AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0431390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431390 MtrunA17_Chr3g0135961 95.628 549 18 2 1 543 1 549 0.0 1069
Msa0431390 MtrunA17_Chr1g0150781 66.545 547 173 4 6 543 8 553 0.0 716
Msa0431390 MtrunA17_Chr4g0070871 46.429 560 236 13 1 543 1 513 2.90e-153 448
Msa0431390 MtrunA17_Chr2g0299981 44.463 587 240 18 1 543 1 545 1.06e-147 435
Msa0431390 MtrunA17_Chr8g0389921 49.191 309 139 5 230 538 149 439 5.55e-87 276
Msa0431390 MtrunA17_Chr3g0112291 42.508 327 147 3 222 538 85 380 2.32e-79 254
Msa0431390 MtrunA17_Chr5g0396731 45.338 311 142 6 227 536 70 353 4.28e-73 236
Msa0431390 MtrunA17_Chr1g0158781 46.519 316 129 7 222 535 104 381 3.45e-72 235
Msa0431390 MtrunA17_Chr5g0435721 44.660 309 122 5 226 520 189 462 1.67e-69 231
Msa0431390 MtrunA17_Chr1g0150451 35.762 302 136 7 230 531 78 321 1.78e-43 157
Msa0431390 MtrunA17_Chr3g0136711 35.762 302 136 7 230 531 35 278 2.33e-43 156
Msa0431390 MtrunA17_Chr3g0126511 35.275 309 140 7 231 538 96 345 6.34e-42 154
Msa0431390 MtrunA17_Chr1g0212961 35.762 302 132 9 230 531 96 335 1.72e-41 152
Msa0431390 MtrunA17_Chr5g0430481 35.496 262 132 7 275 534 149 375 2.32e-37 142
Msa0431390 MtrunA17_Chr3g0105371 32.468 308 149 10 231 534 87 339 4.80e-34 132
Msa0431390 MtrunA17_Chr3g0105351 30.844 308 154 9 231 534 63 315 7.03e-33 128
Msa0431390 MtrunA17_Chr4g0050381 33.835 266 132 7 273 535 54 278 2.29e-31 122
Msa0431390 MtrunA17_Chr4g0065141 30.421 309 158 10 237 536 93 353 2.16e-30 122
Msa0431390 MtrunA17_Chr5g0407161 33.333 258 128 7 280 531 124 343 2.22e-30 122
Msa0431390 MtrunA17_Chr1g0171571 30.744 309 159 8 230 534 388 645 4.05e-29 122
Msa0431390 MtrunA17_Chr8g0360351 32.453 265 133 7 271 531 57 279 1.55e-27 112
Msa0431390 MtrunA17_Chr3g0136811 28.912 294 143 7 230 483 24 291 1.77e-27 114
Msa0431390 MtrunA17_Chr3g0144111 32.171 258 110 7 280 531 27 225 5.52e-27 110
Msa0431390 MtrunA17_Chr2g0317021 31.343 268 138 7 271 534 108 333 8.17e-27 111
Msa0431390 MtrunA17_Chr1g0194191 31.298 262 146 8 280 535 118 351 8.94e-27 112
Msa0431390 MtrunA17_Chr4g0001761 27.954 347 167 11 230 534 24 329 1.03e-26 111
Msa0431390 MtrunA17_Chr2g0293811 28.947 266 147 7 280 535 100 333 2.06e-26 110
Msa0431390 MtrunA17_Chr5g0426141 33.721 258 127 7 280 534 66 282 2.61e-26 108
Msa0431390 MtrunA17_Chr3g0127091 26.239 343 171 11 225 533 55 349 3.10e-26 110
Msa0431390 MtrunA17_Chr3g0115851 32.075 265 136 7 273 534 59 282 1.64e-25 106
Msa0431390 MtrunA17_Chr3g0138281 30.797 276 147 9 268 536 110 348 1.81e-25 108
Msa0431390 MtrunA17_Chr4g0051661 32.157 255 128 8 280 531 183 395 2.72e-25 108
Msa0431390 MtrunA17_Chr1g0150071 28.136 295 148 7 230 485 24 293 2.16e-24 104
Msa0431390 MtrunA17_Chr2g0279151 30.943 265 139 7 273 534 58 281 3.77e-24 102
Msa0431390 MtrunA17_Chr1g0185141 32.589 224 96 6 358 535 226 440 6.00e-24 106
Msa0431390 MtrunA17_Chr4g0067711 32.479 234 120 8 275 478 86 311 2.23e-21 95.9
Msa0431390 MtrunA17_Chr4g0066371 30.126 239 114 11 278 481 84 304 1.05e-20 94.4
Msa0431390 MtrunA17_Chr1g0207571 28.438 320 166 12 257 533 38 337 2.31e-20 93.2
Msa0431390 MtrunA17_Chr1g0151781 32.051 234 132 7 269 478 57 287 2.82e-20 92.4
Msa0431390 MtrunA17_Chr7g0243571 31.667 240 125 9 275 478 87 323 4.50e-20 93.2
Msa0431390 MtrunA17_Chr8g0371321 27.891 294 153 10 280 533 79 353 5.99e-20 92.0
Msa0431390 MtrunA17_Chr7g0250061 27.667 300 142 12 280 531 76 348 2.30e-18 87.4
Msa0431390 MtrunA17_Chr1g0192421 32.609 230 115 9 280 478 89 309 2.43e-18 86.7
Msa0431390 MtrunA17_Chr2g0324061 27.575 301 158 11 235 478 25 322 3.73e-18 87.4
Msa0431390 MtrunA17_Chr6g0483411 27.037 270 151 9 281 534 80 319 4.54e-18 85.5
Msa0431390 MtrunA17_Chr3g0133801 29.123 285 138 10 277 541 63 303 7.43e-18 86.3
Msa0431390 MtrunA17_Chr7g0263281 27.184 309 164 11 269 536 60 348 2.73e-17 84.0
Msa0431390 MtrunA17_Chr2g0295401 29.258 229 134 7 275 478 87 312 5.23e-17 82.8
Msa0431390 MtrunA17_Chr1g0181901 29.437 231 121 7 280 478 76 296 6.96e-17 82.8
Msa0431390 MtrunA17_Chr1g0209451 27.891 294 154 10 252 533 50 297 9.35e-17 82.8
Msa0431390 MtrunA17_Chr4g0022171 28.862 246 134 9 271 478 87 329 2.54e-16 81.6
Msa0431390 MtrunA17_Chr4g0004971 28.517 263 143 9 271 490 68 328 2.59e-16 80.5
Msa0431390 MtrunA17_Chr1g0211251 26.936 297 152 11 280 533 81 355 3.29e-16 80.9
Msa0431390 MtrunA17_Chr1g0153671 27.393 303 154 10 252 538 47 299 5.51e-16 80.5
Msa0431390 MtrunA17_Chr2g0294291 25.862 290 165 9 280 533 75 350 5.84e-16 79.7
Msa0431390 MtrunA17_Chr7g0221691 28.618 304 149 13 237 478 71 368 1.42e-15 79.3
Msa0431390 MtrunA17_Chr7g0272061 29.185 233 128 8 280 478 91 320 2.46e-15 77.8
Msa0431390 MtrunA17_Chr3g0089721 27.575 301 149 12 280 533 68 346 2.67e-15 77.8
Msa0431390 MtrunA17_Chr7g0249421 28.028 289 136 10 259 478 58 343 9.61e-15 77.0
Msa0431390 MtrunA17_Chr3g0089711 27.243 301 150 12 280 533 68 346 9.94e-15 75.9
Msa0431390 MtrunA17_Chr7g0271971 29.368 269 134 9 281 533 69 297 1.61e-14 75.9
Msa0431390 MtrunA17_Chr7g0225501 30.882 204 120 7 281 473 87 280 2.47e-14 75.5
Msa0431390 MtrunA17_Chr7g0238501 26.190 294 173 11 280 536 263 549 1.66e-13 73.2
Msa0431390 MtrunA17_Chr7g0256751 28.151 238 119 11 280 480 69 291 1.17e-12 70.1
Msa0431390 MtrunA17_Chr7g0256771 28.226 248 133 11 280 493 70 306 2.43e-12 68.2
Msa0431390 MtrunA17_Chr1g0192471 26.838 272 151 8 274 533 62 297 3.47e-12 68.6
Msa0431390 MtrunA17_Chr3g0089691 29.412 221 102 9 357 533 50 260 6.39e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0431390 AT1G72770.4 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0431390 AT1G72770.1 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0431390 AT1G72770.3 55.300 434 169 5 121 543 92 511 9.93e-162 470
Msa0431390 AT1G17550.1 54.005 437 182 4 120 543 81 511 7.85e-158 460
Msa0431390 AT1G17550.2 54.005 437 182 4 120 543 81 511 7.85e-158 460
Msa0431390 AT5G57050.1 64.602 339 105 5 210 543 93 421 3.16e-146 427
Msa0431390 AT5G57050.2 64.602 339 105 5 210 543 53 381 4.07e-146 426
Msa0431390 AT4G26080.1 63.824 340 99 7 210 542 109 431 1.27e-143 421
Msa0431390 AT1G72770.2 49.691 324 138 5 121 433 92 401 3.25e-94 293
Msa0431390 AT1G72770.5 49.691 324 138 5 121 433 92 401 3.25e-94 293
Msa0431390 AT5G57050.3 60.526 228 79 4 210 437 93 309 5.65e-85 266
Msa0431390 AT1G07430.1 41.389 360 140 8 219 538 110 438 5.60e-78 252
Msa0431390 AT2G29380.1 44.654 318 135 7 227 534 75 361 2.28e-77 248
Msa0431390 AT5G51760.2 43.519 324 148 5 228 534 77 382 1.48e-73 239
Msa0431390 AT5G51760.1 43.519 324 148 5 228 534 107 412 2.99e-73 239
Msa0431390 AT3G11410.1 46.863 271 96 5 228 480 103 343 1.32e-71 234
Msa0431390 AT5G59220.1 45.620 274 108 5 228 491 110 352 8.08e-68 225
Msa0431390 AT5G59220.2 43.519 216 83 5 228 433 110 296 1.64e-46 165
Msa0431390 AT1G43900.1 34.839 310 133 8 230 534 124 369 1.38e-44 162
Msa0431390 AT5G53140.1 34.098 305 141 6 231 534 103 348 3.69e-42 156
