 0.485498 8_1:-23911703 Msa1186010:CDS
TCGACCAAGAAAGCTCGTTT+CGG 0.486917 8_1:-23913140 Msa1186010:CDS
TGCTTTCTTGTCATTGTCTG+AGG 0.490316 8_1:+23917210 None:intergenic
TTGCCTCAAAGAGTTCCATA+TGG 0.490409 8_1:-23911178 Msa1186010:CDS
GCAATTTCAATTATTAATTG+TGG 0.493641 8_1:-23917236 Msa1186010:five_prime_UTR
AAACAAGAAGAATACTTTGG+AGG 0.494373 8_1:-23915007 Msa1186010:CDS
CTAGATTATGACAAGAGATT+GGG 0.494625 8_1:-23913714 Msa1186010:CDS
GACGGTGATTTGCAGACACT+TGG 0.499026 8_1:-23913741 Msa1186010:CDS
AGCCAATGCTTGGGAGGAGG+AGG 0.499414 8_1:-23912750 Msa1186010:CDS
GTATGGTTTAACTTCCATAG+TGG 0.500750 8_1:+23917117 None:intergenic
AGGATGAAAAGCATATTAGA+TGG 0.501778 8_1:-23913097 Msa1186010:CDS
GGTCACTATGACTTGGGACC+AGG 0.509852 8_1:-23911720 Msa1186010:CDS
GTGTAGCTTTCATTCACCCT+AGG 0.512242 8_1:+23912472 None:intergenic
TGTCCAAATTTGGATTCTCC+AGG 0.512719 8_1:+23912702 None:intergenic
CTTGAATGGAGAGTTTGTTA+GGG 0.512907 8_1:-23915466 Msa1186010:CDS
GGAAACAACGATATGTATAT+GGG 0.513306 8_1:-23911848 Msa1186010:CDS
CTTAGCCAATGCTTGGGAGG+AGG 0.518662 8_1:-23912753 Msa1186010:intron
CATCCTTAGCATAGCGGGGT+AGG 0.519970 8_1:+23913114 None:intergenic
TGAATGAAAGCTACACTGGC+AGG 0.520899 8_1:-23912465 Msa1186010:intron
ATACTTACGTGGCAGTTGCT+AGG 0.522697 8_1:-23917149 Msa1186010:five_prime_UTR
TTTGCAGGTTTGACGGAGAT+GGG 0.523329 8_1:-23915194 Msa1186010:intron
CTCCGGTGGCTGGATATCAC+TGG 0.525346 8_1:-23915422 Msa1186010:intron
AATGGAGAGTTTGTTAGGGT+GGG 0.528148 8_1:-23915462 Msa1186010:CDS
TACCTTAGCCAATGCTTGGG+AGG 0.535547 8_1:-23912756 Msa1186010:intron
TGTCGTGGGTCACTATGACT+TGG 0.554747 8_1:-23911727 Msa1186010:CDS
GAATGGAGAGTTTGTTAGGG+TGG 0.554974 8_1:-23915463 Msa1186010:CDS
AATCCAAATTTGGACATGGT+TGG 0.555139 8_1:-23912695 Msa1186010:CDS
TACAGAGTAATTTCAAAGGA+CGG 0.555209 8_1:-23913517 Msa1186010:CDS
TTTCAGATTGGAGATATGAA+AGG 0.556738 8_1:-23914865 Msa1186010:intron
CATGGTTGGTGGAGCTGTCA+AGG 0.568173 8_1:-23912681 Msa1186010:CDS
TGTCCTACCCCGCTATGCTA+AGG 0.570207 8_1:-23913117 Msa1186010:CDS
ATGGAGTCTGAGAAAATTGG+AGG 0.570269 8_1:-23917017 Msa1186010:CDS
AAAACGAAGCTTGAAGTTGG+AGG 0.570750 8_1:-23911753 Msa1186010:CDS
CCATGCTTTCTTTGTCACAG+AGG 0.570897 8_1:-23911152 Msa1186010:intron
ACAGCATTGCTAAAGTTACT+GGG 0.572501 8_1:-23911815 Msa1186010:CDS
TGTAGCTTTCATTCACCCTA+GGG 0.572763 8_1:+23912473 None:intergenic
CTTCTTCAGAATCGGTGCCA+GGG 0.573834 8_1:+23911661 None:intergenic
CCTCTGTGACAAAGAAAGCA+TGG 0.578292 8_1:+23911152 None:intergenic
TCCTCTGTACTTCAGGCCAA+AGG 0.581311 8_1:-23913401 Msa1186010:intron
ATCTGCTGTAGATTTCCCTA+GGG 0.585908 8_1:-23912488 Msa1186010:CDS
GTGGAACCAAAACCCAGTAA+TGG 0.586245 8_1:-23916981 Msa1186010:CDS
ACAGGAAGATCCTTAATAGG+AGG 0.591560 8_1:+23916843 None:intergenic
GAGTCTGAGAAAATTGGAGG+AGG 0.592752 8_1:-23917014 Msa1186010:CDS
ACCGATTCTGAAGAAGATGA+TGG 0.593846 8_1:-23911654 Msa1186010:CDS
CCAGCCACCGGAGAAAACTT+CGG 0.599417 8_1:+23915432 None:intergenic
GAATCGGTGCCAGGGACACA+CGG 0.603995 8_1:+23911669 None:intergenic
TACCAGTGATATCCAGCCAC+CGG 0.608877 8_1:+23915420 None:intergenic
GCGAGCTAAATTGAAAGTAG+TGG 0.610645 8_1:-23914806 Msa1186010:CDS
TTTGAAGTGAAACCATTACT+GGG 0.614262 8_1:+23916969 None:intergenic
GGAGAATCCAAATTTGGACA+TGG 0.618074 8_1:-23912699 Msa1186010:CDS
AGGGTGAATGAAAGCTACAC+TGG 0.618223 8_1:-23912469 Msa1186010:CDS
GACAAGAAAGCACAAAGAGG+AGG 0.620258 8_1:-23917199 Msa1186010:five_prime_UTR
CACATACAGAGTAATTTCAA+AGG 0.630370 8_1:-23913521 Msa1186010:CDS
TGAAGTTGGAGGAAATGTCG+TGG 0.631155 8_1:-23911742 Msa1186010:CDS
GAAGTTGGAGGAAATGTCGT+GGG 0.632004 8_1:-23911741 Msa1186010:CDS
GTGGACGTTTCTTATGGACA+TGG 0.639605 8_1:-23914787 Msa1186010:CDS
CCAAATTTGGATTCTCCAGG+CGG 0.643781 8_1:+23912705 None:intergenic
TTACCAGCAAGCCAATGATG+AGG 0.659060 8_1:+23916891 None:intergenic
AATGACAAGAAAGCACAAAG+AGG 0.661083 8_1:-23917202 Msa1186010:five_prime_UTR
AGCAAACAAACATACCATTG+TGG 0.663196 8_1:+23913048 None:intergenic
ACTATGACTTGGGACCAGGA+AGG 0.672545 8_1:-23911716 Msa1186010:CDS
ACCTTTGGCCTGAAGTACAG+AGG 0.676547 8_1:+23913400 None:intergenic
AACTGCTTCATATTCCACAA+TGG 0.682536 8_1:-23913062 Msa1186010:intron
TTAGAATCTTCATACTTACG+TGG 0.729023 8_1:-23917160 Msa1186010:five_prime_UTR
ACTCTGTATGTGATATACGG+TGG 0.785429 8_1:+23913532 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTAATTTTAAAAATTTA+CGG + chr8_1:23917113-23917132 None:intergenic 0.0%
!! AAAAAAAGTAAACTTAAATT+TGG - chr8_1:23905427-23905446 Msa1186010:intron 10.0%
!!! TTAAAAAGTTAACTTTTTAA+AGG + chr8_1:23905847-23905866 None:intergenic 10.0%
!!! TAAATTTTAATGAAATTTTG+GGG + chr8_1:23911291-23911310 None:intergenic 10.0%
!!! GTAAATTTTAATGAAATTTT+GGG + chr8_1:23911292-23911311 None:intergenic 10.0%
!!! TGTAAATTTTAATGAAATTT+TGG + chr8_1:23911293-23911312 None:intergenic 10.0%
!!! TTGTGTTTTTTTTTTTTTTT+TGG + chr8_1:23911901-23911920 None:intergenic 10.0%
!! AAAAAAAAAAAAAAACACAA+TGG - chr8_1:23911901-23911920 Msa1186010:intron 10.0%
!! AAAAAAAAAAAAAACACAAT+GGG - chr8_1:23911902-23911921 Msa1186010:intron 10.0%
!!! GATGATTTATTTTATTATAA+GGG - chr8_1:23911924-23911943 Msa1186010:intron 10.0%
!!! TTTATTTTCTGAATTTTATA+TGG - chr8_1:23913524-23913543 Msa1186010:CDS 10.0%
!!! TTATTTTCTGAATTTTATAT+GGG - chr8_1:23913525-23913544 Msa1186010:CDS 10.0%
!!! TTTTAAACTAATAATGAAAA+AGG - chr8_1:23914342-23914361 Msa1186010:intron 10.0%
!!! TTTATTACTTTTGAATTATA+TGG + chr8_1:23916208-23916227 None:intergenic 10.0%
!!! ATATAACTCATAATTTTTTT+TGG - chr8_1:23916278-23916297 Msa1186010:intron 10.0%
!! TAGTTTATTTAACATATTAT+GGG + chr8_1:23916314-23916333 None:intergenic 10.0%
!! ATAGTTTATTTAACATATTA+TGG + chr8_1:23916315-23916334 None:intergenic 10.0%
!! AATGAAATATAATTTAATGA+AGG - chr8_1:23916688-23916707 Msa1186010:intron 10.0%
!!! ATTAATTTTAAAAATTTACG+GGG + chr8_1:23917111-23917130 None:intergenic 10.0%
!!! AAATTAATTTTAAAGATTGA+AGG - chr8_1:23917123-23917142 Msa1186010:five_prime_UTR 10.0%
!!! AATTAATTTTAAAGATTGAA+GGG - chr8_1:23917124-23917143 Msa1186010:five_prime_UTR 10.0%
!!! TTTTTTTTTTTACACTAGAA+TGG - chr8_1:23905804-23905823 Msa1186010:intron 15.0%
!!! AAAAAGTTAACTTTTTAAGT+TGG - chr8_1:23905849-23905868 Msa1186010:intron 15.0%
!!! TGTAAAATATTTTATAGGTT+TGG - chr8_1:23906078-23906097 Msa1186010:intron 15.0%
!!! ATTTTTAAGTAATTTATGCA+AGG - chr8_1:23906103-23906122 Msa1186010:intron 15.0%
!!! TGTATTTAGTTTTTATAGAA+AGG - chr8_1:23906705-23906724 Msa1186010:intron 15.0%
!!! TTCATTTAAGTTAAAAAGAA+AGG + chr8_1:23907702-23907721 None:intergenic 15.0%
!! CAATTAGAAAAATTATTTGT+TGG + chr8_1:23908430-23908449 None:intergenic 15.0%
!! AGAGAATTATTCAATATTTA+TGG - chr8_1:23908589-23908608 Msa1186010:intron 15.0%
!! GTATTAAAATAAAATGAACA+AGG + chr8_1:23909113-23909132 None:intergenic 15.0%
!! TTTAAATTCTTTAATTCTGA+TGG - chr8_1:23909202-23909221 Msa1186010:intron 15.0%
!! ATCATATAAAAGATGAAAAT+GGG + chr8_1:23909233-23909252 None:intergenic 15.0%
!! AATCATATAAAAGATGAAAA+TGG + chr8_1:23909234-23909253 None:intergenic 15.0%
!! GAAATGAAAATAATAAACAT+AGG + chr8_1:23910145-23910164 None:intergenic 15.0%
!!! TTTATTATTTTCATTTCATC+AGG - chr8_1:23910148-23910167 Msa1186010:intron 15.0%
!! ATATAAAAATAAGAGATTAC+GGG + chr8_1:23910642-23910661 None:intergenic 15.0%
!! CATATAAAAATAAGAGATTA+CGG + chr8_1:23910643-23910662 None:intergenic 15.0%
!!! AAAACAAATTATTTCTTTGA+TGG + chr8_1:23911059-23911078 None:intergenic 15.0%
!!! TTCTTTAGAAAAATAGTAAA+TGG - chr8_1:23911153-23911172 Msa1186010:CDS 15.0%
!!! TCTTTAGAAAAATAGTAAAT+GGG - chr8_1:23911154-23911173 Msa1186010:CDS 15.0%
!! AAATGATATATAAACATCAA+TGG + chr8_1:23911870-23911889 None:intergenic 15.0%
!!! GGATGATTTATTTTATTATA+AGG - chr8_1:23911923-23911942 Msa1186010:intron 15.0%
!!! AAATATACATTTTAAAACTG+TGG - chr8_1:23913279-23913298 Msa1186010:intron 15.0%
!! AGTAAATTATGTTTAGTATA+CGG + chr8_1:23913370-23913389 None:intergenic 15.0%
!! AAATTCATCAATAATTTAGA+TGG + chr8_1:23913414-23913433 None:intergenic 15.0%
!!! CTATATATTTTTTCTTTCAT+CGG + chr8_1:23913738-23913757 None:intergenic 15.0%
