AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0825240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825240 MtrunA17_Chr5g0446841 98.318 773 13 0 1 773 1 773 0.0 1530
Msa0825240 MtrunA17_Chr5g0429151 35.045 896 421 28 9 773 3 868 1.55e-106 346
Msa0825240 MtrunA17_Chr8g0343521 59.155 71 27 2 6 76 9 77 1.34e-17 87.8
Msa0825240 MtrunA17_Chr8g0343521 31.356 236 122 14 565 773 784 1006 3.67e-11 67.0
Msa0825240 MtrunA17_Chr8g0380271 41.758 91 47 3 1 89 1 87 2.45e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0825240 AT3G07660.1 36.701 485 216 17 371 773 366 841 1.23e-59 217
Msa0825240 AT3G07660.1 40.650 123 73 0 9 131 3 125 9.05e-19 92.0
Msa0825240 AT3G13222.1 44.366 142 65 3 5 145 3 131 7.80e-29 122
Msa0825240 AT3G13222.1 29.227 414 189 18 371 773 247 567 3.26e-15 80.1
Msa0825240 AT1G55820.1 29.962 524 280 20 279 773 110 575 9.30e-27 116
Msa0825240 AT1G55820.1 46.043 139 61 5 9 147 6 130 2.97e-26 114
Msa0825240 AT3G13990.1 27.719 285 167 10 1 271 2 261 1.06e-13 75.5
Msa0825240 AT3G13990.2 27.719 285 167 10 1 271 2 261 1.10e-13 75.5
Msa0825240 AT4G18150.1 36.029 136 70 6 7 130 2 132 1.05e-12 72.4

Find 259 sgRNAs with CRISPR-Local

Find 660 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAGCCGCGGCTGCAGCTGC+TGG 0.207112 5_3:-64956761 Msa0825240:CDS
GTGGTGGTGGTGGCGGGTCT+AGG 0.212056 5_3:-64963994 Msa0825240:CDS
TGCATTGGAGACAGGTAAAT+TGG 0.214964 5_3:+64956842 None:intergenic
CTCCGTGAGCAGCCTGTGTC+TGG 0.219809 5_3:+64956213 None:intergenic
CAGCAGTCTCAAGCTGTTGC+TGG 0.233033 5_3:-64956134 Msa0825240:CDS
CACTGCAGTATCTTCATTTC+CGG 0.236484 5_3:+64956601 None:intergenic
AATTTCATGTCTACCATGTT+AGG 0.248936 5_3:-64958417 Msa0825240:CDS
TTGAATTATACTGTTCTATA+TGG 0.260184 5_3:-64955640 Msa0825240:three_prime_UTR
GCTGGGCCAAATCATGTTAA+AGG 0.261520 5_3:-64960657 Msa0825240:CDS
GCAACAACTACATGTTTCTA+AGG 0.270655 5_3:+64955788 None:intergenic
AAGTCTGGTCACGGTTCTTC+TGG 0.281009 5_3:-64960981 Msa0825240:CDS
GGCCGCGGTGGTGGTGGTGG+CGG 0.286927 5_3:-64964001 Msa0825240:CDS
CACCGCCAACACCAGGAATC+TGG 0.293289 5_3:+64960715 None:intergenic
TGAAGGGTGCTGCTAGTTGC+AGG 0.295395 5_3:-64955872 Msa0825240:three_prime_UTR
CGGGTTGCTTGTTGAATTCA+TGG 0.297959 5_3:+64960578 None:intergenic
TTTGACTTTGGTATTGCATT+CGG 0.304863 5_3:+64960558 None:intergenic
CAAGTGCCTGAGGCTTTAAA+AGG 0.306095 5_3:-64959864 Msa0825240:CDS
TTGTTTCCTTTAACATGATT+TGG 0.306784 5_3:+64960651 None:intergenic
CTTCCTATTCGAAGGGAAAA+TGG 0.306891 5_3:-64961603 Msa0825240:CDS
GCATTCACTGAAGAAGATTC+AGG 0.317221 5_3:+64959753 None:intergenic
GTTCAAAGTGCTCAAAACTA+TGG 0.320477 5_3:-64958444 Msa0825240:CDS
CCATCTATCTCCCAGATTCC+TGG 0.331270 5_3:-64960726 Msa0825240:CDS
CTGTAGAGGTGGAGTTGGGC+TGG 0.331789 5_3:+64956952 None:intergenic
TCTTCTGGCCAATCTCTTAT+AGG 0.333528 5_3:-64960966 Msa0825240:CDS
GGCTATTCCTCAAACTTTCC+TGG 0.336120 5_3:-64962093 Msa0825240:intron
AACATGTAGTTGTTGCTATA+AGG 0.340815 5_3:-64955781 Msa0825240:three_prime_UTR
TCGCTCCAGCCTTGAATTGC+GGG 0.342458 5_3:+64956723 None:intergenic
ATTTGAGGGTAGTGAGCTTC+AGG 0.344869 5_3:-64958379 Msa0825240:CDS
CCTAGTCCGACCGTGAATAC+TGG 0.345879 5_3:-64956632 Msa0825240:CDS
AAATTACAACCTTGAGGCTT+GGG 0.350670 5_3:+64961506 None:intergenic
CCAGCAGCTGCAGCCGCGGC+TGG 0.355020 5_3:+64956761 None:intergenic
TTAAAAGGTGGTCTGACATT+TGG 0.355222 5_3:-64959849 Msa0825240:CDS
GGCTCATATTGGAATTCCTT+CGG 0.356484 5_3:-64956687 Msa0825240:CDS
TGGAGCGAACACAGGAAATA+TGG 0.359123 5_3:-64956708 Msa0825240:CDS
ACTCAAAAGCTTCTCTATCT+AGG 0.361121 5_3:-64963848 Msa0825240:intron
TGCTAGATGGTGGTGGTGGT+GGG 0.362600 5_3:-64961632 Msa0825240:intron
AGGCCAGTGTTCATTCTTCA+TGG 0.365615 5_3:+64955971 None:intergenic
ATCAAGATGATCTCCGTGTT+CGG 0.367141 5_3:+64958602 None:intergenic
TTGACTTTGGTATTGCATTC+GGG 0.371451 5_3:+64960559 None:intergenic
GCACTTTGAACAGTCAGAAT+TGG 0.377482 5_3:+64958456 None:intergenic
ATGCTGAAACTGTTAATTCA+AGG 0.379384 5_3:-64959734 Msa0825240:intron
AGCGGCGGCCGCGGTGGTGG+TGG 0.379951 5_3:-64964007 Msa0825240:CDS
GCATTGGAGACAGGTAAATT+GGG 0.381244 5_3:+64956843 None:intergenic
ACAGGAAATATGGCTCATAT+TGG 0.381667 5_3:-64956698 Msa0825240:CDS
CACCAACTCTATTGAACTCT+TGG 0.383167 5_3:+64955726 None:intergenic
TTGCTAGATGGTGGTGGTGG+TGG 0.383397 5_3:-64961633 Msa0825240:intron
GCCGCGGTGGTGGTGGTGGC+GGG 0.386945 5_3:-64964000 Msa0825240:CDS
TCAGGCACTTGGAAATGGTT+TGG 0.399267 5_3:+64959876 None:intergenic
GAAACGGGCTGTGGAGAAAC+AGG 0.403673 5_3:+64956920 None:intergenic
GTTGTCCAGTTGTATAGATC+TGG 0.403934 5_3:+64956561 None:intergenic
AAGCCTCAGGCACTTGGAAA+TGG 0.404582 5_3:+64959871 None:intergenic
TCTGAAGGCATATCTATAAC+TGG 0.405546 5_3:-64958537 Msa0825240:CDS
GTTCCCTCTCCCGCAATTCA+AGG 0.408553 5_3:-64956732 Msa0825240:CDS
TTCCTCTTCAGATCCTGTGC+TGG 0.408962 5_3:-64960751 Msa0825240:CDS
GTTGCAAACCGGACATATCT+TGG 0.409196 5_3:+64956285 None:intergenic
TCAAGATGATCTCCGTGTTC+GGG 0.409737 5_3:+64958603 None:intergenic
CTTTCAACTTCATTTGACTT+TGG 0.410792 5_3:+64960546 None:intergenic
CAAATGAAGTTGAAAGTAAC+CGG 0.414132 5_3:-64960539 Msa0825240:CDS
GATCTATACAACTGGACAAC+TGG 0.415174 5_3:-64956558 Msa0825240:intron
AGGTGGTTGGCTAACGCAAC+TGG 0.415387 5_3:+64960473 None:intergenic
GGCGGCCGCGGTGGTGGTGG+TGG 0.416006 5_3:-64964004 Msa0825240:CDS
GCTCATATTGGAATTCCTTC+GGG 0.416308 5_3:-64956686 Msa0825240:CDS
CCAGTATTCACGGTCGGACT+AGG 0.420427 5_3:+64956632 None:intergenic
TGTAGAGGTGGAGTTGGGCT+GGG 0.425157 5_3:+64956953 None:intergenic
GAAAACCAGATCTATACAAC+TGG 0.430421 5_3:-64956566 Msa0825240:CDS
ATGAGCGGCGGCCGCGGTGG+TGG 0.430580 5_3:-64964010 Msa0825240:CDS
CATTGTAGGGATTGAGCAGC+AGG 0.430709 5_3:-64962179 Msa0825240:intron
AGCAGTCTCAAGCTGTTGCT+GGG 0.433556 5_3:-64956133 Msa0825240:CDS
GCTGCTCACGGAGCATTTCC+CGG 0.434441 5_3:-64956203 Msa0825240:CDS
AATCAATCCAATGGGAAGTC+TGG 0.436871 5_3:-64960996 Msa0825240:CDS
GGCGGGCCTACAGTTTCAAC+AGG 0.437990 5_3:+64956110 None:intergenic
CAGCCGCGGCTGCAGCTGCT+GGG 0.442511 5_3:-64956760 Msa0825240:CDS
CAGCTTGAGACTGCTGCAAA+AGG 0.443273 5_3:+64956141 None:intergenic
GAAATTACAACCTTGAGGCT+TGG 0.445152 5_3:+64961505 None:intergenic
AGTTGAGACCTCTGTGACAT+TGG 0.448927 5_3:+64959947 None:intergenic
GACTGCTGCAAAAGGGTAGA+AGG 0.449419 5_3:+64956149 None:intergenic
AGCTCTGTAGAGGTGGAGTT+GGG 0.449566 5_3:+64956948 None:intergenic
GTTAACAATACCTCCTGCTT+TGG 0.450263 5_3:+64958492 None:intergenic
TACCGCCTTCTCAGATCAAT+TGG 0.451052 5_3:-64956067 Msa0825240:CDS
AAAATTGATGCATTGGAGAC+AGG 0.452279 5_3:+64956834 None:intergenic
CTGCCCTGGTTGATAGATAC+CGG 0.454716 5_3:+64956184 None:intergenic
TGGTGGTGGTGGCGGGTCTA+GGG 0.455666 5_3:-64963993 Msa0825240:CDS
TCCGTGAGCAGCCTGTGTCT+GGG 0.456000 5_3:+64956214 None:intergenic
TGTTATTTACACTTCAGATC+AGG 0.456134 5_3:+64955951 None:intergenic
GGATTGATTTGCAGCACTAC+GGG 0.459068 5_3:+64961010 None:intergenic
GCTATCAAAATGTAGTATAC+AGG 0.460500 5_3:+64955671 None:intergenic
GTTGCAAGGGCTCAGATAAC+CGG 0.463340 5_3:+64960520 None:intergenic
ATTGCAGACTGCAAGTTCTC+AGG 0.466939 5_3:-64956984 Msa0825240:intron
CCAGCTAACTTCTTCCCATA+TGG 0.466958 5_3:-64956878 Msa0825240:CDS
TAGATCAAAACAACGTGGAC+AGG 0.467933 5_3:-64962142 Msa0825240:CDS
TTCCGTACATTGTTGGGGAT+CGG 0.469554 5_3:+64963968 None:intergenic
CTATATAACCTTGCCCCTCA+AGG 0.469727 5_3:-64956254 Msa0825240:CDS
GGGAGTGACCGGATATCTGC+TGG 0.471503 5_3:-64960675 Msa0825240:CDS
CAACACTACCTATAAGAGAT+TGG 0.475576 5_3:+64960958 None:intergenic
ATTTCATGTCTACCATGTTA+GGG 0.475944 5_3:-64958416 Msa0825240:CDS
TTAGAAGCTGAACTACTTTG+TGG 0.481163 5_3:+64960927 None:intergenic
CCATATGGGAAGAAGTTAGC+TGG 0.481888 5_3:+64956878 None:intergenic
CCAGCCTTGAATTGCGGGAG+AGG 0.483908 5_3:+64956728 None:intergenic
CCAGGAATCTGGGAGATAGA+TGG 0.484625 5_3:+64960726 None:intergenic
TTCGCTCCAGCCTTGAATTG+CGG 0.486110 5_3:+64956722 None:intergenic
TAGAAGCTGAACTACTTTGT+GGG 0.486686 5_3:+64960928 None:intergenic
GTTCGGGCAATGGTGCGCTT+TGG 0.486927 5_3:+64958619 None:intergenic
TGGTGGCCTAAAATAAGAAA+CGG 0.489748 5_3:+64956904 None:intergenic
TGGATTGATTTGCAGCACTA+CGG 0.490684 5_3:+64961009 None:intergenic
TCCCAGATTCCTGGTGTTGG+CGG 0.494415 5_3:-64960717 Msa0825240:CDS
GATTTGGCCCAGCAGATATC+CGG 0.495485 5_3:+64960667 None:intergenic
GAGCTCTGTAGAGGTGGAGT+TGG 0.496736 5_3:+64956947 None:intergenic
GTCAGAATTGGATGGCCCTC+GGG 0.498580 5_3:+64958468 None:intergenic
GTGAATACTGGAAGCTCTGC+CGG 0.500908 5_3:-64956620 Msa0825240:CDS
GAAAGAATGAGCGGCGGCCG+CGG 0.501038 5_3:-64964016 Msa0825240:exon
CATGTTTGATTCTTTAAGAA+CGG 0.501860 5_3:+64963886 None:intergenic
TGGCTTAGTATAATATCATC+AGG 0.502004 5_3:+64955746 None:intergenic
GGACCCGGACTTATCATTCT+CGG 0.502645 5_3:+64960599 None:intergenic
TTGGTCAGTTCTTGTAATTG+AGG 0.502651 5_3:+64960827 None:intergenic
AGTTCTTGTAATTGAGGCAA+AGG 0.505006 5_3:+64960833 None:intergenic
ATCTCCCAGATTCCTGGTGT+TGG 0.505270 5_3:-64960720 Msa0825240:CDS
CTCTTGCTAGATGGTGGTGG+TGG 0.506078 5_3:-64961636 Msa0825240:intron
AAAACAACGTGGACAGGGGA+GGG 0.506744 5_3:-64962136 Msa0825240:CDS
TTCCCTCAACAGCCATCAGC+TGG 0.506755 5_3:-64956797 Msa0825240:CDS
GAGATAGATGGTGCCAGCAC+AGG 0.507181 5_3:+64960738 None:intergenic
TCAACATCAAATTTCTGTAC+CGG 0.510047 5_3:-64960781 Msa0825240:CDS
AAGGTGAGATGTTGCCCTTG+AGG 0.511656 5_3:+64956239 None:intergenic
AGGTGAGATGTTGCCCTTGA+GGG 0.513539 5_3:+64956240 None:intergenic
GCTGATAAGATCCTGGAGGC+GGG 0.514023 5_3:+64956093 None:intergenic