Msa0431390 AT5G53140.2 34.098 305 141 6 231 534 103 348 3.69e-42 156
Msa0431390 AT5G10740.1 35.197 304 135 9 230 531 34 277 6.92e-41 151
Msa0431390 AT5G10740.2 35.197 304 135 9 230 531 34 277 6.92e-41 151
Msa0431390 AT4G31750.2 34.437 302 140 7 230 531 34 277 9.29e-41 149
Msa0431390 AT4G31750.1 33.775 302 142 6 230 531 34 277 1.14e-40 149
Msa0431390 AT4G31750.3 33.775 302 142 6 230 531 34 277 1.14e-40 149
Msa0431390 AT5G24940.1 35.314 303 136 9 230 531 34 277 1.41e-40 152
Msa0431390 AT1G67820.2 37.857 280 118 9 230 499 85 318 1.48e-39 149
Msa0431390 AT1G67820.1 37.857 280 118 9 230 499 121 354 3.88e-39 149
Msa0431390 AT2G30020.1 34.385 317 133 10 231 534 139 393 1.26e-34 135
Msa0431390 AT1G07160.1 33.660 306 149 9 231 533 122 376 8.62e-34 132
Msa0431390 AT2G40180.1 35.156 256 135 7 280 534 161 386 9.03e-32 127
Msa0431390 AT2G40860.4 31.629 313 148 10 231 534 296 551 2.76e-31 128
Msa0431390 AT2G40860.1 31.629 313 148 10 231 534 394 649 6.47e-31 127
Msa0431390 AT2G33700.1 33.333 258 128 7 280 531 123 342 6.64e-31 124
Msa0431390 AT3G51470.2 32.103 271 140 9 267 531 49 281 1.57e-29 119
Msa0431390 AT1G22280.3 33.086 269 136 9 272 534 57 287 1.69e-29 118
Msa0431390 AT3G51470.1 31.734 271 141 8 267 531 93 325 2.05e-29 119
Msa0431390 AT3G62260.3 32.946 258 140 7 280 531 27 257 2.12e-29 118
Msa0431390 AT2G34740.1 34.351 262 126 9 276 533 115 334 6.20e-29 117
Msa0431390 AT3G62260.2 32.946 258 140 7 280 531 117 347 6.50e-29 118
Msa0431390 AT3G62260.1 32.946 258 140 7 280 531 116 346 7.05e-29 118
Msa0431390 AT3G15260.2 32.841 271 130 8 271 534 64 289 3.14e-28 114
Msa0431390 AT3G15260.1 32.841 271 130 8 271 534 64 289 3.14e-28 114
Msa0431390 AT2G40860.2 31.660 259 131 7 231 480 394 615 4.05e-28 119
Msa0431390 AT1G78200.5 31.955 266 140 7 272 534 11 238 2.42e-27 110
Msa0431390 AT1G78200.4 31.955 266 140 7 272 534 11 238 2.42e-27 110
Msa0431390 AT3G17250.1 28.736 261 150 5 280 531 158 391 3.70e-27 114
Msa0431390 AT1G78200.1 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0431390 AT1G78200.3 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0431390 AT1G78200.2 31.955 266 140 7 272 534 56 283 1.00e-26 110
Msa0431390 AT1G22280.1 32.342 269 132 9 272 534 57 281 1.07e-26 110
Msa0431390 AT2G25620.1 29.851 268 141 7 280 536 128 359 3.71e-26 110
Msa0431390 AT2G25620.2 29.851 268 141 7 280 536 128 359 3.71e-26 110
Msa0431390 AT1G48040.1 30.769 260 144 7 280 531 116 347 1.55e-25 108
Msa0431390 AT2G25070.1 29.275 345 166 14 230 534 24 330 4.80e-25 107
Msa0431390 AT2G25070.2 29.275 345 166 14 230 534 24 330 4.80e-25 107
Msa0431390 AT1G34750.2 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0431390 AT1G34750.1 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0431390 AT1G34750.3 33.333 261 124 9 280 534 66 282 1.01e-24 104
Msa0431390 AT4G28400.1 28.280 343 172 12 201 533 4 282 2.60e-24 103
Msa0431390 AT3G63320.2 31.034 232 103 7 358 542 85 306 4.97e-24 104
Msa0431390 AT3G16800.2 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0431390 AT3G16800.1 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0431390 AT3G16800.3 30.627 271 144 8 263 492 68 335 5.29e-24 103
Msa0431390 AT4G31860.3 29.252 294 142 10 230 483 24 291 7.50e-24 102
Msa0431390 AT3G63340.12 28.391 317 164 10 269 535 144 447 1.22e-23 105
Msa0431390 AT3G63320.1 31.034 232 103 7 358 542 168 389 1.26e-23 103
Msa0431390 AT4G31860.1 29.252 294 142 10 230 483 24 291 3.99e-23 101
Msa0431390 AT3G63340.11 28.391 317 164 10 269 535 144 447 9.48e-23 103
Msa0431390 AT3G63340.7 28.391 317 164 10 269 535 144 447 9.70e-23 103
Msa0431390 AT3G63340.5 28.391 317 164 10 269 535 144 447 1.01e-22 103
Msa0431390 AT3G63340.1 28.391 317 164 10 269 535 144 447 1.01e-22 103
Msa0431390 AT3G63340.8 28.391 317 164 10 269 535 144 447 1.02e-22 103
Msa0431390 AT3G63340.6 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0431390 AT3G63340.3 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0431390 AT3G63340.10 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0431390 AT3G63340.4 28.391 317 164 10 269 535 144 447 1.06e-22 103
Msa0431390 AT4G28400.3 30.385 260 131 8 280 533 45 260 1.58e-22 97.8
Msa0431390 AT3G16800.4 31.276 243 131 7 283 492 1 240 1.82e-22 97.4
Msa0431390 AT3G16800.6 31.276 243 131 7 283 492 1 240 1.82e-22 97.4
Msa0431390 AT4G27800.1 26.393 341 169 12 227 533 56 348 3.48e-22 99.0
Msa0431390 AT2G34740.3 36.364 198 101 7 280 473 115 291 5.77e-22 97.1
Msa0431390 AT3G55050.1 29.836 305 152 10 280 543 84 367 6.93e-22 98.2
Msa0431390 AT3G55050.2 29.836 305 152 10 280 543 84 367 6.93e-22 98.2
Msa0431390 AT2G34740.2 36.364 198 101 7 280 473 133 309 6.96e-22 97.1
Msa0431390 AT3G51370.1 28.912 294 150 10 280 533 79 353 7.19e-22 98.2
Msa0431390 AT3G51370.3 28.912 294 150 10 280 533 79 353 7.19e-22 98.2
Msa0431390 AT4G38520.2 29.795 292 146 10 280 531 81 353 8.17e-22 98.2
Msa0431390 AT4G38520.1 29.795 292 146 10 280 531 81 353 8.17e-22 98.2
Msa0431390 AT3G17090.1 28.028 289 159 8 280 533 84 358 1.34e-21 97.4
Msa0431390 AT2G20630.1 29.588 267 126 8 280 534 63 279 2.30e-21 94.7
Msa0431390 AT4G33920.1 27.586 319 171 11 257 533 38 338 4.54e-21 95.9
Msa0431390 AT5G66080.1 29.966 297 143 12 280 533 82 356 1.65e-20 94.0
Msa0431390 AT4G31860.2 29.496 278 130 10 230 467 24 275 2.62e-20 91.7
Msa0431390 AT2G20630.2 29.572 257 131 7 280 530 63 275 3.67e-20 91.3
Msa0431390 AT2G40860.3 29.289 239 123 7 231 460 394 595 9.12e-20 93.6
Msa0431390 AT5G02760.1 29.630 243 119 9 273 478 63 290 1.40e-19 91.3
Msa0431390 AT3G63340.2 39.865 148 75 6 392 535 343 480 1.76e-19 93.2
Msa0431390 AT5G27930.1 33.778 225 120 9 280 478 92 313 2.85e-19 90.1
Msa0431390 AT5G27930.2 33.778 225 120 9 280 478 92 313 2.85e-19 90.1
Msa0431390 AT4G08260.1 29.528 254 115 6 281 534 20 209 3.77e-19 86.7
Msa0431390 AT4G28400.2 28.315 279 147 10 201 469 4 239 4.58e-19 87.4
Msa0431390 AT3G06270.1 25.256 293 150 7 277 534 85 343 4.71e-19 89.4
Msa0431390 AT1G17545.1 39.456 147 42 4 252 397 78 178 6.20e-19 85.1
Msa0431390 AT4G03415.1 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0431390 AT4G03415.3 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0431390 AT4G03415.2 30.769 247 129 7 271 478 88 331 7.33e-19 90.1
Msa0431390 AT3G17090.2 28.448 232 126 6 280 480 84 306 1.78e-18 87.0
Msa0431390 AT1G09160.2 29.811 265 138 8 281 533 69 297 2.15e-18 88.2
Msa0431390 AT1G09160.1 29.811 265 138 8 281 533 69 297 2.15e-18 88.2
Msa0431390 AT1G34750.4 33.659 205 105 8 280 478 66 245 3.80e-18 84.7
Msa0431390 AT5G26010.1 30.802 237 133 7 263 478 56 282 5.67e-18 85.9
Msa0431390 AT1G68410.4 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0431390 AT1G68410.3 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0431390 AT1G68410.1 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0431390 AT1G68410.2 28.315 279 152 8 274 540 67 309 8.62e-18 86.3
Msa0431390 AT3G12620.2 26.689 296 160 9 280 536 83 360 8.93e-18 85.9