!! AATTTGTATAAAATGTAAAG+TGG + chr8_1:23913928-23913947 None:intergenic 15.0%
!!! TGATTATTAGTGTATATTTT+CGG - chr8_1:23915879-23915898 Msa1186010:intron 15.0%
!! TATAAAATGTCCATATAATT+CGG - chr8_1:23915958-23915977 Msa1186010:intron 15.0%
!!! CTTTTTTCTTTTATTTTTGA+AGG + chr8_1:23916007-23916026 None:intergenic 15.0%
!!! TACACATAATTTTTTTTTTG+TGG - chr8_1:23916253-23916272 Msa1186010:intron 15.0%
!!! TTAATAGAGAAAATTTTAGA+TGG + chr8_1:23916613-23916632 None:intergenic 15.0%
!!! CAAATAAATAGTTTGAAATA+AGG - chr8_1:23916725-23916744 Msa1186010:intron 15.0%
!!! TGATTAAAATTCATTTTTTG+TGG + chr8_1:23916899-23916918 None:intergenic 15.0%
!!! TTATTTTAAAAACAAAGCTT+AGG + chr8_1:23916959-23916978 None:intergenic 15.0%
!!! AAGCTTTGTTTTTAAAATAA+AGG - chr8_1:23916959-23916978 Msa1186010:CDS 15.0%
!!! AATAATATAACCCTTTTTTT+TGG + chr8_1:23917168-23917187 None:intergenic 15.0%
!! GCAATTTCAATTATTAATTG+TGG - chr8_1:23904781-23904800 Msa1186010:intron 20.0%
!! TTGAGATTTACGTAAATAAA+TGG + chr8_1:23904955-23904974 None:intergenic 20.0%
!! AAAAAATCAATTATCACTAC+TGG + chr8_1:23905361-23905380 None:intergenic 20.0%
!! TTTAGTTAAAAGTGAGTTTA+AGG - chr8_1:23905565-23905584 Msa1186010:intron 20.0%
!! AAGGTAAAACAATTTATGTT+TGG - chr8_1:23905584-23905603 Msa1186010:intron 20.0%
!! ATATAAAAGCTACTAATCAT+AGG - chr8_1:23905646-23905665 Msa1186010:intron 20.0%
!!! TGTTTGCTAAACTTATTTAT+TGG - chr8_1:23905888-23905907 Msa1186010:intron 20.0%
!!! GTTTGCTAAACTTATTTATT+GGG - chr8_1:23905889-23905908 Msa1186010:intron 20.0%
!! TTTGCTAAACTTATTTATTG+GGG - chr8_1:23905890-23905909 Msa1186010:intron 20.0%
!! ATGTTTGTAATTCTTATATG+AGG - chr8_1:23905979-23905998 Msa1186010:intron 20.0%
!! AAAATGAACTCTATATTAGT+TGG - chr8_1:23906227-23906246 Msa1186010:intron 20.0%
!! TGTTTATAGATTTCATGAAA+TGG - chr8_1:23906279-23906298 Msa1186010:intron 20.0%
!! AAATCAATATACTGAAACAT+TGG + chr8_1:23906676-23906695 None:intergenic 20.0%
!!! TTAGTTTTTATAGAAAGGTT+TGG - chr8_1:23906710-23906729 Msa1186010:intron 20.0%
!!! CTATAACAAGTTCATAATTT+TGG - chr8_1:23906871-23906890 Msa1186010:intron 20.0%
!! GTTACATAGATAAATATTCA+AGG + chr8_1:23906905-23906924 None:intergenic 20.0%
!!! AGAAATGTTTGTTTTATACT+TGG - chr8_1:23907101-23907120 Msa1186010:intron 20.0%
!!! ATTTTAGAGAAGAAAATGAA+GGG + chr8_1:23907454-23907473 None:intergenic 20.0%
!!! ATTTTCTTCTCTAAAATGAA+TGG - chr8_1:23907457-23907476 Msa1186010:intron 20.0%
!! TAAATGTAAAAACTGAAAAC+TGG + chr8_1:23908039-23908058 None:intergenic 20.0%
!! CTTAATCACTAATTTAAAGA+TGG + chr8_1:23908376-23908395 None:intergenic 20.0%
!!! AGAAAAATTATTTGTTGGAT+TGG + chr8_1:23908425-23908444 None:intergenic 20.0%
!!! CAAATAATTTTTCTAATTGC+AGG - chr8_1:23908431-23908450 Msa1186010:intron 20.0%
!! ATACATAATAATGTCAAAGT+TGG - chr8_1:23909129-23909148 Msa1186010:intron 20.0%
!! AAATACTAAACTTGGAAATT+AGG - chr8_1:23909613-23909632 Msa1186010:intron 20.0%
!! AATACTAAACTTGGAAATTA+GGG - chr8_1:23909614-23909633 Msa1186010:intron 20.0%
!!! TATTATTTAGCTTATGCTTT+GGG + chr8_1:23909805-23909824 None:intergenic 20.0%
!!! ATATTATTTAGCTTATGCTT+TGG + chr8_1:23909806-23909825 None:intergenic 20.0%
!! AATAGTAAATATTTCCTTAC+AGG - chr8_1:23909873-23909892 Msa1186010:intron 20.0%
!! ATCATATATAAAAGAGTGAA+AGG + chr8_1:23909905-23909924 None:intergenic 20.0%
!! ATCTTAAAATACAATTAGAC+AGG + chr8_1:23910077-23910096 None:intergenic 20.0%
!!! TGTCTAATTGTATTTTAAGA+TGG - chr8_1:23910076-23910095 Msa1186010:intron 20.0%
!! TTGAATTGTTCAAAATAAGA+TGG - chr8_1:23911005-23911024 Msa1186010:intron 20.0%
!!! TTTTTTTGTCATTTTGTACT+TGG - chr8_1:23911463-23911482 Msa1186010:intron 20.0%
!!! CATTTTTTCTTCTGTTTTAA+AGG - chr8_1:23911514-23911533 Msa1186010:intron 20.0%
!! TCAAATACAAAAGAAGATAT+AGG + chr8_1:23912235-23912254 None:intergenic 20.0%
!! TGTCTAAAGATTAAGATTAA+AGG - chr8_1:23912291-23912310 Msa1186010:intron 20.0%
!! TAATATCACAATGATAGATT+TGG + chr8_1:23912535-23912554 None:intergenic 20.0%
!! AATAAAGCCAACATTAAAAT+TGG - chr8_1:23912645-23912664 Msa1186010:intron 20.0%
!!! TTAGTTTCCAATTTTAATGT+TGG + chr8_1:23912655-23912674 None:intergenic 20.0%
!! AAAATTGGAAACTAATAATG+AGG - chr8_1:23912660-23912679 Msa1186010:CDS 20.0%
!! AATTTATATGATCTAGATCA+AGG - chr8_1:23913556-23913575 Msa1186010:CDS 20.0%
!! TTTAATATTGTTGAGAATCA+CGG - chr8_1:23913607-23913626 Msa1186010:intron 20.0%
!!! ATCCAAACTTTTTAAATGAT+GGG + chr8_1:23913790-23913809 None:intergenic 20.0%
!!! AATCCAAACTTTTTAAATGA+TGG + chr8_1:23913791-23913810 None:intergenic 20.0%
!!! ATTTCATACTATGCATTTTT+GGG + chr8_1:23914017-23914036 None:intergenic 20.0%
!!! TATTTCATACTATGCATTTT+TGG + chr8_1:23914018-23914037 None:intergenic 20.0%
!!! ATTAGTTTGTAAGCATAATA+TGG - chr8_1:23914261-23914280 Msa1186010:intron 20.0%
!! CTAATAATGAAAAAGGAAAA+CGG - chr8_1:23914349-23914368 Msa1186010:intron 20.0%
!!! TTTTTTTGCTTATGGTTTAA+GGG + chr8_1:23914465-23914484 None:intergenic 20.0%
!!! TAAAGACAATACTTTTCTTT+TGG + chr8_1:23914991-23915010 None:intergenic 20.0%
!!! TAAATTCCTTTTGAAATGTA+GGG + chr8_1:23915509-23915528 None:intergenic 20.0%
!!! ATAAATTCCTTTTGAAATGT+AGG + chr8_1:23915510-23915529 None:intergenic 20.0%
!! ATAGTTACAATATAAAAGTC+AGG + chr8_1:23915749-23915768 None:intergenic 20.0%
!!! ACTTTTATATTGTAACTATG+TGG - chr8_1:23915750-23915769 Msa1186010:intron 20.0%
!! ATAAAATGTCCATATAATTC+GGG - chr8_1:23915959-23915978 Msa1186010:intron 20.0%
!! ATTAACATCTACCTAAAATA+TGG - chr8_1:23916333-23916352 Msa1186010:intron 20.0%
!! ACCTAAAATATGGATTTAAA+CGG - chr8_1:23916343-23916362 Msa1186010:intron 20.0%
!!! TTCTTTACATGTTTTTCATA+TGG + chr8_1:23916931-23916950 None:intergenic 20.0%
!! TAATCTTATCCATTAAGTAA+AGG + chr8_1:23917242-23917261 None:intergenic 20.0%
!!! TTCAAAAGCTGTTGATTTAT+TGG - chr8_1:23905065-23905084 Msa1186010:intron 25.0%
!!! TTTTGTTTTGAGTATGTTGT+TGG - chr8_1:23905234-23905253 Msa1186010:intron 25.0%
!!! TTTGTTTTGAGTATGTTGTT+GGG - chr8_1:23905235-23905254 Msa1186010:intron 25.0%
! TAAGTAATTAAGTGTGTGTT+TGG - chr8_1:23905331-23905350 Msa1186010:intron 25.0%
!!! TAAGTTAGAATCAGTTTTAG+AGG - chr8_1:23905671-23905690 Msa1186010:intron 25.0%
!!! GAAACTGATTTTTATAAGCT+TGG + chr8_1:23905723-23905742 None:intergenic 25.0%
!!! CAAGTTTTTAGAATCATGTT+TGG - chr8_1:23905742-23905761 Msa1186010:intron 25.0%
! AAATCAATTATGTGCATGTT+TGG + chr8_1:23905784-23905803 None:intergenic 25.0%
!! ATTTTTGCTTTAGCAAAGAA+AGG + chr8_1:23906022-23906041 None:intergenic 25.0%
! AATTGAAGAAGCTGAAATAT+TGG - chr8_1:23906039-23906058 Msa1186010:intron 25.0%
! TTCATGAAATCTATAAACAC+TGG + chr8_1:23906278-23906297 None:intergenic 25.0%
!! TTTTACAGTATCTGTATATG+AGG + chr8_1:23906350-23906369 None:intergenic 25.0%
! ATAGATAAATATTCAAGGAC+TGG + chr8_1:23906900-23906919 None:intergenic 25.0%
! ATTAATTGCAGAATGATTCA+TGG - chr8_1:23906926-23906945 Msa1186010:intron 25.0%
! CTTAAACAAGAAGAATACTT+TGG - chr8_1:23907007-23907026 Msa1186010:intron 25.0%
!!! CATTTTAGAGAAGAAAATGA+AGG + chr8_1:23907455-23907474 None:intergenic 25.0%
! ATCAACTGAATAGAACATAA+GGG - chr8_1:23907755-23907774 Msa1186010:intron 25.0%
! TAAAAAGATTCATCAAGTTC+AGG - chr8_1:23907779-23907798 Msa1186010:intron 25.0%
! TAAGATCATATAATGGCTAA+AGG + chr8_1:23907810-23907829 None:intergenic 25.0%
! ATTGCAATTAAGTCACTAAT+TGG + chr8_1:23907876-23907895 None:intergenic 25.0%
!! ATTCTTGAACTAGTTTGAAT+CGG - chr8_1:23907991-23908010 Msa1186010:intron 25.0%
!!! CAATGTTTTAAAAACCTGAT+CGG + chr8_1:23908142-23908161 None:intergenic 25.0%
!!! GCTATTAAAGTTTTTGAAGA+CGG - chr8_1:23908258-23908277 Msa1186010:intron 25.0%
! ATTACTCTGTATGTGATATA+CGG + chr8_1:23908491-23908510 None:intergenic 25.0%
!!! GTTTATTTTTGAAACTCTTC+AGG - chr8_1:23908816-23908835 Msa1186010:intron 25.0%
! TCAATCAACATATCATATCA+AGG + chr8_1:23909004-23909023 None:intergenic 25.0%
!! TCGTTCTTATATGCAATTTT+TGG - chr8_1:23909397-23909416 Msa1186010:intron 25.0%
! TACATTATTGAATTCTTTCC+AGG - chr8_1:23909450-23909469 Msa1186010:intron 25.0%
! ATGAGATTTAACATGAAAAC+CGG - chr8_1:23909479-23909498 Msa1186010:intron 25.0%
