Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478450 | XP_039688083.1 | 95.706 | 489 | 20 | 1 | 1 | 489 | 1 | 488 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478450 | sp|Q4PJX1|ODR4_MOUSE | 26.420 | 405 | 214 | 17 | 26 | 402 | 24 | 372 | 2.69e-21 | 99.8 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478450 | A0A396J263 | 95.706 | 489 | 20 | 1 | 1 | 489 | 1 | 488 | 0.0 | 935 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0042980 | Msa0478450 | 0.814369 | 1.595990e-51 | -8.615850e-47 |
| Msa0381600 | Msa0478450 | 0.801343 | 9.415038e-49 | -8.615850e-47 |
| Msa0478450 | Msa0522560 | 0.859339 | 4.429683e-63 | -8.615850e-47 |
| Msa0478450 | Msa0532810 | 0.822782 | 1.970467e-53 | -8.615850e-47 |
| Msa0478450 | Msa0825240 | 0.804513 | 2.083381e-49 | -8.615850e-47 |
| Msa0478450 | Msa0864470 | 0.825320 | 4.999154e-54 | -8.615850e-47 |
| Msa0478450 | Msa0876850 | 0.801479 | 8.829960e-49 | -8.615850e-47 |
| Msa0478450 | Msa0946690 | 0.806322 | 8.701334e-50 | -8.615850e-47 |
| Msa0478450 | Msa0972090 | 0.816672 | 4.900785e-52 | -8.615850e-47 |
| Msa0478450 | Msa1364330 | 0.817221 | 3.689484e-52 | -8.615850e-47 |
| Msa0478450 | Msa1404240 | 0.817521 | 3.158527e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478450 | MtrunA17_Chr3g0141121 | 95.706 | 489 | 20 | 1 | 1 | 489 | 1 | 488 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0478450 | AT3G28670.3 | 51.324 | 491 | 230 | 7 | 1 | 485 | 1 | 488 | 4.61e-166 | 478 |
| Msa0478450 | AT3G28670.1 | 51.324 | 491 | 230 | 7 | 1 | 485 | 1 | 488 | 4.61e-166 | 478 |
| Msa0478450 | AT3G28670.2 | 51.324 | 491 | 230 | 7 | 1 | 485 | 52 | 539 | 2.86e-165 | 478 |
Find 135 sgRNAs with CRISPR-Local
Find 436 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGATATCTCTACAATTT+TGG | 0.135918 | 3_3:-83181110 | Msa0478450:CDS |
| CGCCGGCTTCGGAGGTTAAC+TGG | 0.184746 | 3_3:-83186020 | Msa0478450:CDS |
| GTTATCAAAGCCTGCCGTTT+TGG | 0.244572 | 3_3:+83180796 | None:intergenic |
| CTCTCTTCATCGACAATGAT+TGG | 0.265093 | 3_3:-83186514 | Msa0478450:CDS |
| GGATGAACCATCATGCAATA+TGG | 0.270961 | 3_3:+83185619 | None:intergenic |
| AGCCCTGATCGACGGTAAAT+TGG | 0.287820 | 3_3:-83185525 | Msa0478450:intron |
| GTATGCACAACTTTAATCTT+AGG | 0.297210 | 3_3:-83185742 | Msa0478450:intron |
| TCAGTGACAACTTGTGAAAT+TGG | 0.314503 | 3_3:+83182885 | None:intergenic |
| ACAAGTTGTCACTGATATAA+AGG | 0.321637 | 3_3:-83182877 | Msa0478450:intron |
| CTACTTCTGCAAATTTGTTA+TGG | 0.324976 | 3_3:-83185988 | Msa0478450:CDS |
| GATATCAGTTGGAGCTTTCA+TGG | 0.325150 | 3_3:+83181123 | None:intergenic |
| ATCGGGTTGAGTTTGAGATT+TGG | 0.327844 | 3_3:+83186544 | None:intergenic |
| GTTTCATCTTGTCTTCTTTG+AGG | 0.329321 | 3_3:+83181011 | None:intergenic |
| TGCTGAAGCAGCGCCGGCTT+CGG | 0.338988 | 3_3:-83186031 | Msa0478450:CDS |
| GATAAACCCCTCAACCTTTA+CGG | 0.340743 | 3_3:+83180873 | None:intergenic |
| GTTTCTGGTATTCTTTCCTT+TGG | 0.350143 | 3_3:-83182948 | Msa0478450:CDS |
| TTATATCCAGTCGACTTTGC+AGG | 0.359236 | 3_3:+83182610 | None:intergenic |
| TACTACCTGGCAAAGCATTA+AGG | 0.359896 | 3_3:+83186391 | None:intergenic |
| AGCTGGAGGAGGAGAAGATT+TGG | 0.360328 | 3_3:+83186706 | None:intergenic |
| CACTAATGTGACCTGGCTTC+AGG | 0.363655 | 3_3:+83180954 | None:intergenic |
| TGCAGCACAAGTTGGGAAAC+AGG | 0.373016 | 3_3:+83182504 | None:intergenic |
| GTCGGTGGCATTAAGGTTGT+TGG | 0.377228 | 3_3:-83186455 | Msa0478450:CDS |
| TACAGCCAAAGAGATGTTTC+TGG | 0.381078 | 3_3:-83182963 | Msa0478450:CDS |
| TTTGAGGTGAATTTCTGAAT+AGG | 0.384772 | 3_3:+83181027 | None:intergenic |
| TTGAATGATAGTTCTATTGA+AGG | 0.388367 | 3_3:-83183133 | Msa0478450:intron |
| GATGAGACAGATGTTGATTC+AGG | 0.394619 | 3_3:-83182582 | Msa0478450:CDS |
| TTACCAATTTACCGTCGATC+AGG | 0.395145 | 3_3:+83185522 | None:intergenic |
| GAAGACAAGATGAAACTTGA+TGG | 0.400681 | 3_3:-83181004 | Msa0478450:CDS |
| CTTCTACTATCCGTCTTAGT+TGG | 0.400882 | 3_3:-83180911 | Msa0478450:CDS |
| TCTCTTCATCGACAATGATT+GGG | 0.403324 | 3_3:-83186513 | Msa0478450:CDS |
| AGCGGGTTCAGCGGAATCAT+TGG | 0.410520 | 3_3:+83186607 | None:intergenic |
| TTGAGTTTGAGATTTGGATT+TGG | 0.410944 | 3_3:+83186550 | None:intergenic |
| GCGTTTCTTCTGCTTGTTGA+GGG | 0.417626 | 3_3:+83186790 | None:intergenic |
| AATGAGCCATGCTCGTTAGA+AGG | 0.422050 | 3_3:-83183187 | Msa0478450:CDS |
| TTTCTTATCGGGCTGGATGA+TGG | 0.424455 | 3_3:+83186580 | None:intergenic |
| TTATTTGCCCGTAAAGGTTG+AGG | 0.425283 | 3_3:-83180881 | Msa0478450:exon |
| AGGATTTGAGTTACCTTCTC+GGG | 0.429096 | 3_3:+83185965 | None:intergenic |
| GCGGGTTCAGCGGAATCATT+GGG | 0.429226 | 3_3:+83186608 | None:intergenic |
| GAATACCAGAAACATCTCTT+TGG | 0.430105 | 3_3:+83182958 | None:intergenic |
| GGTTTCTGAACACGCTCGTC+AGG | 0.431299 | 3_3:-83186492 | Msa0478450:CDS |
| TTCTCCTCCTCCAGCTGAGG+TGG | 0.434824 | 3_3:-83186699 | Msa0478450:CDS |
| GCTGAGGTGGGTCTACTGAT+AGG | 0.436377 | 3_3:-83186686 | Msa0478450:CDS |
| ATCAGTAGACCCACCTCAGC+TGG | 0.440463 | 3_3:+83186689 | None:intergenic |
| ATAAACCCCTCAACCTTTAC+GGG | 0.443239 | 3_3:+83180874 | None:intergenic |
| CGCGTTTCTTCTGCTTGTTG+AGG | 0.449872 | 3_3:+83186789 | None:intergenic |
| AAACTTTAGAGCGGCAGGTA+TGG | 0.450259 | 3_3:-83180760 | Msa0478450:three_prime_UTR |
| CAATAAATGCAGCACAAGTT+GGG | 0.453843 | 3_3:+83182497 | None:intergenic |
| TTCTGAAACTTTAGAGCGGC+AGG | 0.454950 | 3_3:-83180765 | Msa0478450:three_prime_UTR |
| CATTAAGGTTGAATTCTTGA+AGG | 0.456374 | 3_3:+83186406 | None:intergenic |
| CAGATACGCAAAAGAACATA+TGG | 0.457188 | 3_3:+83182920 | None:intergenic |
| TCTGGTATTCTTTCCTTTGG+TGG | 0.459621 | 3_3:-83182945 | Msa0478450:CDS |
| CAACTAAGACGGATAGTAGA+AGG | 0.459722 | 3_3:+83180912 | None:intergenic |
| TCAATAAATGCAGCACAAGT+TGG | 0.461420 | 3_3:+83182496 | None:intergenic |
| GATCCTCAACCAATTGGAAT+CGG | 0.461577 | 3_3:+83186735 | None:intergenic |
| GCGGAATCATTGGGAGGAGT+TGG | 0.465633 | 3_3:+83186617 | None:intergenic |
| AGAAGAAACCCGATTCCAAT+TGG | 0.472267 | 3_3:-83186744 | Msa0478450:CDS |
| GTCACTCAATGTCTGAAACT+TGG | 0.472574 | 3_3:+83185598 | None:intergenic |
| CATCGAAAATCGATTGGGTC+TGG | 0.474533 | 3_3:+83180707 | None:intergenic |
| TTCAACCTTAATGCTTTGCC+AGG | 0.474584 | 3_3:-83186396 | Msa0478450:intron |
| TTGAGATTTGGATTTGGAAG+AGG | 0.476820 | 3_3:+83186556 | None:intergenic |
| GATGAAGAGAGAAGAAGAAT+CGG | 0.476860 | 3_3:+83186526 | None:intergenic |
| ATCCTCAACCAATTGGAATC+GGG | 0.477881 | 3_3:+83186736 | None:intergenic |
| GATGAACCATCATGCAATAT+GGG | 0.478901 | 3_3:+83185620 | None:intergenic |