Msa0431390 AT3G12620.1 26.689 296 160 9 280 536 83 360 8.93e-18 85.9
Msa0431390 AT3G51370.2 30.942 223 107 7 351 533 53 268 1.17e-17 84.3
Msa0431390 AT4G27800.2 26.117 291 150 10 227 483 56 315 2.43e-17 84.0
Msa0431390 AT4G27800.3 26.117 291 150 10 227 483 56 315 2.68e-17 83.6
Msa0431390 AT5G66080.2 32.110 218 99 7 356 533 44 252 5.31e-17 82.0
Msa0431390 AT1G03590.1 30.328 244 131 7 271 478 81 321 9.19e-17 83.6
Msa0431390 AT3G05640.2 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0431390 AT3G05640.1 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0431390 AT3G05640.3 32.420 219 125 8 280 478 93 308 1.36e-16 82.0
Msa0431390 AT1G47380.1 28.159 277 135 10 277 533 61 293 7.08e-16 80.5
Msa0431390 AT1G18030.2 27.700 213 108 7 281 469 110 300 1.02e-15 78.6
Msa0431390 AT5G36250.1 28.854 253 125 10 280 481 98 346 1.32e-15 79.7
Msa0431390 AT4G33920.2 29.200 250 126 9 326 533 15 255 1.16e-14 75.1
Msa0431390 AT5G06750.3 25.510 294 159 9 280 531 82 357 1.18e-14 76.3
Msa0431390 AT5G06750.1 25.510 294 159 9 280 531 82 357 1.18e-14 76.3
Msa0431390 AT4G32950.1 28.428 299 154 12 268 537 53 320 3.12e-14 74.3
Msa0431390 AT4G33920.3 29.018 224 113 7 351 533 7 225 1.49e-13 71.6
Msa0431390 AT1G79630.6 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0431390 AT1G79630.3 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0431390 AT1G79630.4 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0431390 AT1G79630.5 36.496 137 71 3 358 478 112 248 4.29e-13 71.6
Msa0431390 AT1G79630.2 36.496 137 71 3 358 478 152 288 4.84e-13 71.6
Msa0431390 AT1G79630.7 36.496 137 71 3 358 478 152 288 4.84e-13 71.6
Msa0431390 AT1G79630.8 36.496 137 71 3 358 478 218 354 5.60e-13 71.6
Msa0431390 AT1G79630.1 36.496 137 71 3 358 478 222 358 6.39e-13 71.6
Msa0431390 AT3G02750.2 28.794 257 118 9 280 474 95 348 1.46e-12 70.5
Msa0431390 AT3G02750.1 28.794 257 118 9 280 474 95 348 1.46e-12 70.5
Msa0431390 AT1G16220.1 28.395 243 124 8 282 478 97 335 3.27e-12 69.3
Msa0431390 AT3G16560.1 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0431390 AT3G16560.4 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0431390 AT3G16560.2 23.249 357 192 13 255 543 149 491 4.15e-11 65.9
Msa0431390 AT2G05050.1 34.307 137 67 3 406 534 69 190 4.67e-11 62.8
Msa0431390 AT5G36250.3 27.490 251 126 11 280 478 98 344 5.30e-11 64.7

Find 185 sgRNAs with CRISPR-Local

Find 295 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGAACGGTCATCGTGTATT+TGG 0.163856 3_2:+83463218 Msa0431390:CDS
TTCAAGAAAGGTCTAATAAT+TGG 0.183931 3_2:+83462810 Msa0431390:CDS
CGTCTGTGCTGTTTATAAAA+AGG 0.205377 3_2:+83464420 Msa0431390:three_prime_UTR
CACAATTTGAAACAATGATA+TGG 0.225713 3_2:-83462986 None:intergenic
AGATGATGAATGTCTCATTT+TGG 0.235752 3_2:+83463812 Msa0431390:CDS
AGGATGATTGTCGAGATTTA+TGG 0.247331 3_2:+83462841 Msa0431390:CDS
GAGCAGACAATTCATTTCTT+TGG 0.249168 3_2:+83462097 Msa0431390:CDS
TAATAATGTTTAGAAAATTA+AGG 0.257295 3_2:+83460482 Msa0431390:five_prime_UTR
GCAGTGGAACCAACAGTTTC+TGG 0.262096 3_2:-83462939 None:intergenic
GGAACGGTCATCGTGTATTT+GGG 0.262882 3_2:+83463219 Msa0431390:CDS
GAATCATCCTCATCAACTTC+TGG 0.268753 3_2:-83461575 None:intergenic
ACTGAATTACCAGCTATTAA+TGG 0.274602 3_2:-83461299 None:intergenic
AAGTTAGATGCGTCGATAAA+TGG 0.284958 3_2:+83461031 Msa0431390:five_prime_UTR
GATAAATAAGAAGCAAAATT+AGG 0.288235 3_2:+83460587 Msa0431390:five_prime_UTR
CTCGTAGGCGCATACTTCTT+TGG 0.293148 3_2:+83463886 Msa0431390:CDS
CCTCTATAATTGAGGCAAAT+AGG 0.301074 3_2:+83460971 Msa0431390:five_prime_UTR
CGAGGGATGAATGTAATTTC+TGG 0.303563 3_2:-83463783 None:intergenic
GATAGAGTGCTATAAATAAT+TGG 0.304488 3_2:-83461617 None:intergenic
GACATGGCGACACATGTAAA+AGG 0.307100 3_2:-83464312 None:intergenic
AATCCGAGATTGTAATGTTA+TGG 0.311904 3_2:+83464614 Msa0431390:three_prime_UTR
ATTCCTATTCAAATGCTAAA+TGG 0.318655 3_2:+83462037 Msa0431390:CDS
TCATTGTACACTGCTGCATT+GGG 0.322875 3_2:+83464241 Msa0431390:three_prime_UTR
CAATTCTATCTCCTCAATTA+AGG 0.332423 3_2:-83462787 None:intergenic
ATTGGATTGTACCCCACTTT+GGG 0.334782 3_2:+83461943 Msa0431390:CDS
CAAAGCATAGGCTAGTTAAA+AGG 0.337166 3_2:-83461102 None:intergenic
ATATGATATATTATATGATA+TGG 0.347502 3_2:-83460410 None:intergenic
ACTTTATGATCCTCAGATAA+AGG 0.347979 3_2:-83463050 None:intergenic
GCATATTCATCATCTCGATT+TGG 0.348554 3_2:-83463161 None:intergenic
GAACTCAATCGATTATAGTT+TGG 0.348649 3_2:+83464126 Msa0431390:three_prime_UTR
CAAAAGTTGACGATGAAGTT+GGG 0.354429 3_2:+83462889 Msa0431390:CDS
TTGCTGCTTATTGTAGATAT+AGG 0.355200 3_2:+83464281 Msa0431390:three_prime_UTR
AGCTACTCACATGGATGTTT+CGG 0.358015 3_2:+83461340 Msa0431390:CDS
TTCATTGTACACTGCTGCAT+TGG 0.375847 3_2:+83464240 Msa0431390:three_prime_UTR
CTTGCAATGTCAAGGTCTAT+TGG 0.375904 3_2:+83463245 Msa0431390:CDS
GATGAATGTAATTTCTGGTT+CGG 0.378751 3_2:-83463778 None:intergenic
CCTATTTGCCTCAATTATAG+AGG 0.379269 3_2:-83460971 None:intergenic
TCTGCAAAGCACGGTTTGAT+AGG 0.384139 3_2:-83463986 None:intergenic
TGAGGATGATTCATTATCAT+TGG 0.384599 3_2:+83461586 Msa0431390:CDS
TTACCATTTAGCATTTGAAT+AGG 0.388620 3_2:-83462040 None:intergenic
ATGAATGTAATTTCTGGTTC+GGG 0.389648 3_2:-83463777 None:intergenic
TCTGGTTCGGGAATAATTGA+TGG 0.390178 3_2:-83463765 None:intergenic
ATGGAATATCTTTACATTCT+CGG 0.390429 3_2:+83461165 Msa0431390:five_prime_UTR
CCAACAGTTTCTGGTGCAAC+AGG 0.410983 3_2:-83462930 None:intergenic
CATTTCTTTGGAGTCTATGA+TGG 0.413040 3_2:+83462109 Msa0431390:CDS
TTGTCGAGATCGTATGCATT+TGG 0.418518 3_2:+83462764 Msa0431390:CDS
CATATCATTGTTTCAAATTG+TGG 0.420325 3_2:+83462987 Msa0431390:CDS
TAGCAGAGTCTTTGTTCTCT+AGG 0.423397 3_2:-83464375 None:intergenic
AATGGACTTGTGGTTATTGT+TGG 0.426016 3_2:+83464666 Msa0431390:three_prime_UTR
ATATCATATAATATATCATA+TGG 0.430153 3_2:+83460412 Msa0431390:five_prime_UTR
AAGTCACTCTCAGAACTTAG+TGG 0.430762 3_2:-83464693 None:intergenic
AATTGGATTGTACCCCACTT+TGG 0.433234 3_2:+83461942 Msa0431390:CDS
TCAAAAGTTGACGATGAAGT+TGG 0.435587 3_2:+83462888 Msa0431390:CDS
TTTGGCTAGTGATGGCTTGT+GGG 0.438940 3_2:+83463830 Msa0431390:CDS
CAAAATAATGGGTCTCAGTC+AGG 0.439815 3_2:+83460534 Msa0431390:five_prime_UTR
GGATCATATTGGTGACAATC+TGG 0.441264 3_2:+83461448 Msa0431390:CDS
AGCGAGAATGGTAGTGTTTG+TGG 0.441976 3_2:+83461647 Msa0431390:CDS
TGATGGCCATGGTGGCTCTC+AGG 0.443960 3_2:+83462126 Msa0431390:CDS
TTGAGCCTTGGAGATGAAAC+AGG 0.444513 3_2:+83461830 Msa0431390:CDS
AAGAAGAATATACTAGTGTC+TGG 0.447141 3_2:+83460999 Msa0431390:five_prime_UTR
AATCATCCTCATCAACTTCT+GGG 0.449390 3_2:-83461574 None:intergenic
GGGAATTTGTCATTTAGTGC+AGG 0.450678 3_2:-83464186 None:intergenic
AATTGAGAGTTCTAATGAAA+GGG 0.454894 3_2:-83464207 None:intergenic
ACAATTTGAAACAATGATAT+GGG 0.458813 3_2:-83462985 None:intergenic
GCTCAGAGCTGTCCTTAGTA+AGG 0.460695 3_2:+83463922 Msa0431390:CDS
GGTTCTGATGAGGATCATAT+TGG 0.469950 3_2:+83461437 Msa0431390:CDS
AGTTGATGAAGAACTGTAGT+AGG 0.475769 3_2:-83461872 None:intergenic
TATGCATTTGGCCTTAATTG+AGG 0.478714 3_2:+83462776 Msa0431390:CDS