! GTTTAATTAGCAATACCATT+CGG + chr8_1:23909747-23909766 None:intergenic 25.0%
!! CACTCTTTTATATATGATGT+TGG - chr8_1:23909907-23909926 Msa1186010:intron 25.0%
! TAAGCACGTTAGAAAAAATA+AGG + chr8_1:23910016-23910035 None:intergenic 25.0%
!!! TTATTTTTTCTAACGTGCTT+AGG - chr8_1:23910015-23910034 Msa1186010:intron 25.0%
!!! ATCGACTTGTATAAAATCAA+AGG - chr8_1:23910445-23910464 Msa1186010:intron 25.0%
!!! CAGTTAATTATTTGTTGTCT+TGG + chr8_1:23910527-23910546 None:intergenic 25.0%
! ATCACTGTTTATGAGTATTA+TGG - chr8_1:23910683-23910702 Msa1186010:intron 25.0%
! ATTCTCGATGTTAATCATTA+TGG - chr8_1:23910725-23910744 Msa1186010:intron 25.0%
! TCAGTCTAAATGATAATTCA+CGG + chr8_1:23910954-23910973 None:intergenic 25.0%
! ATCATTTAGACTGATGAAAA+TGG - chr8_1:23910960-23910979 Msa1186010:intron 25.0%
! TCTTAACTCTCAATTATAGA+TGG - chr8_1:23911086-23911105 Msa1186010:intron 25.0%
!!! CTCAATTATAGATGGATTAA+AGG - chr8_1:23911094-23911113 Msa1186010:intron 25.0%
! AGAAAAATAGTAAATGGGTA+TGG - chr8_1:23911159-23911178 Msa1186010:CDS 25.0%
! TTTGAAAAATTAGTTGCACA+AGG + chr8_1:23911333-23911352 None:intergenic 25.0%
! AGAAAAAAATGTGTATACGT+AGG + chr8_1:23911590-23911609 None:intergenic 25.0%
!!! CGTATACACATTTTTTTCTT+CGG - chr8_1:23911591-23911610 Msa1186010:intron 25.0%
! CAGTATATTGTATGTAAACT+AGG - chr8_1:23911618-23911637 Msa1186010:intron 25.0%
! AATACAAAAGAAGATATAGG+AGG + chr8_1:23912232-23912251 None:intergenic 25.0%
!!! ATCTTTAGACAGTATTTTGA+AGG + chr8_1:23912282-23912301 None:intergenic 25.0%
!! TACGATTATATTTAGTCTTC+AGG - chr8_1:23912378-23912397 Msa1186010:intron 25.0%
! GTCAAATTAAGTGATATACA+CGG + chr8_1:23912418-23912437 None:intergenic 25.0%
! TTAACAAGAAGATCCTTAAT+AGG + chr8_1:23913068-23913087 None:intergenic 25.0%
! ATTAAGGATCTTCTTGTTAA+AGG - chr8_1:23913068-23913087 Msa1186010:CDS 25.0%
! ATAATTTAGATGGTTAACGT+TGG + chr8_1:23913404-23913423 None:intergenic 25.0%
!!! TTTTCTTTCATCGGTTTTAA+AGG + chr8_1:23913729-23913748 None:intergenic 25.0%
! TACCCATCATTTAAAAAGTT+TGG - chr8_1:23913785-23913804 Msa1186010:intron 25.0%
!!! AAAGTTTGGATTTTTTGACA+TGG - chr8_1:23913799-23913818 Msa1186010:intron 25.0%
! TTATATATCCTTCCAAAAAC+CGG + chr8_1:23913882-23913901 None:intergenic 25.0%
! TTTGGAAGGATATATAACAT+TGG - chr8_1:23913885-23913904 Msa1186010:intron 25.0%
!!! GGATATATAACATTGGTTTT+TGG - chr8_1:23913892-23913911 Msa1186010:intron 25.0%
!!! TTTTTTGCTTATGGTTTAAG+GGG + chr8_1:23914464-23914483 None:intergenic 25.0%
!!! GTTTTTTTGCTTATGGTTTA+AGG + chr8_1:23914466-23914485 None:intergenic 25.0%
!!! TTGTGTAGTTTTTTTGCTTA+TGG + chr8_1:23914473-23914492 None:intergenic 25.0%
! AGTAAATGTTCTAGCATAAA+AGG - chr8_1:23914548-23914567 Msa1186010:intron 25.0%
! AGAACAAACCAGAAATTTAA+AGG - chr8_1:23914581-23914600 Msa1186010:intron 25.0%
! GAACAAACCAGAAATTTAAA+GGG - chr8_1:23914582-23914601 Msa1186010:intron 25.0%
! TAAACCTAAACAACAGTTAT+TGG + chr8_1:23914753-23914772 None:intergenic 25.0%
!! TAACTGTTGTTTAGGTTTAA+AGG - chr8_1:23914754-23914773 Msa1186010:intron 25.0%
!! AACTGTTGTTTAGGTTTAAA+GGG - chr8_1:23914755-23914774 Msa1186010:intron 25.0%
!! TTTAGGTTTAAAGGGTAAAA+TGG - chr8_1:23914763-23914782 Msa1186010:intron 25.0%
! TATTGAACCAAAAAAAAGAG+AGG - chr8_1:23914906-23914925 Msa1186010:intron 25.0%
! ATTGAACCAAAAAAAAGAGA+GGG - chr8_1:23914907-23914926 Msa1186010:intron 25.0%
!! ATTTTACCCTCTCTTTTTTT+TGG + chr8_1:23914916-23914935 None:intergenic 25.0%
! AAAAAAAAGAGAGGGTAAAA+TGG - chr8_1:23914915-23914934 Msa1186010:intron 25.0%
! AAAAAAAGAGAGGGTAAAAT+GGG - chr8_1:23914916-23914935 Msa1186010:intron 25.0%
! GGTAAAATTAGAAAGAAAGT+AGG - chr8_1:23914960-23914979 Msa1186010:intron 25.0%
!!! TCAAAGAGTGCTTATAATAA+GGG - chr8_1:23915831-23915850 Msa1186010:intron 25.0%
! TTTATAACTCCCGAATTATA+TGG + chr8_1:23915971-23915990 None:intergenic 25.0%
! CCTAAAATATGGATTTAAAC+GGG - chr8_1:23916344-23916363 Msa1186010:intron 25.0%
! CTAAAATATGGATTTAAACG+GGG - chr8_1:23916345-23916364 Msa1186010:intron 25.0%
! TTTCCATGAGTAGTTTATTT+AGG - chr8_1:23916807-23916826 Msa1186010:intron 25.0%
!! TTTCTTAGGTGTTTTTCATA+TGG + chr8_1:23916834-23916853 None:intergenic 25.0%
!! AAACTTAGGTTCATTTTCTT+AGG + chr8_1:23916848-23916867 None:intergenic 25.0%
! TCACTTTGCAAATAACAAAT+TGG + chr8_1:23917009-23917028 None:intergenic 25.0%
!!! TTTGTTATTTGCAAAGTGAA+CGG - chr8_1:23917010-23917029 Msa1186010:CDS 25.0%
! GTAAGAGATAAAAACGATAT+AGG + chr8_1:23917066-23917085 None:intergenic 25.0%
!! ATTTTTCCTGACCAAAAAAA+AGG - chr8_1:23917154-23917173 Msa1186010:five_prime_UTR 25.0%
!! TTTTTCCTGACCAAAAAAAA+GGG - chr8_1:23917155-23917174 Msa1186010:five_prime_UTR 25.0%
!!! ACTCGTGTATTTTAGTTGAA+GGG + chr8_1:23904742-23904761 None:intergenic 30.0%
!!! AACTCGTGTATTTTAGTTGA+AGG + chr8_1:23904743-23904762 None:intergenic 30.0%
TTAGAATCTTCATACTTACG+TGG - chr8_1:23904857-23904876 Msa1186010:intron 30.0%
! GTAGAATGTTGTGTTTTGTA+TGG + chr8_1:23904920-23904939 None:intergenic 30.0%
CTAACACAAACTCAACAAAA+TGG - chr8_1:23904981-23905000 Msa1186010:intron 30.0%
AAAATGGAGTCTGAGAAAAT+TGG - chr8_1:23904997-23905016 Msa1186010:intron 30.0%
! TTTGAAGTGAAACCATTACT+GGG + chr8_1:23905051-23905070 None:intergenic 30.0%
!!! TTTTGAAGTGAAACCATTAC+TGG + chr8_1:23905052-23905071 None:intergenic 30.0%
TTAACAGGAAGATCCTTAAT+AGG + chr8_1:23905180-23905199 None:intergenic 30.0%
ATTAAGGATCTTCCTGTTAA+AGG - chr8_1:23905180-23905199 Msa1186010:intron 30.0%
AACCAATTACTATCACTAAC+CGG + chr8_1:23905213-23905232 None:intergenic 30.0%
!!! TTGTTTTGAGTATGTTGTTG+GGG - chr8_1:23905236-23905255 Msa1186010:intron 30.0%
! TTTTTGTCATGAGTTTGAAG+TGG - chr8_1:23905272-23905291 Msa1186010:intron 30.0%
TAACTCATTATATCTTCGCA+GGG + chr8_1:23905453-23905472 None:intergenic 30.0%
TGCGAAGATATAATGAGTTA+GGG - chr8_1:23905453-23905472 Msa1186010:intron 30.0%
AAAATTGTGAGGGATTGAAT+TGG - chr8_1:23905523-23905542 Msa1186010:intron 30.0%
AAATTGTGAGGGATTGAATT+GGG - chr8_1:23905524-23905543 Msa1186010:intron 30.0%
!! ACTGATTTTTATAAGCTTGG+AGG + chr8_1:23905720-23905739 None:intergenic 30.0%
! TGCATGTTTGGATTCATTTT+GGG + chr8_1:23905772-23905791 None:intergenic 30.0%
!!! CTTGACTAGATTCTAGTTTT+CGG + chr8_1:23906203-23906222 None:intergenic 30.0%
!! AACTTGCTAAAAGATATGCA+TGG + chr8_1:23906378-23906397 None:intergenic 30.0%
TACCATATCATGTGTATTGT+AGG - chr8_1:23906524-23906543 Msa1186010:intron 30.0%
ATCCTACAATACACATGATA+TGG + chr8_1:23906529-23906548 None:intergenic 30.0%
AAACAAGAAGAATACTTTGG+AGG - chr8_1:23907010-23907029 Msa1186010:intron 30.0%
! CTTGTATACCATTTTCAGAT+TGG - chr8_1:23907140-23907159 Msa1186010:intron 30.0%
TCATATCTCCAATCTGAAAA+TGG + chr8_1:23907151-23907170 None:intergenic 30.0%
TTTCAGATTGGAGATATGAA+AGG - chr8_1:23907152-23907171 Msa1186010:intron 30.0%
! TTTTGTCAAATTCAAGCTCA+TGG - chr8_1:23907275-23907294 Msa1186010:intron 30.0%
TTTGTCAAATTCAAGCTCAT+GGG - chr8_1:23907276-23907295 Msa1186010:intron 30.0%
GGGCTAATTTAAAAATTGAG+AGG + chr8_1:23907434-23907453 None:intergenic 30.0%
AACATTATCATTAACCAGCA+AGG + chr8_1:23907508-23907527 None:intergenic 30.0%
CTTATGTTCTATTCAGTTGA+TGG + chr8_1:23907756-23907775 None:intergenic 30.0%
CATCAACTGAATAGAACATA+AGG - chr8_1:23907754-23907773 Msa1186010:intron 30.0%
! TGCTGCTTAAGATCATATAA+TGG + chr8_1:23907817-23907836 None:intergenic 30.0%
!!! GCATTTTTTTTTCCATCTCA+TGG - chr8_1:23907834-23907853 Msa1186010:intron 30.0%
CTTCAGTATCATAAAAGAAG+AGG + chr8_1:23908213-23908232 None:intergenic 30.0%
! CTTCTTTTATGATACTGAAG+TGG - chr8_1:23908213-23908232 Msa1186010:intron 30.0%
CTAGATTATGACAAGAGATT+GGG - chr8_1:23908303-23908322 Msa1186010:intron 30.0%
CACATACAGAGTAATTTCAA+AGG - chr8_1:23908496-23908515 Msa1186010:intron 30.0%
TACAGAGTAATTTCAAAGGA+CGG - chr8_1:23908500-23908519 Msa1186010:intron 30.0%
!!! TTTTGAAACTCTTCAGGAAA+TGG - chr8_1:23908822-23908841 Msa1186010:intron 30.0%
! AGGATGAAAAGCATATTAGA+TGG - chr8_1:23908920-23908939 Msa1186010:intron 30.0%
CTCTACTCAAAAAAATTCTC+TGG + chr8_1:23909076-23909095 None:intergenic 30.0%