| TGAGGCGATCCTCAACCAAT+TGG | 0.481848 | 3_3:+83186729 | None:intergenic |
| AACTTGTGCTGCATTTATTG+AGG | 0.482705 | 3_3:-83182494 | Msa0478450:intron |
| AAATAACATCGAAAATCGAT+TGG | 0.486498 | 3_3:+83180701 | None:intergenic |
| AAGGATTTGAGTTACCTTCT+CGG | 0.489926 | 3_3:+83185964 | None:intergenic |
| TTGAGAAATGAGAGAATGTA+TGG | 0.490146 | 3_3:+83180844 | None:intergenic |
| AATGTTAGTCGGTGGCATTA+AGG | 0.491892 | 3_3:-83186462 | Msa0478450:CDS |
| AACTTTAGAGCGGCAGGTAT+GGG | 0.493798 | 3_3:-83180759 | Msa0478450:three_prime_UTR |
| AGGAAAATTCAGCTCCGCAT+TGG | 0.494706 | 3_3:-83186666 | Msa0478450:CDS |
| GGCATGGTGAAAGGCGTTGT+CGG | 0.494989 | 3_3:-83186767 | Msa0478450:CDS |
| GGGAGTTGCTGAAGCAGCGC+CGG | 0.496925 | 3_3:-83186037 | Msa0478450:CDS |
| TACAAGCCTGCAAAGTCGAC+TGG | 0.497312 | 3_3:-83182616 | Msa0478450:CDS |
| TATTTGCCCGTAAAGGTTGA+GGG | 0.499574 | 3_3:-83180880 | Msa0478450:exon |
| CACATTAGTGTTGTAGCTGC+CGG | 0.499950 | 3_3:-83180941 | Msa0478450:CDS |
| CTTGCCTTCCAACATCATGA+TGG | 0.500147 | 3_3:+83182556 | None:intergenic |
| TGAAGCAGCGCCGGCTTCGG+AGG | 0.505191 | 3_3:-83186028 | Msa0478450:CDS |
| TTCATAGTTTCCAAAACGGC+AGG | 0.509642 | 3_3:-83180806 | Msa0478450:three_prime_UTR |
| AACCCGATTCCAATTGGTTG+AGG | 0.512410 | 3_3:-83186738 | Msa0478450:CDS |
| AATAACATCGAAAATCGATT+GGG | 0.520426 | 3_3:+83180702 | None:intergenic |
| GGGCTGGATGATGGAGGAAG+CGG | 0.520494 | 3_3:+83186589 | None:intergenic |
| GGCTGGATGATGGAGGAAGC+GGG | 0.524033 | 3_3:+83186590 | None:intergenic |
| GAGGTGAATTTCTGAATAGG+AGG | 0.525367 | 3_3:+83181030 | None:intergenic |
| TTTACCCTTGCAGACTGTGA+AGG | 0.527139 | 3_3:-83186058 | Msa0478450:intron |
| GCAGCCTTCTGAGACTGTTG+AGG | 0.527649 | 3_3:-83181256 | Msa0478450:intron |
| ATCTGTTCATGCCAAAGAGC+TGG | 0.529357 | 3_3:-83185558 | Msa0478450:CDS |
| TCTCCTCCTCCAGCTGAGGT+GGG | 0.530633 | 3_3:-83186698 | Msa0478450:CDS |
| TTACCCTTGCAGACTGTGAA+GGG | 0.530842 | 3_3:-83186057 | Msa0478450:intron |
| TCCCAGTTAACCTCCGAAGC+CGG | 0.531096 | 3_3:+83186018 | None:intergenic |
| ATCTTCTCCTCCTCCAGCTG+AGG | 0.536726 | 3_3:-83186702 | Msa0478450:CDS |
| AAGAAACGCGGCATGGTGAA+AGG | 0.538367 | 3_3:-83186776 | Msa0478450:exon |
| TCAGGTAACCATCATGATGT+TGG | 0.538554 | 3_3:-83182564 | Msa0478450:CDS |
| GCCGGCTTCGGAGGTTAACT+GGG | 0.541698 | 3_3:-83186019 | Msa0478450:CDS |
| AGACCCACCTCAGCTGGAGG+AGG | 0.549560 | 3_3:+83186695 | None:intergenic |
| TACCAATTTACCGTCGATCA+GGG | 0.549914 | 3_3:+83185523 | None:intergenic |
| ATGAAGAGAGAAGAAGAATC+GGG | 0.554824 | 3_3:+83186527 | None:intergenic |
| ATAGAACTATCATTCAAGAA+TGG | 0.559917 | 3_3:+83183139 | None:intergenic |
| AAAATTGTAGAGATATCAGT+TGG | 0.560424 | 3_3:+83181112 | None:intergenic |
| TTTGTGTTATTTGCCCGTAA+AGG | 0.562982 | 3_3:-83180887 | Msa0478450:CDS |
| AGGTTGTTGGTGTCTATGTG+TGG | 0.566482 | 3_3:-83186442 | Msa0478450:CDS |
| AGGTTACCCATATTGCATGA+TGG | 0.567249 | 3_3:-83185626 | Msa0478450:CDS |
| TAATTTCTTATACATTTCAG+TGG | 0.567942 | 3_3:+83186851 | None:intergenic |
| AGTGATAAACTCCTGAAGCC+AGG | 0.570317 | 3_3:-83180965 | Msa0478450:CDS |
| GATGGAGGAAGCGGGTTCAG+CGG | 0.582275 | 3_3:+83186598 | None:intergenic |
| AGGTGAATTTCTGAATAGGA+GGG | 0.591017 | 3_3:+83181031 | None:intergenic |
| AGAACATATGGCGCCACCAA+AGG | 0.592128 | 3_3:+83182932 | None:intergenic |
| CAGGTTTCTAGAATGTTAGT+CGG | 0.593964 | 3_3:-83186473 | Msa0478450:CDS |
| GGATAGTAGAAGGATGAGAC+CGG | 0.594606 | 3_3:+83180922 | None:intergenic |
| AAATTTGTTATGGCCCGAGA+AGG | 0.596928 | 3_3:-83185978 | Msa0478450:intron |
| GATGCAAAAGCCCTGATCGA+CGG | 0.605969 | 3_3:-83185533 | Msa0478450:CDS |
| AAACTCTTCTAGGAAAAGGA+AGG | 0.609411 | 3_3:+83181319 | None:intergenic |
| TAACACAAAACCAACTAAGA+CGG | 0.610323 | 3_3:+83180901 | None:intergenic |
| CAAACCTCAACAGTCTCAGA+AGG | 0.613004 | 3_3:+83181252 | None:intergenic |
| GGTTGTTGGTGTCTATGTGT+GGG | 0.613008 | 3_3:-83186441 | Msa0478450:CDS |
| CTTATCGGGCTGGATGATGG+AGG | 0.616857 | 3_3:+83186583 | None:intergenic |
| AGAAATGAGAGAATGTATGG+AGG | 0.618796 | 3_3:+83180847 | None:intergenic |
| CTCAACAAGCAGAAGAAACG+CGG | 0.619096 | 3_3:-83186788 | Msa0478450:five_prime_UTR |
| GTAACCATCATGATGTTGGA+AGG | 0.622279 | 3_3:-83182560 | Msa0478450:CDS |
| ATTTGCCCGTAAAGGTTGAG+GGG | 0.623236 | 3_3:-83180879 | Msa0478450:exon |
| TGCACACCTTCTAACGAGCA+TGG | 0.625139 | 3_3:+83183181 | None:intergenic |
| AATCAACATCTGTCTCATCA+CGG | 0.639174 | 3_3:+83182586 | None:intergenic |
| AGTAGACCCACCTCAGCTGG+AGG | 0.640870 | 3_3:+83186692 | None:intergenic |
| AAGATGAAACTTGATGGCAG+AGG | 0.642265 | 3_3:-83180998 | Msa0478450:CDS |
| GTTTCTAGAATGTTAGTCGG+TGG | 0.644878 | 3_3:-83186470 | Msa0478450:CDS |
| TGTTGGAAGGCAAGTAAGCG+AGG | 0.658912 | 3_3:-83182547 | Msa0478450:CDS |
| GAGGAGGAGAAGATTTGGTG+AGG | 0.660746 | 3_3:+83186711 | None:intergenic |
| CAAGCAGAAGAAACGCGGCA+TGG | 0.662758 | 3_3:-83186783 | Msa0478450:exon |
| GCTACAACACTAATGTGACC+TGG | 0.663414 | 3_3:+83180947 | None:intergenic |
| AAAATATATATGAAGGAACG+AGG | 0.676077 | 3_3:-83180734 | Msa0478450:three_prime_UTR |
| GTACTTCTGAAACTTTAGAG+CGG | 0.685843 | 3_3:-83180769 | Msa0478450:three_prime_UTR |
| ACTGTTGCTTAAGCAATGCG+AGG | 0.696021 | 3_3:-83186887 | Msa0478450:five_prime_UTR |
| GGTTCAGCGGAATCATTGGG+AGG | 0.702919 | 3_3:+83186611 | None:intergenic |
| GAGAAAGACGCGATCCAATG+CGG | 0.713214 | 3_3:+83186652 | None:intergenic |
| ACATACGTCCCAGCTAACCA+CGG | 0.723439 | 3_3:+83181291 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATAAAATATCATATTTTATC+TGG | - | chr3_3:83182239-83182258 | Msa0478450:intron | 10.0% |
| !! | ATAAAATATCATATTATATC+TGG | - | chr3_3:83183444-83183463 | Msa0478450:intron | 10.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| ! | GGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181338-83181357 | None:intergenic | 100.0% |
| !!! | TGTAAATTGATTTTTGTATA+TGG | - | chr3_3:83181782-83181801 | Msa0478450:intron | 15.0% |
| !!! | ATATTTAGTATTTTAAGACT+CGG | - | chr3_3:83182423-83182442 | Msa0478450:intron | 15.0% |
| !!! | GATTTATTTTGTACAATTTT+AGG | - | chr3_3:83183193-83183212 | Msa0478450:CDS | 15.0% |
| !! | GTTAAATTTCTATTTATACT+TGG | + | chr3_3:83184048-83184067 | None:intergenic | 15.0% |
| !!! | GATTTATTTTGTACAATTTT+AGG | - | chr3_3:83183193-83183212 | Msa0478450:CDS | 15.0% |
| !! | TTTATAATGTTTACAACAAA+TGG | - | chr3_3:83185612-83185631 | Msa0478450:CDS | 15.0% |
| !! | AATGTATCAATTATCATTTA+TGG | + | chr3_3:83186020-83186039 | None:intergenic | 15.0% |
| !!! | ATTGATACATTTTGTTATTT+TGG | - | chr3_3:83186029-83186048 | Msa0478450:CDS | 15.0% |