TTCTGTCGAAATTGTTGCTA+GGG 0.480888 3_2:+83461745 Msa0431390:CDS
GCAACAGCATCTTCCATCTC+AGG 0.483340 3_2:-83461992 None:intergenic
GGGAATCGATCTTGCCGCAC+AGG 0.486234 3_2:+83463950 Msa0431390:CDS
CTTTCAAGCCTCTATAATTG+AGG 0.491386 3_2:+83460963 Msa0431390:five_prime_UTR
TGCTTCCTTTCTGCAAAGCA+CGG 0.492118 3_2:-83463995 None:intergenic
CATGTCTAAGATAAAACTAA+AGG 0.492506 3_2:-83461145 None:intergenic
GATGATTCATTATCATTGGA+AGG 0.493253 3_2:+83461590 Msa0431390:CDS
TTGGGGTTCTTGCAATGTCA+AGG 0.493275 3_2:+83463237 Msa0431390:CDS
GCAGTCGTTCCACCTTTGCA+TGG 0.494709 3_2:+83461491 Msa0431390:CDS
CACCTTTGCATGGGAGAGAA+GGG 0.497032 3_2:+83461501 Msa0431390:CDS
CTTCTGTCGAAATTGTTGCT+AGG 0.503030 3_2:+83461744 Msa0431390:CDS
AATGGTAACAGCAAATATGA+TGG 0.504473 3_2:+83462055 Msa0431390:CDS
TGGGGATTTACATCTTTATG+TGG 0.506261 3_2:+83461962 Msa0431390:CDS
TGTTTCGGCAATTAAGATGA+TGG 0.507720 3_2:+83461355 Msa0431390:CDS
GAGATAGAATTGTTCAAGAA+AGG 0.507816 3_2:+83462798 Msa0431390:CDS
CCACCTTTGCATGGGAGAGA+AGG 0.508933 3_2:+83461500 Msa0431390:CDS
AACATCCATGTGAGTAGCTA+TGG 0.509176 3_2:-83461336 None:intergenic
CTATCAGTAACTAGCGAGAA+TGG 0.509678 3_2:+83461635 Msa0431390:CDS
CCTCCATAACATTACAATCT+CGG 0.513116 3_2:-83464617 None:intergenic
TCAAACCGTGCTTTGCAGAA+AGG 0.514004 3_2:+83463990 Msa0431390:CDS
GATTCCCTCTCCCCTTACTA+AGG 0.514122 3_2:-83463934 None:intergenic
TGGAAGTTTCGATCTGTTGT+TGG 0.516745 3_2:+83461051 Msa0431390:five_prime_UTR
ATTTGATATCAGCTCTGCAT+TGG 0.519339 3_2:-83461378 None:intergenic
CCTTCTCTCCCATGCAAAGG+TGG 0.521268 3_2:-83461500 None:intergenic
ATGATATGGTAATTAATACC+TGG 0.524513 3_2:-83460396 None:intergenic
AACAATAGCTACAACGGCAG+TGG 0.527295 3_2:-83462955 None:intergenic
TGGAGGATGGTTGTGGCCAA+AGG 0.529789 3_2:+83464634 Msa0431390:three_prime_UTR
TATTAATCCACTGCAGAAGT+TGG 0.536280 3_2:-83464573 None:intergenic
CTCCATCAAAATCCTTGTCT+AGG 0.538252 3_2:-83461258 None:intergenic
TTTGGAGTCTATGATGGCCA+TGG 0.539364 3_2:+83462115 Msa0431390:CDS
CAGTCGTTCCACCTTTGCAT+GGG 0.541895 3_2:+83461492 Msa0431390:CDS
TGATTCATTATCATTGGAAG+GGG 0.543217 3_2:+83461592 Msa0431390:CDS
CTCAGAGCTGTCCTTAGTAA+GGG 0.543482 3_2:+83463923 Msa0431390:CDS
CTTGCTGTAGCATTGAGCCT+TGG 0.543814 3_2:+83461818 Msa0431390:CDS
TCCCCTTCTCTCCCATGCAA+AGG 0.544084 3_2:-83461503 None:intergenic
CATAATATCTGCCTCCACAT+TGG 0.544925 3_2:-83461786 None:intergenic
AAAAGTTGACGATGAAGTTG+GGG 0.546146 3_2:+83462890 Msa0431390:CDS
AAGATGTAAATCCCCAAAGT+GGG 0.548078 3_2:-83461955 None:intergenic
AAAGATGTAAATCCCCAAAG+TGG 0.550847 3_2:-83461956 None:intergenic
ATGATTCATTATCATTGGAA+GGG 0.552164 3_2:+83461591 Msa0431390:CDS
CAATTGAGAGTTCTAATGAA+AGG 0.552643 3_2:-83464208 None:intergenic
AGGTGGTAGCAATTTGGCAT+TGG 0.552712 3_2:+83464440 Msa0431390:three_prime_UTR
CTGTTTAATATCAGAATGGT+GGG 0.552998 3_2:+83461216 Msa0431390:five_prime_UTR
TAGAGAACAAAGACTCTGCT+AGG 0.553255 3_2:+83464377 Msa0431390:three_prime_UTR
GGAATTTGTCATTTAGTGCA+GGG 0.553445 3_2:-83464185 None:intergenic
TTAATACCTGGGTGGGTGAG+TGG 0.553831 3_2:-83460384 None:intergenic
TATGCAAGAATCGAGGCAGC+TGG 0.554886 3_2:+83463179 Msa0431390:CDS
TAATACCTGGGTGGGTGAGT+GGG 0.556673 3_2:-83460383 None:intergenic
TTGTTGAGAGTTAGAAGCAC+CGG 0.558804 3_2:-83460358 None:intergenic
CTGTCCTTAGTAAGGGGAGA+GGG 0.559997 3_2:+83463930 Msa0431390:CDS
GTTAGAAGCACCGGAAACAA+AGG 0.560387 3_2:-83460349 None:intergenic
TAAATCTCGACAATCATCCT+TGG 0.560624 3_2:-83462838 None:intergenic
TCCATGTGAGTAGCTATGGT+TGG 0.562083 3_2:-83461332 None:intergenic
GATTGTAATGTTATGGAGGA+TGG 0.566032 3_2:+83464621 Msa0431390:three_prime_UTR
GTTGCAGTGCCATTAATAGC+TGG 0.566563 3_2:+83461290 Msa0431390:CDS
CTGCAGTGGATTAATATCAC+TGG 0.567275 3_2:+83464580 Msa0431390:three_prime_UTR
TAACTCCTGTTTCATCTCCA+AGG 0.573591 3_2:-83461835 None:intergenic
TGATATGGTAATTAATACCT+GGG 0.574440 3_2:-83460395 None:intergenic
TGATCCTCAGATAAAGGCAT+CGG 0.574547 3_2:-83463044 None:intergenic
TTAGAAGCACCGGAAACAAA+GGG 0.576318 3_2:-83460348 None:intergenic
ACTGTTTAATATCAGAATGG+TGG 0.576445 3_2:+83461215 Msa0431390:five_prime_UTR
GCTGTCCTTAGTAAGGGGAG+AGG 0.582041 3_2:+83463929 Msa0431390:CDS
ACCAATAAAAGTAGTATCAG+CGG 0.584654 3_2:-83461417 None:intergenic
TCGAGAGCGGTTCTATGTCG+TGG 0.584737 3_2:+83463014 Msa0431390:CDS
AAATGTGGCATATCAAAAGC+AGG 0.585030 3_2:+83464732 Msa0431390:three_prime_UTR
CATTGTACACTGCTGCATTG+GGG 0.585440 3_2:+83464242 Msa0431390:three_prime_UTR
AAGGCTCAATGCTACAGCAA+GGG 0.586983 3_2:-83461816 None:intergenic
TTTAGTCCCAGAAGTTGATG+AGG 0.587162 3_2:+83461568 Msa0431390:CDS
AATTCAATTATCCAAAGCAT+AGG 0.587802 3_2:-83461114 None:intergenic
AACTGTAGTAGGCAACGGTA+CGG 0.588404 3_2:-83461861 None:intergenic
CAAATATGATGGAATGAACA+AGG 0.590150 3_2:+83462066 Msa0431390:CDS
CAAGGCTCAATGCTACAGCA+AGG 0.593101 3_2:-83461817 None:intergenic
ATGGTAATTAATACCTGGGT+GGG 0.594789 3_2:-83460391 None:intergenic
AGGCTCAATGCTACAGCAAG+GGG 0.598186 3_2:-83461815 None:intergenic
AATCGAGGCAGCTGGTGGCA+AGG 0.599028 3_2:+83463187 Msa0431390:CDS
ACCTTTGCATGGGAGAGAAG+GGG 0.600702 3_2:+83461502 Msa0431390:CDS
CAGAGTCTTTGTTCTCTAGG+AGG 0.605322 3_2:-83464372 None:intergenic
ACTGTTTAATGAATTGCACT+TGG 0.606549 3_2:+83464082 Msa0431390:exon
CAATCTCGGATTCAAAGTCA+TGG 0.607115 3_2:-83464603 None:intergenic
GAACGGTCATCGTGTATTTG+GGG 0.608699 3_2:+83463220 Msa0431390:CDS
CTGTTTAATGAATTGCACTT+GGG 0.610280 3_2:+83464083 Msa0431390:three_prime_UTR
AAAGGGGTGAGTGGAACAGT+TGG 0.611140 3_2:+83461905 Msa0431390:CDS
TTGGATTGTACCCCACTTTG+GGG 0.611309 3_2:+83461944 Msa0431390:CDS
AATGTTATGGAGGATGGTTG+TGG 0.612565 3_2:+83464627 Msa0431390:three_prime_UTR
CCGAGATTGTAATGTTATGG+AGG 0.612876 3_2:+83464617 Msa0431390:three_prime_UTR
GACAATCTGGACGACGAAGT+TGG 0.615948 3_2:+83461461 Msa0431390:CDS
AAGTTTCGATCTGTTGTTGG+TGG 0.617708 3_2:+83461054 Msa0431390:five_prime_UTR
TCTAATAATTGGAAGTACCA+AGG 0.617790 3_2:+83462821 Msa0431390:CDS
GAATATACTAGTGTCTGGAA+AGG 0.618012 3_2:+83461004 Msa0431390:five_prime_UTR
TCAGAGCTGTCCTTAGTAAG+GGG 0.625225 3_2:+83463924 Msa0431390:CDS
ATTGAGAGTTCTAATGAAAG+GGG 0.626092 3_2:-83464206 None:intergenic
GCAAGAATCGAGGCAGCTGG+TGG 0.628520 3_2:+83463182 Msa0431390:CDS
GTCTAAGATAAAACTAAAGG+AGG 0.629435 3_2:-83461142 None:intergenic
AGGCATGCGACTTAGCTCGT+AGG 0.630770 3_2:+83463871 Msa0431390:CDS
ATGTGGAAAGAGACCTGAGA+TGG 0.635507 3_2:+83461979 Msa0431390:CDS
CAACACCCACTCACCCACCC+AGG 0.636828 3_2:+83460378 Msa0431390:five_prime_UTR
GGGTGAGTGGAACAGTTGGT+CGG 0.637836 3_2:+83461909 Msa0431390:CDS
GGAGTCTATGATGGCCATGG+TGG 0.638051 3_2:+83462118 Msa0431390:CDS
TCCAACCATAGCTACTCACA+TGG 0.640235 3_2:+83461331 Msa0431390:CDS
ACTTTACCTGAGAGCCACCA+TGG 0.641177 3_2:-83462132 None:intergenic
GTAACTGTTTAATATCAGAA+TGG 0.641889 3_2:+83461212 Msa0431390:five_prime_UTR
AGAACCGATGCCTTTATCTG+AGG 0.645533 3_2:+83463040 Msa0431390:CDS
CCTGTTGCACCAGAAACTGT+TGG 0.648287 3_2:+83462930 Msa0431390:CDS
TTTCGACAAGTCCAATGTGG+AGG 0.649055 3_2:+83461775 Msa0431390:CDS
TAGTTATATGAACAGAAATG+TGG 0.650063 3_2:+83464717 Msa0431390:three_prime_UTR