!!! GAGAATTTTTTTGAGTAGAG+AGG - chr8_1:23909076-23909095 Msa1186010:intron 30.0%
TTAAAGCACAAATTGAAGCT+TGG + chr8_1:23909187-23909206 None:intergenic 30.0%
!!! ATTTTTGGAGCAAATTTCAC+TGG - chr8_1:23909412-23909431 Msa1186010:intron 30.0%
GTTAAATCTCATTTCATACC+TGG + chr8_1:23909471-23909490 None:intergenic 30.0%
TCTCCTCATGTTGAAAATTA+GGG - chr8_1:23909584-23909603 Msa1186010:intron 30.0%
!!! TGGTTTTGCTCTAAAGATTT+TGG + chr8_1:23909704-23909723 None:intergenic 30.0%
TATAAAAGAGTGAAAGGACA+TGG + chr8_1:23909899-23909918 None:intergenic 30.0%
! ATTAGACAGGAAAGTACATA+TGG + chr8_1:23910064-23910083 None:intergenic 30.0%
AGGAAACAACGATATGTATA+TGG - chr8_1:23910168-23910187 Msa1186010:intron 30.0%
GGAAACAACGATATGTATAT+GGG - chr8_1:23910169-23910188 Msa1186010:intron 30.0%
TTTAGCAATGCTGTCTAATT+CGG + chr8_1:23910196-23910215 None:intergenic 30.0%
CATCATGTACAAAAAAGATC+AGG + chr8_1:23910392-23910411 None:intergenic 30.0%
TTTGTACATGATGAGAATAC+CGG - chr8_1:23910399-23910418 Msa1186010:intron 30.0%
TAAAACCGTAAAATATGACG+TGG - chr8_1:23910556-23910575 Msa1186010:intron 30.0%
! ATTTGCCACGTCATATTTTA+CGG + chr8_1:23910564-23910583 None:intergenic 30.0%
GAATTGACCATGATTTACAT+GGG + chr8_1:23910709-23910728 None:intergenic 30.0%
AGAATTGACCATGATTTACA+TGG + chr8_1:23910710-23910729 None:intergenic 30.0%
AAATAGAGAGGAGAAATGTA+AGG + chr8_1:23910920-23910939 None:intergenic 30.0%
GTAATATGAAGGAAATAGAG+AGG + chr8_1:23910932-23910951 None:intergenic 30.0%
GATAATTCACGGTAATATGA+AGG + chr8_1:23910943-23910962 None:intergenic 30.0%
TTTAGACTGATGAAAATGGA+TGG - chr8_1:23910964-23910983 Msa1186010:intron 30.0%
TTTATACCATTACCACTTTC+TGG - chr8_1:23911226-23911245 Msa1186010:CDS 30.0%
TTTAAACCAGAAAGTGGTAA+TGG + chr8_1:23911235-23911254 None:intergenic 30.0%
TTGTATGTAAACTAGGTCTA+CGG - chr8_1:23911625-23911644 Msa1186010:intron 30.0%
AATTGAGTTTACAGTAGTGT+AGG + chr8_1:23911684-23911703 None:intergenic 30.0%
AACAGAATTTACAACAGTCA+AGG + chr8_1:23911810-23911829 None:intergenic 30.0%
TTGACTGTTGTAAATTCTGT+TGG - chr8_1:23911809-23911828 Msa1186010:CDS 30.0%
TAGTCACATCCAATAAAACT+GGG + chr8_1:23911974-23911993 None:intergenic 30.0%
ATGCTATACGATTTGTAGAA+AGG + chr8_1:23912124-23912143 None:intergenic 30.0%
! TATATTTAGTCTTCAGGTTC+AGG - chr8_1:23912384-23912403 Msa1186010:intron 30.0%
! GATTTGGTTTCTTTAGATCT+GGG + chr8_1:23912519-23912538 None:intergenic 30.0%
! AGATTTGGTTTCTTTAGATC+TGG + chr8_1:23912520-23912539 None:intergenic 30.0%
CGAATAAGAACTCAAAAAGT+TGG - chr8_1:23912600-23912619 Msa1186010:intron 30.0%
TAGTAGTAGGTTAAACTCAT+TGG - chr8_1:23912791-23912810 Msa1186010:intron 30.0%
AGTAGTAGGTTAAACTCATT+GGG - chr8_1:23912792-23912811 Msa1186010:intron 30.0%
TGATTTGACCTTTACACAAA+TGG + chr8_1:23912877-23912896 None:intergenic 30.0%
! GTCAAATCATTTTCATTGAG+AGG - chr8_1:23912888-23912907 Msa1186010:intron 30.0%
! AAATCATTTTCATTGAGAGG+AGG - chr8_1:23912891-23912910 Msa1186010:intron 30.0%
! AATCATTTTCATTGAGAGGA+GGG - chr8_1:23912892-23912911 Msa1186010:intron 30.0%
! TTTGAACTGAAACCTTTTCT+TGG + chr8_1:23912939-23912958 None:intergenic 30.0%
AAAAACAATCACTAACTGGA+AGG + chr8_1:23913097-23913116 None:intergenic 30.0%
GAAGAAAAACAATCACTAAC+TGG + chr8_1:23913101-23913120 None:intergenic 30.0%
!!! TTTTTTGTCGAATAACCTAG+TGG - chr8_1:23913126-23913145 Msa1186010:CDS 30.0%
! TGGCTAGAATTTACCTTTTA+AGG - chr8_1:23913146-23913165 Msa1186010:CDS 30.0%
!!! TACCTTTTAAGGTGAATAAG+CGG - chr8_1:23913157-23913176 Msa1186010:CDS 30.0%
TTGAGCATATATGTTTCATC+TGG - chr8_1:23913468-23913487 Msa1186010:CDS 30.0%
! TGATTTAAGATACTGTTAGC+CGG - chr8_1:23913860-23913879 Msa1186010:intron 30.0%
TGCTTACAAACTAATGCAAT+TGG + chr8_1:23914256-23914275 None:intergenic 30.0%
AGCATAATATGGAAGAAAAG+TGG - chr8_1:23914272-23914291 Msa1186010:intron 30.0%
ACTCTTTCCCTTTAAATTTC+TGG + chr8_1:23914592-23914611 None:intergenic 30.0%
! AACTGTAAGCATTTTTGTGT+GGG + chr8_1:23914705-23914724 None:intergenic 30.0%
! TAACTGTAAGCATTTTTGTG+TGG + chr8_1:23914706-23914725 None:intergenic 30.0%
! AGTTCCAATAACTGTTGTTT+AGG - chr8_1:23914746-23914765 Msa1186010:intron 30.0%
!! TGTTTAAAGTGTTGAGAAGT+GGG + chr8_1:23914863-23914882 None:intergenic 30.0%
!! TTGTTTAAAGTGTTGAGAAG+TGG + chr8_1:23914864-23914883 None:intergenic 30.0%
TACACTACAAATTGATGTGA+GGG - chr8_1:23915037-23915056 Msa1186010:CDS 30.0%
! AAAATATGAGTTGTTTCGAG+AGG - chr8_1:23915470-23915489 Msa1186010:CDS 30.0%
CTTATTATAAGCACTCTTTG+AGG + chr8_1:23915832-23915851 None:intergenic 30.0%
!! CTCAAAGAGTGCTTATAATA+AGG - chr8_1:23915830-23915849 Msa1186010:intron 30.0%
TGCTTATAATAAGGGATGAA+GGG - chr8_1:23915839-23915858 Msa1186010:intron 30.0%
! CCCGTTTAAATCCATATTTT+AGG + chr8_1:23916347-23916366 None:intergenic 30.0%
TGAAAATAATGAGCACATGT+AGG - chr8_1:23916524-23916543 Msa1186010:intron 30.0%
!!! TATAACCCTTTTTTTTGGTC+AGG + chr8_1:23917163-23917182 None:intergenic 30.0%
TAGGACAAATGTCATTATCT+TGG - chr8_1:23917276-23917295 Msa1186010:five_prime_UTR 30.0%
! AATGACAAGAAAGCACAAAG+AGG - chr8_1:23904815-23904834 Msa1186010:intron 35.0%
! GTATGGTTTAACTTCCATAG+TGG + chr8_1:23904903-23904922 None:intergenic 35.0%
ATTCATCACTTCCTCATCAT+TGG - chr8_1:23905115-23905134 Msa1186010:intron 35.0%
! TGGTAATTTTGCACCTGTTA+AGG - chr8_1:23905143-23905162 Msa1186010:intron 35.0%
TTCCGGTTAGTGATAGTAAT+TGG - chr8_1:23905208-23905227 Msa1186010:intron 35.0%
!! TGTTTTGAGTATGTTGTTGG+GGG - chr8_1:23905237-23905256 Msa1186010:intron 35.0%
CTAACTCATTATATCTTCGC+AGG + chr8_1:23905454-23905473 None:intergenic 35.0%
CTGCGAAGATATAATGAGTT+AGG - chr8_1:23905452-23905471 Msa1186010:intron 35.0%
TTGTTGAGTATGAAGATGTC+AGG - chr8_1:23905483-23905502 Msa1186010:intron 35.0%
TGTTGAGTATGAAGATGTCA+GGG - chr8_1:23905484-23905503 Msa1186010:intron 35.0%
! GTGCATGTTTGGATTCATTT+TGG + chr8_1:23905773-23905792 None:intergenic 35.0%
! ATCTATAAACACTGGCTGAA+GGG + chr8_1:23906270-23906289 None:intergenic 35.0%
! AATCTATAAACACTGGCTGA+AGG + chr8_1:23906271-23906290 None:intergenic 35.0%
TGTATATGAGGAAAGTCTAC+TGG + chr8_1:23906338-23906357 None:intergenic 35.0%
TCCTAAAGCAATTCTATTCG+AGG - chr8_1:23906440-23906459 Msa1186010:intron 35.0%
TCCTCGAATAGAATTGCTTT+AGG + chr8_1:23906444-23906463 None:intergenic 35.0%
AAGACCTGATATTGCTCAAA+AGG + chr8_1:23906491-23906510 None:intergenic 35.0%
GTATTGTAGGATTGCTTGAA+TGG - chr8_1:23906537-23906556 Msa1186010:intron 35.0%
!! CTTGAATGGAGAGTTTGTTA+GGG - chr8_1:23906551-23906570 Msa1186010:intron 35.0%
TATACTGAAACATTGGTGCA+AGG + chr8_1:23906669-23906688 None:intergenic 35.0%
! AGAAAGGTTTGGTATAGATG+TGG - chr8_1:23906721-23906740 Msa1186010:intron 35.0%
!! AGCGAAGTTTTATGCTCATA+CGG - chr8_1:23906783-23906802 Msa1186010:intron 35.0%
CAAACCTGCAAAAACATAGA+GGG + chr8_1:23906815-23906834 None:intergenic 35.0%
TCAAACCTGCAAAAACATAG+AGG + chr8_1:23906816-23906835 None:intergenic 35.0%
!! CTATGTTTTTGCAGGTTTGA+CGG - chr8_1:23906816-23906835 Msa1186010:intron 35.0%
! ACGAGAAGTTTTCACAAAAC+GGG + chr8_1:23906987-23907006 None:intergenic 35.0%
! GACGAGAAGTTTTCACAAAA+CGG + chr8_1:23906988-23907007 None:intergenic 35.0%
!! TGGAGGCTCTAAATTTATGA+AGG - chr8_1:23907027-23907046 Msa1186010:intron 35.0%
GGAGATATGAAAGGTCTATT+TGG - chr8_1:23907161-23907180 Msa1186010:intron 35.0%
AGGTCTATTTGGACTGTTAA+TGG - chr8_1:23907172-23907191 Msa1186010:intron 35.0%
!! AAAGTAGTGGACGTTTCTTA+TGG - chr8_1:23907224-23907243 Msa1186010:intron 35.0%
CACGTGTGTAATCTTCAAAT+TGG + chr8_1:23907379-23907398 None:intergenic 35.0%
CAATTTGAAGATTACACACG+TGG - chr8_1:23907377-23907396 Msa1186010:intron 35.0%
TATACAAGAGCTGTATTAGC+TGG + chr8_1:23907623-23907642 None:intergenic 35.0%
!! AGAAAGGAAAAGTACTCACA+AGG + chr8_1:23907686-23907705 None:intergenic 35.0%
! AAGTTGATTTCTCCATGAGA+TGG + chr8_1:23907849-23907868 None:intergenic 35.0%
TTTGAAAACCAGACTGAATC+AGG - chr8_1:23907898-23907917 Msa1186010:intron 35.0%
TTTGAATCGGAGTTGAATCA+CGG - chr8_1:23908004-23908023 Msa1186010:intron 35.0%
CATGGTTCGATTGATTATGT+TGG + chr8_1:23908093-23908112 None:intergenic 35.0%