| !! | TAATTTCTTATACATTTCAG+TGG | + | chr3_3:83180597-83180616 | None:intergenic | 20.0% |
| !!! | TAAGTTCTTTTCAAACTTTT+AGG | - | chr3_3:83181679-83181698 | Msa0478450:intron | 20.0% |
| !! | TGAATTATGAACATCAATAT+GGG | + | chr3_3:83182926-83182945 | None:intergenic | 20.0% |
| !! | ATGAATTATGAACATCAATA+TGG | + | chr3_3:83182927-83182946 | None:intergenic | 20.0% |
| !!! | TATTTTAGTATTTTAAGACC+CGG | - | chr3_3:83183628-83183647 | Msa0478450:intron | 20.0% |
| !! | TATTATTCATAAGATTGTCA+AGG | + | chr3_3:83183884-83183903 | None:intergenic | 20.0% |
| !! | TGAATTATGAACATCATTAT+GGG | + | chr3_3:83183959-83183978 | None:intergenic | 20.0% |
| !! | ATGAATTATGAACATCATTA+TGG | + | chr3_3:83183960-83183979 | None:intergenic | 20.0% |
| !! | TCTTAAGTTTGATATTTGTT+TGG | - | chr3_3:83184659-83184678 | Msa0478450:intron | 20.0% |
| !!! | TTTCAGAACTAAATCTTTTT+GGG | - | chr3_3:83186380-83186399 | Msa0478450:intron | 20.0% |
| !! | ATGGGAAAAAATATATATGA+AGG | - | chr3_3:83186704-83186723 | Msa0478450:CDS | 20.0% |
| ! | CATTTATAGTATATACTACC+TGG | + | chr3_3:83181070-83181089 | None:intergenic | 25.0% |
| ! | TGAACAAGTTAACTGAAATT+TGG | + | chr3_3:83181096-83181115 | None:intergenic | 25.0% |
| !! | ATGATTAATGATTTTCGTGT+TGG | - | chr3_3:83181131-83181150 | Msa0478450:CDS | 25.0% |
| !!! | TTTTTGTTTCTGGTATGATA+TGG | - | chr3_3:83181546-83181565 | Msa0478450:intron | 25.0% |
| !!! | ATTCTATTTCTATTTTGTGC+AGG | - | chr3_3:83181574-83181593 | Msa0478450:intron | 25.0% |
| ! | AAGAATATCCAAAATTTGTG+AGG | + | chr3_3:83181735-83181754 | None:intergenic | 25.0% |
| ! | TTTATTAACTAGAGTAGACT+TGG | - | chr3_3:83181758-83181777 | Msa0478450:intron | 25.0% |
| ! | TATTATTCACAAGATTGTCA+AGG | + | chr3_3:83182837-83182856 | None:intergenic | 25.0% |
| ! | ATCCCACATGATATAATATT+TGG | - | chr3_3:83182947-83182966 | Msa0478450:CDS | 25.0% |
| ! | CTCCAAATATTATATCATGT+GGG | + | chr3_3:83182952-83182971 | None:intergenic | 25.0% |
| ! | TCTCCAAATATTATATCATG+TGG | + | chr3_3:83182953-83182972 | None:intergenic | 25.0% |
| ! | AGAGAGAAAAACAAATATCT+GGG | + | chr3_3:83183096-83183115 | None:intergenic | 25.0% |
| ! | TAGAGAGAAAAACAAATATC+TGG | + | chr3_3:83183097-83183116 | None:intergenic | 25.0% |
| !! | GTTAGAAGTTGTTAATTTTC+TGG | - | chr3_3:83183238-83183257 | Msa0478450:intron | 25.0% |
| ! | ATCCCACATGATATAATATT+AGG | - | chr3_3:83182947-83182966 | Msa0478450:CDS | 25.0% |
| ! | CTCCTAATATTATATCATGT+GGG | + | chr3_3:83183985-83184004 | None:intergenic | 25.0% |
| ! | TCTCCTAATATTATATCATG+TGG | + | chr3_3:83183986-83184005 | None:intergenic | 25.0% |
| !!! | GTTGCTATTATTTGTGATTT+TGG | - | chr3_3:83184007-83184026 | Msa0478450:intron | 25.0% |
| ! | AGAGAGAAAAACAAATATCT+GGG | + | chr3_3:83183096-83183115 | None:intergenic | 25.0% |
| ! | TAGAGAGAAAAACAAATATC+TGG | + | chr3_3:83183097-83183116 | None:intergenic | 25.0% |
| ! | ATAGAACTATCATTCAAGAA+TGG | + | chr3_3:83184309-83184328 | None:intergenic | 25.0% |
| !! | TTGAATGATAGTTCTATTGA+AGG | - | chr3_3:83184312-83184331 | Msa0478450:intron | 25.0% |
| ! | AACTTCTGTTCGTTTATTTA+AGG | - | chr3_3:83184632-83184651 | Msa0478450:intron | 25.0% |
| ! | ACTTCTGTTCGTTTATTTAA+GGG | - | chr3_3:83184633-83184652 | Msa0478450:intron | 25.0% |
| ! | ATCAAATAACCATATTTCAG+GGG | + | chr3_3:83184693-83184712 | None:intergenic | 25.0% |
| ! | CATCAAATAACCATATTTCA+GGG | + | chr3_3:83184694-83184713 | None:intergenic | 25.0% |
| ! | GATGATGACAAAAACTTAAA+AGG | + | chr3_3:83185147-83185166 | None:intergenic | 25.0% |
| !! | TTTTGTCATCATCTAATAGA+TGG | - | chr3_3:83185154-83185173 | Msa0478450:intron | 25.0% |
| ! | CATCTAATAGATGGTTTATT+CGG | - | chr3_3:83185163-83185182 | Msa0478450:intron | 25.0% |
| !! | CATACAAAAATGTGTTACTA+GGG | + | chr3_3:83185495-83185514 | None:intergenic | 25.0% |
| ! | TTGATGTGCTTAAACTTAAT+AGG | - | chr3_3:83185886-83185905 | Msa0478450:intron | 25.0% |
| ! | TGATGTGCTTAAACTTAATA+GGG | - | chr3_3:83185887-83185906 | Msa0478450:intron | 25.0% |
| ! | AATTGATTATCACTTCTAGA+TGG | + | chr3_3:83185993-83186012 | None:intergenic | 25.0% |
| !!! | TTTTGTTTGCATATCTGATT+TGG | - | chr3_3:83186235-83186254 | Msa0478450:intron | 25.0% |
| !!! | ATTACTTGTGATTTGTTCTT+AGG | - | chr3_3:83186269-83186288 | Msa0478450:intron | 25.0% |
| ! | AAAATTGTAGAGATATCAGT+TGG | + | chr3_3:83186336-83186355 | None:intergenic | 25.0% |
| !! | AACTGATATCTCTACAATTT+TGG | - | chr3_3:83186335-83186354 | Msa0478450:intron | 25.0% |
| !! | AAAGATATGACTTCTTTTTC+TGG | + | chr3_3:83186363-83186382 | None:intergenic | 25.0% |
| !! | CTTTCAGAACTAAATCTTTT+TGG | - | chr3_3:83186379-83186398 | Msa0478450:intron | 25.0% |
| ! | AAAATATATATGAAGGAACG+AGG | - | chr3_3:83186711-83186730 | Msa0478450:CDS | 25.0% |
| ! | AATAACATCGAAAATCGATT+GGG | + | chr3_3:83186746-83186765 | None:intergenic | 25.0% |
| ! | AAATAACATCGAAAATCGAT+TGG | + | chr3_3:83186747-83186766 | None:intergenic | 25.0% |
| AAAAAAACTAGAGTTAGAGC+AGG | - | chr3_3:83180624-83180643 | Msa0478450:three_prime_UTR | 30.0% | |
| ! | TTTGGAAGAGGTTTTCTTAT+CGG | + | chr3_3:83180880-83180899 | None:intergenic | 30.0% |
| ! | TTGAGTTTGAGATTTGGATT+TGG | + | chr3_3:83180898-83180917 | None:intergenic | 30.0% |
| CATTAAGGTTGAATTCTTGA+AGG | + | chr3_3:83181042-83181061 | None:intergenic | 30.0% | |
| !! | CTACTTCTGCAAATTTGTTA+TGG | - | chr3_3:83181457-83181476 | Msa0478450:intron | 30.0% |
| TCAACTAAATCACCAACTTT+GGG | + | chr3_3:83181522-83181541 | None:intergenic | 30.0% | |
| ATCAACTAAATCACCAACTT+TGG | + | chr3_3:83181523-83181542 | None:intergenic | 30.0% | |
| !!! | AGTTGATGAGTTTTTGTTTC+TGG | - | chr3_3:83181536-83181555 | Msa0478450:intron | 30.0% |
| !!! | TCCCCATTTTAAAATCACAA+GGG | + | chr3_3:83181653-83181672 | None:intergenic | 30.0% |
| !!! | TTCCCCATTTTAAAATCACA+AGG | + | chr3_3:83181654-83181673 | None:intergenic | 30.0% |
| !!! | TTGTGATTTTAAAATGGGGA+AGG | - | chr3_3:83181653-83181672 | Msa0478450:intron | 30.0% |
| GTATGCACAACTTTAATCTT+AGG | - | chr3_3:83181703-83181722 | Msa0478450:intron | 30.0% | |
| ! | ATCTTGTCACTTCTAATTTG+TGG | - | chr3_3:83181959-83181978 | Msa0478450:intron | 30.0% |
| TAGCAAAGTTGTTAATTCTC+TGG | - | chr3_3:83182041-83182060 | Msa0478450:intron | 30.0% | |
| TGTTCAAACTAAATCACAAG+AGG | + | chr3_3:83182085-83182104 | None:intergenic | 30.0% | |
| AAACTGTATCCTATAGATTG+TGG | - | chr3_3:83182163-83182182 | Msa0478450:intron | 30.0% | |
| TATCACTATCCACAATCTAT+AGG | + | chr3_3:83182175-83182194 | None:intergenic | 30.0% | |
| TAGATTGTGGATAGTGATAT+TGG | - | chr3_3:83182176-83182195 | Msa0478450:intron | 30.0% | |