TGAAGAACTGTAGTAGGCAA+CGG 0.652355 3_2:-83461866 None:intergenic
TGAACAAACAATAGCTACAA+CGG 0.653330 3_2:-83462961 None:intergenic
AAATTGTGGTGATTCGAGAG+CGG 0.664718 3_2:+83463001 Msa0431390:CDS
GGCAAGGTGATACAGTGGAA+CGG 0.665237 3_2:+83463203 Msa0431390:CDS
CTGACTATGAGTCACCGACA+TGG 0.671416 3_2:-83464328 None:intergenic
AAAGTTGACGATGAAGTTGG+GGG 0.677025 3_2:+83462891 Msa0431390:CDS
TGATGAATATGCAAGAATCG+AGG 0.678624 3_2:+83463172 Msa0431390:CDS
CTGGTGGCAAGGTGATACAG+TGG 0.681355 3_2:+83463198 Msa0431390:CDS
GTACTCTGCAGCTGCCTGTG+CGG 0.683375 3_2:-83463964 None:intergenic
AGATGTAAATCCCCAAAGTG+GGG 0.684956 3_2:-83461954 None:intergenic
GGATGTCATGACAAATGAAG+AGG 0.700561 3_2:+83463851 Msa0431390:CDS
ATGCTGTTGCGATTGCACCT+CGG 0.707014 3_2:+83462005 Msa0431390:CDS
TATGGTAATTAATACCTGGG+TGG 0.707968 3_2:-83460392 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATGATATATTATATGATA+TGG - chr3_2:83460413-83460432 None:intergenic 10.0%
!! ATATCATATAATATATCATA+TGG + chr3_2:83460412-83460431 Msa0431390:five_prime_UTR 10.0%
!! TAATAATGTTTAGAAAATTA+AGG + chr3_2:83460482-83460501 Msa0431390:five_prime_UTR 10.0%
!!! TTTTTTGTTAATCAAAATAA+TGG + chr3_2:83460522-83460541 Msa0431390:five_prime_UTR 10.0%
!!! TTTTTGTTAATCAAAATAAT+GGG + chr3_2:83460523-83460542 Msa0431390:five_prime_UTR 10.0%
!!! TATTTTTTTTCATTTATTAG+AGG + chr3_2:83460745-83460764 Msa0431390:intron 10.0%
!!! TGAAGATAATTTGTATTTTA+GGG + chr3_2:83461688-83461707 Msa0431390:CDS 15.0%
!!! TTTATTTTATTTTTAGAGTC+TGG + chr3_2:83462155-83462174 Msa0431390:intron 15.0%
!! TAAATTTGTGTTTATGATAA+GGG + chr3_2:83462532-83462551 Msa0431390:intron 15.0%
!!! ATTGATTTTTGATTTTGATA+TGG + chr3_2:83463135-83463154 Msa0431390:intron 15.0%
!! TTGAAAATACAATTAAAATG+AGG - chr3_2:83463283-83463302 None:intergenic 15.0%
!!! CATTTTAATTGTATTTTCAA+TGG + chr3_2:83463283-83463302 Msa0431390:intron 15.0%
!! TTAGTAATTTATTTAAGCTT+AGG - chr3_2:83463677-83463696 None:intergenic 15.0%
!! GATAAATAAGAAGCAAAATT+AGG + chr3_2:83460587-83460606 Msa0431390:five_prime_UTR 20.0%
!! ACAATTATTCAATGAATGAA+AGG - chr3_2:83460642-83460661 None:intergenic 20.0%
!!! ATTTTGTGTTTAATGAATGT+TGG + chr3_2:83460857-83460876 Msa0431390:intron 20.0%
!!! CTGAAGATAATTTGTATTTT+AGG + chr3_2:83461687-83461706 Msa0431390:CDS 20.0%
!! ATAAGTTAAAAACAAGTCAT+GGG - chr3_2:83462266-83462285 None:intergenic 20.0%
!! AATAAGTTAAAAACAAGTCA+TGG - chr3_2:83462267-83462286 None:intergenic 20.0%
!! AGCATTAAATGCAATAAATA+AGG + chr3_2:83462432-83462451 Msa0431390:intron 20.0%
!! GCATTAAATGCAATAAATAA+GGG + chr3_2:83462433-83462452 Msa0431390:intron 20.0%
!!! CACAAATTTAGAGATTTTTT+TGG - chr3_2:83462522-83462541 None:intergenic 20.0%
!! CTAAATTTGTGTTTATGATA+AGG + chr3_2:83462531-83462550 Msa0431390:intron 20.0%
!!! ACAATTTGAAACAATGATAT+GGG - chr3_2:83462988-83463007 None:intergenic 20.0%
!! TGCATTGTTTATATATTTGA+TGG + chr3_2:83463385-83463404 Msa0431390:intron 20.0%
!! GTTTATATATTTGATGGAAA+TGG + chr3_2:83463391-83463410 Msa0431390:intron 20.0%
!!! ATTTTGAAAATTACTACCTT+TGG + chr3_2:83463427-83463446 Msa0431390:intron 20.0%
!!! CAGAATAGTTTATTTTTATC+AGG + chr3_2:83463518-83463537 Msa0431390:intron 20.0%
! TGATATGGTAATTAATACCT+GGG - chr3_2:83460398-83460417 None:intergenic 25.0%
! ATGATATGGTAATTAATACC+TGG - chr3_2:83460399-83460418 None:intergenic 25.0%
! CATTGAATAATTGTTATCAC+TGG + chr3_2:83460648-83460667 Msa0431390:intron 25.0%
! AAGAAAGAAGGAACAAAAAA+GGG - chr3_2:83460836-83460855 None:intergenic 25.0%
! AAACACAAAATCAAGAAAGA+AGG - chr3_2:83460848-83460867 None:intergenic 25.0%
!! TTGGTCTCTATAATTGTTTT+AGG + chr3_2:83460876-83460895 Msa0431390:intron 25.0%
! AATTCAATTATCCAAAGCAT+AGG - chr3_2:83461117-83461136 None:intergenic 25.0%
!! CATGTCTAAGATAAAACTAA+AGG - chr3_2:83461148-83461167 None:intergenic 25.0%
!!! CTTTAGTTTTATCTTAGACA+TGG + chr3_2:83461146-83461165 Msa0431390:five_prime_UTR 25.0%
! ATGGAATATCTTTACATTCT+CGG + chr3_2:83461165-83461184 Msa0431390:five_prime_UTR 25.0%
! GTAACTGTTTAATATCAGAA+TGG + chr3_2:83461212-83461231 Msa0431390:five_prime_UTR 25.0%
!!! TTTTTTGTATTACCTAGACA+AGG + chr3_2:83461246-83461265 Msa0431390:five_prime_UTR 25.0%
! ATGATTCATTATCATTGGAA+GGG + chr3_2:83461591-83461610 Msa0431390:CDS 25.0%
!! GATAGAGTGCTATAAATAAT+TGG - chr3_2:83461620-83461639 None:intergenic 25.0%
! ATTCCTATTCAAATGCTAAA+TGG + chr3_2:83462037-83462056 Msa0431390:CDS 25.0%
! TTACCATTTAGCATTTGAAT+AGG - chr3_2:83462043-83462062 None:intergenic 25.0%
!!! TTTTATTTTTAGAGTCTGGT+TGG + chr3_2:83462159-83462178 Msa0431390:intron 25.0%
!!! ATTACTTTTGAGTCTGTTTA+AGG + chr3_2:83462213-83462232 Msa0431390:intron 25.0%
!!! TTACTTTTGAGTCTGTTTAA+GGG + chr3_2:83462214-83462233 Msa0431390:intron 25.0%
!!! TGATGTTTTTTGGTTTTTGA+GGG - chr3_2:83462341-83462360 None:intergenic 25.0%
!!! TTGATGTTTTTTGGTTTTTG+AGG - chr3_2:83462342-83462361 None:intergenic 25.0%
!!! GCATTGATTTTGATGTTTTT+TGG - chr3_2:83462351-83462370 None:intergenic 25.0%
! TTTATACAAATATACCCTCA+TGG + chr3_2:83462399-83462418 Msa0431390:intron 25.0%
! AACAAAAAAATGCAAACCAT+TGG - chr3_2:83462696-83462715 None:intergenic 25.0%
!!! AATGGTTTGCATTTTTTTGT+TGG + chr3_2:83462695-83462714 Msa0431390:intron 25.0%
! TTCAAGAAAGGTCTAATAAT+TGG + chr3_2:83462810-83462829 Msa0431390:CDS 25.0%
!! CACAATTTGAAACAATGATA+TGG - chr3_2:83462989-83463008 None:intergenic 25.0%
! CATATCATTGTTTCAAATTG+TGG + chr3_2:83462987-83463006 Msa0431390:CDS 25.0%
! TTTATATCTTACCAATGCAT+TGG + chr3_2:83463561-83463580 Msa0431390:intron 25.0%
!! AATTGAGAGTTCTAATGAAA+GGG - chr3_2:83464210-83464229 None:intergenic 25.0%
! GAGTTTACTTAAAAATTGTG+CGG - chr3_2:83464504-83464523 None:intergenic 25.0%
!!! CTCATATCATTGTGTTTTTT+TGG + chr3_2:83464521-83464540 Msa0431390:three_prime_UTR 25.0%
! TAGTTATATGAACAGAAATG+TGG + chr3_2:83464717-83464736 Msa0431390:three_prime_UTR 25.0%
CAAGAAAGAAGGAACAAAAA+AGG - chr3_2:83460837-83460856 None:intergenic 30.0%
AAGAAGAATATACTAGTGTC+TGG + chr3_2:83460999-83461018 Msa0431390:five_prime_UTR 30.0%
! GTCTAAGATAAAACTAAAGG+AGG - chr3_2:83461145-83461164 None:intergenic 30.0%
ACTGTTTAATATCAGAATGG+TGG + chr3_2:83461215-83461234 Msa0431390:five_prime_UTR 30.0%
CTGTTTAATATCAGAATGGT+GGG + chr3_2:83461216-83461235 Msa0431390:five_prime_UTR 30.0%
ACTGAATTACCAGCTATTAA+TGG - chr3_2:83461302-83461321 None:intergenic 30.0%
ACCAATAAAAGTAGTATCAG+CGG - chr3_2:83461420-83461439 None:intergenic 30.0%
!!! TACTTTTATTGGTTCTGATG+AGG + chr3_2:83461427-83461446 Msa0431390:CDS 30.0%
TGAGGATGATTCATTATCAT+TGG + chr3_2:83461586-83461605 Msa0431390:CDS 30.0%
GATGATTCATTATCATTGGA+AGG + chr3_2:83461590-83461609 Msa0431390:CDS 30.0%
TGATTCATTATCATTGGAAG+GGG + chr3_2:83461592-83461611 Msa0431390:CDS 30.0%
ATCAACTGCCTCTTAAAAAA+GGG + chr3_2:83461888-83461907 Msa0431390:CDS 30.0%
AATGGTAACAGCAAATATGA+TGG + chr3_2:83462055-83462074 Msa0431390:CDS 30.0%
! CAAATATGATGGAATGAACA+AGG + chr3_2:83462066-83462085 Msa0431390:CDS 30.0%