TAGAGAATTAAGTTGCAAAC+CGG 0.515652 5_3:+64956274 None:intergenic
CCTCTCCCGCAATTCAAGGC+TGG 0.516531 5_3:-64956728 Msa0825240:CDS
CCGTGAGCAGCCTGTGTCTG+GGG 0.517112 5_3:+64956215 None:intergenic
GATCCCAGCAGCTGCAGCCG+CGG 0.517466 5_3:+64956757 None:intergenic
AAAGATTGAGCAGCCAAAGC+AGG 0.517956 5_3:-64958505 Msa0825240:CDS
AAACAACGTGGACAGGGGAG+GGG 0.518758 5_3:-64962135 Msa0825240:CDS
TTCCGATCCCCAACAATGTA+CGG 0.520407 5_3:-64963970 Msa0825240:CDS
ATTGAGGCAAAGGTTTGAGT+AGG 0.520561 5_3:+64960843 None:intergenic
GCATCCGAGAATGATAAGTC+CGG 0.521679 5_3:-64960603 Msa0825240:CDS
GGTGGCCTAAAATAAGAAAC+GGG 0.522599 5_3:+64956905 None:intergenic
ACTCAGCAAGTTCAATTTGA+GGG 0.523341 5_3:-64958393 Msa0825240:CDS
CAACAACTACATGTTTCTAA+GGG 0.523616 5_3:+64955789 None:intergenic
ACCGCCAACACCAGGAATCT+GGG 0.523803 5_3:+64960716 None:intergenic
ATTGAGCAGCAGGGTTTCTG+AGG 0.524138 5_3:-64962169 Msa0825240:CDS
GGAAACAAACTTGAAGAAGC+TGG 0.524687 5_3:-64960636 Msa0825240:CDS
GGGAAGAAGTTAGCTGGGTA+TGG 0.526076 5_3:+64956884 None:intergenic
TGCTGATAAGATCCTGGAGG+CGG 0.526275 5_3:+64956092 None:intergenic
AAACTTTACCTTGAGGTGGT+TGG 0.528234 5_3:+64960460 None:intergenic
TGATCTCCGTGTTCGGGCAA+TGG 0.528800 5_3:+64958609 None:intergenic
AGAATGAGCGGCGGCCGCGG+TGG 0.530461 5_3:-64964013 Msa0825240:CDS
GCTGGGCCTGTTGAAACTGT+AGG 0.532568 5_3:-64956116 Msa0825240:CDS
GGACTAGGAGCATATCCAAC+AGG 0.533992 5_3:+64956647 None:intergenic
GATCTCTCTGATGTCGTGGA+TGG 0.534492 5_3:+64963943 None:intergenic
GGTGCTGTCAGTAAGGAAGT+AGG 0.535012 5_3:-64960696 Msa0825240:CDS
TTATTTAATTAAAGAGACAC+TGG 0.535996 5_3:-64958562 Msa0825240:CDS
CCCCAGACACAGGCTGCTCA+CGG 0.537435 5_3:-64956215 Msa0825240:CDS
GAAACTGTAGGCCCGCCTCC+AGG 0.540189 5_3:-64956104 Msa0825240:CDS
CTAAAATAAGAAACGGGCTG+TGG 0.541113 5_3:+64956911 None:intergenic
GAATTCCAATTGATCTGAGA+AGG 0.541172 5_3:+64956062 None:intergenic
AGTCAGAATTGGATGGCCCT+CGG 0.541571 5_3:+64958467 None:intergenic
AAAGGTTTGAGTAGGAGAAG+TGG 0.542499 5_3:+64960851 None:intergenic
AATATCATCAGGAATTACTA+AGG 0.542667 5_3:+64955757 None:intergenic
GACTCAGCAAGTTCAATTTG+AGG 0.543960 5_3:-64958394 Msa0825240:CDS
GTGCTGCAAATCAATCCAAT+GGG 0.544641 5_3:-64961004 Msa0825240:CDS
AAATGTACCAGGAAAGTTTG+AGG 0.546172 5_3:+64962086 None:intergenic
TCATATATCACTCCACCTGT+TGG 0.546789 5_3:-64956662 Msa0825240:CDS
GATGTTGCCCTTGAGGGGCA+AGG 0.549942 5_3:+64956246 None:intergenic
GAGTTCTCTCTGCAATGTGA+TGG 0.550044 5_3:+64961577 None:intergenic
AGCCAAGAGTTCAATAGAGT+TGG 0.550760 5_3:-64955728 Msa0825240:three_prime_UTR
CAAAACAACGTGGACAGGGG+AGG 0.551743 5_3:-64962137 Msa0825240:CDS
CGGTGATCTCTCTGATGTCG+TGG 0.555061 5_3:+64963939 None:intergenic
AGCTTGAGACTGCTGCAAAA+GGG 0.555438 5_3:+64956142 None:intergenic
GGCAGAGCTTCCAGTATTCA+CGG 0.556493 5_3:+64956622 None:intergenic
GCTTGTTGAATTCATGGACC+CGG 0.556640 5_3:+64960584 None:intergenic
GAGGAACTTACAACAAAGGA+AGG 0.557950 5_3:+64958336 None:intergenic
AGTGCTGCAAATCAATCCAA+TGG 0.560942 5_3:-64961005 Msa0825240:CDS
GTAAGGAAGTAGGGAGTGAC+CGG 0.561882 5_3:-64960686 Msa0825240:CDS
CAACATCAAATTTCTGTACC+GGG 0.562172 5_3:-64960780 Msa0825240:CDS
CTGTAAATCTGGCTGAGTAG+AGG 0.562674 5_3:+64961548 None:intergenic
AAACCGGACATATCTTGGCC+TGG 0.562751 5_3:+64956290 None:intergenic
GGAGGAACCTTCCTATTCGA+AGG 0.562842 5_3:-64961611 Msa0825240:CDS
TTCAAGGCTGGAGCGAACAC+AGG 0.563651 5_3:-64956716 Msa0825240:CDS
GGTAGCTGCTGATAAGATCC+TGG 0.567965 5_3:+64956086 None:intergenic
CTCAACTCAGTTGACTGCAC+AGG 0.568411 5_3:+64959915 None:intergenic
GCACCAGGCCAAGATATGTC+CGG 0.568756 5_3:-64956293 Msa0825240:CDS
AACTACATGTTTCTAAGGGG+GGG 0.569313 5_3:+64955793 None:intergenic
AGCGCACCATTGCCCGAACA+CGG 0.569960 5_3:-64958615 Msa0825240:CDS
CGTTCTTAAAGAATCAAACA+TGG 0.570146 5_3:-64963885 Msa0825240:CDS
ACTGAAGAAGATTCAGGAGT+GGG 0.570709 5_3:+64959759 None:intergenic
GGTATAGAGCTCTGTAGAGG+TGG 0.570730 5_3:+64956941 None:intergenic
TTACCAGCTGATGGCTGTTG+AGG 0.571228 5_3:+64956794 None:intergenic
CGTGAGCAGCCTGTGTCTGG+GGG 0.572469 5_3:+64956216 None:intergenic
CAGCCTTGAATTGCGGGAGA+GGG 0.573024 5_3:+64956729 None:intergenic
GTGCTGTCAGTAAGGAAGTA+GGG 0.573090 5_3:-64960695 Msa0825240:CDS
GGACAGGGGAGGGGAGCAAG+AGG 0.576708 5_3:-64962126 Msa0825240:CDS
TATATAACCTTGCCCCTCAA+GGG 0.576839 5_3:-64956253 Msa0825240:CDS
AACAACTACATGTTTCTAAG+GGG 0.576952 5_3:+64955790 None:intergenic
CTGACAGCACCGCCAACACC+AGG 0.577823 5_3:+64960708 None:intergenic
ATGCAGCACCCCAAGCCTCA+AGG 0.578939 5_3:-64961515 Msa0825240:intron
CATCCGAGAATGATAAGTCC+GGG 0.582263 5_3:-64960602 Msa0825240:CDS
TACCAGCTGATGGCTGTTGA+GGG 0.584622 5_3:+64956795 None:intergenic
AGATCAAAACAACGTGGACA+GGG 0.589207 5_3:-64962141 Msa0825240:CDS
GGAGGTATTGTTAACTCCCG+AGG 0.592527 5_3:-64958484 Msa0825240:CDS
TGTTGGCGGTGCTGTCAGTA+AGG 0.598294 5_3:-64960703 Msa0825240:CDS
GGTGAAGCTACTGTCTGCCC+TGG 0.598871 5_3:+64956170 None:intergenic
AAAGAGACACTGGCTTCTGA+AGG 0.600009 5_3:-64958552 Msa0825240:CDS
AAGAAGTTAGCTGGGTATGG+TGG 0.600041 5_3:+64956887 None:intergenic
TTTCCCGGTATCTATCAACC+AGG 0.601306 5_3:-64956188 Msa0825240:CDS
AACGGAGAAGATTTCGTCGT+CGG 0.601528 5_3:+64963904 None:intergenic
AAACCATTTCCAAGTGCCTG+AGG 0.602183 5_3:-64959874 Msa0825240:CDS
AATTACAACCTTGAGGCTTG+GGG 0.602227 5_3:+64961507 None:intergenic
TGCCCTGGTTGATAGATACC+GGG 0.602438 5_3:+64956185 None:intergenic
TGCGTTAGCCAACCACCTCA+AGG 0.605206 5_3:-64960468 Msa0825240:intron
TCCAATGGGAAGTCTGGTCA+CGG 0.605345 5_3:-64960990 Msa0825240:CDS
CATATGGGAAGAAGTTAGCT+GGG 0.606074 5_3:+64956879 None:intergenic
TTTGAACAGTCAGAATTGGA+TGG 0.606885 5_3:+64958460 None:intergenic
CATCTCTTGCTAGATGGTGG+TGG 0.607034 5_3:-64961639 Msa0825240:intron
CAACTACATGTTTCTAAGGG+GGG 0.609652 5_3:+64955792 None:intergenic
GATTGAGCAGCCAAAGCAGG+AGG 0.610604 5_3:-64958502 Msa0825240:CDS
ACCGTGACCAGACTTCCCAT+TGG 0.611137 5_3:+64960989 None:intergenic
CTGTGCAGTCAACTGAGTTG+AGG 0.612178 5_3:-64959914 Msa0825240:CDS
GAAGACGATGAGAGTTGCAA+GGG 0.616553 5_3:+64960507 None:intergenic
AATCCATGAAGAATGAACAC+TGG 0.617265 5_3:-64955974 Msa0825240:three_prime_UTR
TGAAGACGATGAGAGTTGCA+AGG 0.618276 5_3:+64960506 None:intergenic
GGTGAGATGTTGCCCTTGAG+GGG 0.619566 5_3:+64956241 None:intergenic
CATTGGAGACAGGTAAATTG+GGG 0.621229 5_3:+64956844 None:intergenic
GTGCCTGAGGCTTTAAAAGG+TGG 0.624955 5_3:-64959861 Msa0825240:CDS
GATGGAGGAACTTACAACAA+AGG 0.635043 5_3:+64958332 None:intergenic
GGAGTGACCGGATATCTGCT+GGG 0.642640 5_3:-64960674 Msa0825240:CDS
CACTGAAGAAGATTCAGGAG+TGG 0.642648 5_3:+64959758 None:intergenic
GAGCTTCCAGTATTCACGGT+CGG 0.642719 5_3:+64956626 None:intergenic
ACAGGTATAGAGCTCTGTAG+AGG 0.643476 5_3:+64956938 None:intergenic
ACAACTACATGTTTCTAAGG+GGG 0.647835 5_3:+64955791 None:intergenic
CACGACATCAGAGAGATCAC+CGG 0.648780 5_3:-64963938 Msa0825240:CDS
ACAACAAAGGAAGGGAAGTG+TGG 0.650206 5_3:+64958345 None:intergenic
TGAAGTGTAAATAACAAATG+CGG 0.652445 5_3:-64955944 Msa0825240:three_prime_UTR
CTAGGAGCATATCCAACAGG+TGG 0.652618 5_3:+64956650 None:intergenic
GAGGAACCTTCCTATTCGAA+GGG 0.652976 5_3:-64961610 Msa0825240:CDS
AGATACATGTTACCAGCTGA+TGG 0.653734 5_3:+64956785 None:intergenic
AACTTGCTGAGTCCCTAACA+TGG 0.655137 5_3:+64958404 None:intergenic
TGCCAGCACAGGATCTGAAG+AGG 0.656250 5_3:+64960749 None:intergenic
GCTGCAACAACAACAGCTTG+AGG 0.660568 5_3:+64960876 None:intergenic
GCTGTGTGGATACATGCACC+AGG 0.661823 5_3:-64956308 Msa0825240:CDS
TCTGAAGAGGAACAAACACC+CGG 0.663195 5_3:+64960762 None:intergenic
ATTGTAGGGATTGAGCAGCA+GGG 0.668215 5_3:-64962178 Msa0825240:intron
TTCCAATTGATCTGAGAAGG+CGG 0.672381 5_3:+64956065 None:intergenic
ACCCGCCACCACCACCACCG+CGG 0.677659 5_3:+64963999 None:intergenic
TTGGAGACAGGTAAATTGGG+GGG 0.679905 5_3:+64956846 None:intergenic
TCTCTCTCTGAAAGAATGAG+CGG 0.679913 5_3:-64964025 Msa0825240:exon
GAGGTATTGTTAACTCCCGA+GGG 0.680947 5_3:-64958483 Msa0825240:CDS
GATTGATTTGCAGCACTACG+GGG 0.681379 5_3:+64961011 None:intergenic
TCAATTACAAGAACTGACCA+AGG 0.681707 5_3:-64960825 Msa0825240:CDS
GATCAAAACAACGTGGACAG+GGG 0.696924 5_3:-64962140 Msa0825240:CDS
ATACAGGTGAGAATTGAGAA+CGG 0.696993 5_3:+64955687 None:intergenic
AGGAACTTACAACAAAGGAA+GGG 0.699468 5_3:+64958337 None:intergenic
CTCTCTGAAAGAATGAGCGG+CGG 0.701991 5_3:-64964022 Msa0825240:exon
TTCCCGGTATCTATCAACCA+GGG 0.707077 5_3:-64956187 Msa0825240:CDS
TAACATGTATCTACCAGCCG+CGG 0.707923 5_3:-64956774 Msa0825240:CDS
AGAGTGAAGGCTCTGCTGTG+TGG 0.711840 5_3:-64956322 Msa0825240:CDS
AGCTGCTGATAAGATCCTGG+AGG 0.720533 5_3:+64956089 None:intergenic
ATTGGAGACAGGTAAATTGG+GGG 0.735261 5_3:+64956845 None:intergenic
TAAAACAGCCAATGTCACAG+AGG 0.735538 5_3:-64959955 Msa0825240:CDS
GCTGTTGAGGGAAACCATTG+TGG 0.747524 5_3:+64956807 None:intergenic
GGAGTGATATATGATCCCGA+AGG 0.756582 5_3:+64956671 None:intergenic
GAGTCTAGATCAAAACAACG+TGG 0.798909 5_3:-64962147 Msa0825240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATCTCATAAATTATTTT+AGG + chr5_3:64957810-64957829 None:intergenic 10.0%
!! ATTATAAGAAAATATAATAG+CGG - chr5_3:64958253-64958272 Msa0825240:intron 10.0%
!!! AAAATTAATAACAGAATTTT+AGG + chr5_3:64959639-64959658 None:intergenic 10.0%
!! TGGATTAATAATTAAATATA+AGG + chr5_3:64962621-64962640 None:intergenic 10.0%
!!! TATTTATTTTTTGAAGAAAT+AGG + chr5_3:64963208-64963227 None:intergenic 10.0%
!!! TATATTTATTTTTATTTTCG+AGG - chr5_3:64963851-64963870 Msa0825240:CDS 10.0%
!!! AGCAAAATATAAATTGTTTT+TGG - chr5_3:64956498-64956517 Msa0825240:intron 15.0%