CAACATAATCAATCGAACCA+TGG - chr8_1:23908091-23908110 Msa1186010:intron 35.0%
GCTAGATTATGACAAGAGAT+TGG - chr8_1:23908302-23908321 Msa1186010:intron 35.0%
! CCAGTAAATGGATCAACTTT+TGG + chr8_1:23908348-23908367 None:intergenic 35.0%
! CCAAAAGTTGATCCATTTAC+TGG - chr8_1:23908345-23908364 Msa1186010:intron 35.0%
!! ATTGGCTCTGATATTGTTAC+GGG + chr8_1:23908545-23908564 None:intergenic 35.0%
!! GATTGGCTCTGATATTGTTA+CGG + chr8_1:23908546-23908565 None:intergenic 35.0%
TTGTGGAATATGAAGCAGTT+TGG + chr8_1:23908955-23908974 None:intergenic 35.0%
AACTGCTTCATATTCCACAA+TGG - chr8_1:23908955-23908974 Msa1186010:intron 35.0%
AGCAAACAAACATACCATTG+TGG + chr8_1:23908972-23908991 None:intergenic 35.0%
AATCCAAATTTGGACATGGT+TGG - chr8_1:23909322-23909341 Msa1186010:intron 35.0%
CTCTCCTCATGTTGAAAATT+AGG - chr8_1:23909583-23909602 Msa1186010:intron 35.0%
! CTACCCTAATTTTCAACATG+AGG + chr8_1:23909590-23909609 None:intergenic 35.0%
CTCATGTTGAAAATTAGGGT+AGG - chr8_1:23909588-23909607 Msa1186010:intron 35.0%
GGTAGGACAAATACTAAACT+TGG - chr8_1:23909605-23909624 Msa1186010:intron 35.0%
! TGAGCATGTTCTAAGTATGA+TGG - chr8_1:23909638-23909657 Msa1186010:intron 35.0%
CAACATTTACACTCAAGTGT+GGG + chr8_1:23909675-23909694 None:intergenic 35.0%
TCAACATTTACACTCAAGTG+TGG + chr8_1:23909676-23909695 None:intergenic 35.0%
ACAGCATTGCTAAAGTTACT+GGG - chr8_1:23910202-23910221 Msa1186010:intron 35.0%
TCCATCATCTTCTTCAGAAT+CGG + chr8_1:23910367-23910386 None:intergenic 35.0%
TTGTACATGATGAGAATACC+GGG - chr8_1:23910400-23910419 Msa1186010:intron 35.0%
GCAAATTGAAGAGTTGTGAT+TGG - chr8_1:23910578-23910597 Msa1186010:intron 35.0%
ATTATGGCCCATGTAAATCA+TGG - chr8_1:23910699-23910718 Msa1186010:intron 35.0%
CGATGTTAATCATTATGGCA+TGG - chr8_1:23910730-23910749 Msa1186010:intron 35.0%
CTGAGTATTATGAATGTTGC+AGG - chr8_1:23910753-23910772 Msa1186010:intron 35.0%
AAACCATATGGAACTCTTTG+AGG + chr8_1:23910845-23910864 None:intergenic 35.0%
! AAGAAAGCATGGAAACCATA+TGG + chr8_1:23910857-23910876 None:intergenic 35.0%
! GCAACTTTTAAACCAGAAAG+TGG + chr8_1:23911241-23911260 None:intergenic 35.0%
TAGAGTGAGAGATGAAAAAG+AGG + chr8_1:23911357-23911376 None:intergenic 35.0%
AAAATGTGACTCGAAGAGAA+TGG + chr8_1:23911500-23911519 None:intergenic 35.0%
! AGGTAAGTTGAACGTAAACT+TGG + chr8_1:23911664-23911683 None:intergenic 35.0%
GTGAATAACTCAACTTGCAT+GGG - chr8_1:23911716-23911735 Msa1186010:CDS 35.0%
CTGTTGTAAATTCTGTTGGT+TGG - chr8_1:23911813-23911832 Msa1186010:CDS 35.0%
!!! AGGGTATTTTAGTCATTCTG+AGG - chr8_1:23911943-23911962 Msa1186010:intron 35.0%
CTAGTCACATCCAATAAAAC+TGG + chr8_1:23911975-23911994 None:intergenic 35.0%
! TTTTGTATGACTCTCTTCAC+AGG - chr8_1:23912028-23912047 Msa1186010:intron 35.0%
CAAGCTAAACTGTAAACATG+TGG - chr8_1:23912065-23912084 Msa1186010:intron 35.0%
CAAATCGTATAGCATTTGTG+TGG - chr8_1:23912129-23912148 Msa1186010:intron 35.0%
! TTTTAGTCCACCTTTGCATA+TGG + chr8_1:23912468-23912487 None:intergenic 35.0%
!! AAAGGTGGACTAAAATTGAC+AGG - chr8_1:23912473-23912492 Msa1186010:CDS 35.0%
TAAAATTGACAGGTACATCG+TGG - chr8_1:23912483-23912502 Msa1186010:CDS 35.0%
AAAATTGACAGGTACATCGT+GGG - chr8_1:23912484-23912503 Msa1186010:CDS 35.0%
GCAGTAACATAAGTAGTAGT+AGG - chr8_1:23912778-23912797 Msa1186010:intron 35.0%
TCACAAGACCATTTGTGTAA+AGG - chr8_1:23912866-23912885 Msa1186010:intron 35.0%
! CTGAAACCTTTTCTTGGTTT+TGG + chr8_1:23912933-23912952 None:intergenic 35.0%
ATTCTTCACTTCCTCATCAT+TGG - chr8_1:23913003-23913022 Msa1186010:intron 35.0%
CTTAACAGGTGCAAAATTAC+CGG + chr8_1:23905145-23905164 None:intergenic 35.0%
ACAAGAAGATCCTTAATAGG+AGG + chr8_1:23913065-23913084 None:intergenic 35.0%
AAAGGTAAATTCTAGCCACT+AGG + chr8_1:23913144-23913163 None:intergenic 35.0%
AGCATATATGTTTCATCTGG+TGG - chr8_1:23913471-23913490 Msa1186010:CDS 35.0%
GCATATATGTTTCATCTGGT+GGG - chr8_1:23913472-23913491 Msa1186010:CDS 35.0%
ATGATCTAAGTTGCACATCA+AGG + chr8_1:23913694-23913713 None:intergenic 35.0%
!!! TCTTTCATCGGTTTTAAAGG+AGG + chr8_1:23913726-23913745 None:intergenic 35.0%
!! ACCATTTACTCACTTTTCGT+CGG - chr8_1:23913960-23913979 Msa1186010:intron 35.0%
GAGGTTGAAATTAGGATCTA+AGG + chr8_1:23914442-23914461 None:intergenic 35.0%
TTTAAGGGGAGGTTGAAATT+AGG + chr8_1:23914450-23914469 None:intergenic 35.0%
!! GTTTAAAGTGTTGAGAAGTG+GGG + chr8_1:23914862-23914881 None:intergenic 35.0%
GTACACTACAAATTGATGTG+AGG - chr8_1:23915036-23915055 Msa1186010:CDS 35.0%
CCTGGTTTCAGGATTATTAT+CGG + chr8_1:23915420-23915439 None:intergenic 35.0%
AAATGTAGGGTAGCTCTTAA+AGG + chr8_1:23915496-23915515 None:intergenic 35.0%
GTTTGACTCTATAGACAACT+AGG - chr8_1:23915614-23915633 Msa1186010:intron 35.0%
! ATAGACAACTAGGTTGAGTT+TGG - chr8_1:23915624-23915643 Msa1186010:intron 35.0%
! TAGACAACTAGGTTGAGTTT+GGG - chr8_1:23915625-23915644 Msa1186010:intron 35.0%
ACTATGTGGTTGTTATGAGT+TGG - chr8_1:23915764-23915783 Msa1186010:intron 35.0%
GTGCTTATAATAAGGGATGA+AGG - chr8_1:23915838-23915857 Msa1186010:intron 35.0%
! ACTCAGATTAGTCGTTCATT+GGG - chr8_1:23916396-23916415 Msa1186010:intron 35.0%
GGTCCTAAATAAACTACTCA+TGG + chr8_1:23916813-23916832 None:intergenic 35.0%
ATGAAGCAGCTTAATTCGTA+CGG - chr8_1:23917212-23917231 Msa1186010:five_prime_UTR 35.0%
TGCTTTCTTGTCATTGTCTG+AGG + chr8_1:23904810-23904829 None:intergenic 40.0%
ATGGAGTCTGAGAAAATTGG+AGG - chr8_1:23905000-23905019 Msa1186010:intron 40.0%
! GTGAAACCATTACTGGGTTT+TGG + chr8_1:23905045-23905064 None:intergenic 40.0%
GGATGAAACACCTCCTATTA+AGG - chr8_1:23905164-23905183 Msa1186010:intron 40.0%
ACAGGAAGATCCTTAATAGG+AGG + chr8_1:23905177-23905196 None:intergenic 40.0%
GAAGATGTCAGGGACTAATT+TGG - chr8_1:23905494-23905513 Msa1186010:intron 40.0%
TTTGGTTGCGGAAAATTGTG+AGG - chr8_1:23905512-23905531 Msa1186010:intron 40.0%
TTGGTTGCGGAAAATTGTGA+GGG - chr8_1:23905513-23905532 Msa1186010:intron 40.0%
! TCTATAAACACTGGCTGAAG+GGG + chr8_1:23906269-23906288 None:intergenic 40.0%
! GCTTGAATGGAGAGTTTGTT+AGG - chr8_1:23906550-23906569 Msa1186010:intron 40.0%
!! AATGGAGAGTTTGTTAGGGT+GGG - chr8_1:23906555-23906574 Msa1186010:intron 40.0%
! ACCAAATCCGAAGTTTTCTC+CGG - chr8_1:23906578-23906597 Msa1186010:intron 40.0%
!! CTTTCCCTCTATGTTTTTGC+AGG - chr8_1:23906808-23906827 Msa1186010:intron 40.0%
! CATGGTTTGCGTATCAAAGA+TGG - chr8_1:23906944-23906963 Msa1186010:intron 40.0%
GCGAGCTAAATTGAAAGTAG+TGG - chr8_1:23907211-23907230 Msa1186010:intron 40.0%
GTTTCTTATGGACATGGAAC+AGG - chr8_1:23907236-23907255 Msa1186010:intron 40.0%
! TGGATCAACTTTTGGATGAG+CGG + chr8_1:23908340-23908359 None:intergenic 40.0%
AAGATGGCTTCACCAGTAAA+TGG + chr8_1:23908360-23908379 None:intergenic 40.0%
GCAGGAGAGATGTTTACATT+TGG - chr8_1:23908449-23908468 Msa1186010:intron 40.0%
ACTCTGTATGTGATATACGG+TGG + chr8_1:23908488-23908507 None:intergenic 40.0%
TCTGATATTGTTACGGGAAC+AGG + chr8_1:23908539-23908558 None:intergenic 40.0%
GCAAAGTCATGCATCATGAT+TGG + chr8_1:23908563-23908582 None:intergenic 40.0%
AGAAACGCCTACAATACCTT+TGG + chr8_1:23908635-23908654 None:intergenic 40.0%
CAGAGTTTCAAAGTCAAGCT+TGG + chr8_1:23908710-23908729 None:intergenic 40.0%
!! TTGTTAGTCGTGTCACTTGA+TGG - chr8_1:23908749-23908768 Msa1186010:intron 40.0%
! TTTTCATCCTTAGCATAGCG+GGG + chr8_1:23908910-23908929 None:intergenic 40.0%
! CTTTTCATCCTTAGCATAGC+GGG + chr8_1:23908911-23908930 None:intergenic 40.0%
! GCTTTTCATCCTTAGCATAG+CGG + chr8_1:23908912-23908931 None:intergenic 40.0%
CTCTGGACTCTTCAATTTCA+CGG + chr8_1:23909059-23909078 None:intergenic 40.0%
TCTTTACCTTAGCCAATGCT+TGG - chr8_1:23909257-23909276 Msa1186010:intron 40.0%
CTTTACCTTAGCCAATGCTT+GGG - chr8_1:23909258-23909277 Msa1186010:intron 40.0%
TGTCCAAATTTGGATTCTCC+AGG + chr8_1:23909318-23909337 None:intergenic 40.0%
GGAGAATCCAAATTTGGACA+TGG - chr8_1:23909318-23909337 Msa1186010:intron 40.0%
!! CTTCTTTTGAGAAGCTTCAC+CGG + chr8_1:23909501-23909520 None:intergenic 40.0%
ATCTGCTGTAGATTTCCCTA+GGG - chr8_1:23909529-23909548 Msa1186010:intron 40.0%
TGTAGCTTTCATTCACCCTA+GGG + chr8_1:23909547-23909566 None:intergenic 40.0%
