Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487610 | KEH32786.1 | 82.400 | 125 | 22 | 0 | 386 | 510 | 460 | 584 | 2.12e-60 | 221 |
| Msa0487610 | KEH32786.1 | 95.673 | 416 | 8 | 2 | 1 | 408 | 1 | 414 | 0.0 | 781 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487610 | sp|O23212|U2A2A_ARATH | 65.396 | 341 | 102 | 8 | 80 | 408 | 27 | 363 | 2.05e-111 | 346 |
| Msa0487610 | sp|O23212|U2A2A_ARATH | 60.606 | 165 | 63 | 1 | 386 | 550 | 409 | 571 | 3.60e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487610 | A0A072UTX0 | 82.400 | 125 | 22 | 0 | 386 | 510 | 460 | 584 | 1.01e-60 | 221 |
| Msa0487610 | A0A072UTX0 | 95.673 | 416 | 8 | 2 | 1 | 408 | 1 | 414 | 0.0 | 781 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0034110 | Msa0487610 | 0.808824 | 2.562155e-50 | -8.615850e-47 |
| Msa0102200 | Msa0487610 | 0.803690 | 3.090803e-49 | -8.615850e-47 |
| Msa0115540 | Msa0487610 | 0.811098 | 8.298256e-51 | -8.615850e-47 |
| Msa0188900 | Msa0487610 | 0.815908 | 7.264058e-52 | -8.615850e-47 |
| Msa0231370 | Msa0487610 | 0.807975 | 3.886400e-50 | -8.615850e-47 |
| Msa0392400 | Msa0487610 | 0.951120 | 3.989299e-109 | -8.615850e-47 |
| Msa0392440 | Msa0487610 | 0.931384 | 4.087492e-94 | -8.615850e-47 |
| Msa0487550 | Msa0487610 | 0.984165 | 8.996887e-160 | -8.615850e-47 |
| Msa0487610 | Msa0820120 | 0.800663 | 1.296856e-48 | -8.615850e-47 |
| Msa0487610 | Msa0909740 | 0.802862 | 4.585590e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487610 | MtrunA17_Chr3g0077591 | 100.000 | 160 | 0 | 0 | 249 | 408 | 1 | 160 | 4.38e-111 | 335 |
| Msa0487610 | MtrunA17_Chr3g0077591 | 88.024 | 167 | 20 | 0 | 386 | 552 | 206 | 372 | 6.04e-102 | 312 |
| Msa0487610 | MtrunA17_Chr4g0013971 | 86.471 | 170 | 23 | 0 | 239 | 408 | 48 | 217 | 1.97e-100 | 310 |
| Msa0487610 | MtrunA17_Chr4g0013971 | 73.054 | 167 | 43 | 1 | 386 | 552 | 263 | 427 | 2.73e-81 | 260 |
| Msa0487610 | MtrunA17_Chr2g0281891 | 56.766 | 303 | 113 | 6 | 108 | 408 | 16 | 302 | 4.99e-87 | 278 |
| Msa0487610 | MtrunA17_Chr2g0281891 | 48.538 | 171 | 74 | 2 | 392 | 551 | 354 | 521 | 1.04e-44 | 165 |
| Msa0487610 | MtrunA17_Chr3g0077601 | 86.755 | 151 | 10 | 2 | 1 | 143 | 1 | 149 | 1.64e-47 | 166 |
| Msa0487610 | MtrunA17_Chr1g0166661 | 23.478 | 345 | 187 | 11 | 217 | 501 | 515 | 842 | 3.15e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0487610 | AT4G36690.2 | 65.396 | 341 | 102 | 8 | 80 | 408 | 27 | 363 | 1.46e-113 | 348 |
| Msa0487610 | AT4G36690.2 | 43.609 | 133 | 68 | 2 | 386 | 513 | 409 | 539 | 1.42e-26 | 114 |
| Msa0487610 | AT4G36690.3 | 65.396 | 341 | 102 | 8 | 80 | 408 | 27 | 363 | 3.39e-113 | 348 |
| Msa0487610 | AT4G36690.3 | 52.525 | 99 | 45 | 1 | 386 | 484 | 409 | 505 | 1.36e-25 | 111 |
| Msa0487610 | AT4G36690.1 | 65.396 | 341 | 102 | 8 | 80 | 408 | 27 | 363 | 2.09e-112 | 346 |
| Msa0487610 | AT4G36690.1 | 60.606 | 165 | 63 | 1 | 386 | 550 | 409 | 571 | 3.66e-63 | 217 |
| Msa0487610 | AT4G36690.4 | 61.398 | 329 | 93 | 10 | 86 | 408 | 41 | 341 | 1.79e-111 | 343 |
| Msa0487610 | AT4G36690.4 | 60.606 | 165 | 63 | 1 | 386 | 550 | 387 | 549 | 2.43e-63 | 217 |
| Msa0487610 | AT1G60900.1 | 80.189 | 212 | 38 | 2 | 199 | 408 | 170 | 379 | 6.98e-97 | 306 |
| Msa0487610 | AT1G60900.1 | 65.000 | 160 | 54 | 1 | 392 | 551 | 431 | 588 | 1.19e-65 | 224 |
| Msa0487610 | AT1G60830.2 | 70.909 | 110 | 32 | 0 | 442 | 551 | 1 | 110 | 6.63e-52 | 173 |
| Msa0487610 | AT1G60830.1 | 70.909 | 110 | 32 | 0 | 442 | 551 | 1 | 110 | 6.63e-52 | 173 |
| Msa0487610 | AT2G33435.1 | 25.114 | 219 | 143 | 4 | 184 | 384 | 763 | 978 | 8.48e-15 | 78.6 |
| Msa0487610 | AT5G16780.3 | 40.833 | 120 | 68 | 2 | 51 | 169 | 28 | 145 | 8.77e-12 | 68.6 |
| Msa0487610 | AT5G16780.1 | 40.833 | 120 | 68 | 2 | 51 | 169 | 28 | 145 | 8.77e-12 | 68.6 |
| Msa0487610 | AT5G16780.2 | 40.833 | 120 | 68 | 2 | 51 | 169 | 28 | 145 | 8.77e-12 | 68.6 |
Find 195 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATATCTGCAGGTAATT+TGG | 0.109716 | 3_4:+6655462 | Msa0487610:intron |
| ATGCAGGGATTATTATATTT+TGG | 0.152376 | 3_4:+6656275 | Msa0487610:three_prime_UTR |
| AAAGAGAGAGACAGAGAAAA+TGG | 0.193147 | 3_4:+6649873 | Msa0487610:exon |
| GGAGAGAAAAGGAGAGAAAA+AGG | 0.195497 | 3_4:+6651264 | Msa0487610:CDS |
| ATCCAAAGCCATTGCATTGC+TGG | 0.249411 | 3_4:-6654450 | None:intergenic |
| GTAGGCAGGGGAAACATATT+TGG | 0.249719 | 3_4:-6653676 | None:intergenic |
| GGACTGAATGGAAGAAAATT+TGG | 0.262626 | 3_4:+6656142 | Msa0487610:CDS |
| CGACAGGAATGCTCCAAATT+TGG | 0.265569 | 3_4:+6655247 | Msa0487610:CDS |
| TATGATCTTCTTCTTGTTGT+TGG | 0.275831 | 3_4:-6649930 | None:intergenic |
| GGACTATCACCTGGCTCTGC+TGG | 0.288932 | 3_4:+6654686 | Msa0487610:CDS |
| CTAATTGTGTTCTTGTTACT+TGG | 0.313146 | 3_4:+6656228 | Msa0487610:exon |
| TGACAAGAAGTTTGCCTTTG+TGG | 0.314678 | 3_4:+6654406 | Msa0487610:CDS |
| GGTTAGGTTGGCTTGGCCCT+AGG | 0.315523 | 3_4:-6654640 | None:intergenic |
| CTAAGCCCAGATTAAGGTTT+GGG | 0.324353 | 3_4:-6654661 | None:intergenic |
| AACTTTCTTCAGTCAGGTTA+TGG | 0.329007 | 3_4:+6654322 | Msa0487610:CDS |
| GTCCAACTAAGCCCAGATTA+AGG | 0.333587 | 3_4:-6654667 | None:intergenic |
| GACTATCACCTGGCTCTGCT+GGG | 0.339084 | 3_4:+6654687 | Msa0487610:CDS |
| GTACTTGCAGGTCAGATCTC+TGG | 0.343612 | 3_4:+6653625 | Msa0487610:intron |
| ACCTAACCCAAACCTTAATC+TGG | 0.348497 | 3_4:+6654655 | Msa0487610:CDS |