!! ATAAACATCAGAAAAAATTA+TGG + chr5_3:64957468-64957487 None:intergenic 15.0%
!! ATTTCTTTATAAGATTTAAC+AGG + chr5_3:64959273-64959292 None:intergenic 15.0%
!!! TTTTTTTTTTCCTTACATTT+TGG - chr5_3:64960443-64960462 Msa0825240:intron 15.0%
!!! TTTTTTTTTCCTTACATTTT+GGG - chr5_3:64960444-64960463 Msa0825240:intron 15.0%
!! AAAATGCAAAATTAAACTTA+GGG + chr5_3:64962130-64962149 None:intergenic 15.0%
!! TTAATTATTAATCCATTTGT+TGG - chr5_3:64962626-64962645 Msa0825240:intron 15.0%
!!! CAATTTTTTATTGAAATACT+TGG - chr5_3:64963298-64963317 Msa0825240:intron 15.0%
!!! TAATTTCTTTTCTCATTTTT+TGG + chr5_3:64963779-64963798 None:intergenic 15.0%
!!! TTTACTGTTTTCTTGATTTA+AGG - chr5_3:64956035-64956054 Msa0825240:exon 20.0%
!!! TTACTGTTTTCTTGATTTAA+GGG - chr5_3:64956036-64956055 Msa0825240:exon 20.0%
!!! TTTTTTTATTGTGTAATGCT+TGG - chr5_3:64956390-64956409 Msa0825240:intron 20.0%
!! ATGTTAAAAGCTTACAAAAT+GGG - chr5_3:64956443-64956462 Msa0825240:intron 20.0%
!! AATACTAAGAACTAACATTA+GGG + chr5_3:64956961-64956980 None:intergenic 20.0%
!! AAATACTAAGAACTAACATT+AGG + chr5_3:64956962-64956981 None:intergenic 20.0%
!!! CATATCGAGTTTTTTAAAAA+TGG + chr5_3:64957106-64957125 None:intergenic 20.0%
!! ATATGCAATACAATTTAAGT+TGG - chr5_3:64957121-64957140 Msa0825240:intron 20.0%
!! TTTAATTGCATTTGAAAGTT+AGG - chr5_3:64957155-64957174 Msa0825240:intron 20.0%
!! AGTTAAAAACAAATCAGTTA+CGG + chr5_3:64957494-64957513 None:intergenic 20.0%
!!! TAACTGATTTGTTTTTAACT+TGG - chr5_3:64957494-64957513 Msa0825240:intron 20.0%
!!! ACATTTTTCATACTTTTTAG+AGG - chr5_3:64957628-64957647 Msa0825240:intron 20.0%
!!! ATCTCATAAATTATTTTAGG+AGG + chr5_3:64957807-64957826 None:intergenic 20.0%
!! GAAATTAAAGTATAATTCTC+AGG + chr5_3:64957843-64957862 None:intergenic 20.0%
!! TCATCTTGATTGATTAAAAA+GGG + chr5_3:64957890-64957909 None:intergenic 20.0%
!! TTCATCTTGATTGATTAAAA+AGG + chr5_3:64957891-64957910 None:intergenic 20.0%
!! TTGAACGTTATATTTGTAAA+AGG + chr5_3:64958464-64958483 None:intergenic 20.0%
!! TTTATAAGATTTAACAGGTA+TGG + chr5_3:64959268-64959287 None:intergenic 20.0%
!!! CTTTTCTGAAGATATTTTAA+GGG - chr5_3:64959497-64959516 Msa0825240:intron 20.0%
!! TAGAGAAAAATCAAAAAGAA+TGG + chr5_3:64959673-64959692 None:intergenic 20.0%
!! TAAAACATACTGTAAGAATT+TGG - chr5_3:64960178-64960197 Msa0825240:intron 20.0%
!!! ATAGTTTTTTGTGTTTTCTT+TGG - chr5_3:64960204-64960223 Msa0825240:intron 20.0%
!! TATATTAAACCTCTTCATTA+AGG - chr5_3:64960477-64960496 Msa0825240:CDS 20.0%
!! TAATCCTCCTATTATAAAAA+AGG - chr5_3:64960991-64961010 Msa0825240:CDS 20.0%
!!! TGATCTTCCTTTTTTATAAT+AGG + chr5_3:64961001-64961020 None:intergenic 20.0%
!! TTATTTAATTAAAGAGACAC+TGG - chr5_3:64961135-64961154 Msa0825240:intron 20.0%
!! AAATCTTAAGAAATACATGA+TGG + chr5_3:64961386-64961405 None:intergenic 20.0%
!! AAAGATAGTATTAAGACATA+GGG + chr5_3:64961441-64961460 None:intergenic 20.0%
!! AAAAGATAGTATTAAGACAT+AGG + chr5_3:64961442-64961461 None:intergenic 20.0%
!!! ATGTCTTAATACTATCTTTT+TGG - chr5_3:64961442-64961461 Msa0825240:intron 20.0%
!!! TAATACTATCTTTTTGGTTT+CGG - chr5_3:64961448-64961467 Msa0825240:intron 20.0%
!! CAAAATGCAAAATTAAACTT+AGG + chr5_3:64962131-64962150 None:intergenic 20.0%
!!! CTTTAAGTTTATTCTTTGTA+AGG + chr5_3:64962244-64962263 None:intergenic 20.0%
!! CTTACAAAGAATAAACTTAA+AGG - chr5_3:64962242-64962261 Msa0825240:intron 20.0%
!!! CTTTAAGTTTATTCTTTGTA+AGG + chr5_3:64962244-64962263 None:intergenic 20.0%
!! GAATAAACTTAAAGAATGTA+AGG - chr5_3:64962426-64962445 Msa0825240:intron 20.0%
!! ACTTAAGTTTATTCTTTGTA+AGG + chr5_3:64962462-64962481 None:intergenic 20.0%
!!! CAATTGGAATTCTAATTTTT+AGG - chr5_3:64963646-64963665 Msa0825240:intron 20.0%
!!! ATATGTGCATTTTAACAATA+TGG + chr5_3:64963693-64963712 None:intergenic 20.0%
!!! AAGAAATTAGTAACTGTTTT+TGG - chr5_3:64963790-64963809 Msa0825240:intron 20.0%
!! TTGAATTATACTGTTCTATA+TGG - chr5_3:64964057-64964076 Msa0825240:five_prime_UTR 20.0%
!! CATGTTTGATTCTTTAAGAA+CGG + chr5_3:64955814-64955833 None:intergenic 25.0%
!!! TCACAGTTACTGATTTTTTT+TGG - chr5_3:64955961-64955980 Msa0825240:three_prime_UTR 25.0%
!! TACTGTTTTCTTGATTTAAG+GGG - chr5_3:64956037-64956056 Msa0825240:exon 25.0%
!!! ATAAGTTTTGTGAGACTATT+CGG - chr5_3:64956095-64956114 Msa0825240:CDS 25.0%
! TGGAAACATGATTGAAAATA+AGG - chr5_3:64956410-64956429 Msa0825240:intron 25.0%
! GATGTTAAAAGCTTACAAAA+TGG - chr5_3:64956442-64956461 Msa0825240:intron 25.0%
!!! GAGTTTTTCGTTTTTATGTT+CGG - chr5_3:64956828-64956847 Msa0825240:CDS 25.0%
!! ATACTTTTCATGAAGTAAGA+AGG - chr5_3:64956893-64956912 Msa0825240:CDS 25.0%
!! AAAATCTTACTTCTTTTCTG+CGG + chr5_3:64956927-64956946 None:intergenic 25.0%
! GTAATTGTTAGTATTATGCT+GGG + chr5_3:64957065-64957084 None:intergenic 25.0%
! AGTAATTGTTAGTATTATGC+TGG + chr5_3:64957066-64957085 None:intergenic 25.0%
! TATTTAGATGAGAAATCAAC+TGG + chr5_3:64957190-64957209 None:intergenic 25.0%
!! AACATAAAACAGGTCTTTTA+CGG + chr5_3:64957375-64957394 None:intergenic 25.0%
!! AAAAGTATGAAAAATGTACC+AGG + chr5_3:64957625-64957644 None:intergenic 25.0%
! TTCGTTTATGAAGATTCTTA+AGG - chr5_3:64957685-64957704 Msa0825240:intron 25.0%
!!! ATTTTACAGACTGATTTTCT+TGG + chr5_3:64957714-64957733 None:intergenic 25.0%
!! ATCAGTCTGTAAAATACTTT+TGG - chr5_3:64957719-64957738 Msa0825240:intron 25.0%
! TAGCATCAAAAGATAAAAGT+GGG + chr5_3:64957932-64957951 None:intergenic 25.0%
! ATAGCATCAAAAGATAAAAG+TGG + chr5_3:64957933-64957952 None:intergenic 25.0%
!! TTATGATGATGATGATGAAT+AGG + chr5_3:64957989-64958008 None:intergenic 25.0%
! AATGAGCTAATAAAATAAGC+AGG + chr5_3:64958017-64958036 None:intergenic 25.0%
!! TTAGTGTTTTTCTGTAAATC+TGG + chr5_3:64958163-64958182 None:intergenic 25.0%
! TAATAGAAATTACAACCTTG+AGG + chr5_3:64958200-64958219 None:intergenic 25.0%
! TCTTATAATCAGAGATAGTA+TGG + chr5_3:64958242-64958261 None:intergenic 25.0%
! AACGAAAGAAAAACAAAGTA+AGG - chr5_3:64958344-64958363 Msa0825240:intron 25.0%
! GCAAACAAACAAATACAAAA+GGG + chr5_3:64958383-64958402 None:intergenic 25.0%
! TGCAAACAAACAAATACAAA+AGG + chr5_3:64958384-64958403 None:intergenic 25.0%
!! AGTAATTTCCTACTTGATTT+TGG - chr5_3:64958572-64958591 Msa0825240:CDS 25.0%
! TTGTTTCCTTTAACATGATT+TGG + chr5_3:64959049-64959068 None:intergenic 25.0%
!! ACAATTTTACCAGATGTATA+TGG - chr5_3:64959367-64959386 Msa0825240:intron 25.0%
!!! AAGATTTTTTTCCCATACTT+TGG + chr5_3:64959471-64959490 None:intergenic 25.0%
! CCTTAAAATATCTTCAGAAA+AGG + chr5_3:64959499-64959518 None:intergenic 25.0%
!!! CCTTTTCTGAAGATATTTTA+AGG - chr5_3:64959496-64959515 Msa0825240:intron 25.0%
! TTTCAGCACAAAAAAAATCT+GGG + chr5_3:64959572-64959591 None:intergenic 25.0%
! ATTTCAGCACAAAAAAAATC+TGG + chr5_3:64959573-64959592 None:intergenic 25.0%
!! TTTTTGCTTACAATTTGAGA+CGG + chr5_3:64960128-64960147 None:intergenic 25.0%
!!! TTTCTTTGGAATAAGTTTCA+TGG - chr5_3:64960218-64960237 Msa0825240:intron 25.0%
!!! TTCTTTGGAATAAGTTTCAT+GGG - chr5_3:64960219-64960238 Msa0825240:intron 25.0%
!! GATGTAAGAACAATTTTCAT+TGG - chr5_3:64960244-64960263 Msa0825240:intron 25.0%
!!! TTTTCATTGGCTATTGATTA+TGG - chr5_3:64960257-64960276 Msa0825240:intron 25.0%
!! GTTTAAGCAAAAGTTTTTCT+TGG - chr5_3:64960331-64960350 Msa0825240:intron 25.0%
! TCATAGACAAAGAAATGATT+TGG - chr5_3:64960691-64960710 Msa0825240:CDS 25.0%
! TAACTCAAAAAGATGAATTG+GGG + chr5_3:64960750-64960769 None:intergenic 25.0%
! GTAACTCAAAAAGATGAATT+GGG + chr5_3:64960751-64960770 None:intergenic 25.0%
! GGTTCATTATAGTTATTCTT+GGG + chr5_3:64960907-64960926 None:intergenic 25.0%
! AGGTTCATTATAGTTATTCT+TGG + chr5_3:64960908-64960927 None:intergenic 25.0%
! ACTATAATGAACCTAAAAGT+TGG - chr5_3:64960914-64960933 Msa0825240:CDS 25.0%
!!! TCTTCCTTTTTTATAATAGG+AGG + chr5_3:64960998-64961017 None:intergenic 25.0%
! TCAAAACATAGATTACAACA+TGG + chr5_3:64961032-64961051 None:intergenic 25.0%
!!! TGTTGTAATCTATGTTTTGA+TGG - chr5_3:64961032-64961051 Msa0825240:intron 25.0%
! ACTTCAAACAACATAAACTA+AGG - chr5_3:64961866-64961885 Msa0825240:intron 25.0%
! CTTCAAACAACATAAACTAA+GGG - chr5_3:64961867-64961886 Msa0825240:intron 25.0%
! ATTTAGACAAAGTTAGTTAC+TGG - chr5_3:64962166-64962185 Msa0825240:CDS 25.0%
! GGTCAATGAAAAAGAATTTA+AGG - chr5_3:64962384-64962403 Msa0825240:intron 25.0%
! TTGAAGAATAAACTTGAGAT+TGG - chr5_3:64962493-64962512 Msa0825240:intron 25.0%
!! TTATTAATCCATTTGTTGGT+TGG - chr5_3:64962630-64962649 Msa0825240:intron 25.0%
! TAAAGAATGACAGAGATATT+AGG + chr5_3:64962690-64962709 None:intergenic 25.0%
!!! TGGAATTCTAATTTTTAGGA+TGG - chr5_3:64963650-64963669 Msa0825240:intron 25.0%
!!! GGAATTCTAATTTTTAGGAT+GGG - chr5_3:64963651-64963670 Msa0825240:intron 25.0%
! TGAAGTGTAAATAACAAATG+CGG - chr5_3:64963753-64963772 Msa0825240:intron 25.0%
! AATATCATCAGGAATTACTA+AGG + chr5_3:64963943-64963962 None:intergenic 25.0%
CGTTCTTAAAGAATCAAACA+TGG - chr5_3:64955812-64955831 Msa0825240:three_prime_UTR 30.0%
!! AGCTTTTGAGTAGTTTCATT+GGG + chr5_3:64955840-64955859 None:intergenic 30.0%
!! AAGCTTTTGAGTAGTTTCAT+TGG + chr5_3:64955841-64955860 None:intergenic 30.0%
! TTCTTGATTTAAGGGGTTTT+TGG - chr5_3:64956044-64956063 Msa0825240:exon 30.0%
!! CATTGTTCATAAGCTGTTTT+TGG - chr5_3:64956142-64956161 Msa0825240:CDS 30.0%
AAGCTTACAAAATGGGATTT+AGG - chr5_3:64956450-64956469 Msa0825240:intron 30.0%
CGAAATAGCTAATACAAACA+GGG + chr5_3:64956476-64956495 None:intergenic 30.0%
TCGAAATAGCTAATACAAAC+AGG + chr5_3:64956477-64956496 None:intergenic 30.0%