! TGCTTCAAAATTTTCCATGA+GGG - chr3_2:83462416-83462435 None:intergenic 30.0%
! ATGCTTCAAAATTTTCCATG+AGG - chr3_2:83462417-83462436 None:intergenic 30.0%
ATAACAAAAGATACTACCTC+CGG - chr3_2:83462559-83462578 None:intergenic 30.0%
AAAGCAAGCTCAATGTTAAA+AGG - chr3_2:83462723-83462742 None:intergenic 30.0%
!! TGAGCTTGCTTTTCTTTTTT+AGG + chr3_2:83462731-83462750 Msa0431390:intron 30.0%
CAATTCTATCTCCTCAATTA+AGG - chr3_2:83462790-83462809 None:intergenic 30.0%
GAGATAGAATTGTTCAAGAA+AGG + chr3_2:83462798-83462817 Msa0431390:CDS 30.0%
!! TCTAATAATTGGAAGTACCA+AGG + chr3_2:83462821-83462840 Msa0431390:CDS 30.0%
TGAACAAACAATAGCTACAA+CGG - chr3_2:83462964-83462983 None:intergenic 30.0%
ACTTTATGATCCTCAGATAA+AGG - chr3_2:83463053-83463072 None:intergenic 30.0%
TATCCATCTTAGTTTATGAG+TGG + chr3_2:83463341-83463360 Msa0431390:intron 30.0%
TAACCACTCATAAACTAAGA+TGG - chr3_2:83463347-83463366 None:intergenic 30.0%
TTATGAGTGGTTAGAAAATG+TGG + chr3_2:83463354-83463373 Msa0431390:intron 30.0%
TATATAAACAATGCAACCGA+TGG - chr3_2:83463380-83463399 None:intergenic 30.0%
ATATTTGATGGAAATGGTGT+CGG + chr3_2:83463397-83463416 Msa0431390:intron 30.0%
ATGACATGAAAATACTCCAA+AGG - chr3_2:83463446-83463465 None:intergenic 30.0%
!! CTAGCTTTATGGTCATATAA+TGG - chr3_2:83463610-83463629 None:intergenic 30.0%
!! AATTAGGCATTCTAGCTTTA+TGG - chr3_2:83463621-83463640 None:intergenic 30.0%
AGTAAAAAAGACGAGAACAT+TGG - chr3_2:83463651-83463670 None:intergenic 30.0%
TTATCATTGTTGTGACTTTC+AGG + chr3_2:83463726-83463745 Msa0431390:intron 30.0%
!! ATGAATGTAATTTCTGGTTC+GGG - chr3_2:83463780-83463799 None:intergenic 30.0%
!! GATGAATGTAATTTCTGGTT+CGG - chr3_2:83463781-83463800 None:intergenic 30.0%
! AGATGATGAATGTCTCATTT+TGG + chr3_2:83463812-83463831 Msa0431390:CDS 30.0%
ACTGTTTAATGAATTGCACT+TGG + chr3_2:83464082-83464101 Msa0431390:exon 30.0%
CTGTTTAATGAATTGCACTT+GGG + chr3_2:83464083-83464102 Msa0431390:three_prime_UTR 30.0%
GAACTCAATCGATTATAGTT+TGG + chr3_2:83464126-83464145 Msa0431390:three_prime_UTR 30.0%
! ATTGAGAGTTCTAATGAAAG+GGG - chr3_2:83464209-83464228 None:intergenic 30.0%
! CAATTGAGAGTTCTAATGAA+AGG - chr3_2:83464211-83464230 None:intergenic 30.0%
! TTGCTGCTTATTGTAGATAT+AGG + chr3_2:83464281-83464300 Msa0431390:three_prime_UTR 30.0%
ATAAAAAGGTGGTAGCAATT+TGG + chr3_2:83464434-83464453 Msa0431390:three_prime_UTR 30.0%
AATCCGAGATTGTAATGTTA+TGG + chr3_2:83464614-83464633 Msa0431390:three_prime_UTR 30.0%
GTCCATTTACAAAAAACCTT+TGG - chr3_2:83464653-83464672 None:intergenic 30.0%
!!! GTTTTTTGTAAATGGACTTG+TGG + chr3_2:83464656-83464675 Msa0431390:three_prime_UTR 30.0%
ATGGTAATTAATACCTGGGT+GGG - chr3_2:83460394-83460413 None:intergenic 35.0%
TATGGTAATTAATACCTGGG+TGG - chr3_2:83460395-83460414 None:intergenic 35.0%
CTTTCAAGCCTCTATAATTG+AGG + chr3_2:83460963-83460982 Msa0431390:five_prime_UTR 35.0%
CCTATTTGCCTCAATTATAG+AGG - chr3_2:83460974-83460993 None:intergenic 35.0%
CCTCTATAATTGAGGCAAAT+AGG + chr3_2:83460971-83460990 Msa0431390:five_prime_UTR 35.0%
GAATATACTAGTGTCTGGAA+AGG + chr3_2:83461004-83461023 Msa0431390:five_prime_UTR 35.0%
! AAGTTAGATGCGTCGATAAA+TGG + chr3_2:83461031-83461050 Msa0431390:five_prime_UTR 35.0%
! CAAAGCATAGGCTAGTTAAA+AGG - chr3_2:83461105-83461124 None:intergenic 35.0%
!! CTTTTAACTAGCCTATGCTT+TGG + chr3_2:83461103-83461122 Msa0431390:five_prime_UTR 35.0%
! TACCTAGACAAGGATTTTGA+TGG + chr3_2:83461256-83461275 Msa0431390:exon 35.0%
TGTTTCGGCAATTAAGATGA+TGG + chr3_2:83461355-83461374 Msa0431390:CDS 35.0%
ATTTGATATCAGCTCTGCAT+TGG - chr3_2:83461381-83461400 None:intergenic 35.0%
!! TCCGCTGATACTACTTTTAT+TGG + chr3_2:83461416-83461435 Msa0431390:CDS 35.0%
AATCATCCTCATCAACTTCT+GGG - chr3_2:83461577-83461596 None:intergenic 35.0%
TTCTGTCGAAATTGTTGCTA+GGG + chr3_2:83461745-83461764 Msa0431390:CDS 35.0%
!! AGTTGATGAAGAACTGTAGT+AGG - chr3_2:83461875-83461894 None:intergenic 35.0%
CATCAACTGCCTCTTAAAAA+AGG + chr3_2:83461887-83461906 Msa0431390:CDS 35.0%
TCAACTGCCTCTTAAAAAAG+GGG + chr3_2:83461889-83461908 Msa0431390:CDS 35.0%
AAGATGTAAATCCCCAAAGT+GGG - chr3_2:83461958-83461977 None:intergenic 35.0%
AAAGATGTAAATCCCCAAAG+TGG - chr3_2:83461959-83461978 None:intergenic 35.0%
TGGGGATTTACATCTTTATG+TGG + chr3_2:83461962-83461981 Msa0431390:CDS 35.0%
! ATAGGAATTTTCAACATCCG+AGG - chr3_2:83462025-83462044 None:intergenic 35.0%
GAGCAGACAATTCATTTCTT+TGG + chr3_2:83462097-83462116 Msa0431390:CDS 35.0%
!! CATTTCTTTGGAGTCTATGA+TGG + chr3_2:83462109-83462128 Msa0431390:CDS 35.0%
!!! TTTTTAGAGTCTGGTTGGAT+TGG + chr3_2:83462164-83462183 Msa0431390:intron 35.0%
GCAATAAATAAGGGAGAGAA+AGG + chr3_2:83462442-83462461 Msa0431390:intron 35.0%
TTGTGTTTATGATAAGGGAC+CGG + chr3_2:83462537-83462556 Msa0431390:intron 35.0%
ATGCAAACCATTGGATACAA+GGG - chr3_2:83462687-83462706 None:intergenic 35.0%
AATGCAAACCATTGGATACA+AGG - chr3_2:83462688-83462707 None:intergenic 35.0%
!! TATGCATTTGGCCTTAATTG+AGG + chr3_2:83462776-83462795 Msa0431390:CDS 35.0%
TAAATCTCGACAATCATCCT+TGG - chr3_2:83462841-83462860 None:intergenic 35.0%
AGGATGATTGTCGAGATTTA+TGG + chr3_2:83462841-83462860 Msa0431390:CDS 35.0%
TCAAAAGTTGACGATGAAGT+TGG + chr3_2:83462888-83462907 Msa0431390:CDS 35.0%
CAAAAGTTGACGATGAAGTT+GGG + chr3_2:83462889-83462908 Msa0431390:CDS 35.0%
AAAAGTTGACGATGAAGTTG+GGG + chr3_2:83462890-83462909 Msa0431390:CDS 35.0%
ACGTGCAAAACTATTACTGA+AGG - chr3_2:83463082-83463101 None:intergenic 35.0%
GCATATTCATCATCTCGATT+TGG - chr3_2:83463164-83463183 None:intergenic 35.0%
TGATGAATATGCAAGAATCG+AGG + chr3_2:83463172-83463191 Msa0431390:CDS 35.0%
TTTCAATGGCGATAGTTACA+AGG + chr3_2:83463297-83463316 Msa0431390:intron 35.0%
TATAAGCTAAGCCAATGCAT+TGG - chr3_2:83463575-83463594 None:intergenic 35.0%
GAACATTGGAAGTCACAATT+AGG - chr3_2:83463637-83463656 None:intergenic 35.0%
CTTCTTTGGCACAAGAAAAA+TGG + chr3_2:83463900-83463919 Msa0431390:CDS 35.0%
! TGGCTCAGTAATTTTTCATC+TGG + chr3_2:83464146-83464165 Msa0431390:three_prime_UTR 35.0%
! GGCTCAGTAATTTTTCATCT+GGG + chr3_2:83464147-83464166 Msa0431390:three_prime_UTR 35.0%
! TAATTTTTCATCTGGGCACA+TGG + chr3_2:83464154-83464173 Msa0431390:three_prime_UTR 35.0%
! GGAATTTGTCATTTAGTGCA+GGG - chr3_2:83464188-83464207 None:intergenic 35.0%
!! CGTCTGTGCTGTTTATAAAA+AGG + chr3_2:83464420-83464439 Msa0431390:three_prime_UTR 35.0%
!! CTGTGCTGTTTATAAAAAGG+TGG + chr3_2:83464423-83464442 Msa0431390:three_prime_UTR 35.0%
TATTAATCCACTGCAGAAGT+TGG - chr3_2:83464576-83464595 None:intergenic 35.0%
CCTCCATAACATTACAATCT+CGG - chr3_2:83464620-83464639 None:intergenic 35.0%
GATTGTAATGTTATGGAGGA+TGG + chr3_2:83464621-83464640 Msa0431390:three_prime_UTR 35.0%
!!! GGCCAAAGGTTTTTTGTAAA+TGG + chr3_2:83464648-83464667 Msa0431390:three_prime_UTR 35.0%
! AATGGACTTGTGGTTATTGT+TGG + chr3_2:83464666-83464685 Msa0431390:three_prime_UTR 35.0%
AAATGTGGCATATCAAAAGC+AGG + chr3_2:83464732-83464751 Msa0431390:three_prime_UTR 35.0%
!! TTAGAAGCACCGGAAACAAA+GGG - chr3_2:83460351-83460370 None:intergenic 40.0%