| GGGGCAAGTCCTGCTATTCC+TGG | 0.350763 | 3_4:+6653646 | Msa0487610:CDS |
| GGTTCTACCAAAGCCCGTTC+TGG | 0.352285 | 3_4:+6656121 | Msa0487610:CDS |
| AGAGAAAAGGAGCGGGAGAA+TGG | 0.360404 | 3_4:+6651242 | Msa0487610:CDS |
| ATGCTCTCTTGTTCAGGTTT+AGG | 0.362273 | 3_4:-6654980 | None:intergenic |
| GCAGGGACAGGGTCAGAGAT+AGG | 0.363846 | 3_4:+6651360 | Msa0487610:CDS |
| TACTTGCAGGTCAGATCTCT+GGG | 0.364212 | 3_4:+6653626 | Msa0487610:intron |
| GAGAAAAGGAGCGGGAGAAT+GGG | 0.371959 | 3_4:+6651243 | Msa0487610:CDS |
| TTGGGTGCTACTGGTGTTGC+AGG | 0.372909 | 3_4:+6652911 | Msa0487610:CDS |
| TGTTCAGGTTTAGGCTGCAT+TGG | 0.376618 | 3_4:-6654971 | None:intergenic |
| TCTCCCTGTCTTGCCAGTTC+AGG | 0.382609 | 3_4:+6653805 | Msa0487610:CDS |
| AAAGGGATAAGGGAAGAGAC+AGG | 0.384703 | 3_4:+6651282 | Msa0487610:CDS |
| CCCTGAGCAAATTTGTTCTC+TGG | 0.391081 | 3_4:-6656193 | None:intergenic |
| ATTAAAATGCTCTCTTGTTC+AGG | 0.391630 | 3_4:-6654986 | None:intergenic |
| GTTCAGGTTTAGGCTGCATT+GGG | 0.392860 | 3_4:-6654970 | None:intergenic |
| AACATATTTGGAAACATTCC+AGG | 0.392880 | 3_4:-6653664 | None:intergenic |
| TTGGAGTATGCTGATGTTGA+TGG | 0.396211 | 3_4:+6656100 | Msa0487610:CDS |
| AGCCAGCAATGCAATGGCTT+TGG | 0.400570 | 3_4:+6654448 | Msa0487610:CDS |
| TCAGAGATAGGGAGAGAAGC+AGG | 0.402248 | 3_4:+6651372 | Msa0487610:CDS |
| TGTTCTAATACAATAATACT+TGG | 0.404534 | 3_4:+6656369 | Msa0487610:three_prime_UTR |
| TCATCATCTTTGAGCTCATC+AGG | 0.405363 | 3_4:-6655196 | None:intergenic |
| GTTTCCCCTGCCTACAAATC+AGG | 0.406555 | 3_4:+6653684 | Msa0487610:CDS |
| ACAGAGAGAGTGAGAGAAGC+AGG | 0.408072 | 3_4:+6651342 | Msa0487610:CDS |
| TCAACAGGTGGTGGTGGTGG+TGG | 0.412949 | 3_4:-6649979 | None:intergenic |
| TTTATTCAAGATTTATATGC+AGG | 0.413958 | 3_4:+6656259 | Msa0487610:three_prime_UTR |
| AGTCAGGTTATGGCTACAAT+TGG | 0.415102 | 3_4:+6654332 | Msa0487610:CDS |
| CCGTCTCTAGCTGCTGCCCT+AGG | 0.416793 | 3_4:+6654623 | Msa0487610:CDS |
| AGTTGCAACTTTCTTCAGTC+AGG | 0.418446 | 3_4:+6654316 | Msa0487610:CDS |
| TCACCATCAGGCCGTGGGCG+AGG | 0.421457 | 3_4:-6655499 | None:intergenic |
| TCCAGAGAACAAATTTGCTC+AGG | 0.424734 | 3_4:+6656192 | Msa0487610:CDS |
| ATAGGGAGAGAAGCAGGGAC+AGG | 0.428035 | 3_4:+6651378 | Msa0487610:CDS |
| TCTTCCATTCAGTCCAGAAC+GGG | 0.431470 | 3_4:-6656134 | None:intergenic |
| ACTAAGCCCAGATTAAGGTT+TGG | 0.432382 | 3_4:-6654662 | None:intergenic |
| GTTAGGTTGGCTTGGCCCTA+GGG | 0.433054 | 3_4:-6654639 | None:intergenic |
| ACCTTTGTTGCCACCAATGC+TGG | 0.434466 | 3_4:-6655148 | None:intergenic |
| AACCTTAATCTGGGCTTAGT+TGG | 0.436600 | 3_4:+6654665 | Msa0487610:CDS |
| GCGGGAGAATGGGAGAGAAA+AGG | 0.437926 | 3_4:+6651253 | Msa0487610:CDS |
| ATAGGGATAGGGAGAAAAGC+AGG | 0.441332 | 3_4:+6651318 | Msa0487610:CDS |
| ACAGGGAACGCGATCGGGAT+GGG | 0.441548 | 3_4:+6651426 | Msa0487610:CDS |
| GTGAGATCTTCTTCATCAAC+AGG | 0.443011 | 3_4:-6649994 | None:intergenic |
| ATAGCCTGAACTGGCAAGAC+AGG | 0.443744 | 3_4:-6653809 | None:intergenic |
| GTGAGAGAAAGGAAAGGGTA+AGG | 0.445978 | 3_4:+6651510 | Msa0487610:CDS |
| CAAAGACAGGGAACGCGATC+GGG | 0.446135 | 3_4:+6651421 | Msa0487610:CDS |
| AAAATACCTGATTTGTAGGC+AGG | 0.446527 | 3_4:-6653690 | None:intergenic |
| CCCAGATTAAGGTTTGGGTT+AGG | 0.447397 | 3_4:-6654656 | None:intergenic |
| AGGTTTGGGTTAGGTTGGCT+TGG | 0.448251 | 3_4:-6654647 | None:intergenic |
| TGCATTGCTGGCTTCTTCAA+CGG | 0.451937 | 3_4:-6654438 | None:intergenic |
| TCATCAACAGGTGGTGGTGG+TGG | 0.453350 | 3_4:-6649982 | None:intergenic |
| AAGAGAGAGACAGAGAAAAT+GGG | 0.457112 | 3_4:+6649874 | Msa0487610:exon |
| ATTCAGTCCAGAACGGGCTT+TGG | 0.457567 | 3_4:-6656128 | None:intergenic |
| ATCCCTCGCCCACGGCCTGA+TGG | 0.463255 | 3_4:+6655496 | Msa0487610:CDS |
| AAATACGTTGGATTTGGAAT+CGG | 0.463999 | 3_4:-6650016 | None:intergenic |
| ATAGAAGCAGGGATAGGGAT+AGG | 0.464430 | 3_4:+6651306 | Msa0487610:CDS |
| AGGGTGCACCAGTGAAGGTC+AGG | 0.465241 | 3_4:+6654582 | Msa0487610:intron |
| CAGGGAACGCGATCGGGATG+GGG | 0.465625 | 3_4:+6651427 | Msa0487610:CDS |
| AAGCAAACCTTTCCAACTCC+AGG | 0.469840 | 3_4:-6655529 | None:intergenic |
| CCTGATGGTGAACTGTGCCC+TGG | 0.472461 | 3_4:+6655511 | Msa0487610:CDS |
| GCAAAGACAGGGAACGCGAT+CGG | 0.473825 | 3_4:+6651420 | Msa0487610:CDS |
| CACAGTTCACCATCAGGCCG+TGG | 0.474395 | 3_4:-6655505 | None:intergenic |
| GATTAAGGTTTGGGTTAGGT+TGG | 0.474494 | 3_4:-6654652 | None:intergenic |
| AGAGTGAGAGAAGCAGGGAC+AGG | 0.475476 | 3_4:+6651348 | Msa0487610:CDS |
| ACGCGATCGGGATGGGGAGA+AGG | 0.475708 | 3_4:+6651433 | Msa0487610:CDS |
| CACCATCAGGCCGTGGGCGA+GGG | 0.476970 | 3_4:-6655498 | None:intergenic |
| ATCGGGATGGGGAGAAGGAA+AGG | 0.478929 | 3_4:+6651438 | Msa0487610:CDS |
| ATCCTCCAGAAGTAGAGAAA+AGG | 0.482000 | 3_4:+6651229 | Msa0487610:CDS |
| GGAGGAAACACCGCTGGTCC+AGG | 0.482975 | 3_4:+6654353 | Msa0487610:CDS |
| ACAGGGATAGAAGCAGGGAT+AGG | 0.486106 | 3_4:+6651300 | Msa0487610:CDS |
| GAAGAGACAGGGATAGAAGC+AGG | 0.487067 | 3_4:+6651294 | Msa0487610:CDS |
| TCTTCATCAACAGGTGGTGG+TGG | 0.488161 | 3_4:-6649985 | None:intergenic |
| CCAGGGCACAGTTCACCATC+AGG | 0.489395 | 3_4:-6655511 | None:intergenic |
| GTAGGTCTCCTGACCTTCAC+TGG | 0.489485 | 3_4:-6654590 | None:intergenic |
| ATGGGGAGAAGGAAAGGGAG+AGG | 0.489505 | 3_4:+6651444 | Msa0487610:CDS |
| TAGAAGCAGGGATAGGGATA+GGG | 0.492088 | 3_4:+6651307 | Msa0487610:CDS |