!! GTTTTTGGATAAGCTATAAG+CGG - chr5_3:64956513-64956532 Msa0825240:intron 30.0%
AAGCTTATGACATTGTTCAA+AGG + chr5_3:64956586-64956605 None:intergenic 30.0%
GCTTATTTGAGCTTATCTAT+TGG + chr5_3:64956648-64956667 None:intergenic 30.0%
!! TTTATGTTCGGTGTATTAAC+TGG - chr5_3:64956840-64956859 Msa0825240:CDS 30.0%
! TATTTTCCCATTACTAGTAG+AGG - chr5_3:64956990-64957009 Msa0825240:intron 30.0%
TTAACTCCTCTACTAGTAAT+GGG + chr5_3:64956999-64957018 None:intergenic 30.0%
ATTGCATTTGAAAGTTAGGT+TGG - chr5_3:64957159-64957178 Msa0825240:intron 30.0%
CATGTATATTCAGACAGTTA+GGG + chr5_3:64957285-64957304 None:intergenic 30.0%
TGAATATACATGGTTGCAAT+AGG - chr5_3:64957293-64957312 Msa0825240:intron 30.0%
ATTACAGAGTGCATACTAAA+CGG + chr5_3:64957332-64957351 None:intergenic 30.0%
!!! TTTTTAACTTGGCCATTGTA+GGG - chr5_3:64957505-64957524 Msa0825240:intron 30.0%
AGCATCAAAAGATAAAAGTG+GGG + chr5_3:64957931-64957950 None:intergenic 30.0%
TAGGACAGATCTCTATAATA+TGG + chr5_3:64957970-64957989 None:intergenic 30.0%
CAAGAGATGTTTGAAAGAAA+AGG + chr5_3:64958047-64958066 None:intergenic 30.0%
TAACCAAATCTCATTCATTC+TGG - chr5_3:64958414-64958433 Msa0825240:CDS 30.0%
TTACCAGAATGAATGAGATT+TGG + chr5_3:64958420-64958439 None:intergenic 30.0%
CAGTAAATCCAAAATCAAGT+AGG + chr5_3:64958583-64958602 None:intergenic 30.0%
TCAACATCAAATTTCTGTAC+CGG - chr5_3:64958916-64958935 Msa0825240:intron 30.0%
! TTTGACTTTGGTATTGCATT+CGG + chr5_3:64959142-64959161 None:intergenic 30.0%
! CTTTCAACTTCATTTGACTT+TGG + chr5_3:64959154-64959173 None:intergenic 30.0%
CAAATGAAGTTGAAAGTAAC+CGG - chr5_3:64959158-64959177 Msa0825240:intron 30.0%
ATAAAAACTTTACCTTGAGG+TGG + chr5_3:64959244-64959263 None:intergenic 30.0%
GGAATAAAAACTTTACCTTG+AGG + chr5_3:64959247-64959266 None:intergenic 30.0%
AAACAATGACCATATACATC+TGG + chr5_3:64959379-64959398 None:intergenic 30.0%
TGAAATAATCCCACATTTGA+TGG - chr5_3:64959587-64959606 Msa0825240:intron 30.0%
AGTATGATTCCATCAAATGT+GGG + chr5_3:64959599-64959618 None:intergenic 30.0%
ATGCTGAAACTGTTAATTCA+AGG - chr5_3:64959963-64959982 Msa0825240:CDS 30.0%
! CAAAGAAAAGCACATACATT+AGG + chr5_3:64960006-64960025 None:intergenic 30.0%
TCACTCATACACCATTTAAA+AGG + chr5_3:64960065-64960084 None:intergenic 30.0%
! GCTATTGATTATGGAGAAAA+TGG - chr5_3:64960266-64960285 Msa0825240:intron 30.0%
! GTCTGTTTTGCTTACATTTT+TGG - chr5_3:64960403-64960422 Msa0825240:intron 30.0%
!! TTTTTCCTTACATTTTGGGA+CGG - chr5_3:64960448-64960467 Msa0825240:intron 30.0%
TCAAACATTCCTTAATGAAG+AGG + chr5_3:64960489-64960508 None:intergenic 30.0%
ATTAAGGAATGTTTGAGAGT+AGG - chr5_3:64960493-64960512 Msa0825240:CDS 30.0%
TTAAGGAATGTTTGAGAGTA+GGG - chr5_3:64960494-64960513 Msa0825240:CDS 30.0%
!!! GTTTATGGCGAATGTTTTTT+TGG - chr5_3:64960654-64960673 Msa0825240:CDS 30.0%
AACTCAAAAAGATGAATTGG+GGG + chr5_3:64960749-64960768 None:intergenic 30.0%
GGTAACTCAAAAAGATGAAT+TGG + chr5_3:64960752-64960771 None:intergenic 30.0%
!!! TTTTTGAGTTACCCCAAATT+AGG - chr5_3:64960759-64960778 Msa0825240:CDS 30.0%
!!! TTTTGAGTTACCCCAAATTA+GGG - chr5_3:64960760-64960779 Msa0825240:CDS 30.0%
GAATTAAAACCCCTAATTTG+GGG + chr5_3:64960773-64960792 None:intergenic 30.0%
GGAATTAAAACCCCTAATTT+GGG + chr5_3:64960774-64960793 None:intergenic 30.0%
TGGAATTAAAACCCCTAATT+TGG + chr5_3:64960775-64960794 None:intergenic 30.0%
!!! AATTAGGGGTTTTAATTCCA+TGG - chr5_3:64960775-64960794 Msa0825240:CDS 30.0%
AATTTCATGTCTACCATGTT+AGG - chr5_3:64961280-64961299 Msa0825240:intron 30.0%
ATTTCATGTCTACCATGTTA+GGG - chr5_3:64961281-64961300 Msa0825240:intron 30.0%
TCTTAAGAAATACATGATGG+AGG + chr5_3:64961383-64961402 None:intergenic 30.0%
!! GATACTGACTTGTATTCATA+TGG - chr5_3:64961477-64961496 Msa0825240:intron 30.0%
TTGTATTCATATGGTTGGAA+AGG - chr5_3:64961486-64961505 Msa0825240:intron 30.0%
TTAGTGCAAATTAATGTGAG+AGG + chr5_3:64961523-64961542 None:intergenic 30.0%
! AGTTTTCAATCATAAAGTCC+GGG + chr5_3:64961631-64961650 None:intergenic 30.0%
! GAGTTTTCAATCATAAAGTC+CGG + chr5_3:64961632-64961651 None:intergenic 30.0%
TTAAGCATATATTAAGCCCT+TGG - chr5_3:64961728-64961747 Msa0825240:intron 30.0%
! TCAGTAGTTTATTTGTTGAC+AGG - chr5_3:64961778-64961797 Msa0825240:intron 30.0%
AATGTCTAAACTACACATCT+TGG - chr5_3:64961818-64961837 Msa0825240:intron 30.0%
! TATGTTGTTTGAAGTAAGCA+TGG + chr5_3:64961861-64961880 None:intergenic 30.0%
ATTAAACTTAGGGTGTGTTT+GGG + chr5_3:64962120-64962139 None:intergenic 30.0%
AATTAAACTTAGGGTGTGTT+TGG + chr5_3:64962121-64962140 None:intergenic 30.0%
TTAGTTACTGGTCAATGAAT+CGG - chr5_3:64962178-64962197 Msa0825240:intron 30.0%
GGTCAATGAAAAAGAATGTA+AGG - chr5_3:64962208-64962227 Msa0825240:intron 30.0%
! TATGTTGTTTGAAGTAAGCA+TGG + chr5_3:64961861-64961880 None:intergenic 30.0%
ATTTAGACAAAGTTAGCTAC+TGG - chr5_3:64962342-64962361 Msa0825240:intron 30.0%
ACTTGAGATTGGAAATCAAT+TGG - chr5_3:64962504-64962523 Msa0825240:intron 30.0%
TGGCTTAAAAATTGATGCAT+TGG + chr5_3:64962873-64962892 None:intergenic 30.0%
!! CATCAATTTTTAAGCCACAA+TGG - chr5_3:64962876-64962895 Msa0825240:intron 30.0%
! TAGAAGAATTTTACAGACTC+TGG - chr5_3:64963226-64963245 Msa0825240:intron 30.0%
! TAGAGAATTAAGTTGCAAAC+CGG + chr5_3:64963426-64963445 None:intergenic 30.0%
! TGTTATTTACACTTCAGATC+AGG + chr5_3:64963749-64963768 None:intergenic 30.0%
! AACAACTACATGTTTCTAAG+GGG + chr5_3:64963910-64963929 None:intergenic 30.0%
! CAACAACTACATGTTTCTAA+GGG + chr5_3:64963911-64963930 None:intergenic 30.0%
AACATGTAGTTGTTGCTATA+AGG - chr5_3:64963916-64963935 Msa0825240:CDS 30.0%
TGGCTTAGTATAATATCATC+AGG + chr5_3:64963954-64963973 None:intergenic 30.0%
GCTATCAAAATGTAGTATAC+AGG + chr5_3:64964029-64964048 None:intergenic 30.0%
! ATGGTTTTCCGTACATTGTT+GGG + chr5_3:64955738-64955757 None:intergenic 35.0%
ACTCAAAAGCTTCTCTATCT+AGG - chr5_3:64955849-64955868 Msa0825240:three_prime_UTR 35.0%
!! AATAAGCTGTTTCTCCAAAC+AGG - chr5_3:64956305-64956324 Msa0825240:CDS 35.0%
!! ATAAGCTGTTTCTCCAAACA+GGG - chr5_3:64956306-64956325 Msa0825240:CDS 35.0%
CTTAACTCCTCTACTAGTAA+TGG + chr5_3:64957000-64957019 None:intergenic 35.0%
CATTACTAGTAGAGGAGTTA+AGG - chr5_3:64956998-64957017 Msa0825240:intron 35.0%
TAAGGAGCAGAGTAATATTG+AGG - chr5_3:64957016-64957035 Msa0825240:intron 35.0%
CCATGTATATTCAGACAGTT+AGG + chr5_3:64957286-64957305 None:intergenic 35.0%
CCTAACTGTCTGAATATACA+TGG - chr5_3:64957283-64957302 Msa0825240:intron 35.0%
! ACCTGTTTTATGTTTTGCAG+TGG - chr5_3:64957381-64957400 Msa0825240:intron 35.0%
! CCTGTTTTATGTTTTGCAGT+GGG - chr5_3:64957382-64957401 Msa0825240:intron 35.0%
!!! GTTTTTAACTTGGCCATTGT+AGG - chr5_3:64957504-64957523 Msa0825240:intron 35.0%
AAATGTACCAGGAAAGTTTG+AGG + chr5_3:64957614-64957633 None:intergenic 35.0%
!! CTTTTTAGAGGCTAGATAGT+AGG - chr5_3:64957640-64957659 Msa0825240:intron 35.0%
AATCTTCATAAACGAAGCAG+AGG + chr5_3:64957681-64957700 None:intergenic 35.0%
TTCAAACATCTCTTGCTAGA+TGG - chr5_3:64958052-64958071 Msa0825240:intron 35.0%
AAATTACAACCTTGAGGCTT+GGG + chr5_3:64958194-64958213 None:intergenic 35.0%
CTTGCTTCTTATCGTTAAAC+AGG + chr5_3:64958300-64958319 None:intergenic 35.0%
CTGTTTAACGATAAGAAGCA+AGG - chr5_3:64958298-64958317 Msa0825240:intron 35.0%
GATGCAGTTTATTTGACAAG+TGG - chr5_3:64958602-64958621 Msa0825240:CDS 35.0%
CAACACTACCTATAAGAGAT+TGG + chr5_3:64958742-64958761 None:intergenic 35.0%
TAGAAGCTGAACTACTTTGT+GGG + chr5_3:64958772-64958791 None:intergenic 35.0%
TTAGAAGCTGAACTACTTTG+TGG + chr5_3:64958773-64958792 None:intergenic 35.0%
AGTTCTTGTAATTGAGGCAA+AGG + chr5_3:64958867-64958886 None:intergenic 35.0%
TTGGTCAGTTCTTGTAATTG+AGG + chr5_3:64958873-64958892 None:intergenic 35.0%
TCAATTACAAGAACTGACCA+AGG - chr5_3:64958872-64958891 Msa0825240:intron 35.0%
! AACTTGAGAGAGATTTTCCT+TGG + chr5_3:64958892-64958911 None:intergenic 35.0%
CAACATCAAATTTCTGTACC+GGG - chr5_3:64958917-64958936 Msa0825240:intron 35.0%
TTGACTTTGGTATTGCATTC+GGG + chr5_3:64959141-64959160 None:intergenic 35.0%
TAAACCAGAAATTGAGGAGA+TGG + chr5_3:64959315-64959334 None:intergenic 35.0%
!! ATCTCCTCAATTTCTGGTTT+AGG - chr5_3:64959314-64959333 Msa0825240:intron 35.0%
! TATATGGTCATTGTTTTCCC+TGG - chr5_3:64959383-64959402 Msa0825240:intron 35.0%
AATATTGTCCTCCAATACCA+GGG + chr5_3:64959403-64959422 None:intergenic 35.0%
TAATATTGTCCTCCAATACC+AGG + chr5_3:64959404-64959423 None:intergenic 35.0%
TTCAGTTCAATTACTCTCGA+GGG + chr5_3:64959428-64959447 None:intergenic 35.0%
ATAGGAGCAAAATCCAAACA+CGG + chr5_3:64959540-64959559 None:intergenic 35.0%
AAATCTGGGAGTTAACTGAT+AGG + chr5_3:64959558-64959577 None:intergenic 35.0%
CAGTATGATTCCATCAAATG+TGG + chr5_3:64959600-64959619 None:intergenic 35.0%
!! AACAGAATTTTAGGTGACTC+TGG + chr5_3:64959630-64959649 None:intergenic 35.0%
TTAAAAGGTGGTCTGACATT+TGG - chr5_3:64959848-64959867 Msa0825240:CDS 35.0%
! ACACTGCTAGATTTTTCACT+TGG + chr5_3:64959893-64959912 None:intergenic 35.0%
GAAAAATCTAGCAGTGTAAC+TGG - chr5_3:64959896-64959915 Msa0825240:CDS 35.0%
! TGTATGTGCTTTTCTTTGCA+TGG - chr5_3:64960008-64960027 Msa0825240:intron 35.0%
! ACCATTTAAAAGGTGTGAGA+GGG + chr5_3:64960055-64960074 None:intergenic 35.0%
AATGGTGTATGAGTGATGTA+TGG - chr5_3:64960069-64960088 Msa0825240:intron 35.0%
TGTATGAGTGATGTATGGTT+GGG - chr5_3:64960074-64960093 Msa0825240:intron 35.0%
! TTTGTTTGGGAGAGTTTTTG+AGG - chr5_3:64960616-64960635 Msa0825240:CDS 35.0%
! TTGTTTGGGAGAGTTTTTGA+GGG - chr5_3:64960617-64960636 Msa0825240:CDS 35.0%
! TTTGAGTTACCCCAAATTAG+GGG - chr5_3:64960761-64960780 Msa0825240:CDS 35.0%