! TTGTTGAGAGTTAGAAGCAC+CGG - chr3_2:83460361-83460380 None:intergenic 40.0%
!! CAAAATAATGGGTCTCAGTC+AGG + chr3_2:83460534-83460553 Msa0431390:five_prime_UTR 40.0%
ATATGTGTTACCTCAGATCC+AGG + chr3_2:83460680-83460699 Msa0431390:intron 40.0%
TCCTGAGACTTTACTTCTTC+TGG + chr3_2:83460795-83460814 Msa0431390:intron 40.0%
TCCAGAAGAAGTAAAGTCTC+AGG - chr3_2:83460799-83460818 None:intergenic 40.0%
TGGAAGTTTCGATCTGTTGT+TGG + chr3_2:83461051-83461070 Msa0431390:five_prime_UTR 40.0%
AAGTTTCGATCTGTTGTTGG+TGG + chr3_2:83461054-83461073 Msa0431390:five_prime_UTR 40.0%
CTCCATCAAAATCCTTGTCT+AGG - chr3_2:83461261-83461280 None:intergenic 40.0%
!! CTAGACAAGGATTTTGATGG+AGG + chr3_2:83461259-83461278 Msa0431390:exon 40.0%
AACATCCATGTGAGTAGCTA+TGG - chr3_2:83461339-83461358 None:intergenic 40.0%
AGCTACTCACATGGATGTTT+CGG + chr3_2:83461340-83461359 Msa0431390:CDS 40.0%
! GGTTCTGATGAGGATCATAT+TGG + chr3_2:83461437-83461456 Msa0431390:CDS 40.0%
! GGATCATATTGGTGACAATC+TGG + chr3_2:83461448-83461467 Msa0431390:CDS 40.0%
!! TTTAGTCCCAGAAGTTGATG+AGG + chr3_2:83461568-83461587 Msa0431390:CDS 40.0%
GAATCATCCTCATCAACTTC+TGG - chr3_2:83461578-83461597 None:intergenic 40.0%
CTATCAGTAACTAGCGAGAA+TGG + chr3_2:83461635-83461654 Msa0431390:CDS 40.0%
!!! TTTTAGGGCAAAGAGTTCGA+TGG + chr3_2:83461703-83461722 Msa0431390:CDS 40.0%
CTTCTGTCGAAATTGTTGCT+AGG + chr3_2:83461744-83461763 Msa0431390:CDS 40.0%
! TGTTTTCGACAAGTCCAATG+TGG + chr3_2:83461772-83461791 Msa0431390:CDS 40.0%
CATAATATCTGCCTCCACAT+TGG - chr3_2:83461789-83461808 None:intergenic 40.0%
TAACTCCTGTTTCATCTCCA+AGG - chr3_2:83461838-83461857 None:intergenic 40.0%
TGAAGAACTGTAGTAGGCAA+CGG - chr3_2:83461869-83461888 None:intergenic 40.0%
!! TGGTCGGAGTGTTTTTGAAT+TGG + chr3_2:83461925-83461944 Msa0431390:CDS 40.0%
AATTGGATTGTACCCCACTT+TGG + chr3_2:83461942-83461961 Msa0431390:CDS 40.0%
ATTGGATTGTACCCCACTTT+GGG + chr3_2:83461943-83461962 Msa0431390:CDS 40.0%
AGATGTAAATCCCCAAAGTG+GGG - chr3_2:83461957-83461976 None:intergenic 40.0%
!! TTGGCTTGTTTGAGCTTATC+TGG + chr3_2:83462183-83462202 Msa0431390:intron 40.0%
CTTATTTCCACAAGCTCTGT+TGG + chr3_2:83462281-83462300 Msa0431390:intron 40.0%
AAGCTCTGTTGGATTGCTTA+TGG + chr3_2:83462292-83462311 Msa0431390:intron 40.0%
TTGTCGAGATCGTATGCATT+TGG + chr3_2:83462764-83462783 Msa0431390:CDS 40.0%
AAAGTTGACGATGAAGTTGG+GGG + chr3_2:83462891-83462910 Msa0431390:CDS 40.0%
GAAGTTGGGGGAAAAGTTAA+CGG + chr3_2:83462903-83462922 Msa0431390:CDS 40.0%
AAATTGTGGTGATTCGAGAG+CGG + chr3_2:83463001-83463020 Msa0431390:CDS 40.0%
! TGATCCTCAGATAAAGGCAT+CGG - chr3_2:83463047-83463066 None:intergenic 40.0%
CTTGCAATGTCAAGGTCTAT+TGG + chr3_2:83463245-83463264 Msa0431390:CDS 40.0%
TGGTTAGAAAATGTGGCCAT+CGG + chr3_2:83463361-83463380 Msa0431390:intron 40.0%
!! TCTGGTTCGGGAATAATTGA+TGG - chr3_2:83463768-83463787 None:intergenic 40.0%
CGAGGGATGAATGTAATTTC+TGG - chr3_2:83463786-83463805 None:intergenic 40.0%
! ATTCATCATCTTTTGCGCGA+GGG - chr3_2:83463803-83463822 None:intergenic 40.0%
!!! TGTCTCATTTTGGCTAGTGA+TGG + chr3_2:83463822-83463841 Msa0431390:CDS 40.0%
GGATGTCATGACAAATGAAG+AGG + chr3_2:83463851-83463870 Msa0431390:CDS 40.0%
! GGGAATTTGTCATTTAGTGC+AGG - chr3_2:83464189-83464208 None:intergenic 40.0%
TTCATTGTACACTGCTGCAT+TGG + chr3_2:83464240-83464259 Msa0431390:three_prime_UTR 40.0%
TCATTGTACACTGCTGCATT+GGG + chr3_2:83464241-83464260 Msa0431390:three_prime_UTR 40.0%
! TTTTACATGTGTCGCCATGT+CGG + chr3_2:83464314-83464333 Msa0431390:three_prime_UTR 40.0%
TAGCAGAGTCTTTGTTCTCT+AGG - chr3_2:83464378-83464397 None:intergenic 40.0%
TAGAGAACAAAGACTCTGCT+AGG + chr3_2:83464377-83464396 Msa0431390:three_prime_UTR 40.0%
!! CTGCAGTGGATTAATATCAC+TGG + chr3_2:83464580-83464599 Msa0431390:three_prime_UTR 40.0%
CAATCTCGGATTCAAAGTCA+TGG - chr3_2:83464606-83464625 None:intergenic 40.0%
CCGAGATTGTAATGTTATGG+AGG + chr3_2:83464617-83464636 Msa0431390:three_prime_UTR 40.0%
AATGTTATGGAGGATGGTTG+TGG + chr3_2:83464627-83464646 Msa0431390:three_prime_UTR 40.0%
AAGTCACTCTCAGAACTTAG+TGG - chr3_2:83464696-83464715 None:intergenic 40.0%
!! GTTAGAAGCACCGGAAACAA+AGG - chr3_2:83460352-83460371 None:intergenic 45.0%
TTACCTCAGATCCAGGTAAC+TGG + chr3_2:83460687-83460706 Msa0431390:intron 45.0%
ACATAAGACCACCAGTTACC+TGG - chr3_2:83460701-83460720 None:intergenic 45.0%
! GTTGCAGTGCCATTAATAGC+TGG + chr3_2:83461290-83461309 Msa0431390:CDS 45.0%
TCCAACCATAGCTACTCACA+TGG + chr3_2:83461331-83461350 Msa0431390:CDS 45.0%
TCCATGTGAGTAGCTATGGT+TGG - chr3_2:83461335-83461354 None:intergenic 45.0%
! AGCGAGAATGGTAGTGTTTG+TGG + chr3_2:83461647-83461666 Msa0431390:CDS 45.0%
TTTCGACAAGTCCAATGTGG+AGG + chr3_2:83461775-83461794 Msa0431390:CDS 45.0%
AAGGCTCAATGCTACAGCAA+GGG - chr3_2:83461819-83461838 None:intergenic 45.0%
TTGAGCCTTGGAGATGAAAC+AGG + chr3_2:83461830-83461849 Msa0431390:CDS 45.0%
AACTGTAGTAGGCAACGGTA+CGG - chr3_2:83461864-83461883 None:intergenic 45.0%
!!! CCACTCACCCCTTTTTTAAG+AGG - chr3_2:83461899-83461918 None:intergenic 45.0%
CCTCTTAAAAAAGGGGTGAG+TGG + chr3_2:83461896-83461915 Msa0431390:CDS 45.0%
TTGGATTGTACCCCACTTTG+GGG + chr3_2:83461944-83461963 Msa0431390:CDS 45.0%
ATGTGGAAAGAGACCTGAGA+TGG + chr3_2:83461979-83461998 Msa0431390:CDS 45.0%
! TTTGGAGTCTATGATGGCCA+TGG + chr3_2:83462115-83462134 Msa0431390:CDS 45.0%
AAGCAATCCAACAGAGCTTG+TGG - chr3_2:83462291-83462310 None:intergenic 45.0%
TGTTTATGATAAGGGACCGG+AGG + chr3_2:83462540-83462559 Msa0431390:intron 45.0%
CATGTGACCCTTGTATCCAA+TGG + chr3_2:83462677-83462696 Msa0431390:intron 45.0%
AACAATAGCTACAACGGCAG+TGG - chr3_2:83462958-83462977 None:intergenic 45.0%
AGAACCGATGCCTTTATCTG+AGG + chr3_2:83463040-83463059 Msa0431390:CDS 45.0%
TGGAACGGTCATCGTGTATT+TGG + chr3_2:83463218-83463237 Msa0431390:CDS 45.0%
GGAACGGTCATCGTGTATTT+GGG + chr3_2:83463219-83463238 Msa0431390:CDS 45.0%
GAACGGTCATCGTGTATTTG+GGG + chr3_2:83463220-83463239 Msa0431390:CDS 45.0%
TTGGGGTTCTTGCAATGTCA+AGG + chr3_2:83463237-83463256 Msa0431390:CDS 45.0%
! CATTCATCATCTTTTGCGCG+AGG - chr3_2:83463804-83463823 None:intergenic 45.0%
!! TTTTGGCTAGTGATGGCTTG+TGG + chr3_2:83463829-83463848 Msa0431390:CDS 45.0%
! TTTGGCTAGTGATGGCTTGT+GGG + chr3_2:83463830-83463849 Msa0431390:CDS 45.0%
CTCAGAGCTGTCCTTAGTAA+GGG + chr3_2:83463923-83463942 Msa0431390:CDS 45.0%
TCAGAGCTGTCCTTAGTAAG+GGG + chr3_2:83463924-83463943 Msa0431390:CDS 45.0%
TCTGCAAAGCACGGTTTGAT+AGG - chr3_2:83463989-83464008 None:intergenic 45.0%
TCAAACCGTGCTTTGCAGAA+AGG + chr3_2:83463990-83464009 Msa0431390:CDS 45.0%
TGCTTCCTTTCTGCAAAGCA+CGG - chr3_2:83463998-83464017 None:intergenic 45.0%
CATTGTACACTGCTGCATTG+GGG + chr3_2:83464242-83464261 Msa0431390:three_prime_UTR 45.0%
GACATGGCGACACATGTAAA+AGG - chr3_2:83464315-83464334 None:intergenic 45.0%
CAGAGTCTTTGTTCTCTAGG+AGG - chr3_2:83464375-83464394 None:intergenic 45.0%
AGGTGGTAGCAATTTGGCAT+TGG + chr3_2:83464440-83464459 Msa0431390:three_prime_UTR 45.0%
!! GTTTTAGCCAACTTCTGCAG+TGG + chr3_2:83464566-83464585 Msa0431390:three_prime_UTR 45.0%