| ACAGCAGCAGATTGCTCTGC+AGG | 0.492821 | 3_4:+6655015 | Msa0487610:CDS |
| CTCTATGATGGTCACGGTCA+CGG | 0.497953 | 3_4:-6651469 | None:intergenic |
| CACCCAATATCGCAGAAGTA+GGG | 0.498077 | 3_4:-6652895 | None:intergenic |
| ATAGTGAGAAAAGCAAAGAC+AGG | 0.498726 | 3_4:+6651408 | Msa0487610:CDS |
| GTTCTCGTTCACGCTCCAAA+AGG | 0.501480 | 3_4:+6651878 | Msa0487610:CDS |
| TCTGCGATATTGGGTGCTAC+TGG | 0.502664 | 3_4:+6652902 | Msa0487610:CDS |
| GGAAACATTCCAGGAATAGC+AGG | 0.503610 | 3_4:-6653655 | None:intergenic |
| ATTAGAACAAATCCTCCATC+AGG | 0.508317 | 3_4:-6656355 | None:intergenic |
| TGTTGTGTCATAGCCTGAAC+TGG | 0.509316 | 3_4:-6653818 | None:intergenic |
| CAGGGACAGGGTCAGAGATA+GGG | 0.509318 | 3_4:+6651361 | Msa0487610:CDS |
| CAGGTTATGGCTACAATTGG+AGG | 0.509339 | 3_4:+6654335 | Msa0487610:CDS |
| TAGGGAGAGAAGCAGGGACA+GGG | 0.509753 | 3_4:+6651379 | Msa0487610:CDS |
| CAGGGATCGTAGTGAGAGAA+AGG | 0.516139 | 3_4:+6651499 | Msa0487610:CDS |
| CAGGGATAGAAGCAGGGATA+GGG | 0.516826 | 3_4:+6651301 | Msa0487610:CDS |
| AGTTTGCCTTTGTGGAAATG+AGG | 0.516873 | 3_4:+6654414 | Msa0487610:CDS |
| GCACCCAATATCGCAGAAGT+AGG | 0.517661 | 3_4:-6652896 | None:intergenic |
| TCGGGATGGGGAGAAGGAAA+GGG | 0.521356 | 3_4:+6651439 | Msa0487610:CDS |
| TTTGCTCAGGGCGATTATGA+AGG | 0.523159 | 3_4:+6656205 | Msa0487610:CDS |
| GGCTTAGTTGGACTATCACC+TGG | 0.524073 | 3_4:+6654677 | Msa0487610:CDS |
| TATGTTACAACCAGCATTGG+TGG | 0.524223 | 3_4:+6655138 | Msa0487610:CDS |
| CTCTCCTACAGCTAATGAGC+AGG | 0.525438 | 3_4:+6653987 | Msa0487610:CDS |
| AGTTCAGGCTATGACACAAC+AGG | 0.528917 | 3_4:+6653820 | Msa0487610:CDS |
| GGTGAACTGTGCCCTGGAGT+TGG | 0.530525 | 3_4:+6655517 | Msa0487610:CDS |
| GGATTTCTAATGAATTATTG+TGG | 0.530896 | 3_4:+6656296 | Msa0487610:three_prime_UTR |
| AAAGCCCGTTCTGGACTGAA+TGG | 0.531994 | 3_4:+6656130 | Msa0487610:CDS |
| ATGATCGAGAGGATAGGCAT+AGG | 0.534779 | 3_4:+6651791 | Msa0487610:CDS |
| GATTCTTGATGATATGCGAC+AGG | 0.535785 | 3_4:+6655231 | Msa0487610:CDS |
| TCGTAGTGAGAGAAAGGAAA+GGG | 0.539193 | 3_4:+6651505 | Msa0487610:CDS |
| ACTTATGTTACAACCAGCAT+TGG | 0.539237 | 3_4:+6655135 | Msa0487610:CDS |
| AATTCAGGGTGCACCAGTGA+AGG | 0.539964 | 3_4:+6654577 | Msa0487610:intron |
| CGTCTCTAGCTGCTGCCCTA+GGG | 0.541292 | 3_4:+6654624 | Msa0487610:CDS |
| GACAGGGAACGCGATCGGGA+TGG | 0.543148 | 3_4:+6651425 | Msa0487610:CDS |
| CCCTGTGGCGATCTCTATGA+TGG | 0.547978 | 3_4:-6651481 | None:intergenic |
| AGGGAGAGAAGCAGGGACAG+GGG | 0.548129 | 3_4:+6651380 | Msa0487610:CDS |
| ACTATCACCTGGCTCTGCTG+GGG | 0.549414 | 3_4:+6654688 | Msa0487610:CDS |
| CTCGATCTAGATCAAGGTCA+AGG | 0.550814 | 3_4:+6651827 | Msa0487610:CDS |
| GGGGACTTGATGGTCCTGAT+CGG | 0.551785 | 3_4:+6654708 | Msa0487610:CDS |
| CAGAAGTAGAGAAAAGGAGC+GGG | 0.551899 | 3_4:+6651235 | Msa0487610:CDS |
| CTATCACCTGGCTCTGCTGG+GGG | 0.554838 | 3_4:+6654689 | Msa0487610:CDS |
| AAATACCTGATTTGTAGGCA+GGG | 0.555176 | 3_4:-6653689 | None:intergenic |
| TGAGAGAAAGGAAAGGGTAA+GGG | 0.556831 | 3_4:+6651511 | Msa0487610:CDS |
| CAAAGGCAAACTTCTTGTCA+TGG | 0.559361 | 3_4:-6654403 | None:intergenic |
| ACATTCACAACTGCATCACC+TGG | 0.561956 | 3_4:-6654371 | None:intergenic |
| GGCTACACGACATGCTAGAC+GGG | 0.562074 | 3_4:+6653948 | Msa0487610:intron |
| CCTAACCCAAACCTTAATCT+GGG | 0.564603 | 3_4:+6654656 | Msa0487610:CDS |
| TTCTTCCATTCAGTCCAGAA+CGG | 0.564603 | 3_4:-6656135 | None:intergenic |
| TGGGGAGAAGGAAAGGGAGA+GGG | 0.564967 | 3_4:+6651445 | Msa0487610:CDS |
| TGTTTGTTGGTATAGACGAA+GGG | 0.568551 | 3_4:+6651765 | Msa0487610:intron |
| AGCAATGCAATGGCTTTGGA+TGG | 0.568787 | 3_4:+6654452 | Msa0487610:CDS |
| ACAGAAGCCGAGGCTATGAC+AGG | 0.570049 | 3_4:+6651555 | Msa0487610:CDS |
| GCCGGTCTCGATCTAGATCA+AGG | 0.570517 | 3_4:+6651821 | Msa0487610:CDS |
| ACCAGCATTGGTGGCAACAA+AGG | 0.576598 | 3_4:+6655147 | Msa0487610:CDS |
| AAGACAGGGAGAGCACTAAA+CGG | 0.578187 | 3_4:-6653794 | None:intergenic |
| TGATGAGCTCAAAGATGATG+AGG | 0.579099 | 3_4:+6655198 | Msa0487610:CDS |
| AATACCTGATTTGTAGGCAG+GGG | 0.580602 | 3_4:-6653688 | None:intergenic |
| ATGTGGTGATCCCTCGCCCA+CGG | 0.581857 | 3_4:+6655488 | Msa0487610:CDS |
| CTGAATGGAAGAAAATTTGG+TGG | 0.582325 | 3_4:+6656145 | Msa0487610:CDS |
| CCAGAGAACAAATTTGCTCA+GGG | 0.582597 | 3_4:+6656193 | Msa0487610:CDS |
| TGCAGGTAATTTGGTTAATG+TGG | 0.583315 | 3_4:+6655471 | Msa0487610:intron |
| ACCTTGATCTAGATCGAGAC+CGG | 0.584536 | 3_4:-6651822 | None:intergenic |
| GAGTGAGAGAAGCAGGGACA+GGG | 0.585097 | 3_4:+6651349 | Msa0487610:CDS |
| TCTTCTTCATCAACAGGTGG+TGG | 0.585996 | 3_4:-6649988 | None:intergenic |
| GGGAGTATGATCGAGAGGAT+AGG | 0.586837 | 3_4:+6651785 | Msa0487610:CDS |
| GGCGATCTCTATGATGGTCA+CGG | 0.587032 | 3_4:-6651475 | None:intergenic |
| TTATTCAAGATTTATATGCA+GGG | 0.587387 | 3_4:+6656260 | Msa0487610:three_prime_UTR |
| ATCGTAGTGAGAGAAAGGAA+AGG | 0.592512 | 3_4:+6651504 | Msa0487610:CDS |
| CCTAGGGCAGCAGCTAGAGA+CGG | 0.592863 | 3_4:-6654623 | None:intergenic |
| ACCATCATAGAGATCGCCAC+AGG | 0.594034 | 3_4:+6651480 | Msa0487610:CDS |
| CTCGATCTGAGCATAGATCA+AGG | 0.594382 | 3_4:+6651851 | Msa0487610:CDS |
| AACTGCATCACCTGGACCAG+CGG | 0.595274 | 3_4:-6654363 | None:intergenic |
| TGAAGAAGCCAGCAATGCAA+TGG | 0.598626 | 3_4:+6654442 | Msa0487610:CDS |
| AAGGGATAAGGGAAGAGACA+GGG | 0.599153 | 3_4:+6651283 | Msa0487610:CDS |