!! GCATGAGTTTATTTTCTCCA+TGG + chr5_3:64960795-64960814 None:intergenic 35.0%
! TTGGGCATTGTTTGGAAATT+GGG + chr5_3:64960889-64960908 None:intergenic 35.0%
! AGTTATTCTTGGGCATTGTT+TGG + chr5_3:64960897-64960916 None:intergenic 35.0%
! TCTGAAGGCATATCTATAAC+TGG - chr5_3:64961160-64961179 Msa0825240:intron 35.0%
TTTGAACAGTCAGAATTGGA+TGG + chr5_3:64961240-64961259 None:intergenic 35.0%
! GTTCAAAGTGCTCAAAACTA+TGG - chr5_3:64961253-64961272 Msa0825240:intron 35.0%
ACTCAGCAAGTTCAATTTGA+GGG - chr5_3:64961304-64961323 Msa0825240:intron 35.0%
AGGAACTTACAACAAAGGAA+GGG + chr5_3:64961363-64961382 None:intergenic 35.0%
! CTGACTTGTATTCATATGGT+TGG - chr5_3:64961481-64961500 Msa0825240:intron 35.0%
ACTAAAAGCTATTTGCTCTG+AGG - chr5_3:64961599-64961618 Msa0825240:CDS 35.0%
GAACCTTCAAACAATACCAA+GGG + chr5_3:64961747-64961766 None:intergenic 35.0%
TGAACCTTCAAACAATACCA+AGG + chr5_3:64961748-64961767 None:intergenic 35.0%
! AGTTTATTTGTTGACAGGCT+TGG - chr5_3:64961783-64961802 Msa0825240:intron 35.0%
! ACATAAACTAAGGGTGTGTT+TGG - chr5_3:64961876-64961895 Msa0825240:intron 35.0%
! CATAAACTAAGGGTGTGTTT+GGG - chr5_3:64961877-64961896 Msa0825240:intron 35.0%
TTAGCTACTGGTCAATGAAA+AGG - chr5_3:64962354-64962373 Msa0825240:intron 35.0%
TAGCTACTGGTCAATGAAAA+GGG - chr5_3:64962355-64962374 Msa0825240:intron 35.0%
GTGTATAACCAACCAACAAA+TGG + chr5_3:64962641-64962660 None:intergenic 35.0%
TGGTGGCCTAAAATAAGAAA+CGG + chr5_3:64962796-64962815 None:intergenic 35.0%
AAAATTGATGCATTGGAGAC+AGG + chr5_3:64962866-64962885 None:intergenic 35.0%
ACAGGAAATATGGCTCATAT+TGG - chr5_3:64962999-64963018 Msa0825240:intron 35.0%
GAAAACCAGATCTATACAAC+TGG - chr5_3:64963131-64963150 Msa0825240:intron 35.0%
TTTGAAGAAATAGGCACAGA+TGG + chr5_3:64963199-64963218 None:intergenic 35.0%
!!! TTTTTTTTCCTGCAGAGTGA+AGG - chr5_3:64963362-64963381 Msa0825240:intron 35.0%
GAATTCCAATTGATCTGAGA+AGG + chr5_3:64963638-64963657 None:intergenic 35.0%
! TAGGATGGGAAACATTTTCT+TGG - chr5_3:64963665-64963684 Msa0825240:intron 35.0%
AATCCATGAAGAATGAACAC+TGG - chr5_3:64963723-64963742 Msa0825240:intron 35.0%
!!! TTAGTAACTGTTTTTGGTGC+TGG - chr5_3:64963796-64963815 Msa0825240:intron 35.0%
! ACAACTACATGTTTCTAAGG+GGG + chr5_3:64963909-64963928 None:intergenic 35.0%
! GCAACAACTACATGTTTCTA+AGG + chr5_3:64963912-64963931 None:intergenic 35.0%
ATACAGGTGAGAATTGAGAA+CGG + chr5_3:64964013-64964032 None:intergenic 35.0%
! CTCTCTCTCTAAAAACACAG+AGG - chr5_3:64955633-64955652 Msa0825240:three_prime_UTR 40.0%
! TCTCTCTCTGAAAGAATGAG+CGG - chr5_3:64955672-64955691 Msa0825240:three_prime_UTR 40.0%
! TGGTTTTCCGTACATTGTTG+GGG + chr5_3:64955737-64955756 None:intergenic 40.0%
! GATGGTTTTCCGTACATTGT+TGG + chr5_3:64955739-64955758 None:intergenic 40.0%
!! AGTTTTGTGAGACTATTCGG+TGG - chr5_3:64956098-64956117 Msa0825240:CDS 40.0%
GAACAACTAAACCCTTCGAA+GGG + chr5_3:64956693-64956712 None:intergenic 40.0%
AGAACAACTAAACCCTTCGA+AGG + chr5_3:64956694-64956713 None:intergenic 40.0%
CAGAGTAATATTGAGGTCGA+GGG - chr5_3:64957023-64957042 Msa0825240:intron 40.0%
TTAGTATTATGCTGGGAGTG+GGG + chr5_3:64957058-64957077 None:intergenic 40.0%
GTTAGTATTATGCTGGGAGT+GGG + chr5_3:64957059-64957078 None:intergenic 40.0%
TGTTAGTATTATGCTGGGAG+TGG + chr5_3:64957060-64957079 None:intergenic 40.0%
AGCTCATAACACAACAAGAG+TGG + chr5_3:64957225-64957244 None:intergenic 40.0%
TCAGACAGTTAGGGAAAATG+AGG + chr5_3:64957276-64957295 None:intergenic 40.0%
CCCACTGCAAAACATAAAAC+AGG + chr5_3:64957385-64957404 None:intergenic 40.0%
GAGTCTAGATCAAAACAACG+TGG - chr5_3:64957550-64957569 Msa0825240:intron 40.0%
TAGATCAAAACAACGTGGAC+AGG - chr5_3:64957555-64957574 Msa0825240:intron 40.0%
AGATCAAAACAACGTGGACA+GGG - chr5_3:64957556-64957575 Msa0825240:intron 40.0%
GTTTGTATGACGTCTACACT+AGG - chr5_3:64957772-64957791 Msa0825240:intron 40.0%
AAACATCTCTTGCTAGATGG+TGG - chr5_3:64958055-64958074 Msa0825240:intron 40.0%
! CATTTTCCCTTCGAATAGGA+AGG + chr5_3:64958096-64958115 None:intergenic 40.0%
CTTCCTATTCGAAGGGAAAA+TGG - chr5_3:64958094-64958113 Msa0825240:intron 40.0%
! ACTCCATTTTCCCTTCGAAT+AGG + chr5_3:64958100-64958119 None:intergenic 40.0%
AATTACAACCTTGAGGCTTG+GGG + chr5_3:64958193-64958212 None:intergenic 40.0%
GAAATTACAACCTTGAGGCT+TGG + chr5_3:64958195-64958214 None:intergenic 40.0%
TCACGATTCTTCAATTGCAG+AGG - chr5_3:64958650-64958669 Msa0825240:intron 40.0%
!! TGGATTGATTTGCAGCACTA+CGG + chr5_3:64958691-64958710 None:intergenic 40.0%
AGTGCTGCAAATCAATCCAA+TGG - chr5_3:64958692-64958711 Msa0825240:intron 40.0%
GTGCTGCAAATCAATCCAAT+GGG - chr5_3:64958693-64958712 Msa0825240:intron 40.0%
AATCAATCCAATGGGAAGTC+TGG - chr5_3:64958701-64958720 Msa0825240:intron 40.0%
TCTTCTGGCCAATCTCTTAT+AGG - chr5_3:64958731-64958750 Msa0825240:intron 40.0%
AAAGGTTTGAGTAGGAGAAG+TGG + chr5_3:64958849-64958868 None:intergenic 40.0%
ATTGAGGCAAAGGTTTGAGT+AGG + chr5_3:64958857-64958876 None:intergenic 40.0%
GGAAACAAACTTGAAGAAGC+TGG - chr5_3:64959061-64959080 Msa0825240:intron 40.0%
AAACTTTACCTTGAGGTGGT+TGG + chr5_3:64959240-64959259 None:intergenic 40.0%
GTTTCCATCTCCTCAATTTC+TGG - chr5_3:64959308-64959327 Msa0825240:intron 40.0%
CCTACCTAAACCAGAAATTG+AGG + chr5_3:64959321-64959340 None:intergenic 40.0%
!! CCTCAATTTCTGGTTTAGGT+AGG - chr5_3:64959318-64959337 Msa0825240:intron 40.0%
! GTCATTGTTTTCCCTGGTAT+TGG - chr5_3:64959389-64959408 Msa0825240:intron 40.0%
!! ATTGTTTTCCCTGGTATTGG+AGG - chr5_3:64959392-64959411 Msa0825240:intron 40.0%
CTTCAGTTCAATTACTCTCG+AGG + chr5_3:64959429-64959448 None:intergenic 40.0%
AAATCCAAACACGGACAATC+AGG + chr5_3:64959531-64959550 None:intergenic 40.0%
TAAAACAGCCAATGTCACAG+AGG - chr5_3:64959742-64959761 Msa0825240:CDS 40.0%
ACTGAAGAAGATTCAGGAGT+GGG + chr5_3:64959941-64959960 None:intergenic 40.0%
GCATTCACTGAAGAAGATTC+AGG + chr5_3:64959947-64959966 None:intergenic 40.0%
! TCCCTCTCACACCTTTTAAA+TGG - chr5_3:64960051-64960070 Msa0825240:intron 40.0%
! CACCATTTAAAAGGTGTGAG+AGG + chr5_3:64960056-64960075 None:intergenic 40.0%
GTGTATGAGTGATGTATGGT+TGG - chr5_3:64960073-64960092 Msa0825240:intron 40.0%
! TGCTTACAATTTGAGACGGA+GGG + chr5_3:64960124-64960143 None:intergenic 40.0%
! TTGCTTACAATTTGAGACGG+AGG + chr5_3:64960125-64960144 None:intergenic 40.0%
ATGAGAAGGGGAATGAAAGT+AGG - chr5_3:64960542-64960561 Msa0825240:CDS 40.0%
TGAGAAGGGGAATGAAAGTA+GGG - chr5_3:64960543-64960562 Msa0825240:CDS 40.0%
AGGGTTTGATGGGAATGATA+AGG - chr5_3:64960577-64960596 Msa0825240:CDS 40.0%
GGGTTTGATGGGAATGATAA+GGG - chr5_3:64960578-64960597 Msa0825240:CDS 40.0%
GGTTTGATGGGAATGATAAG+GGG - chr5_3:64960579-64960598 Msa0825240:CDS 40.0%
!! TGTTTGGGAGAGTTTTTGAG+GGG - chr5_3:64960618-64960637 Msa0825240:CDS 40.0%
TTTGGAAATTGGGAGGGTAA+GGG + chr5_3:64960879-64960898 None:intergenic 40.0%
GCATTGTTTGGAAATTGGGA+GGG + chr5_3:64960885-64960904 None:intergenic 40.0%
! CTTGGGCATTGTTTGGAAAT+TGG + chr5_3:64960890-64960909 None:intergenic 40.0%
!! CCTTTCTAGCACCAACTTTT+AGG + chr5_3:64960928-64960947 None:intergenic 40.0%
!! CCTAAAAGTTGGTGCTAGAA+AGG - chr5_3:64960925-64960944 Msa0825240:CDS 40.0%
!! TTGGTGCTAGAAAGGTGTAT+AGG - chr5_3:64960933-64960952 Msa0825240:CDS 40.0%
ATCAAGATGATCTCCGTGTT+CGG + chr5_3:64961098-64961117 None:intergenic 40.0%
GTTAACAATACCTCCTGCTT+TGG + chr5_3:64961208-64961227 None:intergenic 40.0%
GCACTTTGAACAGTCAGAAT+TGG + chr5_3:64961244-64961263 None:intergenic 40.0%
GACTCAGCAAGTTCAATTTG+AGG - chr5_3:64961303-64961322 Msa0825240:intron 40.0%
GAGGAACTTACAACAAAGGA+AGG + chr5_3:64961364-64961383 None:intergenic 40.0%
GATGGAGGAACTTACAACAA+AGG + chr5_3:64961368-64961387 None:intergenic 40.0%
!!! AGAAAGAGCGTCATTTTAGC+TGG - chr5_3:64961677-64961696 Msa0825240:intron 40.0%
AAGCCCTTGGTATTGTTTGA+AGG - chr5_3:64961741-64961760 Msa0825240:intron 40.0%
GGTCAATGAATCGGAATAAC+TGG - chr5_3:64962187-64962206 Msa0825240:intron 40.0%
AGCATGGAGTTGACTAAACA+TGG + chr5_3:64962269-64962288 None:intergenic 40.0%
GGTCAATGAAAAGGGATAAC+TGG - chr5_3:64962363-64962382 Msa0825240:intron 40.0%
!! CTAAAATAAGAAACGGGCTG+TGG + chr5_3:64962789-64962808 None:intergenic 40.0%
!!! CACAGCCCGTTTCTTATTTT+AGG - chr5_3:64962787-64962806 Msa0825240:CDS 40.0%
GGTGGCCTAAAATAAGAAAC+GGG + chr5_3:64962795-64962814 None:intergenic 40.0%
CATATGGGAAGAAGTTAGCT+GGG + chr5_3:64962821-64962840 None:intergenic 40.0%
AGGTAAATTGGGGGGTAATA+GGG + chr5_3:64962846-64962865 None:intergenic 40.0%
ATTGGAGACAGGTAAATTGG+GGG + chr5_3:64962855-64962874 None:intergenic 40.0%
CATTGGAGACAGGTAAATTG+GGG + chr5_3:64962856-64962875 None:intergenic 40.0%
GCATTGGAGACAGGTAAATT+GGG + chr5_3:64962857-64962876 None:intergenic 40.0%
TGCATTGGAGACAGGTAAAT+TGG + chr5_3:64962858-64962877 None:intergenic 40.0%
AGATACATGTTACCAGCTGA+TGG + chr5_3:64962915-64962934 None:intergenic 40.0%
GGCTCATATTGGAATTCCTT+CGG - chr5_3:64963010-64963029 Msa0825240:intron 40.0%
GCTCATATTGGAATTCCTTC+GGG - chr5_3:64963011-64963030 Msa0825240:intron 40.0%
TCATATATCACTCCACCTGT+TGG - chr5_3:64963035-64963054 Msa0825240:intron 40.0%
CACTGCAGTATCTTCATTTC+CGG + chr5_3:64963099-64963118 None:intergenic 40.0%
GTTGTCCAGTTGTATAGATC+TGG + chr5_3:64963139-64963158 None:intergenic 40.0%
GATCTATACAACTGGACAAC+TGG - chr5_3:64963139-64963158 Msa0825240:intron 40.0%
TATACAACTGGACAACTGGT+TGG - chr5_3:64963143-64963162 Msa0825240:intron 40.0%
AAGAAATAGGCACAGATGGA+TGG + chr5_3:64963195-64963214 None:intergenic 40.0%