AACCGTGTCTAACTCTAAGT+AGG - chr8_1:23909764-23909783 Msa1186010:intron 40.0%
GTCCTACTTAGAGTTAGACA+CGG + chr8_1:23909769-23909788 None:intergenic 40.0%
GACAGCATTGCTAAAGTTAC+TGG - chr8_1:23910201-23910220 Msa1186010:intron 40.0%
!! ATTTGATTTGCACGCCAAAC+CGG - chr8_1:23910233-23910252 Msa1186010:intron 40.0%
!! AGCTTCGTTTTTCCAGAATC+CGG + chr8_1:23910255-23910274 None:intergenic 40.0%
GGAAAAACGAAGCTTGAAGT+TGG - chr8_1:23910261-23910280 Msa1186010:intron 40.0%
AAAACGAAGCTTGAAGTTGG+AGG - chr8_1:23910264-23910283 Msa1186010:intron 40.0%
! ACCGATTCTGAAGAAGATGA+TGG - chr8_1:23910363-23910382 Msa1186010:intron 40.0%
TTGCCTCAAAGAGTTCCATA+TGG - chr8_1:23910839-23910858 Msa1186010:intron 40.0%
TATGTAAACTAGGTCTACGG+TGG - chr8_1:23911628-23911647 Msa1186010:intron 40.0%
CGTGAATAACTCAACTTGCA+TGG - chr8_1:23911715-23911734 Msa1186010:CDS 40.0%
!! GTGTTGTTGTCTGTGTTTTG+CGG - chr8_1:23911766-23911785 Msa1186010:CDS 40.0%
!! GAGGTGTAACCCAGTTTTAT+TGG - chr8_1:23911962-23911981 Msa1186010:intron 40.0%
! TTTGTAGAAAGGCGTGTACT+AGG + chr8_1:23912113-23912132 None:intergenic 40.0%
ATGACCATGACCATATGCAA+AGG - chr8_1:23912455-23912474 Msa1186010:intron 40.0%
AAATTGACAGGTACATCGTG+GGG - chr8_1:23912485-23912504 Msa1186010:CDS 40.0%
AGTGCCAATGTTGAAGACTT+GGG + chr8_1:23912832-23912851 None:intergenic 40.0%
!! CACAAATGGTCTTGTGAGAA+TGG + chr8_1:23912863-23912882 None:intergenic 40.0%
! ATTGAGAGGAGGGATTTTGA+AGG - chr8_1:23912902-23912921 Msa1186010:intron 40.0%
GTGGAACCAAAACCAAGAAA+AGG - chr8_1:23912924-23912943 Msa1186010:intron 40.0%
! CGGTAATTTTGCACCTGTTA+AGG - chr8_1:23913031-23913050 Msa1186010:intron 40.0%
ATTGTAATGTGTTCGAACCC+AGG + chr8_1:23913188-23913207 None:intergenic 40.0%
!! AGATACTGTTAGCCGGTTTT+TGG - chr8_1:23913867-23913886 Msa1186010:intron 40.0%
TCCGACGAAAAGTGAGTAAA+TGG + chr8_1:23913964-23913983 None:intergenic 40.0%
CTGCTTGAATAGAGCAACAT+GGG + chr8_1:23914097-23914116 None:intergenic 40.0%
!!! TCGCACTCTCACTTTTTTAG+TGG + chr8_1:23914201-23914220 None:intergenic 40.0%
! ACTAAAAAAGTGAGAGTGCG+AGG - chr8_1:23914200-23914219 Msa1186010:intron 40.0%
TTTGCTTATGGTTTAAGGGG+AGG + chr8_1:23914461-23914480 None:intergenic 40.0%
! AAAAGTGTACCCAATTGCAG+CGG - chr8_1:23914643-23914662 Msa1186010:intron 40.0%
TATCCTTGGTCACAGAATGA+AGG + chr8_1:23914676-23914695 None:intergenic 40.0%
TACCAACTGAGCTACACTTA+CGG + chr8_1:23914792-23914811 None:intergenic 40.0%
AAGTGTGTGATCTTGCTACT+AGG - chr8_1:23914882-23914901 Msa1186010:intron 40.0%
!! ACTCTATTTCTGGTTCAGCA+GGG + chr8_1:23915096-23915115 None:intergenic 40.0%
CTGAACCAGAAATAGAGTCT+GGG - chr8_1:23915098-23915117 Msa1186010:intron 40.0%
TTCTTCCCAGACTCTATTTC+TGG + chr8_1:23915106-23915125 None:intergenic 40.0%
ATTGGACAGAAAACTGAGTC+TGG - chr8_1:23915386-23915405 Msa1186010:intron 40.0%
CCGATAATAATCCTGAAACC+AGG - chr8_1:23915417-23915436 Msa1186010:intron 40.0%
TAATCCTGAAACCAGGAGTA+AGG - chr8_1:23915424-23915443 Msa1186010:CDS 40.0%
ATTTCCTTACTCCTGGTTTC+AGG + chr8_1:23915431-23915450 None:intergenic 40.0%
AGACAGAATTTCCTTACTCC+TGG + chr8_1:23915438-23915457 None:intergenic 40.0%
GAGCTACCCTACATTTCAAA+AGG - chr8_1:23915500-23915519 Msa1186010:intron 40.0%
AAGGCGACGAGTGATATAAT+TGG + chr8_1:23915537-23915556 None:intergenic 40.0%
GGATAATATGTTGATCGCTG+CGG - chr8_1:23915583-23915602 Msa1186010:intron 40.0%
GAGTTAAATCTGCTAACCAG+CGG + chr8_1:23915708-23915727 None:intergenic 40.0%
!! GTGGTTGTTATGAGTTGGTT+TGG - chr8_1:23915769-23915788 Msa1186010:intron 40.0%
CAATGAACGACTAATCTGAG+TGG + chr8_1:23916397-23916416 None:intergenic 40.0%
! CACTCAGATTAGTCGTTCAT+TGG - chr8_1:23916395-23916414 Msa1186010:intron 40.0%
TACGGTGGACCTTTACTTAA+TGG - chr8_1:23917230-23917249 Msa1186010:five_prime_UTR 40.0%
! GACAAGAAAGCACAAAGAGG+AGG - chr8_1:23904818-23904837 Msa1186010:intron 45.0%
ATACTTACGTGGCAGTTGCT+AGG - chr8_1:23904868-23904887 Msa1186010:intron 45.0%
AACTTCCATAGTGGCATAGC+TGG + chr8_1:23904894-23904913 None:intergenic 45.0%
GAGTCTGAGAAAATTGGAGG+AGG - chr8_1:23905003-23905022 Msa1186010:intron 45.0%
TGGAGGAGGAATTGTGAAAG+TGG - chr8_1:23905017-23905036 Msa1186010:intron 45.0%
GTGGAACCAAAACCCAGTAA+TGG - chr8_1:23905036-23905055 Msa1186010:intron 45.0%
TTACCAGCAAGCCAATGATG+AGG + chr8_1:23905129-23905148 None:intergenic 45.0%
!! GGAGGTGTTTCATCCTTAAC+AGG + chr8_1:23905159-23905178 None:intergenic 45.0%
TCCTGTTAAAGGCTCTCTTC+CGG - chr8_1:23905191-23905210 Msa1186010:intron 45.0%
TTTGAGTATGTTGTTGGGGG+TGG - chr8_1:23905240-23905259 Msa1186010:intron 45.0%
GTCAGGGACTAATTTGGTTG+CGG - chr8_1:23905500-23905519 Msa1186010:intron 45.0%
! CGCACCTTTTGAGCAATATC+AGG - chr8_1:23906484-23906503 Msa1186010:intron 45.0%
!! GAATGGAGAGTTTGTTAGGG+TGG - chr8_1:23906554-23906573 Msa1186010:intron 45.0%
ACCGGAGAAAACTTCGGATT+TGG + chr8_1:23906582-23906601 None:intergenic 45.0%
! AAATCCGAAGTTTTCTCCGG+TGG - chr8_1:23906581-23906600 Msa1186010:intron 45.0%
! TTTTGCAGGTTTGACGGAGA+TGG - chr8_1:23906822-23906841 Msa1186010:intron 45.0%
TTTGCAGGTTTGACGGAGAT+GGG - chr8_1:23906823-23906842 Msa1186010:intron 45.0%
GTGGACGTTTCTTATGGACA+TGG - chr8_1:23907230-23907249 Msa1186010:intron 45.0%
ATGATGATACAGTGCCTTGC+TGG - chr8_1:23907491-23907510 Msa1186010:intron 45.0%
CAAGAGCTGTATTAGCTGGT+AGG + chr8_1:23907619-23907638 None:intergenic 45.0%
! AGAGTGCTAGAAGCTTCTGA+TGG + chr8_1:23907649-23907668 None:intergenic 45.0%
AAGCTTCTAGCACTCTCAGA+AGG - chr8_1:23907653-23907672 Msa1186010:intron 45.0%
TTGAACAGCCTGATTCAGTC+TGG + chr8_1:23907909-23907928 None:intergenic 45.0%
ACTGAATCAGGCTGTTCAAC+TGG - chr8_1:23907910-23907929 Msa1186010:intron 45.0%
CAACTGGTCAAACCGAAAAC+CGG - chr8_1:23907926-23907945 Msa1186010:intron 45.0%
!! TTCGCTGGTTGGTCTGATAT+CGG - chr8_1:23907953-23907972 Msa1186010:intron 45.0%
TAATCAATCGAACCATGGCC+CGG - chr8_1:23908096-23908115 Msa1186010:intron 45.0%
TTGGATGAGCGGTGAAGTTA+TGG + chr8_1:23908329-23908348 None:intergenic 45.0%
TGGATCTTCCTCTGTACTTC+AGG - chr8_1:23908609-23908628 Msa1186010:intron 45.0%
!! CTTCAGGCCAAAGGTATTGT+AGG - chr8_1:23908625-23908644 Msa1186010:intron 45.0%
TCGACCAAGAAAGCTCGTTT+CGG - chr8_1:23908877-23908896 Msa1186010:intron 45.0%
CCAAATTTGGATTCTCCAGG+CGG + chr8_1:23909315-23909334 None:intergenic 45.0%
CCACCAACCATGTCCAAATT+TGG + chr8_1:23909328-23909347 None:intergenic 45.0%
CCAAATTTGGACATGGTTGG+TGG - chr8_1:23909325-23909344 Msa1186010:intron 45.0%
CATCTGCTGTAGATTTCCCT+AGG - chr8_1:23909528-23909547 Msa1186010:intron 45.0%
GTGTAGCTTTCATTCACCCT+AGG + chr8_1:23909548-23909567 None:intergenic 45.0%
AGGGTGAATGAAAGCTACAC+TGG - chr8_1:23909548-23909567 Msa1186010:intron 45.0%
TGAATGAAAGCTACACTGGC+AGG - chr8_1:23909552-23909571 Msa1186010:intron 45.0%
TTTACACTCAAGTGTGGGAC+AGG + chr8_1:23909670-23909689 None:intergenic 45.0%
! CGTTTTTCCAGAATCCGGTT+TGG + chr8_1:23910250-23910269 None:intergenic 45.0%
TGAAGTTGGAGGAAATGTCG+TGG - chr8_1:23910275-23910294 Msa1186010:intron 45.0%
GAAGTTGGAGGAAATGTCGT+GGG - chr8_1:23910276-23910295 Msa1186010:intron 45.0%
ACAAGTCGATGTGTGTACAG+AGG + chr8_1:23910435-23910454 None:intergenic 45.0%
! TTGTCTTGGCGAGTTCTGAT+TGG + chr8_1:23910513-23910532 None:intergenic 45.0%
GGCAATTCTACAACTGCAAC+AGG + chr8_1:23910824-23910843 None:intergenic 45.0%
CCTCTGTGACAAAGAAAGCA+TGG + chr8_1:23910868-23910887 None:intergenic 45.0%
CCATGCTTTCTTTGTCACAG+AGG - chr8_1:23910865-23910884 Msa1186010:intron 45.0%
! TTTTGCGGTGCTTCTGTTTG+AGG - chr8_1:23911781-23911800 Msa1186010:CDS 45.0%
TTTGCGGTGCTTCTGTTTGA+GGG - chr8_1:23911782-23911801 Msa1186010:CDS 45.0%
GGTCATGGTCATTGACAATG+AGG + chr8_1:23912447-23912466 None:intergenic 45.0%
ACCATGACCATATGCAAAGG+TGG - chr8_1:23912458-23912477 Msa1186010:intron 45.0%
TCCACCTTTGCATATGGTCA+TGG + chr8_1:23912462-23912481 None:intergenic 45.0%
AATTGACAGGTACATCGTGG+GGG - chr8_1:23912486-23912505 Msa1186010:CDS 45.0%
AACTCATTGGGAAGTTACCG+TGG - chr8_1:23912804-23912823 Msa1186010:intron 45.0%
CAGTGCCAATGTTGAAGACT+TGG + chr8_1:23912833-23912852 None:intergenic 45.0%