| ACTTACAGCAAAAGGACTAG+TGG | 0.602947 | 3_4:+6652857 | Msa0487610:intron |
| ATTACCTGCTCATTAGCTGT+AGG | 0.603989 | 3_4:-6653991 | None:intergenic |
| GCTAGACGGGTGTATGTTGG+TGG | 0.606173 | 3_4:+6653961 | Msa0487610:CDS |
| ACCCAATATCGCAGAAGTAG+GGG | 0.606263 | 3_4:-6652894 | None:intergenic |
| CAGAGATAGGGAGAGAAGCA+GGG | 0.607054 | 3_4:+6651373 | Msa0487610:CDS |
| ACAGTTCACCATCAGGCCGT+GGG | 0.609862 | 3_4:-6655504 | None:intergenic |
| AGGCTACACGACATGCTAGA+CGG | 0.614733 | 3_4:+6653947 | Msa0487610:intron |
| ACAATTGGAGGAAACACCGC+TGG | 0.618666 | 3_4:+6654347 | Msa0487610:CDS |
| AGCAAACCTTTCCAACTCCA+GGG | 0.618687 | 3_4:-6655528 | None:intergenic |
| CCCAATATCGCAGAAGTAGG+GGG | 0.619164 | 3_4:-6652893 | None:intergenic |
| GAGAGGATAGGCATAGGAGT+AGG | 0.619167 | 3_4:+6651797 | Msa0487610:CDS |
| TCAGCTGGAATAGCACCTGA+TGG | 0.621294 | 3_4:+6656340 | Msa0487610:three_prime_UTR |
| CAGAGAGAGTGAGAGAAGCA+GGG | 0.625664 | 3_4:+6651343 | Msa0487610:CDS |
| ACTGTGCCCTGGAGTTGGAA+AGG | 0.629409 | 3_4:+6655522 | Msa0487610:CDS |
| CATGCTAGACGGGTGTATGT+TGG | 0.630630 | 3_4:+6653958 | Msa0487610:CDS |
| AAGAGACAGGGATAGAAGCA+GGG | 0.631073 | 3_4:+6651295 | Msa0487610:CDS |
| GCTCATTAGCTGTAGGAGAG+AGG | 0.632892 | 3_4:-6653984 | None:intergenic |
| TCGATCTAGATCAAGGTCAA+GGG | 0.634343 | 3_4:+6651828 | Msa0487610:CDS |
| TAGGGATAGGGAGAAAAGCA+GGG | 0.634757 | 3_4:+6651319 | Msa0487610:CDS |
| GCTGGAATAGCACCTGATGG+AGG | 0.636746 | 3_4:+6656343 | Msa0487610:three_prime_UTR |
| ACGAAGGGAGTATGATCGAG+AGG | 0.637703 | 3_4:+6651780 | Msa0487610:CDS |
| TAGCCTGAACTGGCAAGACA+GGG | 0.642494 | 3_4:-6653808 | None:intergenic |
| TAGTGAGAAAAGCAAAGACA+GGG | 0.650122 | 3_4:+6651409 | Msa0487610:CDS |
| AACGGACCTCATTTCCACAA+AGG | 0.654413 | 3_4:-6654420 | None:intergenic |
| GATGATTATCACAGAAGCCG+AGG | 0.655256 | 3_4:+6651545 | Msa0487610:CDS |
| CCAGAAGTAGAGAAAAGGAG+CGG | 0.658550 | 3_4:+6651234 | Msa0487610:CDS |
| AGATCTTCTTCATCAACAGG+TGG | 0.670030 | 3_4:-6649991 | None:intergenic |
| AGAGACGGATTATAATCAGT+AGG | 0.689160 | 3_4:-6654608 | None:intergenic |
| TTCTCTCACTACGATCCCTG+TGG | 0.694836 | 3_4:-6651496 | None:intergenic |
| CCATCATAGAGATCGCCACA+GGG | 0.695430 | 3_4:+6651481 | Msa0487610:CDS |
| ATAGGCATAGGAGTAGGCGC+CGG | 0.701001 | 3_4:+6651803 | Msa0487610:CDS |
| ACTTGCAGGTCAGATCTCTG+GGG | 0.748107 | 3_4:+6653627 | Msa0487610:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTGAAATTCAATTATAA+CGG | + | chr3_4:6650101-6650120 | Msa0487610:intron | 10.0% |
| !!! | GATTAAAATTTTGAAATTTT+AGG | - | chr3_4:6650286-6650305 | None:intergenic | 10.0% |
| !!! | ATTTTAAGATTTTTCATTTT+AGG | + | chr3_4:6650607-6650626 | Msa0487610:intron | 10.0% |
| !! | GTTAGATAATAAATAAATAT+TGG | - | chr3_4:6651743-6651762 | None:intergenic | 10.0% |
| !!! | ATTTTGAAAAGAAAAAAAAA+TGG | + | chr3_4:6655925-6655944 | Msa0487610:intron | 10.0% |
| !!! | TTTTGAAAAGAAAAAAAAAT+GGG | + | chr3_4:6655926-6655945 | Msa0487610:intron | 10.0% |
| !!! | TGAATATTTTTTTTTGTTTT+TGG | + | chr3_4:6656014-6656033 | Msa0487610:intron | 10.0% |
| !!! | GAATATTTTTTTTTGTTTTT+GGG | + | chr3_4:6656015-6656034 | Msa0487610:intron | 10.0% |
| !! | TGATTGAAATTGAAAAATAA+AGG | - | chr3_4:6650058-6650077 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTTCAATCAATT+AGG | + | chr3_4:6650061-6650080 | Msa0487610:intron | 15.0% |
| !!! | TTTTCAATTTCAATCAATTA+GGG | + | chr3_4:6650062-6650081 | Msa0487610:intron | 15.0% |
| !! | ATTCAATTGTATGATTATTT+AGG | + | chr3_4:6650172-6650191 | Msa0487610:intron | 15.0% |
| !! | TTCAATTGTATGATTATTTA+GGG | + | chr3_4:6650173-6650192 | Msa0487610:intron | 15.0% |
| !! | AATTGTATGATTGATTAATT+AGG | + | chr3_4:6650210-6650229 | Msa0487610:intron | 15.0% |
| !! | ATTGTATGATTGATTAATTA+GGG | + | chr3_4:6650211-6650230 | Msa0487610:intron | 15.0% |
| !!! | TATTAAAGTTTTGCAATTTT+AGG | + | chr3_4:6650394-6650413 | Msa0487610:intron | 15.0% |
| !! | TTCAAAATTTCTTATGTAAA+GGG | - | chr3_4:6650960-6650979 | None:intergenic | 15.0% |
| !! | ATTCAAAATTTCTTATGTAA+AGG | - | chr3_4:6650961-6650980 | None:intergenic | 15.0% |
| !! | AAGAAGAAAAAAAAAACAAT+AGG | - | chr3_4:6651049-6651068 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTGTTTGTTTTT+TGG | + | chr3_4:6651171-6651190 | Msa0487610:intron | 15.0% |
| !! | TGAATAGAAATTATAACAAT+TGG | - | chr3_4:6651707-6651726 | None:intergenic | 15.0% |
| !!! | TCCATAAGATTTTTTTATTT+AGG | + | chr3_4:6651916-6651935 | Msa0487610:intron | 15.0% |
| !! | ACCTAAATAAAAAAATCTTA+TGG | - | chr3_4:6651920-6651939 | None:intergenic | 15.0% |
| !! | ATAAATATACATTCAACTAT+TGG | + | chr3_4:6652318-6652337 | Msa0487610:intron | 15.0% |
| !!! | TAATTTAACCTTTTAATGTA+AGG | + | chr3_4:6652594-6652613 | Msa0487610:intron | 15.0% |
| !!! | ATTTGAAATAATGAATATAC+AGG | - | chr3_4:6652664-6652683 | None:intergenic | 15.0% |
| !! | TTCATTATTTCAAATTTCAT+AGG | + | chr3_4:6652669-6652688 | Msa0487610:intron | 15.0% |
| !! | AAAATTCATATCAAATTACA+TGG | + | chr3_4:6653023-6653042 | Msa0487610:intron | 15.0% |
| !!! | TGTAATTTCATTTTTAATTC+AGG | + | chr3_4:6654562-6654581 | Msa0487610:intron | 15.0% |
| !!! | GTAATTTCATTTTTAATTCA+GGG | + | chr3_4:6654563-6654582 | Msa0487610:intron | 15.0% |
| !! | CGATTATATATAATAAATTG+TGG | + | chr3_4:6656043-6656062 | Msa0487610:intron | 15.0% |
| !! | GAAATTGAAAAATAAAGGAA+CGG | - | chr3_4:6650053-6650072 | None:intergenic | 20.0% |