| AGATTGTGGATAGTGATATT+GGG | - | chr3_3:83182177-83182196 | Msa0478450:intron | 30.0% | |
| ATTAACTCGAACTATCTCAT+AGG | - | chr3_3:83182263-83182282 | Msa0478450:intron | 30.0% | |
| AAGTTACCACTTATAGACAT+AGG | - | chr3_3:83182521-83182540 | Msa0478450:CDS | 30.0% | |
| ! | TCTTGTTTCATAAGCAAATG+TGG | + | chr3_3:83182547-83182566 | None:intergenic | 30.0% |
| ! | TAATTTTCTTCAGTGTCAGA+GGG | + | chr3_3:83182578-83182597 | None:intergenic | 30.0% |
| ! | TTAATTTTCTTCAGTGTCAG+AGG | + | chr3_3:83182579-83182598 | None:intergenic | 30.0% |
| GACACTGAAGAAAATTAATG+AGG | - | chr3_3:83182581-83182600 | Msa0478450:CDS | 30.0% | |
| GCTTTGACCTGAATTTAAAA+GGG | + | chr3_3:83182637-83182656 | None:intergenic | 30.0% | |
| AAAAATGAGCCAATACAAAC+AGG | - | chr3_3:83182900-83182919 | Msa0478450:CDS | 30.0% | |
| !! | GTTGCTGTTATTTGTGATTT+TGG | - | chr3_3:83182974-83182993 | Msa0478450:intron | 30.0% |
| GAGAGAAAAACAAATATCTG+GGG | + | chr3_3:83183095-83183114 | None:intergenic | 30.0% | |
| TGATCAAACTAAATCACAAG+AGG | + | chr3_3:83183290-83183309 | None:intergenic | 30.0% | |
| TTAATCTCTTCTTTGTTCCT+TGG | - | chr3_3:83183336-83183355 | Msa0478450:intron | 30.0% | |
| AAACTGTATCCTATAGATTG+TGG | - | chr3_3:83182163-83182182 | Msa0478450:intron | 30.0% | |
| TATCACTATCCACAATCTAT+AGG | + | chr3_3:83182175-83182194 | None:intergenic | 30.0% | |
| TAGATTGTGGATAGTGATAT+TGG | - | chr3_3:83182176-83182195 | Msa0478450:intron | 30.0% | |
| AGATTGTGGATAGTGATATT+GGG | - | chr3_3:83182177-83182196 | Msa0478450:intron | 30.0% | |
| ATTAACTCGAACTATCTCAT+AGG | - | chr3_3:83182263-83182282 | Msa0478450:intron | 30.0% | |
| ATTTGTTTCCCTGTTCTATT+AGG | - | chr3_3:83183525-83183544 | Msa0478450:intron | 30.0% | |
| !! | CTATTATTTGTGATTTTGGC+TGG | - | chr3_3:83184011-83184030 | Msa0478450:intron | 30.0% |
| GAGAGAAAAACAAATATCTG+GGG | + | chr3_3:83183095-83183114 | None:intergenic | 30.0% | |
| CGTATACCATATGAATATTC+TGG | - | chr3_3:83184350-83184369 | Msa0478450:intron | 30.0% | |
| TTGCAACCAGAATATTCATA+TGG | + | chr3_3:83184359-83184378 | None:intergenic | 30.0% | |
| !!! | ACTTTTGTTATTTCTCCAGT+TGG | - | chr3_3:83184381-83184400 | Msa0478450:intron | 30.0% |
| AAATGAAGTTTCAAACCAAC+TGG | + | chr3_3:83184399-83184418 | None:intergenic | 30.0% | |
| ACAAGTTGTCACTGATATAA+AGG | - | chr3_3:83184568-83184587 | Msa0478450:intron | 30.0% | |
| CCATCAAATAACCATATTTC+AGG | + | chr3_3:83184695-83184714 | None:intergenic | 30.0% | |
| CCTGAAATATGGTTATTTGA+TGG | - | chr3_3:83184692-83184711 | Msa0478450:intron | 30.0% | |
| TTCACTCAATAAACACATGA+GGG | + | chr3_3:83184722-83184741 | None:intergenic | 30.0% | |
| AAGACAATATTGGAAAGATC+AGG | + | chr3_3:83184777-83184796 | None:intergenic | 30.0% | |
| TGATCTTTCCAATATTGTCT+TGG | - | chr3_3:83184776-83184795 | Msa0478450:intron | 30.0% | |
| ATTGTGATCCAAGACAATAT+TGG | + | chr3_3:83184787-83184806 | None:intergenic | 30.0% | |
| GCTGATGATAAAATCTTAGA+AGG | + | chr3_3:83185094-83185113 | None:intergenic | 30.0% | |
| ! | TTTTATCATCAGCTACTAGA+TGG | - | chr3_3:83185101-83185120 | Msa0478450:intron | 30.0% |
| TGACAAAAACTTAAAAGGCA+AGG | + | chr3_3:83185142-83185161 | None:intergenic | 30.0% | |
| ! | ACATCAAGATTTTTGTAGCA+GGG | + | chr3_3:83185337-83185356 | None:intergenic | 30.0% |
| ! | TACATCAAGATTTTTGTAGC+AGG | + | chr3_3:83185338-83185357 | None:intergenic | 30.0% |
| ! | GCATACAAAAATGTGTTACT+AGG | + | chr3_3:83185496-83185515 | None:intergenic | 30.0% |
| TTAAACTTAATAGGGTGCAA+TGG | - | chr3_3:83185895-83185914 | Msa0478450:intron | 30.0% | |
| ACTCTCAAAAAACACTTTAC+AGG | + | chr3_3:83185957-83185976 | None:intergenic | 30.0% | |
| TAATCAAATGTTCCAAACCA+GGG | + | chr3_3:83186064-83186083 | None:intergenic | 30.0% | |
| TTAATCAAATGTTCCAAACC+AGG | + | chr3_3:83186065-83186084 | None:intergenic | 30.0% | |
| !!! | GGTTTTAAAAGATCACTGTA+TGG | - | chr3_3:83186290-83186309 | Msa0478450:intron | 30.0% |
| ! | TTTGAGGTGAATTTCTGAAT+AGG | + | chr3_3:83186421-83186440 | None:intergenic | 30.0% |
| TAACACAAAACCAACTAAGA+CGG | + | chr3_3:83186547-83186566 | None:intergenic | 30.0% | |
| TTGAGAAATGAGAGAATGTA+TGG | + | chr3_3:83186604-83186623 | None:intergenic | 30.0% | |
| ! | CGTTTTCATAGTTTCCAAAA+CGG | - | chr3_3:83186635-83186654 | Msa0478450:CDS | 30.0% |
| ! | TTGGAAGAGGTTTTCTTATC+GGG | + | chr3_3:83180879-83180898 | None:intergenic | 35.0% |
| TTGAGATTTGGATTTGGAAG+AGG | + | chr3_3:83180892-83180911 | None:intergenic | 35.0% | |
| ATGAAGAGAGAAGAAGAATC+GGG | + | chr3_3:83180921-83180940 | None:intergenic | 35.0% | |
| GATGAAGAGAGAAGAAGAAT+CGG | + | chr3_3:83180922-83180941 | None:intergenic | 35.0% | |
| TCTCTTCATCGACAATGATT+GGG | - | chr3_3:83180932-83180951 | Msa0478450:CDS | 35.0% | |
| !! | CAGGTTTCTAGAATGTTAGT+CGG | - | chr3_3:83180972-83180991 | Msa0478450:CDS | 35.0% |
| ACGTAAAACCAACAACACTT+CGG | + | chr3_3:83181290-83181309 | None:intergenic | 35.0% | |
| ! | AAGGATTTGAGTTACCTTCT+CGG | + | chr3_3:83181484-83181503 | None:intergenic | 35.0% |
| !!! | CTATTTCTATTTTGTGCAGG+TGG | - | chr3_3:83181577-83181596 | Msa0478450:intron | 35.0% |
| !! | ACGCCCTTGTGATTTTAAAA+TGG | - | chr3_3:83181647-83181666 | Msa0478450:intron | 35.0% |
| !!! | CGCCCTTGTGATTTTAAAAT+GGG | - | chr3_3:83181648-83181667 | Msa0478450:intron | 35.0% |
| !!! | GCCCTTGTGATTTTAAAATG+GGG | - | chr3_3:83181649-83181668 | Msa0478450:intron | 35.0% |
| ! | GGTAACAACCTCACAAATTT+TGG | - | chr3_3:83181724-83181743 | Msa0478450:intron | 35.0% |
| ATATGGTATCGTGTCTTACA+AGG | - | chr3_3:83181799-83181818 | Msa0478450:intron | 35.0% | |
| GATGAACCATCATGCAATAT+GGG | + | chr3_3:83181828-83181847 | None:intergenic | 35.0% | |
| TTAGAAGTGACAAGATAGAG+TGG | + | chr3_3:83181955-83181974 | None:intergenic | 35.0% | |
| ! | TACAGTTTTCTATTGCAGCA+AGG | + | chr3_3:83182151-83182170 | None:intergenic | 35.0% |
| ATCTGTTTCCCTGTTCTATT+AGG | - | chr3_3:83182320-83182339 | Msa0478450:intron | 35.0% | |
| TTCCCTGTTCTATTAGGATT+AGG | - | chr3_3:83182326-83182345 | Msa0478450:intron | 35.0% | |
| CTCCTAATCCTAATAGAACA+GGG | + | chr3_3:83182331-83182350 | None:intergenic | 35.0% | |
| ACTCCTAATCCTAATAGAAC+AGG | + | chr3_3:83182332-83182351 | None:intergenic | 35.0% | |
| ATAAAACGTGCATGTGTAAG+TGG | - | chr3_3:83182485-83182504 | Msa0478450:intron | 35.0% | |
| TAAAACGTGCATGTGTAAGT+GGG | - | chr3_3:83182486-83182505 | Msa0478450:intron | 35.0% | |
| ! | AATTTTCTTCAGTGTCAGAG+GGG | + | chr3_3:83182577-83182596 | None:intergenic | 35.0% |
| ! | TGGGATTCCCTTTTAAATTC+AGG | - | chr3_3:83182627-83182646 | Msa0478450:CDS | 35.0% |