TATATAACCTTGCCCCTCAA+GGG - chr5_3:64963444-64963463 Msa0825240:intron 40.0%
TTCCAATTGATCTGAGAAGG+CGG + chr5_3:64963635-64963654 None:intergenic 40.0%
! AACTACATGTTTCTAAGGGG+GGG + chr5_3:64963907-64963926 None:intergenic 40.0%
! CAACTACATGTTTCTAAGGG+GGG + chr5_3:64963908-64963927 None:intergenic 40.0%
AGCCAAGAGTTCAATAGAGT+TGG - chr5_3:64963969-64963988 Msa0825240:CDS 40.0%
CACCAACTCTATTGAACTCT+TGG + chr5_3:64963974-64963993 None:intergenic 40.0%
TTCCGATCCCCAACAATGTA+CGG - chr5_3:64955727-64955746 Msa0825240:three_prime_UTR 45.0%
TTCCGTACATTGTTGGGGAT+CGG + chr5_3:64955732-64955751 None:intergenic 45.0%
AACGGAGAAGATTTCGTCGT+CGG + chr5_3:64955796-64955815 None:intergenic 45.0%
GCTTGAGTTAAGACCCTGTT+TGG + chr5_3:64956322-64956341 None:intergenic 45.0%
ACAGTCCAAAAAGCCACACA+CGG + chr5_3:64956344-64956363 None:intergenic 45.0%
TCAAATAAGCCCGTCCAAAC+AGG - chr5_3:64956658-64956677 Msa0825240:CDS 45.0%
!! AAACCCTTCGAAGGGTACTA+CGG + chr5_3:64956685-64956704 None:intergenic 45.0%
GCAGAGTAATATTGAGGTCG+AGG - chr5_3:64957022-64957041 Msa0825240:intron 45.0%
GTAATATTGAGGTCGAGGGT+TGG - chr5_3:64957027-64957046 Msa0825240:intron 45.0%
CAGAGTGCATACTAAACGGA+TGG + chr5_3:64957328-64957347 None:intergenic 45.0%
ATTGTAGGGATTGAGCAGCA+GGG - chr5_3:64957519-64957538 Msa0825240:intron 45.0%
GATCAAAACAACGTGGACAG+GGG - chr5_3:64957557-64957576 Msa0825240:intron 45.0%
GGCTATTCCTCAAACTTTCC+TGG - chr5_3:64957604-64957623 Msa0825240:intron 45.0%
TGTATGACGTCTACACTAGG+TGG - chr5_3:64957775-64957794 Msa0825240:intron 45.0%
GAGGAACCTTCCTATTCGAA+GGG - chr5_3:64958087-64958106 Msa0825240:intron 45.0%
GAGTTCTCTCTGCAATGTGA+TGG + chr5_3:64958123-64958142 None:intergenic 45.0%
CTGTAAATCTGGCTGAGTAG+AGG + chr5_3:64958152-64958171 None:intergenic 45.0%
!! GATTGATTTGCAGCACTACG+GGG + chr5_3:64958689-64958708 None:intergenic 45.0%
!! GGATTGATTTGCAGCACTAC+GGG + chr5_3:64958690-64958709 None:intergenic 45.0%
TCTGAAGAGGAACAAACACC+CGG + chr5_3:64958938-64958957 None:intergenic 45.0%
GTGCTGTCAGTAAGGAAGTA+GGG - chr5_3:64959002-64959021 Msa0825240:intron 45.0%
GCTGGGCCAAATCATGTTAA+AGG - chr5_3:64959040-64959059 Msa0825240:intron 45.0%
GCATCCGAGAATGATAAGTC+CGG - chr5_3:64959094-64959113 Msa0825240:intron 45.0%
CATCCGAGAATGATAAGTCC+GGG - chr5_3:64959095-64959114 Msa0825240:intron 45.0%
! GCTTGTTGAATTCATGGACC+CGG + chr5_3:64959116-64959135 None:intergenic 45.0%
! CGGGTTGCTTGTTGAATTCA+TGG + chr5_3:64959122-64959141 None:intergenic 45.0%
GAAGACGATGAGAGTTGCAA+GGG + chr5_3:64959193-64959212 None:intergenic 45.0%
TGAAGACGATGAGAGTTGCA+AGG + chr5_3:64959194-64959213 None:intergenic 45.0%
TGAACTGAAGTAAAGCCCAC+CGG - chr5_3:64959439-64959458 Msa0825240:intron 45.0%
AGTTGAGACCTCTGTGACAT+TGG + chr5_3:64959753-64959772 None:intergenic 45.0%
TCAGGCACTTGGAAATGGTT+TGG + chr5_3:64959824-64959843 None:intergenic 45.0%
AAACCATTTCCAAGTGCCTG+AGG - chr5_3:64959823-64959842 Msa0825240:CDS 45.0%
!!! CTTTTAAAGCCTCAGGCACT+TGG + chr5_3:64959835-64959854 None:intergenic 45.0%
!! CAAGTGCCTGAGGCTTTAAA+AGG - chr5_3:64959833-64959852 Msa0825240:CDS 45.0%
!!! AGACCACCTTTTAAAGCCTC+AGG + chr5_3:64959842-64959861 None:intergenic 45.0%
CACTGAAGAAGATTCAGGAG+TGG + chr5_3:64959942-64959961 None:intergenic 45.0%
!!! TTCCTTACATTTTGGGACGG+AGG - chr5_3:64960451-64960470 Msa0825240:intron 45.0%
TTCCTCCGTCCCAAAATGTA+AGG + chr5_3:64960456-64960475 None:intergenic 45.0%
AGGAATGTTTGAGAGTAGGG+AGG - chr5_3:64960497-64960516 Msa0825240:CDS 45.0%
AGGGTTTGATGGGAATGAGA+AGG - chr5_3:64960528-64960547 Msa0825240:CDS 45.0%
GGGTTTGATGGGAATGAGAA+GGG - chr5_3:64960529-64960548 Msa0825240:CDS 45.0%
GGTTTGATGGGAATGAGAAG+GGG - chr5_3:64960530-64960549 Msa0825240:CDS 45.0%
GAATTGGGGGAGACTTTAGA+GGG + chr5_3:64960736-64960755 None:intergenic 45.0%
TGAATTGGGGGAGACTTTAG+AGG + chr5_3:64960737-64960756 None:intergenic 45.0%
GAAAGAGGAGAGAATGGAAG+GGG + chr5_3:64960839-64960858 None:intergenic 45.0%
GGAAAGAGGAGAGAATGGAA+GGG + chr5_3:64960840-64960859 None:intergenic 45.0%
GTTTGGAAATTGGGAGGGTA+AGG + chr5_3:64960880-64960899 None:intergenic 45.0%
GGCATTGTTTGGAAATTGGG+AGG + chr5_3:64960886-64960905 None:intergenic 45.0%
TCAAGATGATCTCCGTGTTC+GGG + chr5_3:64961097-64961116 None:intergenic 45.0%
!! AAAGAGACACTGGCTTCTGA+AGG - chr5_3:64961145-64961164 Msa0825240:intron 45.0%
AAAGATTGAGCAGCCAAAGC+AGG - chr5_3:64961192-64961211 Msa0825240:intron 45.0%
!! GAGGTATTGTTAACTCCCGA+GGG - chr5_3:64961214-64961233 Msa0825240:intron 45.0%
!! AACTTGCTGAGTCCCTAACA+TGG + chr5_3:64961296-64961315 None:intergenic 45.0%
ATTTGAGGGTAGTGAGCTTC+AGG - chr5_3:64961318-64961337 Msa0825240:intron 45.0%
ACAACAAAGGAAGGGAAGTG+TGG + chr5_3:64961355-64961374 None:intergenic 45.0%
!! TTTGCTCTGAGGTGATTTCC+CGG - chr5_3:64961610-64961629 Msa0825240:CDS 45.0%
AGCATGGAGTCGACTAAACA+TGG + chr5_3:64961845-64961864 None:intergenic 45.0%
! TAAGGGTGTGTTTGGGAAGA+GGG - chr5_3:64961884-64961903 Msa0825240:intron 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG - chr5_3:64961890-64961909 Msa0825240:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG - chr5_3:64961894-64961913 Msa0825240:intron 45.0%
TTTGGGAAGAGGGTTTAGGA+GGG + chr5_3:64961894-64961913 None:intergenic 45.0%
TGTGTTTGGGAAGAGGGTTT+AGG + chr5_3:64961890-64961909 None:intergenic 45.0%
TTAGGGTGTGTTTGGGAAGA+GGG + chr5_3:64962113-64962132 None:intergenic 45.0%
ATTGCAGACTGCAAGTTCTC+AGG - chr5_3:64962713-64962732 Msa0825240:intron 45.0%
ACAGGTATAGAGCTCTGTAG+AGG + chr5_3:64962762-64962781 None:intergenic 45.0%
AAGAAGTTAGCTGGGTATGG+TGG + chr5_3:64962813-64962832 None:intergenic 45.0%
CCATATGGGAAGAAGTTAGC+TGG + chr5_3:64962822-64962841 None:intergenic 45.0%
CCAGCTAACTTCTTCCCATA+TGG - chr5_3:64962819-64962838 Msa0825240:intron 45.0%
GGTAAATTGGGGGGTAATAG+GGG + chr5_3:64962845-64962864 None:intergenic 45.0%
CAGGTAAATTGGGGGGTAAT+AGG + chr5_3:64962847-64962866 None:intergenic 45.0%
TTGGAGACAGGTAAATTGGG+GGG + chr5_3:64962854-64962873 None:intergenic 45.0%
TAACATGTATCTACCAGCCG+CGG - chr5_3:64962923-64962942 Msa0825240:intron 45.0%
TGGAGCGAACACAGGAAATA+TGG - chr5_3:64962989-64963008 Msa0825240:intron 45.0%
GGAGTGATATATGATCCCGA+AGG + chr5_3:64963029-64963048 None:intergenic 45.0%
ATAGGCACAGATGGATGGAA+AGG + chr5_3:64963190-64963209 None:intergenic 45.0%
GTTGCAAACCGGACATATCT+TGG + chr5_3:64963415-64963434 None:intergenic 45.0%
CTATATAACCTTGCCCCTCA+AGG - chr5_3:64963443-64963462 Msa0825240:intron 45.0%
TTTCCCGGTATCTATCAACC+AGG - chr5_3:64963509-64963528 Msa0825240:intron 45.0%
TTCCCGGTATCTATCAACCA+GGG - chr5_3:64963510-64963529 Msa0825240:intron 45.0%
AGCTTGAGACTGCTGCAAAA+GGG + chr5_3:64963558-64963577 None:intergenic 45.0%
TACCGCCTTCTCAGATCAAT+TGG - chr5_3:64963630-64963649 Msa0825240:intron 45.0%
AGGCCAGTGTTCATTCTTCA+TGG + chr5_3:64963729-64963748 None:intergenic 45.0%
!!! TTTGGTGCTGGCGATTTTGA+AGG - chr5_3:64963808-64963827 Msa0825240:intron 45.0%
!!! TTGGTGCTGGCGATTTTGAA+GGG - chr5_3:64963809-64963828 Msa0825240:intron 45.0%
!! TAAAAAAAAAAAGATTAAAT+AGG - chr5_3:64960370-64960389 Msa0825240:intron 5.0%
! CTCTCTGAAAGAATGAGCGG+CGG - chr5_3:64955675-64955694 Msa0825240:three_prime_UTR 50.0%
GATCTCTCTGATGTCGTGGA+TGG + chr5_3:64955757-64955776 None:intergenic 50.0%
CACGACATCAGAGAGATCAC+CGG - chr5_3:64955759-64955778 Msa0825240:three_prime_UTR 50.0%
!!! GTCGTCGGTGTGTTGTTTTC+CGG + chr5_3:64955781-64955800 None:intergenic 50.0%
GTCTTAACTCAAGCCGTGTG+TGG - chr5_3:64956328-64956347 Msa0825240:intron 50.0%
! TCAAGCCGTGTGTGGCTTTT+TGG - chr5_3:64956336-64956355 Msa0825240:intron 50.0%
TACTACGGACCTGTTTGGAC+GGG + chr5_3:64956670-64956689 None:intergenic 50.0%
GTACTACGGACCTGTTTGGA+CGG + chr5_3:64956671-64956690 None:intergenic 50.0%
!! AAGGGTACTACGGACCTGTT+TGG + chr5_3:64956675-64956694 None:intergenic 50.0%
CTGCTGCTCAATCCCTACAA+TGG + chr5_3:64957520-64957539 None:intergenic 50.0%
CATTGTAGGGATTGAGCAGC+AGG - chr5_3:64957518-64957537 Msa0825240:intron 50.0%
ATTGAGCAGCAGGGTTTCTG+AGG - chr5_3:64957528-64957547 Msa0825240:intron 50.0%
AAAACAACGTGGACAGGGGA+GGG - chr5_3:64957561-64957580 Msa0825240:intron 50.0%
! GAGGGGAGCAAGAGGTTTTT+CGG - chr5_3:64957579-64957598 Msa0825240:intron 50.0%
! AGGGGAGCAAGAGGTTTTTC+GGG - chr5_3:64957580-64957599 Msa0825240:intron 50.0%
! CATCTCTTGCTAGATGGTGG+TGG - chr5_3:64958058-64958077 Msa0825240:intron 50.0%
GGAGGAACCTTCCTATTCGA+AGG - chr5_3:64958086-64958105 Msa0825240:intron 50.0%
TCCAATGGGAAGTCTGGTCA+CGG - chr5_3:64958707-64958726 Msa0825240:intron 50.0%
AAGTCTGGTCACGGTTCTTC+TGG - chr5_3:64958716-64958735 Msa0825240:intron 50.0%
GCTGCAACAACAACAGCTTG+AGG + chr5_3:64958824-64958843 None:intergenic 50.0%
TTCCTCTTCAGATCCTGTGC+TGG - chr5_3:64958946-64958965 Msa0825240:intron 50.0%
CCAGGAATCTGGGAGATAGA+TGG + chr5_3:64958974-64958993 None:intergenic 50.0%
CCATCTATCTCCCAGATTCC+TGG - chr5_3:64958971-64958990 Msa0825240:intron 50.0%
ATCTCCCAGATTCCTGGTGT+TGG - chr5_3:64958977-64958996 Msa0825240:intron 50.0%
! GGTGCTGTCAGTAAGGAAGT+AGG - chr5_3:64959001-64959020 Msa0825240:intron 50.0%
GTAAGGAAGTAGGGAGTGAC+CGG - chr5_3:64959011-64959030 Msa0825240:intron 50.0%
GATTTGGCCCAGCAGATATC+CGG + chr5_3:64959033-64959052 None:intergenic 50.0%
GGACCCGGACTTATCATTCT+CGG + chr5_3:64959101-64959120 None:intergenic 50.0%
GTTGCAAGGGCTCAGATAAC+CGG + chr5_3:64959180-64959199 None:intergenic 50.0%
GAACTGAAGTAAAGCCCACC+GGG - chr5_3:64959440-64959459 Msa0825240:intron 50.0%