| !! | TCAATTGTATGATTATTTAG+GGG | + | chr3_4:6650174-6650193 | Msa0487610:intron | 20.0% |
| !!! | TTTAGAATATTGATAACCTA+AGG | + | chr3_4:6650422-6650441 | Msa0487610:intron | 20.0% |
| !! | TCATATAACTTTACAATTTC+TGG | + | chr3_4:6650446-6650465 | Msa0487610:intron | 20.0% |
| !! | CCAAAATTTCTATTTGAAAA+GGG | - | chr3_4:6650682-6650701 | None:intergenic | 20.0% |
| !! | ACCAAAATTTCTATTTGAAA+AGG | - | chr3_4:6650683-6650702 | None:intergenic | 20.0% |
| !! | TATCACAATTGTTTCAATTT+CGG | + | chr3_4:6650709-6650728 | Msa0487610:intron | 20.0% |
| !!! | TTCATTAAAATCGAACTTTT+TGG | - | chr3_4:6650891-6650910 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTAGTGAATAG+AGG | + | chr3_4:6650916-6650935 | Msa0487610:intron | 20.0% |
| !!! | TATTTTTGTTAGTGAATAGA+GGG | + | chr3_4:6650917-6650936 | Msa0487610:intron | 20.0% |
| !!! | TGATGATGCATATAAAATTT+AGG | - | chr3_4:6651109-6651128 | None:intergenic | 20.0% |
| !! | TATTATCTAACATTGTTTGT+TGG | + | chr3_4:6651752-6651771 | Msa0487610:intron | 20.0% |
| !!! | AGAACTTGAAATTTTACAAA+TGG | - | chr3_4:6651976-6651995 | None:intergenic | 20.0% |
| !!! | CACTGTTCATTATAAAATTT+TGG | + | chr3_4:6652523-6652542 | Msa0487610:intron | 20.0% |
| !! | GTAATATTCCTTACATTAAA+AGG | - | chr3_4:6652605-6652624 | None:intergenic | 20.0% |
| !! | ATTATTTCAAATTTCATAGG+TGG | + | chr3_4:6652672-6652691 | Msa0487610:intron | 20.0% |
| !! | ATCCAACACAAATAAAAAAT+GGG | - | chr3_4:6652744-6652763 | None:intergenic | 20.0% |
| !! | AAAATTATAATATAGCAGTG+AGG | + | chr3_4:6653473-6653492 | Msa0487610:intron | 20.0% |
| !!! | CATTTTTGTTTGTCTTTTTA+AGG | + | chr3_4:6653766-6653785 | Msa0487610:intron | 20.0% |
| !! | TGAGTTTCAGTAAAATAATA+AGG | - | chr3_4:6654752-6654771 | None:intergenic | 20.0% |
| !! | AACACAAAAATTACCAAATT+TGG | - | chr3_4:6655263-6655282 | None:intergenic | 20.0% |
| !! | TAAAAGACTGAAAATTATGA+AGG | - | chr3_4:6655385-6655404 | None:intergenic | 20.0% |
| !! | TAGAGAATTTCCAAAATAAT+AGG | - | chr3_4:6655561-6655580 | None:intergenic | 20.0% |
| !! | AATGAGTTAAACACATAAAT+TGG | - | chr3_4:6655802-6655821 | None:intergenic | 20.0% |
| !! | TTTATTCAAGATTTATATGC+AGG | + | chr3_4:6656259-6656278 | Msa0487610:three_prime_UTR | 20.0% |
| !! | TTATTCAAGATTTATATGCA+GGG | + | chr3_4:6656260-6656279 | Msa0487610:three_prime_UTR | 20.0% |
| !! | TGTTCTAATACAATAATACT+TGG | + | chr3_4:6656369-6656388 | Msa0487610:three_prime_UTR | 20.0% |
| ! | TTTAATCAAATTTGACCCTT+TGG | + | chr3_4:6650299-6650318 | Msa0487610:intron | 25.0% |
| ! | TTAATCAAATTTGACCCTTT+GGG | + | chr3_4:6650300-6650319 | Msa0487610:intron | 25.0% |
| !!! | TGCATTAAGTTGGTATTATT+AGG | + | chr3_4:6650343-6650362 | Msa0487610:intron | 25.0% |
| !!! | GCATTAAGTTGGTATTATTA+GGG | + | chr3_4:6650344-6650363 | Msa0487610:intron | 25.0% |
| ! | TGTAAAGTTATATGAACCTT+AGG | - | chr3_4:6650441-6650460 | None:intergenic | 25.0% |
| !!! | ACTTTACAATTTCTGGTAAT+TGG | + | chr3_4:6650453-6650472 | Msa0487610:intron | 25.0% |
| !!! | CTTTACAATTTCTGGTAATT+GGG | + | chr3_4:6650454-6650473 | Msa0487610:intron | 25.0% |
| !! | CCCTTTTCAAATAGAAATTT+TGG | + | chr3_4:6650679-6650698 | Msa0487610:intron | 25.0% |
| !!! | AGAGAAAAAATGTCACTTTT+GGG | - | chr3_4:6650771-6650790 | None:intergenic | 25.0% |
| !!! | TAGAGAAAAAATGTCACTTT+TGG | - | chr3_4:6650772-6650791 | None:intergenic | 25.0% |
| ! | AGCAAAAAAATATCACTTGT+GGG | + | chr3_4:6650804-6650823 | Msa0487610:intron | 25.0% |
| !!! | AAAGTTCGATTTTAATGAAG+AGG | + | chr3_4:6650892-6650911 | Msa0487610:intron | 25.0% |
| !! | AGAAATTTTGAATTGCTAGA+TGG | + | chr3_4:6650968-6650987 | Msa0487610:intron | 25.0% |
| ! | TATCATCAAATTGGAAGATA+TGG | + | chr3_4:6651133-6651152 | Msa0487610:intron | 25.0% |
| ! | ATCATCAAATTGGAAGATAT+GGG | + | chr3_4:6651134-6651153 | Msa0487610:intron | 25.0% |
| !!! | GTAAAAGTTATTTTCTGGTT+TGG | + | chr3_4:6651577-6651596 | Msa0487610:intron | 25.0% |
| ! | AAAATCTTATGGATCTTTCT+GGG | - | chr3_4:6651909-6651928 | None:intergenic | 25.0% |
| ! | AAAAATCTTATGGATCTTTC+TGG | - | chr3_4:6651910-6651929 | None:intergenic | 25.0% |
| ! | TTCGTTCAACAAATAGTTAA+AGG | + | chr3_4:6651998-6652017 | Msa0487610:intron | 25.0% |
| ! | ACATGAGAACTGTAATAAAA+TGG | - | chr3_4:6652100-6652119 | None:intergenic | 25.0% |
| !! | ATATCCTTGATAATTTGATC+TGG | + | chr3_4:6652123-6652142 | Msa0487610:intron | 25.0% |
| !!! | TATAAAATTTTGGAACTCCA+TGG | + | chr3_4:6652533-6652552 | Msa0487610:intron | 25.0% |
| !! | GAAGTATCTCTTAAAACTAA+AGG | + | chr3_4:6652561-6652580 | Msa0487610:intron | 25.0% |
| ! | TTATCAGTTGTTCATACTTT+AGG | - | chr3_4:6652638-6652657 | None:intergenic | 25.0% |
| ! | TAAAGTATGAACAACTGATA+AGG | + | chr3_4:6652637-6652656 | Msa0487610:intron | 25.0% |
| ! | AAAGTATGAACAACTGATAA+GGG | + | chr3_4:6652638-6652657 | Msa0487610:intron | 25.0% |
| ! | CATCCAACACAAATAAAAAA+TGG | - | chr3_4:6652745-6652764 | None:intergenic | 25.0% |
| !! | TGATATGAATTTTCCATACT+AGG | - | chr3_4:6653016-6653035 | None:intergenic | 25.0% |
| ! | TTTACTTAGTGATACAATTC+TGG | + | chr3_4:6653141-6653160 | Msa0487610:intron | 25.0% |
| ! | ATAGAATTGCAAAAGATGAA+AGG | + | chr3_4:6653556-6653575 | Msa0487610:intron | 25.0% |
| !! | AAGAAAAATACCTGATTTGT+AGG | - | chr3_4:6653697-6653716 | None:intergenic | 25.0% |