| ! | GGCTTTGACCTGAATTTAAA+AGG | + | chr3_3:83182638-83182657 | None:intergenic | 35.0% |
| TTAACAACTTCTAACGAGCA+CGG | + | chr3_3:83183233-83183252 | None:intergenic | 35.0% | |
| TTCCCTGTTCTATTAGGATT+AGG | - | chr3_3:83182326-83182345 | Msa0478450:intron | 35.0% | |
| CTCCTAATCCTAATAGAACA+GGG | + | chr3_3:83182331-83182350 | None:intergenic | 35.0% | |
| ACTCCTAATCCTAATAGAAC+AGG | + | chr3_3:83182332-83182351 | None:intergenic | 35.0% | |
| TCAAACTACATTGTTGCAAC+CGG | + | chr3_3:83183650-83183669 | None:intergenic | 35.0% | |
| ATAAAACGTGCATGTGTAAG+TGG | - | chr3_3:83182485-83182504 | Msa0478450:intron | 35.0% | |
| TAAAACGTGCATGTGTAAGT+GGG | - | chr3_3:83182486-83182505 | Msa0478450:intron | 35.0% | |
| AAGCTACCACTTATAGACAT+AGG | - | chr3_3:83183730-83183749 | Msa0478450:intron | 35.0% | |
| AGCTACCACTTATAGACATA+GGG | - | chr3_3:83183731-83183750 | Msa0478450:intron | 35.0% | |
| ! | TTATAGACATAGGGCTTGTT+TGG | - | chr3_3:83183740-83183759 | Msa0478450:intron | 35.0% |
| AAAAATGAGCCAATCCAAAC+AGG | - | chr3_3:83183933-83183952 | Msa0478450:intron | 35.0% | |
| GAATACCAGAAACATCTCTT+TGG | + | chr3_3:83184490-83184509 | None:intergenic | 35.0% | |
| !! | GTTTCTGGTATTCTTTCCTT+TGG | - | chr3_3:83184497-83184516 | Msa0478450:intron | 35.0% |
| CAGATACGCAAAAGAACATA+TGG | + | chr3_3:83184528-83184547 | None:intergenic | 35.0% | |
| TCAGTGACAACTTGTGAAAT+TGG | + | chr3_3:83184563-83184582 | None:intergenic | 35.0% | |
| GAAATATCTCCCCTGAAATA+TGG | - | chr3_3:83184681-83184700 | Msa0478450:intron | 35.0% | |
| CTTCACTCAATAAACACATG+AGG | + | chr3_3:83184723-83184742 | None:intergenic | 35.0% | |
| AAAGATCAGGAAGTGAATGA+GGG | + | chr3_3:83184764-83184783 | None:intergenic | 35.0% | |
| TGGATCACAATTATGTGCAT+AGG | - | chr3_3:83184796-83184815 | Msa0478450:intron | 35.0% | |
| GGATCACAATTATGTGCATA+GGG | - | chr3_3:83184797-83184816 | Msa0478450:intron | 35.0% | |
| AATCAACATCTGTCTCATCA+CGG | + | chr3_3:83184862-83184881 | None:intergenic | 35.0% | |
| CAATAAATGCAGCACAAGTT+GGG | + | chr3_3:83184951-83184970 | None:intergenic | 35.0% | |
| TCAATAAATGCAGCACAAGT+TGG | + | chr3_3:83184952-83184971 | None:intergenic | 35.0% | |
| AACTTGTGCTGCATTTATTG+AGG | - | chr3_3:83184951-83184970 | Msa0478450:intron | 35.0% | |
| ! | GTTTTCTCAGCACAGAAAAT+TGG | + | chr3_3:83185021-83185040 | None:intergenic | 35.0% |
| TGATAAAATCTTAGAAGGCG+AGG | + | chr3_3:83185089-83185108 | None:intergenic | 35.0% | |
| GTGTTTAAGCTAGTGCAATA+TGG | - | chr3_3:83185266-83185285 | Msa0478450:intron | 35.0% | |
| ! | CATCAAGATTTTTGTAGCAG+GGG | + | chr3_3:83185336-83185355 | None:intergenic | 35.0% |
| TGTTCATGTTAAGCTTAAGC+AGG | + | chr3_3:83185361-83185380 | None:intergenic | 35.0% | |
| ! | CGAGATTCTATTTTACACCA+GGG | + | chr3_3:83185426-83185445 | None:intergenic | 35.0% |
| CCTGGTGTAAAATAGAATCT+CGG | - | chr3_3:83185424-83185443 | Msa0478450:intron | 35.0% | |
| TTAGAAAGTAGTTCCACGTA+TGG | - | chr3_3:83185826-83185845 | Msa0478450:CDS | 35.0% | |
| ! | AAACTCTTCTAGGAAAAGGA+AGG | + | chr3_3:83186129-83186148 | None:intergenic | 35.0% |
| ! | GCAAAAACTCTTCTAGGAAA+AGG | + | chr3_3:83186133-83186152 | None:intergenic | 35.0% |
| !!! | GCATATCTGATTTGGTTTTG+AGG | - | chr3_3:83186243-83186262 | Msa0478450:intron | 35.0% |
| AGGTGAATTTCTGAATAGGA+GGG | + | chr3_3:83186417-83186436 | None:intergenic | 35.0% | |
| GTTTCATCTTGTCTTCTTTG+AGG | + | chr3_3:83186437-83186456 | None:intergenic | 35.0% | |
| GAAGACAAGATGAAACTTGA+TGG | - | chr3_3:83186441-83186460 | Msa0478450:CDS | 35.0% | |
| !! | TTTGTGTTATTTGCCCGTAA+AGG | - | chr3_3:83186558-83186577 | Msa0478450:CDS | 35.0% |
| AGAAATGAGAGAATGTATGG+AGG | + | chr3_3:83186601-83186620 | None:intergenic | 35.0% | |
| !! | GTACTTCTGAAACTTTAGAG+CGG | - | chr3_3:83186676-83186695 | Msa0478450:CDS | 35.0% |
| AGAAGAAACCCGATTCCAAT+TGG | - | chr3_3:83180701-83180720 | Msa0478450:three_prime_UTR | 40.0% | |
| ATCCTCAACCAATTGGAATC+GGG | + | chr3_3:83180712-83180731 | None:intergenic | 40.0% | |
| GATCCTCAACCAATTGGAAT+CGG | + | chr3_3:83180713-83180732 | None:intergenic | 40.0% | |
| !! | ATCGGGTTGAGTTTGAGATT+TGG | + | chr3_3:83180904-83180923 | None:intergenic | 40.0% |
| CTCTCTTCATCGACAATGAT+TGG | - | chr3_3:83180931-83180950 | Msa0478450:CDS | 40.0% | |
| !! | GTTTCTAGAATGTTAGTCGG+TGG | - | chr3_3:83180975-83180994 | Msa0478450:CDS | 40.0% |
| AATGTTAGTCGGTGGCATTA+AGG | - | chr3_3:83180983-83181002 | Msa0478450:CDS | 40.0% | |
| TTCAACCTTAATGCTTTGCC+AGG | - | chr3_3:83181049-83181068 | Msa0478450:CDS | 40.0% | |
| ! | TACTACCTGGCAAAGCATTA+AGG | + | chr3_3:83181057-83181076 | None:intergenic | 40.0% |
| !!! | TTGGTTTTACGTAGCTCTCT+TGG | - | chr3_3:83181298-83181317 | Msa0478450:CDS | 40.0% |
| TTTACGTAGCTCTCTTGGTT+AGG | - | chr3_3:83181303-83181322 | Msa0478450:CDS | 40.0% | |
| !! | AAATTTGTTATGGCCCGAGA+AGG | - | chr3_3:83181467-83181486 | Msa0478450:intron | 40.0% |
| ! | AGGATTTGAGTTACCTTCTC+GGG | + | chr3_3:83181483-83181502 | None:intergenic | 40.0% |
| ! | TGGGAGTGTAACACAATAGA+AGG | + | chr3_3:83181503-83181522 | None:intergenic | 40.0% |
| TTGTGTTACACTCCCAAAGT+TGG | - | chr3_3:83181507-83181526 | Msa0478450:intron | 40.0% | |
| AGGTTACCCATATTGCATGA+TGG | - | chr3_3:83181819-83181838 | Msa0478450:intron | 40.0% | |
| GGATGAACCATCATGCAATA+TGG | + | chr3_3:83181829-83181848 | None:intergenic | 40.0% | |
| ! | GTCACTCAATGTCTGAAACT+TGG | + | chr3_3:83181850-83181869 | None:intergenic | 40.0% |
| TACCAATTTACCGTCGATCA+GGG | + | chr3_3:83181925-83181944 | None:intergenic | 40.0% | |
| TTACCAATTTACCGTCGATC+AGG | + | chr3_3:83181926-83181945 | None:intergenic | 40.0% | |
| TGTGGATAGTGATATTGGGT+TGG | - | chr3_3:83182181-83182200 | Msa0478450:intron | 40.0% | |
| GTGGATAGTGATATTGGGTT+GGG | - | chr3_3:83182182-83182201 | Msa0478450:intron | 40.0% | |
| ! | TGGATAGTGATATTGGGTTG+GGG | - | chr3_3:83182183-83182202 | Msa0478450:intron | 40.0% |
| TGTATTGTGTCCCTATGACA+AGG | - | chr3_3:83182354-83182373 | Msa0478450:intron | 40.0% | |
| GTATTGTGTCCCTATGACAA+GGG | - | chr3_3:83182355-83182374 | Msa0478450:intron | 40.0% | |
| TATTGTGTCCCTATGACAAG+GGG | - | chr3_3:83182356-83182375 | Msa0478450:intron | 40.0% | |
| ATGTGGCCTATGTCTATAAG+TGG | + | chr3_3:83182530-83182549 | None:intergenic | 40.0% | |
| CAGTTGTTCTCAGCGTAATT+GGG | + | chr3_3:83182609-83182628 | None:intergenic | 40.0% | |
| CAATTACGCTGAGAACAACT+GGG | - | chr3_3:83182608-83182627 | Msa0478450:CDS | 40.0% | |
| CAATATGGGCCTGTTTGTAT+TGG | + | chr3_3:83182912-83182931 | None:intergenic | 40.0% | |