ATACTTTGGCTAGACCCGGT+GGG + chr5_3:64959457-64959476 None:intergenic 50.0%
ACCGGGTCTAGCCAAAGTAT+GGG - chr5_3:64959457-64959476 Msa0825240:intron 50.0%
TCCCATACTTTGGCTAGACC+CGG + chr5_3:64959461-64959480 None:intergenic 50.0%
TCAGCCTGATTGTCCGTGTT+TGG - chr5_3:64959524-64959543 Msa0825240:intron 50.0%
! ACATCTGCAAACGCATCGAC+AGG + chr5_3:64959719-64959738 None:intergenic 50.0%
CTCAACTCAGTTGACTGCAC+AGG + chr5_3:64959785-64959804 None:intergenic 50.0%
CTGTGCAGTCAACTGAGTTG+AGG - chr5_3:64959783-64959802 Msa0825240:CDS 50.0%
AAGCCTCAGGCACTTGGAAA+TGG + chr5_3:64959829-64959848 None:intergenic 50.0%
!! GTGCCTGAGGCTTTAAAAGG+TGG - chr5_3:64959836-64959855 Msa0825240:CDS 50.0%
TGTTTGAGAGTAGGGAGGAG+AGG - chr5_3:64960502-64960521 Msa0825240:CDS 50.0%
AGGAGAGGAGAAGGGTTTGA+TGG - chr5_3:64960517-64960536 Msa0825240:CDS 50.0%
GGAGAGGAGAAGGGTTTGAT+GGG - chr5_3:64960518-64960537 Msa0825240:CDS 50.0%
GAAGGGGAATGAAAGTAGGG+AGG - chr5_3:64960546-64960565 Msa0825240:CDS 50.0%
GGAATGAAAGTAGGGAGGAG+AGG - chr5_3:64960551-64960570 Msa0825240:CDS 50.0%
AAAGTAGGGAGGAGAGGAGA+AGG - chr5_3:64960557-64960576 Msa0825240:CDS 50.0%
AAGTAGGGAGGAGAGGAGAA+GGG - chr5_3:64960558-64960577 Msa0825240:CDS 50.0%
AGGAGAGGAGAAGGGTTTGA+TGG - chr5_3:64960517-64960536 Msa0825240:CDS 50.0%
GGAGAGGAGAAGGGTTTGAT+GGG - chr5_3:64960518-64960537 Msa0825240:CDS 50.0%
!! AGAGTTTTTGAGGGGTGTGG+AGG - chr5_3:64960626-64960645 Msa0825240:CDS 50.0%
!! GAGTTTTTGAGGGGTGTGGA+GGG - chr5_3:64960627-64960646 Msa0825240:CDS 50.0%
!! AGTTTTTGAGGGGTGTGGAG+GGG - chr5_3:64960628-64960647 Msa0825240:CDS 50.0%
AGGAGAGAATGGAAGGGGAA+GGG + chr5_3:64960834-64960853 None:intergenic 50.0%
GGGAAAGAGGAGAGAATGGA+AGG + chr5_3:64960841-64960860 None:intergenic 50.0%
TGAGGGGAAAGAGGAGAGAA+TGG + chr5_3:64960845-64960864 None:intergenic 50.0%
TAAGGGAAGGCAGGGTTTGA+GGG + chr5_3:64960862-64960881 None:intergenic 50.0%
GAAATTGGGAGGGTAAGGGA+AGG + chr5_3:64960875-64960894 None:intergenic 50.0%
!! GGAGGTATTGTTAACTCCCG+AGG - chr5_3:64961213-64961232 Msa0825240:intron 50.0%
AGTCAGAATTGGATGGCCCT+CGG + chr5_3:64961233-64961252 None:intergenic 50.0%
! CTAAGGGTGTGTTTGGGAAG+AGG - chr5_3:64961883-64961902 Msa0825240:intron 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG - chr5_3:64961893-64961912 Msa0825240:intron 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG - chr5_3:64961895-64961914 Msa0825240:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG - chr5_3:64961900-64961919 Msa0825240:intron 50.0%
AAGAGGGTTTAGGAGGGGAA+GGG + chr5_3:64961900-64961919 None:intergenic 50.0%
TTGGGAAGAGGGTTTAGGAG+GGG + chr5_3:64961895-64961914 None:intergenic 50.0%
GTTTGGGAAGAGGGTTTAGG+AGG + chr5_3:64961893-64961912 None:intergenic 50.0%
CTTAGGGTGTGTTTGGGAAG+AGG + chr5_3:64962114-64962133 None:intergenic 50.0%
AGCTCTGTAGAGGTGGAGTT+GGG + chr5_3:64962752-64962771 None:intergenic 50.0%
GGTATAGAGCTCTGTAGAGG+TGG + chr5_3:64962759-64962778 None:intergenic 50.0%
GGGAAGAAGTTAGCTGGGTA+TGG + chr5_3:64962816-64962835 None:intergenic 50.0%
GCTGTTGAGGGAAACCATTG+TGG + chr5_3:64962893-64962912 None:intergenic 50.0%
TACCAGCTGATGGCTGTTGA+GGG + chr5_3:64962905-64962924 None:intergenic 50.0%
TTACCAGCTGATGGCTGTTG+AGG + chr5_3:64962906-64962925 None:intergenic 50.0%
TTCGCTCCAGCCTTGAATTG+CGG + chr5_3:64962978-64962997 None:intergenic 50.0%
! CTAGGAGCATATCCAACAGG+TGG + chr5_3:64963050-64963069 None:intergenic 50.0%
! GGACTAGGAGCATATCCAAC+AGG + chr5_3:64963053-64963072 None:intergenic 50.0%
GAGCTTCCAGTATTCACGGT+CGG + chr5_3:64963074-64963093 None:intergenic 50.0%
GGCAGAGCTTCCAGTATTCA+CGG + chr5_3:64963078-64963097 None:intergenic 50.0%
GTGAATACTGGAAGCTCTGC+CGG - chr5_3:64963077-64963096 Msa0825240:intron 50.0%
AAACCGGACATATCTTGGCC+TGG + chr5_3:64963410-64963429 None:intergenic 50.0%
AGGTGAGATGTTGCCCTTGA+GGG + chr5_3:64963460-64963479 None:intergenic 50.0%
AAGGTGAGATGTTGCCCTTG+AGG + chr5_3:64963461-64963480 None:intergenic 50.0%
!! TGCCCTGGTTGATAGATACC+GGG + chr5_3:64963515-64963534 None:intergenic 50.0%
!! CTGCCCTGGTTGATAGATAC+CGG + chr5_3:64963516-64963535 None:intergenic 50.0%
GACTGCTGCAAAAGGGTAGA+AGG + chr5_3:64963551-64963570 None:intergenic 50.0%
CAGCTTGAGACTGCTGCAAA+AGG + chr5_3:64963559-64963578 None:intergenic 50.0%
AGCAGTCTCAAGCTGTTGCT+GGG - chr5_3:64963564-64963583 Msa0825240:intron 50.0%
TGCTGATAAGATCCTGGAGG+CGG + chr5_3:64963608-64963627 None:intergenic 50.0%
AGCTGCTGATAAGATCCTGG+AGG + chr5_3:64963611-64963630 None:intergenic 50.0%
GGTAGCTGCTGATAAGATCC+TGG + chr5_3:64963614-64963633 None:intergenic 50.0%
CGGTGATCTCTCTGATGTCG+TGG + chr5_3:64955761-64955780 None:intergenic 55.0%
AGGTCCGTAGTACCCTTCGA+AGG - chr5_3:64956678-64956697 Msa0825240:CDS 55.0%
GGTCCGTAGTACCCTTCGAA+GGG - chr5_3:64956679-64956698 Msa0825240:CDS 55.0%
CAAAACAACGTGGACAGGGG+AGG - chr5_3:64957560-64957579 Msa0825240:intron 55.0%
AAACAACGTGGACAGGGGAG+GGG - chr5_3:64957562-64957581 Msa0825240:intron 55.0%
! GGGGAGCAAGAGGTTTTTCG+GGG - chr5_3:64957581-64957600 Msa0825240:intron 55.0%
!! GGGAGCAAGAGGTTTTTCGG+GGG - chr5_3:64957582-64957601 Msa0825240:intron 55.0%
!!! GGAGCAAGAGGTTTTTCGGG+GGG - chr5_3:64957583-64957602 Msa0825240:intron 55.0%
!! CTCTTGCTAGATGGTGGTGG+TGG - chr5_3:64958061-64958080 Msa0825240:intron 55.0%
!! TTGCTAGATGGTGGTGGTGG+TGG - chr5_3:64958064-64958083 Msa0825240:intron 55.0%
!! TGCTAGATGGTGGTGGTGGT+GGG - chr5_3:64958065-64958084 Msa0825240:intron 55.0%
ACCGTGACCAGACTTCCCAT+TGG + chr5_3:64958711-64958730 None:intergenic 55.0%
TGCCAGCACAGGATCTGAAG+AGG + chr5_3:64958951-64958970 None:intergenic 55.0%
! GAGATAGATGGTGCCAGCAC+AGG + chr5_3:64958962-64958981 None:intergenic 55.0%
! TCCCAGATTCCTGGTGTTGG+CGG - chr5_3:64958980-64958999 Msa0825240:intron 55.0%
ACCGCCAACACCAGGAATCT+GGG + chr5_3:64958984-64959003 None:intergenic 55.0%
!! TGTTGGCGGTGCTGTCAGTA+AGG - chr5_3:64958994-64959013 Msa0825240:intron 55.0%
GGAGTGACCGGATATCTGCT+GGG - chr5_3:64959023-64959042 Msa0825240:intron 55.0%
! AGGTGGTTGGCTAACGCAAC+TGG + chr5_3:64959227-64959246 None:intergenic 55.0%
TGCGTTAGCCAACCACCTCA+AGG - chr5_3:64959229-64959248 Msa0825240:intron 55.0%
CATACTTTGGCTAGACCCGG+TGG + chr5_3:64959458-64959477 None:intergenic 55.0%
CACCGGGTCTAGCCAAAGTA+TGG - chr5_3:64959456-64959475 Msa0825240:intron 55.0%
AGAGTAGGGAGGAGAGGAGA+AGG - chr5_3:64960508-64960527 Msa0825240:CDS 55.0%
GAGTAGGGAGGAGAGGAGAA+GGG - chr5_3:64960509-64960528 Msa0825240:CDS 55.0%
!! GGGAGAGTTTTTGAGGGGTG+TGG - chr5_3:64960623-64960642 Msa0825240:CDS 55.0%
GGTGTGGAGGGGAAGGTTTA+TGG - chr5_3:64960639-64960658 Msa0825240:CDS 55.0%
! GGGGAGACTTTAGAGGGTTG+TGG + chr5_3:64960730-64960749 None:intergenic 55.0%
AGAGAATGGAAGGGGAAGGG+GGG + chr5_3:64960831-64960850 None:intergenic 55.0%
GAGAGAATGGAAGGGGAAGG+GGG + chr5_3:64960832-64960851 None:intergenic 55.0%
GGAGAGAATGGAAGGGGAAG+GGG + chr5_3:64960833-64960852 None:intergenic 55.0%
GAGGAGAGAATGGAAGGGGA+AGG + chr5_3:64960835-64960854 None:intergenic 55.0%
AAGGGAAGGCAGGGTTTGAG+GGG + chr5_3:64960861-64960880 None:intergenic 55.0%
GTAAGGGAAGGCAGGGTTTG+AGG + chr5_3:64960863-64960882 None:intergenic 55.0%
TGATCTCCGTGTTCGGGCAA+TGG + chr5_3:64961091-64961110 None:intergenic 55.0%
GATTGAGCAGCCAAAGCAGG+AGG - chr5_3:64961195-64961214 Msa0825240:intron 55.0%
GTCAGAATTGGATGGCCCTC+GGG + chr5_3:64961232-64961251 None:intergenic 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG - chr5_3:64961899-64961918 Msa0825240:intron 55.0%
GAAGAGGGTTTAGGAGGGGA+AGG + chr5_3:64961899-64961918 None:intergenic 55.0%
TGTAGAGGTGGAGTTGGGCT+GGG + chr5_3:64962747-64962766 None:intergenic 55.0%
GAGCTCTGTAGAGGTGGAGT+TGG + chr5_3:64962753-64962772 None:intergenic 55.0%
!! GAAACGGGCTGTGGAGAAAC+AGG + chr5_3:64962780-64962799 None:intergenic 55.0%
GGGGGTAATAGGGGCCATAT+GGG + chr5_3:64962836-64962855 None:intergenic 55.0%
TTCCCTCAACAGCCATCAGC+TGG - chr5_3:64962900-64962919 Msa0825240:intron 55.0%
GTTCCCTCTCCCGCAATTCA+AGG - chr5_3:64962965-64962984 Msa0825240:intron 55.0%
CAGCCTTGAATTGCGGGAGA+GGG + chr5_3:64962971-64962990 None:intergenic 55.0%
TCGCTCCAGCCTTGAATTGC+GGG + chr5_3:64962977-64962996 None:intergenic 55.0%
TTCAAGGCTGGAGCGAACAC+AGG - chr5_3:64962981-64963000 Msa0825240:intron 55.0%
CCAGTATTCACGGTCGGACT+AGG + chr5_3:64963068-64963087 None:intergenic 55.0%
CCTAGTCCGACCGTGAATAC+TGG - chr5_3:64963065-64963084 Msa0825240:intron 55.0%
AGAGTGAAGGCTCTGCTGTG+TGG - chr5_3:64963375-64963394 Msa0825240:intron 55.0%
GCTGTGTGGATACATGCACC+AGG - chr5_3:64963389-64963408 Msa0825240:intron 55.0%
GCACCAGGCCAAGATATGTC+CGG - chr5_3:64963404-64963423 Msa0825240:intron 55.0%
GGTGAGATGTTGCCCTTGAG+GGG + chr5_3:64963459-64963478 None:intergenic 55.0%
CAGCAGTCTCAAGCTGTTGC+TGG - chr5_3:64963563-64963582 Msa0825240:intron 55.0%
GCTGGGCCTGTTGAAACTGT+AGG - chr5_3:64963581-64963600 Msa0825240:intron 55.0%
GCTGATAAGATCCTGGAGGC+GGG + chr5_3:64963607-64963626 None:intergenic 55.0%
!! TGAAGGGTGCTGCTAGTTGC+AGG - chr5_3:64963825-64963844 Msa0825240:intron 55.0%
GGGGGGGAAAGAACATGTGA+GGG + chr5_3:64963891-64963910 None:intergenic 55.0%
AGGGGGGGAAAGAACATGTG+AGG + chr5_3:64963892-64963911 None:intergenic 55.0%
!! TAGATGGTGGTGGTGGTGGG+AGG - chr5_3:64958068-64958087 Msa0825240:intron 60.0%
ATGCAGCACCCCAAGCCTCA+AGG - chr5_3:64958182-64958201 Msa0825240:intron 60.0%
CACCGCCAACACCAGGAATC+TGG + chr5_3:64958985-64959004 None:intergenic 60.0%
GGGAGTGACCGGATATCTGC+TGG - chr5_3:64959022-64959041 Msa0825240:intron 60.0%