GGATGAGACACCTCCTATTA+AGG - chr8_1:23913052-23913071 Msa1186010:intron 45.0%
CGCCGCTTATTCACCTTAAA+AGG + chr8_1:23913162-23913181 None:intergenic 45.0%
CATTGTGAGCATAGCTCAGT+TGG + chr8_1:23913223-23913242 None:intergenic 45.0%
GAATCACGGTTTAATGCTGC+TGG - chr8_1:23913621-23913640 Msa1186010:intron 45.0%
!! ACTGTTAGCCGGTTTTTGGA+AGG - chr8_1:23913871-23913890 Msa1186010:intron 45.0%
GCTGCTTGAATAGAGCAACA+TGG + chr8_1:23914098-23914117 None:intergenic 45.0%
CTTGGTCACAGAATGAAGGA+GGG + chr8_1:23914672-23914691 None:intergenic 45.0%
TGTGTGGGAGAGTTTATCCT+TGG + chr8_1:23914690-23914709 None:intergenic 45.0%
TACCGGAGACAATGTTTGCA+GGG - chr8_1:23914814-23914833 Msa1186010:CDS 45.0%
CTAAAGCAATATGCCCATGC+AGG + chr8_1:23915066-23915085 None:intergenic 45.0%
!! ATTTCTGGTTCAGCAGGGAT+TGG + chr8_1:23915091-23915110 None:intergenic 45.0%
!! GACTCTATTTCTGGTTCAGC+AGG + chr8_1:23915097-23915116 None:intergenic 45.0%
GCTGAACCAGAAATAGAGTC+TGG - chr8_1:23915097-23915116 Msa1186010:intron 45.0%
GAAGATTGCTGAGACTGAGT+CGG - chr8_1:23915123-23915142 Msa1186010:intron 45.0%
ACTGAGTCGAAAATAGAGCC+TGG - chr8_1:23915182-23915201 Msa1186010:intron 45.0%
CTGAGTCGAAAATAGAGCCT+GGG - chr8_1:23915183-23915202 Msa1186010:intron 45.0%
AGACTAAGTCTGAACTGCGT+AGG - chr8_1:23915219-23915238 Msa1186010:intron 45.0%
TTGAGTCTGTACTTGAGCCT+AGG - chr8_1:23915258-23915277 Msa1186010:intron 45.0%
GTCTCAGCAATCTTCTTCCT+AGG + chr8_1:23915278-23915297 None:intergenic 45.0%
CACGACGATCCTGAATAACA+AGG + chr8_1:23915556-23915575 None:intergenic 45.0%
! TTCAGGATCGTCGTGACTTT+TGG - chr8_1:23915561-23915580 Msa1186010:intron 45.0%
! TCAGGATCGTCGTGACTTTT+GGG - chr8_1:23915562-23915581 Msa1186010:intron 45.0%
TTCATTGTACTTTCGTCCGC+TGG - chr8_1:23915689-23915708 Msa1186010:intron 45.0%
TTTAAACGGGGTCCTGCAAA+TGG - chr8_1:23916357-23916376 Msa1186010:intron 45.0%
! AGATTAGTCGTTCATTGGGC+TGG - chr8_1:23916400-23916419 Msa1186010:intron 45.0%
AAGCAGCTTAATTCGTACGG+TGG - chr8_1:23917215-23917234 Msa1186010:five_prime_UTR 45.0%
!!! AAATATGTAAAATATTTTAT+AGG - chr8_1:23906073-23906092 Msa1186010:intron 5.0%
!! AATTTAAATTAAAAAGATAA+AGG - chr8_1:23914939-23914958 Msa1186010:intron 5.0%
!!! TTGTTTTAAAAAAAAAAATT+AGG - chr8_1:23915792-23915811 Msa1186010:intron 5.0%
!!! AATTTTATTCAATAAAATAT+GGG + chr8_1:23916046-23916065 None:intergenic 5.0%
!!! AAATTTTATTCAATAAAATA+TGG + chr8_1:23916047-23916066 None:intergenic 5.0%
!!! ATCAATTTTATATATTTATA+AGG + chr8_1:23916565-23916584 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAACTT+AGG + chr8_1:23916862-23916881 None:intergenic 5.0%
!!! AATTAATTTTAAAAATTTAC+GGG + chr8_1:23917112-23917131 None:intergenic 5.0%
!!! GATTAATTATTTTATAATTT+AGG - chr8_1:23917257-23917276 Msa1186010:five_prime_UTR 5.0%
!! CTTCCTCATCATTGGCTTGC+TGG - chr8_1:23905123-23905142 Msa1186010:intron 50.0%
ACCGGAAGAGAGCCTTTAAC+AGG + chr8_1:23905195-23905214 None:intergenic 50.0%
TACCAGTGATATCCAGCCAC+CGG + chr8_1:23906600-23906619 None:intergenic 50.0%
TATCAGACCAACCAGCGAAC+TGG + chr8_1:23907952-23907971 None:intergenic 50.0%
ACCAAACCAGTTAGACCTCC+GGG + chr8_1:23908117-23908136 None:intergenic 50.0%
GACCAAACCAGTTAGACCTC+CGG + chr8_1:23908118-23908137 None:intergenic 50.0%
!! AACTGGTTTGGTCTCCGATC+AGG - chr8_1:23908125-23908144 Msa1186010:intron 50.0%
! GACGGTGATTTGCAGACACT+TGG - chr8_1:23908276-23908295 Msa1186010:intron 50.0%
TCCTCTGTACTTCAGGCCAA+AGG - chr8_1:23908616-23908635 Msa1186010:intron 50.0%
ACCTTTGGCCTGAAGTACAG+AGG + chr8_1:23908620-23908639 None:intergenic 50.0%
GACACCGAAACGAGCTTTCT+TGG + chr8_1:23908884-23908903 None:intergenic 50.0%
TACCTTAGCCAATGCTTGGG+AGG - chr8_1:23909261-23909280 Msa1186010:intron 50.0%
CCGCCTGGAGAATCCAAATT+TGG - chr8_1:23909312-23909331 Msa1186010:intron 50.0%
GTGAAAGGACATGGCCTGTA+AGG + chr8_1:23909890-23909909 None:intergenic 50.0%
TGTCGTGGGTCACTATGACT+TGG - chr8_1:23910290-23910309 Msa1186010:intron 50.0%
GTCGTGGGTCACTATGACTT+GGG - chr8_1:23910291-23910310 Msa1186010:intron 50.0%
! ACTATGACTTGGGACCAGGA+AGG - chr8_1:23910301-23910320 Msa1186010:intron 50.0%
GTTTATGTTCCGTGTGTCCC+TGG - chr8_1:23910339-23910358 Msa1186010:intron 50.0%
!! CTTCTTCAGAATCGGTGCCA+GGG + chr8_1:23910359-23910378 None:intergenic 50.0%
! TCTTCTTCAGAATCGGTGCC+AGG + chr8_1:23910360-23910379 None:intergenic 50.0%
GTACAGAGGAAGGTGATACC+CGG + chr8_1:23910421-23910440 None:intergenic 50.0%
GTCGATGTGTGTACAGAGGA+AGG + chr8_1:23910431-23910450 None:intergenic 50.0%
TCAATGGTTCACCCAGCACA+AGG + chr8_1:23911854-23911873 None:intergenic 50.0%
TGTTGAAGACTTGGGTGCCA+CGG + chr8_1:23912824-23912843 None:intergenic 50.0%
GGCACCCAAGTCTTCAACAT+TGG - chr8_1:23912825-23912844 Msa1186010:intron 50.0%
!! GAGAGGAGGGATTTTGAAGG+TGG - chr8_1:23912905-23912924 Msa1186010:intron 50.0%
!! CTTCCTCATCATTGGCTTGC+CGG - chr8_1:23905123-23905142 Msa1186010:intron 50.0%
TTACCGGCAAGCCAATGATG+AGG + chr8_1:23913017-23913036 None:intergenic 50.0%
!! GGAGGTGTCTCATCCTTAAC+AGG + chr8_1:23913047-23913066 None:intergenic 50.0%
GGTGCAATACAACCTCACCT+CGG - chr8_1:23913642-23913661 Msa1186010:intron 50.0%
GTGCAATACAACCTCACCTC+GGG - chr8_1:23913643-23913662 Msa1186010:intron 50.0%
TAAGACTGAGTGCCAGCGAA+AGG - chr8_1:23914611-23914630 Msa1186010:intron 50.0%
TTTGTCTCCTCTCCTTTCGC+TGG + chr8_1:23914626-23914645 None:intergenic 50.0%
CCTTGGTCACAGAATGAAGG+AGG + chr8_1:23914673-23914692 None:intergenic 50.0%
CCTCCTTCATTCTGTGACCA+AGG - chr8_1:23914670-23914689 Msa1186010:intron 50.0%
CTCCGTAAGTGTAGCTCAGT+TGG - chr8_1:23914787-23914806 Msa1186010:CDS 50.0%
!! GTAGCTCAGTTGGTAGCTAC+CGG - chr8_1:23914797-23914816 Msa1186010:CDS 50.0%
CTACCGGAGACAATGTTTGC+AGG - chr8_1:23914813-23914832 Msa1186010:CDS 50.0%
ACCGGAGACAATGTTTGCAG+GGG - chr8_1:23914815-23914834 Msa1186010:CDS 50.0%
ACCCCTGCAAACATTGTCTC+CGG + chr8_1:23914819-23914838 None:intergenic 50.0%
GAGACAATGTTTGCAGGGGT+CGG - chr8_1:23914819-23914838 Msa1186010:CDS 50.0%
AGACAATGTTTGCAGGGGTC+GGG - chr8_1:23914820-23914839 Msa1186010:CDS 50.0%
TGTTGAGAAGTGGGGAATCC+GGG + chr8_1:23914854-23914873 None:intergenic 50.0%
GTGTTGAGAAGTGGGGAATC+CGG + chr8_1:23914855-23914874 None:intergenic 50.0%
ACTGAGTCGGAAATAGAGCC+TGG - chr8_1:23915136-23915155 Msa1186010:intron 50.0%
CTGAGTCGGAAATAGAGCCT+GGG - chr8_1:23915137-23915156 Msa1186010:intron 50.0%
GGAAATAGAGCCTGGGAACT+GGG - chr8_1:23915144-23915163 Msa1186010:intron 50.0%
CAATGTTCTTCCCAGTTCCC+AGG + chr8_1:23915157-23915176 None:intergenic 50.0%
GTCTCAGCAATCTTCTTCCC+AGG + chr8_1:23915118-23915137 None:intergenic 50.0%
GCGTAGGAAGAAGATTGCTG+AGG - chr8_1:23915235-23915254 Msa1186010:intron 50.0%
AGACTGAGTCTGAACTGCCT+CGG - chr8_1:23915294-23915313 Msa1186010:intron 50.0%
GTCTCAGCAATCTTCTTCCG+AGG + chr8_1:23915314-23915333 None:intergenic 50.0%
ACTGAGTCTGTACTTGAGCC+TGG - chr8_1:23915332-23915351 Msa1186010:intron 50.0%
CTGAGTCTGTACTTGAGCCT+GGG - chr8_1:23915333-23915352 Msa1186010:intron 50.0%
TCGACAATGCGTGCAGATTC+AGG + chr8_1:23915365-23915384 None:intergenic 50.0%
TCTGCACGCATTGTCGACAT+TGG - chr8_1:23915368-23915387 Msa1186010:intron 50.0%
!! CACTCGTCGCCTTGTTATTC+AGG - chr8_1:23915544-23915563 Msa1186010:intron 50.0%
CAATACCACCGTCCATTTGC+AGG + chr8_1:23916372-23916391 None:intergenic 50.0%
CTGCAAATGGACGGTGGTAT+TGG - chr8_1:23916370-23916389 Msa1186010:intron 50.0%
CTAGGCCAGCTATGCCACTA+TGG - chr8_1:23904886-23904905 Msa1186010:intron 55.0%
CCAGCCACCGGAGAAAACTT+CGG + chr8_1:23906588-23906607 None:intergenic 55.0%
TGTCCTACCCCGCTATGCTA+AGG - chr8_1:23908900-23908919 Msa1186010:intron 55.0%
! CATCCTTAGCATAGCGGGGT+AGG + chr8_1:23908906-23908925 None:intergenic 55.0%
!! CTCCTCCCAAGCATTGGCTA+AGG + chr8_1:23909266-23909285 None:intergenic 55.0%
CTTAGCCAATGCTTGGGAGG+AGG - chr8_1:23909264-23909283 Msa1186010:intron 55.0%
ATCCTCCTCCTCCCAAGCAT+TGG + chr8_1:23909272-23909291 None:intergenic 55.0%
!!! TGTTTTGATCACGTGCCGCC+TGG - chr8_1:23909297-23909316 Msa1186010:intron 55.0%
!! CATGGTTGGTGGAGCTGTCA+AGG - chr8_1:23909336-23909355 Msa1186010:intron 55.0%