| ! | TACAGTTTTCTCTTGCACCA+AGG | + | chr3_3:83183356-83183375 | None:intergenic | 40.0% |
| TGTGGATAGTGATATTGGGT+TGG | - | chr3_3:83182181-83182200 | Msa0478450:intron | 40.0% | |
| GTGGATAGTGATATTGGGTT+GGG | - | chr3_3:83182182-83182201 | Msa0478450:intron | 40.0% | |
| ! | TGGATAGTGATATTGGGTTG+GGG | - | chr3_3:83182183-83182202 | Msa0478450:intron | 40.0% |
| CAAACTACATTGTTGCAACC+GGG | + | chr3_3:83183649-83183668 | None:intergenic | 40.0% | |
| ACAAGCCCTATGTCTATAAG+TGG | + | chr3_3:83183739-83183758 | None:intergenic | 40.0% | |
| AACATCATTATGGGCCTGTT+TGG | + | chr3_3:83183950-83183969 | None:intergenic | 40.0% | |
| AGATTAACAACACCTAGGGT+GGG | + | chr3_3:83184105-83184124 | None:intergenic | 40.0% | |
| AAGATTAACAACACCTAGGG+TGG | + | chr3_3:83184106-83184125 | None:intergenic | 40.0% | |
| GGGAAGATTAACAACACCTA+GGG | + | chr3_3:83184109-83184128 | None:intergenic | 40.0% | |
| TACAGCCAAAGAGATGTTTC+TGG | - | chr3_3:83184482-83184501 | Msa0478450:intron | 40.0% | |
| TCTGGTATTCTTTCCTTTGG+TGG | - | chr3_3:83184500-83184519 | Msa0478450:intron | 40.0% | |
| GAAAGATCAGGAAGTGAATG+AGG | + | chr3_3:83184765-83184784 | None:intergenic | 40.0% | |
| ! | TTATATCCAGTCGACTTTGC+AGG | + | chr3_3:83184838-83184857 | None:intergenic | 40.0% |
| !! | GATGAGACAGATGTTGATTC+AGG | - | chr3_3:83184863-83184882 | Msa0478450:intron | 40.0% |
| TCAGGTAACCATCATGATGT+TGG | - | chr3_3:83184881-83184900 | Msa0478450:intron | 40.0% | |
| GTAACCATCATGATGTTGGA+AGG | - | chr3_3:83184885-83184904 | Msa0478450:intron | 40.0% | |
| TATATGCTTGTTCCTGAGTC+CGG | - | chr3_3:83185052-83185071 | Msa0478450:intron | 40.0% | |
| ! | AAGATTTTTGTAGCAGGGGT+AGG | + | chr3_3:83185332-83185351 | None:intergenic | 40.0% |
| ! | CCGAGATTCTATTTTACACC+AGG | + | chr3_3:83185427-83185446 | None:intergenic | 40.0% |
| GAAGATGCTATGAAGCTGAT+TGG | + | chr3_3:83185532-83185551 | None:intergenic | 40.0% | |
| AACAAAACGAGCGGAAATCT+AGG | + | chr3_3:83185554-83185573 | None:intergenic | 40.0% | |
| AATGGTTTCTCCTTTCTCAG+TGG | - | chr3_3:83185913-83185932 | Msa0478450:intron | 40.0% | |
| ATGGTTTCTCCTTTCTCAGT+GGG | - | chr3_3:83185914-83185933 | Msa0478450:intron | 40.0% | |
| !! | TATTTTGGATTCCCATACCC+TGG | - | chr3_3:83186044-83186063 | Msa0478450:CDS | 40.0% |
| AATGTTCCAAACCAGGGTAT+GGG | + | chr3_3:83186058-83186077 | None:intergenic | 40.0% | |
| AAATGTTCCAAACCAGGGTA+TGG | + | chr3_3:83186059-83186078 | None:intergenic | 40.0% | |
| GATATCAGTTGGAGCTTTCA+TGG | + | chr3_3:83186325-83186344 | None:intergenic | 40.0% | |
| GAGGTGAATTTCTGAATAGG+AGG | + | chr3_3:83186418-83186437 | None:intergenic | 40.0% | |
| ! | AAGATGAAACTTGATGGCAG+AGG | - | chr3_3:83186447-83186466 | Msa0478450:CDS | 40.0% |
| CAACTAAGACGGATAGTAGA+AGG | + | chr3_3:83186536-83186555 | None:intergenic | 40.0% | |
| CTTCTACTATCCGTCTTAGT+TGG | - | chr3_3:83186534-83186553 | Msa0478450:CDS | 40.0% | |
| TTATTTGCCCGTAAAGGTTG+AGG | - | chr3_3:83186564-83186583 | Msa0478450:CDS | 40.0% | |
| TATTTGCCCGTAAAGGTTGA+GGG | - | chr3_3:83186565-83186584 | Msa0478450:CDS | 40.0% | |
| ATAAACCCCTCAACCTTTAC+GGG | + | chr3_3:83186574-83186593 | None:intergenic | 40.0% | |
| GATAAACCCCTCAACCTTTA+CGG | + | chr3_3:83186575-83186594 | None:intergenic | 40.0% | |
| TTCATAGTTTCCAAAACGGC+AGG | - | chr3_3:83186639-83186658 | Msa0478450:CDS | 40.0% | |
| ! | ACTGTTGCTTAAGCAATGCG+AGG | - | chr3_3:83180558-83180577 | Msa0478450:three_prime_UTR | 45.0% |
| ! | GCGTTTCTTCTGCTTGTTGA+GGG | + | chr3_3:83180658-83180677 | None:intergenic | 45.0% |
| CTCAACAAGCAGAAGAAACG+CGG | - | chr3_3:83180657-83180676 | Msa0478450:three_prime_UTR | 45.0% | |
| AACCCGATTCCAATTGGTTG+AGG | - | chr3_3:83180707-83180726 | Msa0478450:three_prime_UTR | 45.0% | |
| AGGAAAATTCAGCTCCGCAT+TGG | - | chr3_3:83180779-83180798 | Msa0478450:three_prime_UTR | 45.0% | |
| ! | TTTCTTATCGGGCTGGATGA+TGG | + | chr3_3:83180868-83180887 | None:intergenic | 45.0% |
| ! | AAGAGGTTTTCTTATCGGGC+TGG | + | chr3_3:83180875-83180894 | None:intergenic | 45.0% |
| ! | AGGTTGTTGGTGTCTATGTG+TGG | - | chr3_3:83181003-83181022 | Msa0478450:CDS | 45.0% |
| ! | GGTTGTTGGTGTCTATGTGT+GGG | - | chr3_3:83181004-83181023 | Msa0478450:CDS | 45.0% |
| ! | CTTCGGATCAAAGGTGTATC+AGG | + | chr3_3:83181273-83181292 | None:intergenic | 45.0% |
| CCAACAACACTTCGGATCAA+AGG | + | chr3_3:83181282-83181301 | None:intergenic | 45.0% | |
| !! | CCTTTGATCCGAAGTGTTGT+TGG | - | chr3_3:83181279-83181298 | Msa0478450:CDS | 45.0% |
| AGTCTGCAAGGGTAAAAGGA+GGG | + | chr3_3:83181383-83181402 | None:intergenic | 45.0% | |
| TCACAGTCTGCAAGGGTAAA+AGG | + | chr3_3:83181387-83181406 | None:intergenic | 45.0% | |
| TTTACCCTTGCAGACTGTGA+AGG | - | chr3_3:83181387-83181406 | Msa0478450:intron | 45.0% | |
| TTACCCTTGCAGACTGTGAA+GGG | - | chr3_3:83181388-83181407 | Msa0478450:intron | 45.0% | |
| ATCTGTTCATGCCAAAGAGC+TGG | - | chr3_3:83181887-83181906 | Msa0478450:intron | 45.0% | |
| ! | TTTTGCATCTGCCAGCTCTT+TGG | + | chr3_3:83181901-83181920 | None:intergenic | 45.0% |
| CCAGTTGTTCTCAGCGTAAT+TGG | + | chr3_3:83182610-83182629 | None:intergenic | 45.0% | |
| CCAATTACGCTGAGAACAAC+TGG | - | chr3_3:83182607-83182626 | Msa0478450:CDS | 45.0% | |
| TCACTGTCAAGGTCAACGAT+TGG | - | chr3_3:83182670-83182689 | Msa0478450:intron | 45.0% | |
| CACTGTCAAGGTCAACGATT+GGG | - | chr3_3:83182671-83182690 | Msa0478450:intron | 45.0% | |
| AAGATTAACACACCTCGGGT+GGG | + | chr3_3:83183072-83183091 | None:intergenic | 45.0% | |
| TGGGGAAGATTAACACACCT+CGG | + | chr3_3:83183077-83183096 | None:intergenic | 45.0% | |
| TGTATTGTGTCCCTGTGAGA+AGG | - | chr3_3:83183559-83183578 | Msa0478450:intron | 45.0% | |
| GTATTGTGTCCCTGTGAGAA+GGG | - | chr3_3:83183560-83183579 | Msa0478450:intron | 45.0% | |
| TATTGTGTCCCTGTGAGAAG+GGG | - | chr3_3:83183561-83183580 | Msa0478450:intron | 45.0% | |
| CATTATGGGCCTGTTTGGAT+TGG | + | chr3_3:83183945-83183964 | None:intergenic | 45.0% | |
| ! | ATTTTTCTTCCACCCACCCT+AGG | - | chr3_3:83184090-83184109 | Msa0478450:intron | 45.0% |
| GGGGAAGATTAACAACACCT+AGG | + | chr3_3:83184110-83184129 | None:intergenic | 45.0% | |
| AATGAGCCATGCTCGTTAGA+AGG | - | chr3_3:83184258-83184277 | Msa0478450:intron | 45.0% | |
| AGGAAGTGAATGAGGGAAGT+CGG | + | chr3_3:83184757-83184776 | None:intergenic | 45.0% | |
| CTTGCCTTCCAACATCATGA+TGG | + | chr3_3:83184892-83184911 | None:intergenic | 45.0% | |
| GAAACATGTAATCCGGACTC+AGG | + | chr3_3:83185067-83185086 | None:intergenic | 45.0% | |
| AGGCGAGGAAACATGTAATC+CGG | + | chr3_3:83185074-83185093 | None:intergenic | 45.0% | |