! TTTGAGGGGTGTGGAGGGGA+AGG - chr5_3:64960632-64960651 Msa0825240:CDS 60.0%
GGCAGGGTTTGAGGGGAAAG+AGG + chr5_3:64960854-64960873 None:intergenic 60.0%
TGGGAGGGTAAGGGAAGGCA+GGG + chr5_3:64960870-64960889 None:intergenic 60.0%
TTGGGAGGGTAAGGGAAGGC+AGG + chr5_3:64960871-64960890 None:intergenic 60.0%
GTTCGGGCAATGGTGCGCTT+TGG + chr5_3:64961081-64961100 None:intergenic 60.0%
AGCGCACCATTGCCCGAACA+CGG - chr5_3:64961082-64961101 Msa0825240:intron 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG - chr5_3:64961903-64961922 Msa0825240:intron 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG - chr5_3:64961904-64961923 Msa0825240:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG - chr5_3:64961905-64961924 Msa0825240:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr5_3:64961905-64961924 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr5_3:64961904-64961923 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr5_3:64961903-64961922 None:intergenic 60.0%
CTGTAGAGGTGGAGTTGGGC+TGG + chr5_3:64962748-64962767 None:intergenic 60.0%
GGGGGGTAATAGGGGCCATA+TGG + chr5_3:64962837-64962856 None:intergenic 60.0%
CCAGCCTTGAATTGCGGGAG+AGG + chr5_3:64962972-64962991 None:intergenic 60.0%
CCTCTCCCGCAATTCAAGGC+TGG - chr5_3:64962969-64962988 Msa0825240:intron 60.0%
CAGCAGAGCCTTCACTCTGC+AGG + chr5_3:64963373-64963392 None:intergenic 60.0%
GATGTTGCCCTTGAGGGGCA+AGG + chr5_3:64963454-64963473 None:intergenic 60.0%
TCTCACCTTCCCCCAGACAC+AGG - chr5_3:64963472-64963491 Msa0825240:intron 60.0%
TCCGTGAGCAGCCTGTGTCT+GGG + chr5_3:64963486-64963505 None:intergenic 60.0%
! GCTGCTCACGGAGCATTTCC+CGG - chr5_3:64963494-64963513 Msa0825240:intron 60.0%
GGTGAAGCTACTGTCTGCCC+TGG + chr5_3:64963530-64963549 None:intergenic 60.0%
GGCGGGCCTACAGTTTCAAC+AGG + chr5_3:64963590-64963609 None:intergenic 60.0%
GAAAGAATGAGCGGCGGCCG+CGG - chr5_3:64955681-64955700 Msa0825240:three_prime_UTR 65.0%
!! TGGTGGTGGTGGCGGGTCTA+GGG - chr5_3:64955704-64955723 Msa0825240:three_prime_UTR 65.0%
CTGACAGCACCGCCAACACC+AGG + chr5_3:64958992-64959011 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG - chr5_3:64961908-64961927 Msa0825240:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG - chr5_3:64961909-64961928 Msa0825240:intron 65.0%
TAGGAGGGGAAGGGAGGGGA+GGG + chr5_3:64961909-64961928 None:intergenic 65.0%
TTAGGAGGGGAAGGGAGGGG+AGG + chr5_3:64961908-64961927 None:intergenic 65.0%
AGCAGCCTGTGTCTGGGGGA+AGG + chr5_3:64963480-64963499 None:intergenic 65.0%
CGTGAGCAGCCTGTGTCTGG+GGG + chr5_3:64963484-64963503 None:intergenic 65.0%
CCGTGAGCAGCCTGTGTCTG+GGG + chr5_3:64963485-64963504 None:intergenic 65.0%
CCCCAGACACAGGCTGCTCA+CGG - chr5_3:64963482-64963501 Msa0825240:intron 65.0%
CTCCGTGAGCAGCCTGTGTC+TGG + chr5_3:64963487-64963506 None:intergenic 65.0%
GAAACTGTAGGCCCGCCTCC+AGG - chr5_3:64963593-64963612 Msa0825240:intron 65.0%
!! GTGGTGGTGGTGGCGGGTCT+AGG - chr5_3:64955703-64955722 Msa0825240:three_prime_UTR 70.0%
GGACAGGGGAGGGGAGCAAG+AGG - chr5_3:64957571-64957590 Msa0825240:intron 70.0%
GATCCCAGCAGCTGCAGCCG+CGG + chr5_3:64962943-64962962 None:intergenic 70.0%
AGAATGAGCGGCGGCCGCGG+TGG - chr5_3:64955684-64955703 Msa0825240:three_prime_UTR 75.0%
ACCCGCCACCACCACCACCG+CGG + chr5_3:64955701-64955720 None:intergenic 75.0%
CAGCCGCGGCTGCAGCTGCT+GGG - chr5_3:64962937-64962956 Msa0825240:intron 75.0%
! ATGAGCGGCGGCCGCGGTGG+TGG - chr5_3:64955687-64955706 Msa0825240:three_prime_UTR 80.0%
!!! GGCCGCGGTGGTGGTGGTGG+CGG - chr5_3:64955696-64955715 Msa0825240:three_prime_UTR 80.0%
!!! GCCGCGGTGGTGGTGGTGGC+GGG - chr5_3:64955697-64955716 Msa0825240:three_prime_UTR 80.0%
! CCAGCAGCTGCAGCCGCGGC+TGG + chr5_3:64962939-64962958 None:intergenic 80.0%
! CCAGCCGCGGCTGCAGCTGC+TGG - chr5_3:64962936-64962955 Msa0825240:intron 80.0%
!! AGCGGCGGCCGCGGTGGTGG+TGG - chr5_3:64955690-64955709 Msa0825240:three_prime_UTR 85.0%
!!! GGCGGCCGCGGTGGTGGTGG+TGG - chr5_3:64955693-64955712 Msa0825240:three_prime_UTR 85.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 64955612 64964107 64955612 ID=Msa0825240;Name=Msa0825240
chr5_3 mRNA 64955612 64964107 64955612 ID=Msa0825240-mRNA-1;Parent=Msa0825240;Name=Msa0825240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=75|1|1|1|1|1|9|440|773
chr5_3 exon 64955612 64956342 64955612 ID=Msa0825240-mRNA-1:exon:20301;Parent=Msa0825240-mRNA-1
chr5_3 exon 64956559 64956999 64956559 ID=Msa0825240-mRNA-1:exon:20300;Parent=Msa0825240-mRNA-1
chr5_3 exon 64958347 64958644 64958347 ID=Msa0825240-mRNA-1:exon:20299;Parent=Msa0825240-mRNA-1
chr5_3 exon 64959735 64959984 64959735 ID=Msa0825240-mRNA-1:exon:20298;Parent=Msa0825240-mRNA-1
chr5_3 exon 64960469 64961049 64960469 ID=Msa0825240-mRNA-1:exon:20297;Parent=Msa0825240-mRNA-1
chr5_3 exon 64961516 64961648 64961516 ID=Msa0825240-mRNA-1:exon:20296;Parent=Msa0825240-mRNA-1
chr5_3 exon 64962094 64962193 64962094 ID=Msa0825240-mRNA-1:exon:20295;Parent=Msa0825240-mRNA-1
chr5_3 exon 64962783 64962826 64962783 ID=Msa0825240-mRNA-1:exon:20294;Parent=Msa0825240-mRNA-1
chr5_3 exon 64963849 64964107 64963849 ID=Msa0825240-mRNA-1:exon:20293;Parent=Msa0825240-mRNA-1
chr5_3 five_prime_UTR 64964033 64964107 64964033 ID=Msa0825240-mRNA-1:five_prime_utr;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64963849 64964032 64963849 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64962783 64962826 64962783 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64962094 64962193 64962094 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64961516 64961648 64961516 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64960469 64961049 64960469 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64959735 64959984 64959735 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64958347 64958644 64958347 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64956559 64956999 64956559 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 CDS 64956052 64956342 64956052 ID=Msa0825240-mRNA-1:cds;Parent=Msa0825240-mRNA-1
chr5_3 three_prime_UTR 64955612 64956051 64955612 ID=Msa0825240-mRNA-1:three_prime_utr;Parent=Msa0825240-mRNA-1
Gene Sequence

>Msa0825240

ATGAGCGGCGGCCGCGGTGGTGGTGGTGGCGGGTCTAGGGTTCCGATCCCCAACAATGTACGGAAAACCATCCACGACATCAGAGAGATCACCGGAAAACAACACACCGACGACGAAATCTTCTCCGTTCTTAAAGAATCAAACATGGATCCCAATGAAACTACTCAAAAGCTTCTCTATCTAGATACTTTTCATGAAGTAAGAAGGAGACGCGACCGCAGAAAAGAAGGATTGAGCAGCAGGGTTTCTGAGGAGTCTAGATCAAAACAACGTGGACAGGGGAGGGGAGCAAGAGGTTTTTCGGGGGGCTATTCCTCAAACTTTCCTGATGGTGGTGGTGGTGGGAGGAACCTTCCTATTCGAAGGGAAAATGGAGTCCATCACATTGCAGAGAGAACTCATGCTTCCTCTACTCAGCCAGATTTACAGAAAAACACTAATGCAGCACCCCAAGCCTCAAGAGGTTCAGCTGTTGCACCCCGTAGTGCTGCAAATCAATCCAATGGGAAGTCTGGTCACGGTTCTTCTGGCCAATCTCTTATAGGTAGTGTTGTTAGTGTCCCACAAAGTAGTTCAGCTTCTAATGACACTGTCAATCAAGAAACTGTGCAACCTCAAGCTGTTGTTGTTGCAGCAACCACTTCTCCTACTCAAACCTTTGCCTCAATTACAAGAACTGACCAAGGAAAATCTCTCTCAAGTTCTGATCAACATCAAATTTCTGTACCGGGTGTTTGTTCCTCTTCAGATCCTGTGCTGGCACCATCTATCTCCCAGATTCCTGGTGTTGGCGGTGCTGTCAGTAAGGAAGTAGGGAGTGACCGGATATCTGCTGGGCCAAATCATGTTAAAGGAAACAAACTTGAAGAAGCTGGTGATTTATCAGCATCCGAGAATGATAAGTCCGGGTCCATGAATTCAACAAGCAACCCGAATGCAATACCAAAGTCAAATGAAGTTGAAAGTAACCGGTTATCTGAGCCCTTGCAACTCTCATCGTCTTCATCATTGACTTCCAGTTGCGTTAGCCAACCACCTCAAGATGTTTCTAAAACAGCCAATGTCACAGAGGTCTCAACTTCAGAAGCTCCTGTGCAGTCAACTGAGTTGAGGCAACATGTTACTTTTCCAAACCATTTCCAAGTGCCTGAGGCTTTAAAAGGTGGTCTGACATTTGGAAGCTTCGATACTTTTGATCCAAGTGAAAAATCTAGCAGTGTAACTGGTTGTGACAATAGCACTTCTCCCACTCCTGAATCTTCTTCAGTGAATGCTGAAACTGTTAATTCAAGCAACCAAAGCGCACCATTGCCCGAACACGGAGATCATCTTGATCATGCACATTCTTCATCTTATTTAATTAAAGAGACACTGGCTTCTGAAGGCATATCTATAACTGGTAATGATTCAAAGATTGAGCAGCCAAAGCAGGAGGTATTGTTAACTCCCGAGGGCCATCCAATTCTGACTGTTCAAAGTGCTCAAAACTATGGTTTGAATTTCATGTCTACCATGTTAGGGACTCAGCAAGTTCAATTTGAGGGTAGTGAGCTTCAGGCGCAAGAAACACCACACTTCCCTTCCTTTGTTACTGCAAGTTCTCAGGCTGTGTCTCCCAGCCCAACTCCACCTCTACAGAGCTCTATACCTGTTTCTCCACAGCCCGTTTCTTATTTTAGGCCACCATACCCAGCTAACTTCTTCCCATATGGCCCCTATTACCCCCCAATTTACCTGTCTCCAATGCATCAATTTTTAAGCCACAATGGTTTCCCTCAACAGCCATCAGCTGGTAACATGTATCTACCAGCCGCGGCTGCAGCTGCTGGGATCAAGTTCCCTCTCCCGCAATTCAAGGCTGGAGCGAACACAGGAAATATGGCTCATATTGGAATTCCTTCGGGATCATATATCACTCCACCTGTTGGATATGCTCCTAGTCCGACCGTGAATACTGGAAGCTCTGCCGGAAATGAAGATACTGCAGTGTCTCAGTTGAAAGAAAACCAGATCTATACAACTGGACAACTGAGTGAAGGCTCTGCTGTGTGGATACATGCACCAGGCCAAGATATGTCCGGTTTGCAACTTAATTCTCTATATAACCTTGCCCCTCAAGGGCAACATCTCACCTTCCCCCAGACACAGGCTGCTCACGGAGCATTTCCCGGTATCTATCAACCAGGGCAGACAGTAGCTTCACCTTCTACCCTTTTGCAGCAGTCTCAAGCTGTTGCTGGGCCTGTTGAAACTGTAGGCCCGCCTCCAGGATCTTATCAGCAGCTACCGCCTTCTCAGATCAATTGGAATTCTAATTTTTAG
Protein sequence

>Msa0825240

MSGGRGGGGGGSRVPIPNNVRKTIHDIREITGKQHTDDEIFSVLKESNMDPNETTQKLLYLDTFHEVRRRRDRRKEGLSSRVSEESRSKQRGQGRGARGFSGGYSSNFPDGGGGGRNLPIRRENGVHHIAERTHASSTQPDLQKNTNAAPQASRGSAVAPRSAANQSNGKSGHGSSGQSLIGSVVSVPQSSSASNDTVNQETVQPQAVVVAATTSPTQTFASITRTDQGKSLSSSDQHQISVPGVCSSSDPVLAPSISQIPGVGGAVSKEVGSDRISAGPNHVKGNKLEEAGDLSASENDKSGSMNSTSNPNAIPKSNEVESNRLSEPLQLSSSSSLTSSCVSQPPQDVSKTANVTEVSTSEAPVQSTELRQHVTFPNHFQVPEALKGGLTFGSFDTFDPSEKSSSVTGCDNSTSPTPESSSVNAETVNSSNQSAPLPEHGDHLDHAHSSSYLIKETLASEGISITGNDSKIEQPKQEVLLTPEGHPILTVQSAQNYGLNFMSTMLGTQQVQFEGSELQAQETPHFPSFVTASSQAVSPSPTPPLQSSIPVSPQPVSYFRPPYPANFFPYGPYYPPIYLSPMHQFLSHNGFPQQPSAGNMYLPAAAAAAGIKFPLPQFKAGANTGNMAHIGIPSGSYITPPVGYAPSPTVNTGSSAGNEDTAVSQLKENQIYTTGQLSEGSAVWIHAPGQDMSGLQLNSLYNLAPQGQHLTFPQTQAAHGAFPGIYQPGQTVASPSTLLQQSQAVAGPVETVGPPPGSYQQLPPSQINWNSNF*