| ! | TGTTTGGTACATCAAAAAAA+GGG | - | chr3_4:6653924-6653943 | None:intergenic | 25.0% |
| ! | ATGTTTGGTACATCAAAAAA+AGG | - | chr3_4:6653925-6653944 | None:intergenic | 25.0% |
| !! | CTTCAACATTTTATGAAACA+TGG | - | chr3_4:6654115-6654134 | None:intergenic | 25.0% |
| !!! | TTTGGATGGAATTATTTTTG+AGG | + | chr3_4:6654466-6654485 | Msa0487610:CDS | 25.0% |
| !!! | TATCTTTTGACTATAACTGA+TGG | + | chr3_4:6654489-6654508 | Msa0487610:intron | 25.0% |
| ! | ACTCATGCACAAAAAATTTA+AGG | - | chr3_4:6655075-6655094 | None:intergenic | 25.0% |
| ! | TTTATTTACACAATATCTGC+AGG | + | chr3_4:6655454-6655473 | Msa0487610:intron | 25.0% |
| !!! | GCTTTTTTGACCTATTATTT+TGG | + | chr3_4:6655548-6655567 | Msa0487610:intron | 25.0% |
| ! | CAAAATAAATAATGCAGCAT+TGG | - | chr3_4:6655911-6655930 | None:intergenic | 25.0% |
| ! | CTTATGGAAAATGATACTTA+TGG | + | chr3_4:6655963-6655982 | Msa0487610:intron | 25.0% |
| !!! | TTCTTTTTTGCAGGTATTTT+TGG | + | chr3_4:6656081-6656100 | Msa0487610:intron | 25.0% |
| !! | ATGCAGGGATTATTATATTT+TGG | + | chr3_4:6656275-6656294 | Msa0487610:three_prime_UTR | 25.0% |
| ! | GGATTTCTAATGAATTATTG+TGG | + | chr3_4:6656296-6656315 | Msa0487610:three_prime_UTR | 25.0% |
| !!! | ACATAAATGTTTTATTCAGC+TGG | + | chr3_4:6656325-6656344 | Msa0487610:three_prime_UTR | 25.0% |
| ! | TATGATCTTCTTCTTGTTGT+TGG | - | chr3_4:6649933-6649952 | None:intergenic | 30.0% |
| ! | AAATACGTTGGATTTGGAAT+CGG | - | chr3_4:6650019-6650038 | None:intergenic | 30.0% |
| TAGGAAAAATACGTTGGATT+TGG | - | chr3_4:6650025-6650044 | None:intergenic | 30.0% | |
| GTGAATTAGGAAAAATACGT+TGG | - | chr3_4:6650031-6650050 | None:intergenic | 30.0% | |
| AAATAAAGGAACGGTGAATT+AGG | - | chr3_4:6650044-6650063 | None:intergenic | 30.0% | |
| GGGTAAATACTTGAATTGAT+CGG | + | chr3_4:6650231-6650250 | Msa0487610:intron | 30.0% | |
| TAATCAAATTTGACCCTTTG+GGG | + | chr3_4:6650301-6650320 | Msa0487610:intron | 30.0% | |
| TTGAGAAAAAAACGATGAAG+AGG | - | chr3_4:6650525-6650544 | None:intergenic | 30.0% | |
| !!! | GAGAAAAAATGTCACTTTTG+GGG | - | chr3_4:6650770-6650789 | None:intergenic | 30.0% |
| GAGCAAAAAAATATCACTTG+TGG | + | chr3_4:6650803-6650822 | Msa0487610:intron | 30.0% | |
| GCAAAAAAATATCACTTGTG+GGG | + | chr3_4:6650805-6650824 | Msa0487610:intron | 30.0% | |
| CATCACTGTTATCATCAAAT+TGG | + | chr3_4:6651124-6651143 | Msa0487610:intron | 30.0% | |
| !! | GACAGGTAAAAGTTATTTTC+TGG | + | chr3_4:6651572-6651591 | Msa0487610:intron | 30.0% |
| TCATCTATTGATCTTATGTG+AGG | + | chr3_4:6651635-6651654 | Msa0487610:intron | 30.0% | |
| TAACATATAATGCATGTGCT+GGG | + | chr3_4:6651946-6651965 | Msa0487610:intron | 30.0% | |
| TTGACCAGATCAAATTATCA+AGG | - | chr3_4:6652130-6652149 | None:intergenic | 30.0% | |
| ! | CAACGTAACTAATTTAGAGT+GGG | - | chr3_4:6652264-6652283 | None:intergenic | 30.0% |
| TCAACGTAACTAATTTAGAG+TGG | - | chr3_4:6652265-6652284 | None:intergenic | 30.0% | |
| ATTTCAAATTTCATAGGTGG+TGG | + | chr3_4:6652675-6652694 | Msa0487610:intron | 30.0% | |
| CAACACAAATAAAAAATGGG+TGG | - | chr3_4:6652741-6652760 | None:intergenic | 30.0% | |
| !!! | CACCCATTTTTTATTTGTGT+TGG | + | chr3_4:6652739-6652758 | Msa0487610:intron | 30.0% |
| TATTTGTGTTGGATGCTATT+AGG | + | chr3_4:6652750-6652769 | Msa0487610:intron | 30.0% | |
| TTTGATCTACTTACAGCAAA+AGG | + | chr3_4:6652849-6652868 | Msa0487610:intron | 30.0% | |
| AGATAAGTTTCAGTTACTAC+TGG | + | chr3_4:6653066-6653085 | Msa0487610:intron | 30.0% | |
| GATAAGTTTCAGTTACTACT+GGG | + | chr3_4:6653067-6653086 | Msa0487610:intron | 30.0% | |
| AAGACAAAATTACACACCAA+GGG | - | chr3_4:6653117-6653136 | None:intergenic | 30.0% | |
| AAAGACAAAATTACACACCA+AGG | - | chr3_4:6653118-6653137 | None:intergenic | 30.0% | |
| !! | GATACAATTCTGGAACTAAA+TGG | + | chr3_4:6653151-6653170 | Msa0487610:intron | 30.0% |
| !!! | TTGGTTTTTTGTCTTGTGTT+TGG | + | chr3_4:6653178-6653197 | Msa0487610:intron | 30.0% |
| ATTGCAAAAGATGAAAGGTA+TGG | + | chr3_4:6653561-6653580 | Msa0487610:intron | 30.0% | |
| ! | TTGCAAAAGATGAAAGGTAT+GGG | + | chr3_4:6653562-6653581 | Msa0487610:intron | 30.0% |
| AACATATTTGGAAACATTCC+AGG | - | chr3_4:6653667-6653686 | None:intergenic | 30.0% | |
| ! | TTTCTTTTTGTTCCCAATTC+TGG | + | chr3_4:6653711-6653730 | Msa0487610:intron | 30.0% |
| TAGGGAAATCAATGCTAAAA+GGG | - | chr3_4:6653894-6653913 | None:intergenic | 30.0% | |
| TTAGGGAAATCAATGCTAAA+AGG | - | chr3_4:6653895-6653914 | None:intergenic | 30.0% | |
| CAAAAAAAGGGACAAAGTTA+GGG | - | chr3_4:6653912-6653931 | None:intergenic | 30.0% | |
| TCAAAAAAAGGGACAAAGTT+AGG | - | chr3_4:6653913-6653932 | None:intergenic | 30.0% | |
| ! | TTTTGATGTACCAAACATGT+AGG | + | chr3_4:6653927-6653946 | Msa0487610:intron | 30.0% |
| TCAAAATGATCTTTCCATGT+TGG | + | chr3_4:6654024-6654043 | Msa0487610:intron | 30.0% | |
| GACAAATAGGCAATTTAGAA+GGG | - | chr3_4:6654083-6654102 | None:intergenic | 30.0% | |
| TGACAAATAGGCAATTTAGA+AGG | - | chr3_4:6654084-6654103 | None:intergenic | 30.0% | |
| ATGGAAACTACATGACAAAT+AGG | - | chr3_4:6654096-6654115 | None:intergenic | 30.0% | |
| ! | GATTCTTGTGATTTGAGTTT+AGG | + | chr3_4:6654179-6654198 | Msa0487610:intron | 30.0% |
| ! | TTTGAGTTTAGGAAGCAATT+AGG | + | chr3_4:6654190-6654209 | Msa0487610:intron | 30.0% |
| !!! | AGTTTTGTTTGTGCTACTTT+TGG | + | chr3_4:6654255-6654274 | Msa0487610:intron | 30.0% |
| TAGTGAAAGATAGAGAAACA+GGG | + | chr3_4:6654819-6654838 | Msa0487610:intron | 30.0% | |