| ! | TGGTTTATTCGGTGATGACG+TGG | - | chr3_3:83185174-83185193 | Msa0478450:intron | 45.0% |
| CTATGCATCAATCACCGAGT+TGG | - | chr3_3:83185298-83185317 | Msa0478450:intron | 45.0% | |
| GGTAGGTCTTTGAACCAACT+CGG | + | chr3_3:83185315-83185334 | None:intergenic | 45.0% | |
| !! | TTCCGCTCGTTTTGTTAGCA+TGG | - | chr3_3:83185558-83185577 | Msa0478450:CDS | 45.0% |
| CACCATGCTAACAAAACGAG+CGG | + | chr3_3:83185563-83185582 | None:intergenic | 45.0% | |
| !! | GTTTTGTTAGCATGGTGGCA+AGG | - | chr3_3:83185566-83185585 | Msa0478450:CDS | 45.0% |
| AGAGGAAGGATAGTCTACAG+AGG | - | chr3_3:83185851-83185870 | Msa0478450:CDS | 45.0% | |
| !! | GTTGATGATCCCACTGAGAA+AGG | + | chr3_3:83185926-83185945 | None:intergenic | 45.0% |
| CACGGTGCAAAAACTCTTCT+AGG | + | chr3_3:83186139-83186158 | None:intergenic | 45.0% | |
| ! | CTAGAAGAGTTTTTGCACCG+TGG | - | chr3_3:83186137-83186156 | Msa0478450:intron | 45.0% |
| !! | TTTTTGCACCGTGGTTAGCT+GGG | - | chr3_3:83186146-83186165 | Msa0478450:intron | 45.0% |
| CAAACCTCAACAGTCTCAGA+AGG | + | chr3_3:83186196-83186215 | None:intergenic | 45.0% | |
| !! | CTTCTGAGACTGTTGAGGTT+TGG | - | chr3_3:83186194-83186213 | Msa0478450:intron | 45.0% |
| AGTGATAAACTCCTGAAGCC+AGG | - | chr3_3:83186480-83186499 | Msa0478450:CDS | 45.0% | |
| GCTACAACACTAATGTGACC+TGG | + | chr3_3:83186501-83186520 | None:intergenic | 45.0% | |
| CACATTAGTGTTGTAGCTGC+CGG | - | chr3_3:83186504-83186523 | Msa0478450:CDS | 45.0% | |
| GGATAGTAGAAGGATGAGAC+CGG | + | chr3_3:83186526-83186545 | None:intergenic | 45.0% | |
| ATTTGCCCGTAAAGGTTGAG+GGG | - | chr3_3:83186566-83186585 | Msa0478450:CDS | 45.0% | |
| !! | GTTATCAAAGCCTGCCGTTT+TGG | + | chr3_3:83186652-83186671 | None:intergenic | 45.0% |
| !! | TTCTGAAACTTTAGAGCGGC+AGG | - | chr3_3:83186680-83186699 | Msa0478450:CDS | 45.0% |
| !! | AAACTTTAGAGCGGCAGGTA+TGG | - | chr3_3:83186685-83186704 | Msa0478450:CDS | 45.0% |
| !! | AACTTTAGAGCGGCAGGTAT+GGG | - | chr3_3:83186686-83186705 | Msa0478450:CDS | 45.0% |
| CATCGAAAATCGATTGGGTC+TGG | + | chr3_3:83186741-83186760 | None:intergenic | 45.0% | |
| ! | CGCGTTTCTTCTGCTTGTTG+AGG | + | chr3_3:83180659-83180678 | None:intergenic | 50.0% |
| AAGAAACGCGGCATGGTGAA+AGG | - | chr3_3:83180669-83180688 | Msa0478450:three_prime_UTR | 50.0% | |
| TGAGGCGATCCTCAACCAAT+TGG | + | chr3_3:83180719-83180738 | None:intergenic | 50.0% | |
| !! | GAGGAGGAGAAGATTTGGTG+AGG | + | chr3_3:83180737-83180756 | None:intergenic | 50.0% |
| AGCTGGAGGAGGAGAAGATT+TGG | + | chr3_3:83180742-83180761 | None:intergenic | 50.0% | |
| GAGAAAGACGCGATCCAATG+CGG | + | chr3_3:83180796-83180815 | None:intergenic | 50.0% | |
| GTCGGTGGCATTAAGGTTGT+TGG | - | chr3_3:83180990-83181009 | Msa0478450:CDS | 50.0% | |
| CCATGTGTGAGTGTCAGTGT+CGG | - | chr3_3:83181244-83181263 | Msa0478450:intron | 50.0% | |
| TCTGCAAGGGTAAAAGGAGG+GGG | + | chr3_3:83181381-83181400 | None:intergenic | 50.0% | |
| GTCTGCAAGGGTAAAAGGAG+GGG | + | chr3_3:83181382-83181401 | None:intergenic | 50.0% | |
| CAGTCTGCAAGGGTAAAAGG+AGG | + | chr3_3:83181384-83181403 | None:intergenic | 50.0% | |
| ACTCCCTTCACAGTCTGCAA+GGG | + | chr3_3:83181394-83181413 | None:intergenic | 50.0% | |
| AACTCCCTTCACAGTCTGCA+AGG | + | chr3_3:83181395-83181414 | None:intergenic | 50.0% | |
| GATGCAAAAGCCCTGATCGA+CGG | - | chr3_3:83181912-83181931 | Msa0478450:intron | 50.0% | |
| AGCCCTGATCGACGGTAAAT+TGG | - | chr3_3:83181920-83181939 | Msa0478450:intron | 50.0% | |
| ! | AGCTCTAGCCCCTTGTCATA+GGG | + | chr3_3:83182367-83182386 | None:intergenic | 50.0% |
| !! | TAGCTCTAGCCCCTTGTCAT+AGG | + | chr3_3:83182368-83182387 | None:intergenic | 50.0% |
| TGACCTTGACAGTGAACTCG+TGG | + | chr3_3:83182665-83182684 | None:intergenic | 50.0% | |
| TCAAGGTCAACGATTGGGAG+AGG | - | chr3_3:83182676-83182695 | Msa0478450:intron | 50.0% | |
| CAAGGTCAACGATTGGGAGA+GGG | - | chr3_3:83182677-83182696 | Msa0478450:intron | 50.0% | |
| ! | ATTTTTCTTCCACCCACCCG+AGG | - | chr3_3:83183057-83183076 | Msa0478450:intron | 50.0% |
| GAAGATTAACACACCTCGGG+TGG | + | chr3_3:83183073-83183092 | None:intergenic | 50.0% | |
| GGGGAAGATTAACACACCTC+GGG | + | chr3_3:83183076-83183095 | None:intergenic | 50.0% | |
| TTAACAACACCTAGGGTGGG+TGG | + | chr3_3:83184102-83184121 | None:intergenic | 50.0% | |
| TGCACACCTTCTAACGAGCA+TGG | + | chr3_3:83184267-83184286 | None:intergenic | 50.0% | |
| AGAACATATGGCGCCACCAA+AGG | + | chr3_3:83184516-83184535 | None:intergenic | 50.0% | |
| TACAAGCCTGCAAAGTCGAC+TGG | - | chr3_3:83184829-83184848 | Msa0478450:intron | 50.0% | |
| TGTTGGAAGGCAAGTAAGCG+AGG | - | chr3_3:83184898-83184917 | Msa0478450:intron | 50.0% | |
| ! | TGCAGCACAAGTTGGGAAAC+AGG | + | chr3_3:83184944-83184963 | None:intergenic | 50.0% |
| GCATCAGCATCGTAACAAGG+TGG | + | chr3_3:83185404-83185423 | None:intergenic | 50.0% | |
| ! | AGGGCATCAGCATCGTAACA+AGG | + | chr3_3:83185407-83185426 | None:intergenic | 50.0% |
| TTGTTACGATGCTGATGCCC+TGG | - | chr3_3:83185406-83185425 | Msa0478450:intron | 50.0% | |
| !! | CGCTCGTTTTGTTAGCATGG+TGG | - | chr3_3:83185561-83185580 | Msa0478450:CDS | 50.0% |
| GAGAGAGAGAGAGAGAGAGT+AGG | + | chr3_3:83185638-83185657 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCT+CGG | - | chr3_3:83185639-83185658 | Msa0478450:intron | 50.0% | |
| GTAGTTCCACGTATGGAGAG+AGG | - | chr3_3:83185833-83185852 | Msa0478450:CDS | 50.0% | |
| TTCCACGTATGGAGAGAGGA+AGG | - | chr3_3:83185837-83185856 | Msa0478450:CDS | 50.0% | |
| ATCCTTCCTCTCTCCATACG+TGG | + | chr3_3:83185842-83185861 | None:intergenic | 50.0% | |
| TGGATTCCCATACCCTGGTT+TGG | - | chr3_3:83186049-83186068 | Msa0478450:intron | 50.0% | |
| ! | GTTTTTGCACCGTGGTTAGC+TGG | - | chr3_3:83186145-83186164 | Msa0478450:intron | 50.0% |
| ACATACGTCCCAGCTAACCA+CGG | + | chr3_3:83186157-83186176 | None:intergenic | 50.0% | |
| CACTAATGTGACCTGGCTTC+AGG | + | chr3_3:83186494-83186513 | None:intergenic | 50.0% | |
| CAAGCAGAAGAAACGCGGCA+TGG | - | chr3_3:83180662-83180681 | Msa0478450:three_prime_UTR | 55.0% | |
| !! | GGCATGGTGAAAGGCGTTGT+CGG | - | chr3_3:83180678-83180697 | Msa0478450:three_prime_UTR | 55.0% |
| ATCTTCTCCTCCTCCAGCTG+AGG | - | chr3_3:83180743-83180762 | Msa0478450:three_prime_UTR | 55.0% | |
| ATCAGTAGACCCACCTCAGC+TGG | + | chr3_3:83180759-83180778 | None:intergenic | 55.0% | |
| GCTGAGGTGGGTCTACTGAT+AGG | - | chr3_3:83180759-83180778 | Msa0478450:three_prime_UTR | 55.0% | |
| GCGGAATCATTGGGAGGAGT+TGG | + | chr3_3:83180831-83180850 | None:intergenic | 55.0% | |
| GGTTCAGCGGAATCATTGGG+AGG | + | chr3_3:83180837-83180856 | None:intergenic | 55.0% | |