TTGCACGCCAAACCGGATTC+TGG - chr8_1:23910240-23910259 Msa1186010:intron 55.0%
! GGTCACTATGACTTGGGACC+AGG - chr8_1:23910297-23910316 Msa1186010:intron 55.0%
GACTTGGGACCAGGAAGGTT+TGG - chr8_1:23910306-23910325 Msa1186010:intron 55.0%
!! ACCAGGAAGGTTTGGCTCTG+AGG - chr8_1:23910314-23910333 Msa1186010:intron 55.0%
CTAGGCAGTGCAGTGCAATG+AGG + chr8_1:23912095-23912114 None:intergenic 55.0%
GTGAATAAGCGGCGTGTCCT+GGG - chr8_1:23913168-23913187 Msa1186010:CDS 55.0%
!! ACCTCACCTCGGGTTTGTTG+CGG - chr8_1:23913653-23913672 Msa1186010:intron 55.0%
GACAATGTTTGCAGGGGTCG+GGG - chr8_1:23914821-23914840 Msa1186010:CDS 55.0%
GTTGAGAAGTGGGGAATCCG+GGG + chr8_1:23914853-23914872 None:intergenic 55.0%
TGATGTGAGGGCTACCTGCA+TGG - chr8_1:23915049-23915068 Msa1186010:CDS 55.0%
GATGTGAGGGCTACCTGCAT+GGG - chr8_1:23915050-23915069 Msa1186010:CDS 55.0%
CGGAAATAGAGCCTGGGAAC+TGG - chr8_1:23915143-23915162 Msa1186010:intron 55.0%
! GCAGATTCAGGCTGTTTCCC+AGG + chr8_1:23915353-23915372 None:intergenic 55.0%
AACGGGGTCCTGCAAATGGA+CGG - chr8_1:23916361-23916380 Msa1186010:intron 55.0%
! CCGAAGTTTTCTCCGGTGGC+TGG - chr8_1:23906585-23906604 Msa1186010:intron 60.0%
CTCCGGTGGCTGGATATCAC+TGG - chr8_1:23906595-23906614 Msa1186010:intron 60.0%
!! CCAGCGAACTGGCCGGTTTT+CGG + chr8_1:23907941-23907960 None:intergenic 60.0%
AAACCGGCCAGTTCGCTGGT+TGG - chr8_1:23907942-23907961 Msa1186010:intron 60.0%
AGACCAACCAGCGAACTGGC+CGG + chr8_1:23907948-23907967 None:intergenic 60.0%
TCAATCGAACCATGGCCCGG+AGG - chr8_1:23908099-23908118 Msa1186010:intron 60.0%
GCCCGGAGGTCTAACTGGTT+TGG - chr8_1:23908113-23908132 Msa1186010:intron 60.0%
AGCCAATGCTTGGGAGGAGG+AGG - chr8_1:23909267-23909286 Msa1186010:intron 60.0%
GCCTCAGAGCCAAACCTTCC+TGG + chr8_1:23910318-23910337 None:intergenic 60.0%
!! GAATCGGTGCCAGGGACACA+CGG + chr8_1:23910351-23910370 None:intergenic 60.0%
ACCCTTTGCACGCCTTGTGC+TGG - chr8_1:23911839-23911858 Msa1186010:CDS 60.0%
CCCAGCACAAGGCGTGCAAA+GGG + chr8_1:23911843-23911862 None:intergenic 60.0%
CCCTTTGCACGCCTTGTGCT+GGG - chr8_1:23911840-23911859 Msa1186010:CDS 60.0%
ACCCAGCACAAGGCGTGCAA+AGG + chr8_1:23911844-23911863 None:intergenic 60.0%
GGTGAATAAGCGGCGTGTCC+TGG - chr8_1:23913167-23913186 Msa1186010:CDS 60.0%
TCCGCAACAAACCCGAGGTG+AGG + chr8_1:23913657-23913676 None:intergenic 60.0%
!! TCACCTCGGGTTTGTTGCGG+AGG - chr8_1:23913656-23913675 Msa1186010:intron 60.0%
TCTCCTCCGCAACAAACCCG+AGG + chr8_1:23913662-23913681 None:intergenic 60.0%
CTGAGTGCCAGCGAAAGGAG+AGG - chr8_1:23914616-23914635 Msa1186010:intron 60.0%
GGAGGGAAGCCGCTGCAATT+GGG + chr8_1:23914655-23914674 None:intergenic 60.0%
AGGAGGGAAGCCGCTGCAAT+TGG + chr8_1:23914656-23914675 None:intergenic 60.0%
CCGAAAACCGGCCAGTTCGC+TGG - chr8_1:23907938-23907957 Msa1186010:intron 65.0%
CCAGTTAGACCTCCGGGCCA+TGG + chr8_1:23908111-23908130 None:intergenic 65.0%
CCATGGCCCGGAGGTCTAAC+TGG - chr8_1:23908108-23908127 Msa1186010:intron 65.0%
AGGGGTCGGGGTTTGAACCC+CGG - chr8_1:23914833-23914852 Msa1186010:CDS 65.0%
GGGGTCCTGCAAATGGACGG+TGG - chr8_1:23916364-23916383 Msa1186010:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 23904735 23917304 23904735 ID=Msa1186010;Name=Msa1186010
chr8_1 mRNA 23904735 23917304 23904735 ID=Msa1186010-mRNA-1;Parent=Msa1186010;Name=Msa1186010-mRNA-1;_AED=0.34;_eAED=0.34;_QI=265|0.75|0.84|0.92|0.75|0.84|13|0|511
chr8_1 exon 23904735 23904760 23904735 ID=Msa1186010-mRNA-1:exon:8762;Parent=Msa1186010-mRNA-1
chr8_1 exon 23911153 23911264 23911153 ID=Msa1186010-mRNA-1:exon:8761;Parent=Msa1186010-mRNA-1
chr8_1 exon 23911638 23911869 23911638 ID=Msa1186010-mRNA-1:exon:8760;Parent=Msa1186010-mRNA-1
chr8_1 exon 23912466 23912567 23912466 ID=Msa1186010-mRNA-1:exon:8759;Parent=Msa1186010-mRNA-1
chr8_1 exon 23912653 23912770 23912653 ID=Msa1186010-mRNA-1:exon:8758;Parent=Msa1186010-mRNA-1
chr8_1 exon 23913063 23913201 23913063 ID=Msa1186010-mRNA-1:exon:8757;Parent=Msa1186010-mRNA-1
chr8_1 exon 23913402 23913586 23913402 ID=Msa1186010-mRNA-1:exon:8756;Parent=Msa1186010-mRNA-1
chr8_1 exon 23913673 23913783 23913673 ID=Msa1186010-mRNA-1:exon:8755;Parent=Msa1186010-mRNA-1
chr8_1 exon 23914782 23914881 23914782 ID=Msa1186010-mRNA-1:exon:8754;Parent=Msa1186010-mRNA-1
chr8_1 exon 23914991 23915102 23914991 ID=Msa1186010-mRNA-1:exon:8753;Parent=Msa1186010-mRNA-1
chr8_1 exon 23915195 23915209 23915195 ID=Msa1186010-mRNA-1:exon:8752;Parent=Msa1186010-mRNA-1
chr8_1 exon 23915423 23915493 23915423 ID=Msa1186010-mRNA-1:exon:8751;Parent=Msa1186010-mRNA-1
chr8_1 exon 23916827 23917304 23916827 ID=Msa1186010-mRNA-1:exon:8750;Parent=Msa1186010-mRNA-1
chr8_1 five_prime_UTR 23917040 23917304 23917040 ID=Msa1186010-mRNA-1:five_prime_utr;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23916827 23917039 23916827 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23915423 23915493 23915423 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23915195 23915209 23915195 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23914991 23915102 23914991 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23914782 23914881 23914782 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23913673 23913783 23913673 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23913402 23913586 23913402 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23913063 23913201 23913063 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23912653 23912770 23912653 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23912466 23912567 23912466 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23911638 23911869 23911638 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23911153 23911264 23911153 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
chr8_1 CDS 23904735 23904760 23904735 ID=Msa1186010-mRNA-1:cds;Parent=Msa1186010-mRNA-1
Gene Sequence

>Msa1186010

ATGGAGTCTGAGAAAATTGGAGGAGGAATTGTGAAAGTGGAACCAAAACCCAGTAATGGTTTCACTTCAAAAGCTGTTGATTTATTGGAGAAGATTATTGTGAAGTTGTTTTATGATTCATCACTTCCTCATCATTGGCTTGCTGGTAATTTTGCACCTGTTAAGGATGAAACACCTCCTATTAAGGATCTTCCTGTTAAAGGCTCTCTTCCGGATTGCTTGAATGGAGAGTTTGTTAGGGTGGGACCAAATCCGAAGTTTTCTCCGGTGGCTGGATATCACTGGTTTGACGGAGATGGAATGATTCATGGTTTGCGTATCAAAGATGGAAAAGCTACATATGTTTCCCGTTTTGTGAAAACTTCTCGTCTTAAACAAGAAGAATACTTTGGAGGCTCTAAATTTATGAAGATTGGAGATATGAAAGGTCTATTTGGACTGTTAATGGTTAACATGCAAATGTTGCGAGCTAAATTGAAAGTAGTGGACGTTTCTTATGGACATGGAACAGATGCTATTAAAGTTTTTGAAGACGGTGATTTGCAGACACTTGGCATGCTAGATTATGACAAGAGATTGGGCCATAACTTCACCGCTCATCCAAAAGTTGATCCATTTACTGGAGAGATGTTTACATTTGGATATTCACATACACCACCGTATATCACATACAGAGTAATTTCAAAGGACGGTTTTATGCATGATCCTGTTCCCGTAACAATATCAGAGCCAATCATGATGCATGACTTTGCTATCACAGAGAATTATTCAATATTTATGGATCTTCCTCTGTACTTCAGGCCAAAGGAAATGGTGAAGAATAAGACACTGATATTCTCTTTTGATTCGACCAAGAAAGCTCGTTTCGGTGTCCTACCCCGCTATGCTAAGGATGAAAAGCATATTAGATGGTTCGAACTACCAAACTGCTTCATATTCCACAATGCCAATGCTTGGGAGGAGGAGGATGAAATTGTTTTGATCACGTGCCGCCTGGAGAATCCAAATTTGGACATGGTTGGTGGAGCTGTCAAGGAAAAACTTGATAATTTCGCAAATGAGCTGTATGAAATGAGATTTAACATGAAAACCGGTGAAGCTTCTCAAAAGAAGCTATCAGCATCTGCTGTAGATTTCCCTAGGGTGAATGAAAGCTACACTGGCAGGAAACAACGATATGTATATGGGACCGAATTAGACAGCATTGCTAAAGTTACTGGGATTGTTAAATTTGATTTGCACGCCAAACCGGATTCTGGAAAAACGAAGCTTGAAGTTGGAGGAAATGTCGTGGGTCACTATGACTTGGGACCAGGAAGGTTTGGCTCTGAGGCTGTTTATGTTCCGTGTGTCCCTGGCACCGATTCTGAAGAAGATGATGGATACCTGATCTTTTTTGAAATCATTCGTGCACGTCTTAGATGCAAAAACGATGTCAGCAGATCCTGTTGCAGTTGTAGAATTGCCTCAAAGAGTTCCATATGGTTTCCATGCTTTCTTTGTCACAGAGGACAAATGTCATTATCTTGGACTTAG

Protein sequence

>Msa1186010

MESEKIGGGIVKVEPKPSNGFTSKAVDLLEKIIVKLFYDSSLPHHWLAGNFAPVKDETPPIKDLPVKGSLPDCLNGEFVRVGPNPKFSPVAGYHWFDGDGMIHGLRIKDGKATYVSRFVKTSRLKQEEYFGGSKFMKIGDMKGLFGLLMVNMQMLRAKLKVVDVSYGHGTDAIKVFEDGDLQTLGMLDYDKRLGHNFTAHPKVDPFTGEMFTFGYSHTPPYITYRVISKDGFMHDPVPVTISEPIMMHDFAITENYSIFMDLPLYFRPKEMVKNKTLIFSFDSTKKARFGVLPRYAKDEKHIRWFELPNCFIFHNANAWEEEDEIVLITCRLENPNLDMVGGAVKEKLDNFANELYEMRFNMKTGEASQKKLSASAVDFPRVNESYTGRKQRYVYGTELDSIAKVTGIVKFDLHAKPDSGKTKLEVGGNVVGHYDLGPGRFGSEAVYVPCVPGTDSEEDDGYLIFFEIIRARLRCKNDVSRSCCSCRIASKSSIWFPCFLCHRGQMSLSWT*