TAATACCTGGGTGGGTGAGT+GGG - chr3_2:83460386-83460405 None:intergenic 50.0%
TTAATACCTGGGTGGGTGAG+TGG - chr3_2:83460387-83460406 None:intergenic 50.0%
GACAATCTGGACGACGAAGT+TGG + chr3_2:83461461-83461480 Msa0431390:CDS 50.0%
CAGTCGTTCCACCTTTGCAT+GGG + chr3_2:83461492-83461511 Msa0431390:CDS 50.0%
CACCTTTGCATGGGAGAGAA+GGG + chr3_2:83461501-83461520 Msa0431390:CDS 50.0%
ACCTTTGCATGGGAGAGAAG+GGG + chr3_2:83461502-83461521 Msa0431390:CDS 50.0%
AGGCTCAATGCTACAGCAAG+GGG - chr3_2:83461818-83461837 None:intergenic 50.0%
CAAGGCTCAATGCTACAGCA+AGG - chr3_2:83461820-83461839 None:intergenic 50.0%
! CTTGCTGTAGCATTGAGCCT+TGG + chr3_2:83461818-83461837 Msa0431390:CDS 50.0%
AAAGGGGTGAGTGGAACAGT+TGG + chr3_2:83461905-83461924 Msa0431390:CDS 50.0%
GCAACAGCATCTTCCATCTC+AGG - chr3_2:83461995-83462014 None:intergenic 50.0%
ATGCTGTTGCGATTGCACCT+CGG + chr3_2:83462005-83462024 Msa0431390:CDS 50.0%
ACTTTACCTGAGAGCCACCA+TGG - chr3_2:83462135-83462154 None:intergenic 50.0%
!! CCAACAGTTTCTGGTGCAAC+AGG - chr3_2:83462933-83462952 None:intergenic 50.0%
CCTGTTGCACCAGAAACTGT+TGG + chr3_2:83462930-83462949 Msa0431390:CDS 50.0%
GCAGTGGAACCAACAGTTTC+TGG - chr3_2:83462942-83462961 None:intergenic 50.0%
TATGCAAGAATCGAGGCAGC+TGG + chr3_2:83463179-83463198 Msa0431390:CDS 50.0%
GGCAAGGTGATACAGTGGAA+CGG + chr3_2:83463203-83463222 Msa0431390:CDS 50.0%
CTCGTAGGCGCATACTTCTT+TGG + chr3_2:83463886-83463905 Msa0431390:CDS 50.0%
GCTCAGAGCTGTCCTTAGTA+AGG + chr3_2:83463922-83463941 Msa0431390:CDS 50.0%
CTGTCCTTAGTAAGGGGAGA+GGG + chr3_2:83463930-83463949 Msa0431390:CDS 50.0%
GATTCCCTCTCCCCTTACTA+AGG - chr3_2:83463937-83463956 None:intergenic 50.0%
CTGACTATGAGTCACCGACA+TGG - chr3_2:83464331-83464350 None:intergenic 50.0%
CCACCAGTTACCTGGATCTG+AGG - chr3_2:83460693-83460712 None:intergenic 55.0%
CCTCAGATCCAGGTAACTGG+TGG + chr3_2:83460690-83460709 Msa0431390:intron 55.0%
GCAGTCGTTCCACCTTTGCA+TGG + chr3_2:83461491-83461510 Msa0431390:CDS 55.0%
CCTTCTCTCCCATGCAAAGG+TGG - chr3_2:83461503-83461522 None:intergenic 55.0%
CCACCTTTGCATGGGAGAGA+AGG + chr3_2:83461500-83461519 Msa0431390:CDS 55.0%
TCCCCTTCTCTCCCATGCAA+AGG - chr3_2:83461506-83461525 None:intergenic 55.0%
GGGTGAGTGGAACAGTTGGT+CGG + chr3_2:83461909-83461928 Msa0431390:CDS 55.0%
GGAGTCTATGATGGCCATGG+TGG + chr3_2:83462118-83462137 Msa0431390:CDS 55.0%
TCGAGAGCGGTTCTATGTCG+TGG + chr3_2:83463014-83463033 Msa0431390:CDS 55.0%
CTGGTGGCAAGGTGATACAG+TGG + chr3_2:83463198-83463217 Msa0431390:CDS 55.0%
AGGCATGCGACTTAGCTCGT+AGG + chr3_2:83463871-83463890 Msa0431390:CDS 55.0%
GCTGTCCTTAGTAAGGGGAG+AGG + chr3_2:83463929-83463948 Msa0431390:CDS 55.0%
TGGAGGATGGTTGTGGCCAA+AGG + chr3_2:83464634-83464653 Msa0431390:three_prime_UTR 55.0%
TGATGGCCATGGTGGCTCTC+AGG + chr3_2:83462126-83462145 Msa0431390:CDS 60.0%
GCAAGAATCGAGGCAGCTGG+TGG + chr3_2:83463182-83463201 Msa0431390:CDS 60.0%
AATCGAGGCAGCTGGTGGCA+AGG + chr3_2:83463187-83463206 Msa0431390:CDS 60.0%
GGGAATCGATCTTGCCGCAC+AGG + chr3_2:83463950-83463969 Msa0431390:CDS 60.0%
GTACTCTGCAGCTGCCTGTG+CGG - chr3_2:83463967-83463986 None:intergenic 60.0%
CAACACCCACTCACCCACCC+AGG + chr3_2:83460378-83460397 Msa0431390:five_prime_UTR 65.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 83460345 83464764 83460345 ID=Msa0431390;Name=Msa0431390
chr3_2 mRNA 83460345 83464764 83460345 ID=Msa0431390-mRNA-1;Parent=Msa0431390;Name=Msa0431390-mRNA-1;_AED=0.02;_eAED=0.02;_QI=604|1|1|1|0.75|0.6|5|682|543
chr3_2 exon 83460345 83460608 83460345 ID=Msa0431390-mRNA-1:exon:23283;Parent=Msa0431390-mRNA-1
chr3_2 exon 83460935 83462147 83460935 ID=Msa0431390-mRNA-1:exon:23284;Parent=Msa0431390-mRNA-1
chr3_2 exon 83462753 83463070 83462753 ID=Msa0431390-mRNA-1:exon:23285;Parent=Msa0431390-mRNA-1
chr3_2 exon 83463161 83463266 83463161 ID=Msa0431390-mRNA-1:exon:23286;Parent=Msa0431390-mRNA-1
chr3_2 exon 83463748 83464764 83463748 ID=Msa0431390-mRNA-1:exon:23287;Parent=Msa0431390-mRNA-1
chr3_2 five_prime_UTR 83460345 83460608 83460345 ID=Msa0431390-mRNA-1:five_prime_utr;Parent=Msa0431390-mRNA-1
chr3_2 five_prime_UTR 83460935 83461274 83460935 ID=Msa0431390-mRNA-1:five_prime_utr;Parent=Msa0431390-mRNA-1
chr3_2 CDS 83461275 83462147 83461275 ID=Msa0431390-mRNA-1:cds;Parent=Msa0431390-mRNA-1
chr3_2 CDS 83462753 83463070 83462753 ID=Msa0431390-mRNA-1:cds;Parent=Msa0431390-mRNA-1
chr3_2 CDS 83463161 83463266 83463161 ID=Msa0431390-mRNA-1:cds;Parent=Msa0431390-mRNA-1
chr3_2 CDS 83463748 83464082 83463748 ID=Msa0431390-mRNA-1:cds;Parent=Msa0431390-mRNA-1
chr3_2 three_prime_UTR 83464083 83464764 83464083 ID=Msa0431390-mRNA-1:three_prime_utr;Parent=Msa0431390-mRNA-1
Gene Sequence

>Msa0431390

ATGGAGGAAATGTCAGTTGCAGTGCCATTAATAGCTGGTAATTCAGTGTGTGATAATCCAACCATAGCTACTCACATGGATGTTTCGGCAATTAAGATGATGGCCAATGCAGAGCTGATATCAAATGCTATAACTACGATATCCGCTGATACTACTTTTATTGGTTCTGATGAGGATCATATTGGTGACAATCTGGACGACGAAGTTGGTGTTTCAGCAGTCGTTCCACCTTTGCATGGGAGAGAAGGGGAAATTCTTTTGTTGAATATGATATCTCAAAGTAGCGATGAACTTTTAGTCCCAGAAGTTGATGAGGATGATTCATTATCATTGGAAGGGGATCCAATTATTTATAGCACTCTATCAGTAACTAGCGAGAATGGTAGTGTTTGTGGAGATGAATTCTTCAGCGCTGAAGATAATTTGTATTTTAGGGCAAAGAGTTCGATGGACATAGATAAGAACATATCTTCTGTCGAAATTGTTGCTAGGGCTGCTGTTTTCGACAAGTCCAATGTGGAGGCAGATATTATGAGTGAACCCCTTGCTGTAGCATTGAGCCTTGGAGATGAAACAGGAGTTAGATCCGTACCGTTGCCTACTACAGTTCTTCATCAACTGCCTCTTAAAAAAGGGGTGAGTGGAACAGTTGGTCGGAGTGTTTTTGAATTGGATTGTACCCCACTTTGGGGATTTACATCTTTATGTGGAAAGAGACCTGAGATGGAAGATGCTGTTGCGATTGCACCTCGGATGTTGAAAATTCCTATTCAAATGCTAAATGGTAACAGCAAATATGATGGAATGAACAAGGATTTTAGTGAGCAGACAATTCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTTGCAAATTATTGTCGAGATCGTATGCATTTGGCCTTAATTGAGGAGATAGAATTGTTCAAGAAAGGTCTAATAATTGGAAGTACCAAGGATGATTGTCGAGATTTATGGAAAAAAGCTTTCACTAATTGTTTTTCAAAAGTTGACGATGAAGTTGGGGGAAAAGTTAACGGTGATCCTGTTGCACCAGAAACTGTTGGTTCCACTGCCGTTGTAGCTATTGTTTGTTCATCCCATATCATTGTTTCAAATTGTGGTGATTCGAGAGCGGTTCTATGTCGTGGAAAAGAACCGATGCCTTTATCTGAGGATCATAAACCAAATCGAGATGATGAATATGCAAGAATCGAGGCAGCTGGTGGCAAGGTGATACAGTGGAACGGTCATCGTGTATTTGGGGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATCAATTATTCCCGAACCAGAAATTACATTCATCCCTCGCGCAAAAGATGATGAATGTCTCATTTTGGCTAGTGATGGCTTGTGGGATGTCATGACAAATGAAGAGGCATGCGACTTAGCTCGTAGGCGCATACTTCTTTGGCACAAGAAAAATGGCTCAGAGCTGTCCTTAGTAAGGGGAGAGGGAATCGATCTTGCCGCACAGGCAGCTGCAGAGTACCTATCAAACCGTGCTTTGCAGAAAGGAAGCAAAGATAACATCACTGTCGTCGTAGTAGATTTGAAAGCTCAGCGAAAATTTAAGACTAAAACATGA
Protein sequence

>Msa0431390

MEEMSVAVPLIAGNSVCDNPTIATHMDVSAIKMMANAELISNAITTISADTTFIGSDEDHIGDNLDDEVGVSAVVPPLHGREGEILLLNMISQSSDELLVPEVDEDDSLSLEGDPIIYSTLSVTSENGSVCGDEFFSAEDNLYFRAKSSMDIDKNISSVEIVARAAVFDKSNVEADIMSEPLAVALSLGDETGVRSVPLPTTVLHQLPLKKGVSGTVGRSVFELDCTPLWGFTSLCGKRPEMEDAVAIAPRMLKIPIQMLNGNSKYDGMNKDFSEQTIHFFGVYDGHGGSQVANYCRDRMHLALIEEIELFKKGLIIGSTKDDCRDLWKKAFTNCFSKVDDEVGGKVNGDPVAPETVGSTAVVAIVCSSHIIVSNCGDSRAVLCRGKEPMPLSEDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPSIIPEPEITFIPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSLVRGEGIDLAAQAAAEYLSNRALQKGSKDNITVVVVDLKAQRKFKTKT*