| AGCTCTCAATGGAATAAAAA+TGG | + | chr3_4:6654904-6654923 | Msa0487610:intron | 30.0% | |
| GCTCTCAATGGAATAAAAAT+GGG | + | chr3_4:6654905-6654924 | Msa0487610:intron | 30.0% | |
| ATTAAAATGCTCTCTTGTTC+AGG | - | chr3_4:6654989-6655008 | None:intergenic | 30.0% | |
| !! | GTATGGTGGGATTATTATTT+TGG | + | chr3_4:6655037-6655056 | Msa0487610:intron | 30.0% |
| GGAGAATGTAAGATTACAAA+AGG | - | chr3_4:6655328-6655347 | None:intergenic | 30.0% | |
| GATGTGACAACACAAATAAT+TGG | + | chr3_4:6655826-6655845 | Msa0487610:intron | 30.0% | |
| AGGAGTTTAATTCATATGCA+CGG | - | chr3_4:6655879-6655898 | None:intergenic | 30.0% | |
| GGAATGTCAGAAATTACTTA+TGG | + | chr3_4:6655947-6655966 | Msa0487610:intron | 30.0% | |
| ATACCTGCAAAAAAGAAAAC+AGG | - | chr3_4:6656078-6656097 | None:intergenic | 30.0% | |
| CTAATTGTGTTCTTGTTACT+TGG | + | chr3_4:6656228-6656247 | Msa0487610:exon | 30.0% | |
| AAAGAGAGAGACAGAGAAAA+TGG | + | chr3_4:6649873-6649892 | Msa0487610:exon | 35.0% | |
| AAGAGAGAGACAGAGAAAAT+GGG | + | chr3_4:6649874-6649893 | Msa0487610:exon | 35.0% | |
| ACGGCAAATTAGATATGTGT+TGG | + | chr3_4:6650120-6650139 | Msa0487610:intron | 35.0% | |
| GCACCAAATGTGATATTTGA+AGG | + | chr3_4:6650864-6650883 | Msa0487610:intron | 35.0% | |
| GGTCCTTCAAATATCACATT+TGG | - | chr3_4:6650870-6650889 | None:intergenic | 35.0% | |
| TTTGAATTGCTAGATGGTTG+TGG | + | chr3_4:6650974-6650993 | Msa0487610:intron | 35.0% | |
| ! | CTTTTACGTGCAATGTGATA+TGG | + | chr3_4:6651003-6651022 | Msa0487610:intron | 35.0% |
| !!! | TTGTTTGTTTTTTGGCAGCA+TGG | + | chr3_4:6651179-6651198 | Msa0487610:intron | 35.0% |
| GAGAGAAAAGGAGAGAAAAA+GGG | + | chr3_4:6651265-6651284 | Msa0487610:CDS | 35.0% | |
| AAAGGAGAGAAAAAGGGATA+AGG | + | chr3_4:6651271-6651290 | Msa0487610:CDS | 35.0% | |
| AAGGAGAGAAAAAGGGATAA+GGG | + | chr3_4:6651272-6651291 | Msa0487610:CDS | 35.0% | |
| ATAGTGAGAAAAGCAAAGAC+AGG | + | chr3_4:6651408-6651427 | Msa0487610:CDS | 35.0% | |
| TAGTGAGAAAAGCAAAGACA+GGG | + | chr3_4:6651409-6651428 | Msa0487610:CDS | 35.0% | |
| ! | TTGTTTGTTGGTATAGACGA+AGG | + | chr3_4:6651764-6651783 | Msa0487610:intron | 35.0% |
| ! | TGTTTGTTGGTATAGACGAA+GGG | + | chr3_4:6651765-6651784 | Msa0487610:intron | 35.0% |
| CTAACATATAATGCATGTGC+TGG | + | chr3_4:6651945-6651964 | Msa0487610:intron | 35.0% | |
| TAATGTTGTGTGAATGCATG+TGG | + | chr3_4:6652042-6652061 | Msa0487610:intron | 35.0% | |
| TTGAGTCTTAACAGTGCTAT+TGG | + | chr3_4:6652373-6652392 | Msa0487610:intron | 35.0% | |
| ACACATACCAAGTTCTCAAA+AGG | - | chr3_4:6652399-6652418 | None:intergenic | 35.0% | |
| GTTCGAAGAACATTTACTGT+CGG | - | chr3_4:6652437-6652456 | None:intergenic | 35.0% | |
| CAAACATACTCAACACACAT+TGG | - | chr3_4:6652485-6652504 | None:intergenic | 35.0% | |
| CAATGTGTGTTGAGTATGTT+TGG | + | chr3_4:6652483-6652502 | Msa0487610:intron | 35.0% | |
| !!! | AAGGACTAGTGGTTTTGATA+TGG | + | chr3_4:6652868-6652887 | Msa0487610:CDS | 35.0% |
| CAAAAAAGGGGGGAAAAAAA+AGG | - | chr3_4:6652982-6653001 | None:intergenic | 35.0% | |
| !!! | TTTTTTCCCCCCTTTTTTGT+TGG | + | chr3_4:6652983-6653002 | Msa0487610:intron | 35.0% |
| ATCAACACCAACAAAAAAGG+GGG | - | chr3_4:6652993-6653012 | None:intergenic | 35.0% | |
| GATCAACACCAACAAAAAAG+GGG | - | chr3_4:6652994-6653013 | None:intergenic | 35.0% | |
| GGATCAACACCAACAAAAAA+GGG | - | chr3_4:6652995-6653014 | None:intergenic | 35.0% | |
| AGGATCAACACCAACAAAAA+AGG | - | chr3_4:6652996-6653015 | None:intergenic | 35.0% | |
| CATGGTCTTTACTGTTTACT+TGG | + | chr3_4:6653041-6653060 | Msa0487610:intron | 35.0% | |
| !! | TCTTGTCTTATGCTCTAAGA+AGG | + | chr3_4:6653223-6653242 | Msa0487610:intron | 35.0% |
| GACATAAAAGCTACAGATGT+CGG | - | chr3_4:6653293-6653312 | None:intergenic | 35.0% | |
| ! | ATCTGTAGCTTTTATGTCCA+AGG | + | chr3_4:6653295-6653314 | Msa0487610:intron | 35.0% |
| CTGGAAACTATTACCTACTT+CGG | + | chr3_4:6653362-6653381 | Msa0487610:intron | 35.0% | |
| ! | AAATACCTGATTTGTAGGCA+GGG | - | chr3_4:6653692-6653711 | None:intergenic | 35.0% |
| ! | AAAATACCTGATTTGTAGGC+AGG | - | chr3_4:6653693-6653712 | None:intergenic | 35.0% |
| TATGACACAACAGGTAAAAG+AGG | + | chr3_4:6653829-6653848 | Msa0487610:intron | 35.0% | |
| GAAATCAATGCTAAAAGGGA+AGG | - | chr3_4:6653890-6653909 | None:intergenic | 35.0% | |
| TTCTCATTCATGAACCAACA+TGG | - | chr3_4:6654041-6654060 | None:intergenic | 35.0% | |
| !! | TGTTGGTTCATGAATGAGAA+TGG | + | chr3_4:6654041-6654060 | Msa0487610:intron | 35.0% |
| !!! | AGCTTTTTAGAGTATGTTGC+TGG | + | chr3_4:6654133-6654152 | Msa0487610:intron | 35.0% |
| TAGTTAAGTGAAGAACACGT+TGG | + | chr3_4:6654216-6654235 | Msa0487610:intron | 35.0% | |
| AACTTTCTTCAGTCAGGTTA+TGG | + | chr3_4:6654322-6654341 | Msa0487610:CDS | 35.0% | |
| !! | AGAGACGGATTATAATCAGT+AGG | - | chr3_4:6654611-6654630 | None:intergenic | 35.0% |
| !! | AGAGAGCTTTTAGAGACTTT+TGG | + | chr3_4:6654776-6654795 | Msa0487610:intron | 35.0% |
| CTAGTGAAAGATAGAGAAAC+AGG | + | chr3_4:6654818-6654837 | Msa0487610:intron | 35.0% | |
| TAGAGAAACAGGGAATTCAA+AGG | + | chr3_4:6654829-6654848 | Msa0487610:intron | 35.0% | |
| AGAGAAACAGGGAATTCAAA+GGG | + | chr3_4:6654830-6654849 | Msa0487610:intron | 35.0% | |
| ACTTATGTTACAACCAGCAT+TGG | + | chr3_4:6655135-6655154 | Msa0487610:CDS | 35.0% | |
| AACTTAGGCCTGATTCTTTA+GGG | - | chr3_4:6655350-6655369 | None:intergenic | 35.0% | |