| GCGGGTTCAGCGGAATCATT+GGG | + | chr3_3:83180840-83180859 | None:intergenic | 55.0% | |
| ! | AGCGGGTTCAGCGGAATCAT+TGG | + | chr3_3:83180841-83180860 | None:intergenic | 55.0% |
| ! | CTTATCGGGCTGGATGATGG+AGG | + | chr3_3:83180865-83180884 | None:intergenic | 55.0% |
| GGTTTCTGAACACGCTCGTC+AGG | - | chr3_3:83180953-83180972 | Msa0478450:CDS | 55.0% | |
| CCGACACTGACACTCACACA+TGG | + | chr3_3:83181247-83181266 | None:intergenic | 55.0% | |
| TGCAAGGGTAAAAGGAGGGG+GGG | + | chr3_3:83181379-83181398 | None:intergenic | 55.0% | |
| CTGCAAGGGTAAAAGGAGGG+GGG | + | chr3_3:83181380-83181399 | None:intergenic | 55.0% | |
| TCCCAGTTAACCTCCGAAGC+CGG | + | chr3_3:83181430-83181449 | None:intergenic | 55.0% | |
| TGACAGTGAACTCGTGGACG+AGG | + | chr3_3:83182659-83182678 | None:intergenic | 55.0% | |
| CGTCCACGAGTTCACTGTCA+AGG | - | chr3_3:83182659-83182678 | Msa0478450:intron | 55.0% | |
| AACGATTGGGAGAGGGAGCA+AGG | - | chr3_3:83182684-83182703 | Msa0478450:intron | 55.0% | |
| ACGATTGGGAGAGGGAGCAA+GGG | - | chr3_3:83182685-83182704 | Msa0478450:intron | 55.0% | |
| ATTAACACACCTCGGGTGGG+TGG | + | chr3_3:83183069-83183088 | None:intergenic | 55.0% | |
| AGCTGTAGCCCCTTCTCACA+GGG | + | chr3_3:83183572-83183591 | None:intergenic | 55.0% | |
| TAGCTGTAGCCCCTTCTCAC+AGG | + | chr3_3:83183573-83183592 | None:intergenic | 55.0% | |
| !! | GCAGCCTTCTGAGACTGTTG+AGG | - | chr3_3:83186189-83186208 | Msa0478450:intron | 55.0% |
| TTCTCCTCCTCCAGCTGAGG+TGG | - | chr3_3:83180746-83180765 | Msa0478450:three_prime_UTR | 60.0% | |
| TCTCCTCCTCCAGCTGAGGT+GGG | - | chr3_3:83180747-83180766 | Msa0478450:three_prime_UTR | 60.0% | |
| AGTAGACCCACCTCAGCTGG+AGG | + | chr3_3:83180756-83180775 | None:intergenic | 60.0% | |
| ! | GATGGAGGAAGCGGGTTCAG+CGG | + | chr3_3:83180850-83180869 | None:intergenic | 60.0% |
| !! | GGCTGGATGATGGAGGAAGC+GGG | + | chr3_3:83180858-83180877 | None:intergenic | 60.0% |
| !! | GGGCTGGATGATGGAGGAAG+CGG | + | chr3_3:83180859-83180878 | None:intergenic | 60.0% |
| AAGGGTAAAAGGAGGGGGGG+GGG | + | chr3_3:83181376-83181395 | None:intergenic | 60.0% | |
| CAAGGGTAAAAGGAGGGGGG+GGG | + | chr3_3:83181377-83181396 | None:intergenic | 60.0% | |
| GCAAGGGTAAAAGGAGGGGG+GGG | + | chr3_3:83181378-83181397 | None:intergenic | 60.0% | |
| ! | GCCGGCTTCGGAGGTTAACT+GGG | - | chr3_3:83181426-83181445 | Msa0478450:intron | 60.0% |
| AGAGGGAGCAAGGGCTTGTG+TGG | - | chr3_3:83182694-83182713 | Msa0478450:intron | 60.0% | |
| AGACCCACCTCAGCTGGAGG+AGG | + | chr3_3:83180753-83180772 | None:intergenic | 65.0% | |
| AGGGTAAAAGGAGGGGGGGG+GGG | + | chr3_3:83181375-83181394 | None:intergenic | 65.0% | |
| GGGAGTTGCTGAAGCAGCGC+CGG | - | chr3_3:83181408-83181427 | Msa0478450:intron | 65.0% | |
| !! | TGCTGAAGCAGCGCCGGCTT+CGG | - | chr3_3:83181414-83181433 | Msa0478450:intron | 65.0% |
| !! | CGCCGGCTTCGGAGGTTAAC+TGG | - | chr3_3:83181425-83181444 | Msa0478450:intron | 65.0% |
| TAAAAGGAGGGGGGGGGGGG+GGG | + | chr3_3:83181371-83181390 | None:intergenic | 70.0% | |
| GTAAAAGGAGGGGGGGGGGG+GGG | + | chr3_3:83181372-83181391 | None:intergenic | 70.0% | |
| GGTAAAAGGAGGGGGGGGGG+GGG | + | chr3_3:83181373-83181392 | None:intergenic | 70.0% | |
| GGGTAAAAGGAGGGGGGGGG+GGG | + | chr3_3:83181374-83181393 | None:intergenic | 70.0% | |
| !! | TGAAGCAGCGCCGGCTTCGG+AGG | - | chr3_3:83181417-83181436 | Msa0478450:intron | 70.0% |
| AAAAGGAGGGGGGGGGGGGG+GGG | + | chr3_3:83181370-83181389 | None:intergenic | 75.0% | |
| ! | AAAGGAGGGGGGGGGGGGGG+GGG | + | chr3_3:83181369-83181388 | None:intergenic | 80.0% |
| ! | AAGGAGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181368-83181387 | None:intergenic | 85.0% |
| ! | AGGAGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181367-83181386 | None:intergenic | 90.0% |
| ! | AGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181364-83181383 | None:intergenic | 95.0% |
| ! | GAGGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181365-83181384 | None:intergenic | 95.0% |
| ! | GGAGGGGGGGGGGGGGGGGG+GGG | + | chr3_3:83181366-83181385 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 83180549 | 83186918 | 83180549 | ID=Msa0478450;Name=Msa0478450 |
| chr3_3 | mRNA | 83180549 | 83186918 | 83180549 | ID=Msa0478450-mRNA-1;Parent=Msa0478450;Name=Msa0478450-mRNA-1;_AED=0.07;_eAED=0.07;_QI=132|1|1|1|1|1|9|334|489 |
| chr3_3 | exon | 83180549 | 83181176 | 83180549 | ID=Msa0478450-mRNA-1:exon:23290;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83181257 | 83181353 | 83181257 | ID=Msa0478450-mRNA-1:exon:23289;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83182495 | 83182649 | 83182495 | ID=Msa0478450-mRNA-1:exon:23288;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83182878 | 83182987 | 83182878 | ID=Msa0478450-mRNA-1:exon:23287;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83183134 | 83183218 | 83183134 | ID=Msa0478450-mRNA-1:exon:23286;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83185526 | 83185646 | 83185526 | ID=Msa0478450-mRNA-1:exon:23285;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83185743 | 83185871 | 83185743 | ID=Msa0478450-mRNA-1:exon:23284;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83185979 | 83186067 | 83185979 | ID=Msa0478450-mRNA-1:exon:23283;Parent=Msa0478450-mRNA-1 |
| chr3_3 | exon | 83186397 | 83186918 | 83186397 | ID=Msa0478450-mRNA-1:exon:23282;Parent=Msa0478450-mRNA-1 |
| chr3_3 | five_prime_UTR | 83186787 | 83186918 | 83186787 | ID=Msa0478450-mRNA-1:five_prime_utr;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83186397 | 83186786 | 83186397 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83185979 | 83186067 | 83185979 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83185743 | 83185871 | 83185743 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83185526 | 83185646 | 83185526 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83183134 | 83183218 | 83183134 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83182878 | 83182987 | 83182878 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83182495 | 83182649 | 83182495 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83181257 | 83181353 | 83181257 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | CDS | 83180883 | 83181176 | 83180883 | ID=Msa0478450-mRNA-1:cds;Parent=Msa0478450-mRNA-1 |
| chr3_3 | three_prime_UTR | 83180549 | 83180882 | 83180549 | ID=Msa0478450-mRNA-1:three_prime_utr;Parent=Msa0478450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