| AAACTTAGGCCTGATTCTTT+AGG | - | chr3_4:6655351-6655370 | None:intergenic | 35.0% | |
| CACAATATCTGCAGGTAATT+TGG | + | chr3_4:6655462-6655481 | Msa0487610:intron | 35.0% | |
| TGCAGGTAATTTGGTTAATG+TGG | + | chr3_4:6655471-6655490 | Msa0487610:intron | 35.0% | |
| ! | ATTCTCTACTCTTTTGTCTC+TGG | + | chr3_4:6655573-6655592 | Msa0487610:intron | 35.0% |
| GTTTGTCCTTCAGGAAATAA+TGG | + | chr3_4:6655631-6655650 | Msa0487610:intron | 35.0% | |
| ATAAATTGGCATACTCGCTT+CGG | - | chr3_4:6655788-6655807 | None:intergenic | 35.0% | |
| !! | AATAATGCAGCATTGGCAAT+AGG | - | chr3_4:6655904-6655923 | None:intergenic | 35.0% |
| !! | GAACCTGTTTTCTTTTTTGC+AGG | + | chr3_4:6656072-6656091 | Msa0487610:intron | 35.0% |
| GGACTGAATGGAAGAAAATT+TGG | + | chr3_4:6656142-6656161 | Msa0487610:CDS | 35.0% | |
| CTGAATGGAAGAAAATTTGG+TGG | + | chr3_4:6656145-6656164 | Msa0487610:CDS | 35.0% | |
| ATTAGAACAAATCCTCCATC+AGG | - | chr3_4:6656358-6656377 | None:intergenic | 35.0% | |
| AGATCTTCTTCATCAACAGG+TGG | - | chr3_4:6649994-6650013 | None:intergenic | 40.0% | |
| GTGAGATCTTCTTCATCAAC+AGG | - | chr3_4:6649997-6650016 | None:intergenic | 40.0% | |
| GAATTGATCGGTGAAATCGT+AGG | + | chr3_4:6650243-6650262 | Msa0487610:intron | 40.0% | |
| GTCCAAACAAAAACCCCAAA+GGG | - | chr3_4:6650317-6650336 | None:intergenic | 40.0% | |
| GGACGAGAATTGCATTAAGT+TGG | + | chr3_4:6650333-6650352 | Msa0487610:intron | 40.0% | |
| ! | CTGGTAATTGGGTACTGTAT+TGG | + | chr3_4:6650465-6650484 | Msa0487610:intron | 40.0% |
| AACGATGAAGAGGATTCATC+AGG | - | chr3_4:6650515-6650534 | None:intergenic | 40.0% | |
| ! | TTCACATTTGAGACAACGCT+GGG | - | chr3_4:6650741-6650760 | None:intergenic | 40.0% |
| ! | ATTCACATTTGAGACAACGC+TGG | - | chr3_4:6650742-6650761 | None:intergenic | 40.0% |
| ATCCTCCAGAAGTAGAGAAA+AGG | + | chr3_4:6651229-6651248 | Msa0487610:CDS | 40.0% | |
| GGAGAGAAAAGGAGAGAAAA+AGG | + | chr3_4:6651264-6651283 | Msa0487610:CDS | 40.0% | |
| ATCGTAGTGAGAGAAAGGAA+AGG | + | chr3_4:6651504-6651523 | Msa0487610:CDS | 40.0% | |
| TCGTAGTGAGAGAAAGGAAA+GGG | + | chr3_4:6651505-6651524 | Msa0487610:CDS | 40.0% | |
| TGAGAGAAAGGAAAGGGTAA+GGG | + | chr3_4:6651511-6651530 | Msa0487610:CDS | 40.0% | |
| ! | ACTTTTACCTGTCATAGCCT+CGG | - | chr3_4:6651565-6651584 | None:intergenic | 40.0% |
| TCGATCTAGATCAAGGTCAA+GGG | + | chr3_4:6651828-6651847 | Msa0487610:CDS | 40.0% | |
| !!! | TCTTTCTGGGACTTACCTTT+TGG | - | chr3_4:6651896-6651915 | None:intergenic | 40.0% |
| ATAGTTAAAGGATATGCGCG+AGG | + | chr3_4:6652010-6652029 | Msa0487610:intron | 40.0% | |
| TAGTTAAAGGATATGCGCGA+GGG | + | chr3_4:6652011-6652030 | Msa0487610:intron | 40.0% | |
| TTGTGTGAATGCATGTGGAA+GGG | + | chr3_4:6652047-6652066 | Msa0487610:intron | 40.0% | |
| !!! | CTATTGGCCTTTTGAGAACT+TGG | + | chr3_4:6652389-6652408 | Msa0487610:intron | 40.0% |
| !!! | ATTTTGGAACTCCATGGACT+TGG | + | chr3_4:6652539-6652558 | Msa0487610:intron | 40.0% |
| AAGAGATACTTCCAAGTCCA+TGG | - | chr3_4:6652553-6652572 | None:intergenic | 40.0% | |
| !! | CAAATTTCATAGGTGGTGGA+AGG | + | chr3_4:6652679-6652698 | Msa0487610:intron | 40.0% |
| ACTTACAGCAAAAGGACTAG+TGG | + | chr3_4:6652857-6652876 | Msa0487610:intron | 40.0% | |
| TCAACACCAACAAAAAAGGG+GGG | - | chr3_4:6652992-6653011 | None:intergenic | 40.0% | |
| !! | TGTTGGTGTTGATCCTAGTA+TGG | + | chr3_4:6653000-6653019 | Msa0487610:intron | 40.0% |
| GGTACATAGCTCTTGAATAC+TGG | + | chr3_4:6653088-6653107 | Msa0487610:intron | 40.0% | |
| !! | TCTTGAATACTGGTTTCCCT+TGG | + | chr3_4:6653098-6653117 | Msa0487610:intron | 40.0% |
| ! | TCTGGAACTAAATGGTGCTT+TGG | + | chr3_4:6653159-6653178 | Msa0487610:intron | 40.0% |
| !! | ATGCTCTAAGAAGGCAATGT+TGG | + | chr3_4:6653232-6653251 | Msa0487610:intron | 40.0% |
| !! | TGCTCTAAGAAGGCAATGTT+GGG | + | chr3_4:6653233-6653252 | Msa0487610:intron | 40.0% |
| ! | TGTAGCTTTTATGTCCAAGG+AGG | + | chr3_4:6653298-6653317 | Msa0487610:intron | 40.0% |
| ! | GGAATCAATGCACCTGTTTT+TGG | + | chr3_4:6653319-6653338 | Msa0487610:intron | 40.0% |
| !!! | ATCAATGCACCTGTTTTTGG+TGG | + | chr3_4:6653322-6653341 | Msa0487610:intron | 40.0% |
| !!! | TCAATGCACCTGTTTTTGGT+GGG | + | chr3_4:6653323-6653342 | Msa0487610:intron | 40.0% |
| ATTCGTAAGTCTACCGAAGT+AGG | - | chr3_4:6653378-6653397 | None:intergenic | 40.0% | |
| ! | AATACCTGATTTGTAGGCAG+GGG | - | chr3_4:6653691-6653710 | None:intergenic | 40.0% |
| ATTACCTGCTCATTAGCTGT+AGG | - | chr3_4:6653994-6654013 | None:intergenic | 40.0% | |
| AGTTGCAACTTTCTTCAGTC+AGG | + | chr3_4:6654316-6654335 | Msa0487610:CDS | 40.0% | |
| AGTCAGGTTATGGCTACAAT+TGG | + | chr3_4:6654332-6654351 | Msa0487610:CDS | 40.0% | |
| CAAAGGCAAACTTCTTGTCA+TGG | - | chr3_4:6654406-6654425 | None:intergenic | 40.0% | |
| TGACAAGAAGTTTGCCTTTG+TGG | + | chr3_4:6654406-6654425 | Msa0487610:CDS | 40.0% | |
| AGTTTGCCTTTGTGGAAATG+AGG | + | chr3_4:6654414-6654433 | Msa0487610:CDS | 40.0% | |
| ! | GATTAAGGTTTGGGTTAGGT+TGG | - | chr3_4:6654655-6654674 | None:intergenic | 40.0% |
| ACCTAACCCAAACCTTAATC+TGG | + | chr3_4:6654655-6654674 | Msa0487610:CDS | 40.0% | |
| CCTAACCCAAACCTTAATCT+GGG | + | chr3_4:6654656-6654675 | Msa0487610:CDS | 40.0% | |
| CTAAGCCCAGATTAAGGTTT+GGG | - | chr3_4:6654664-6654683 | None:intergenic | 40.0% | |
| ACTAAGCCCAGATTAAGGTT+TGG | - | chr3_4:6654665-6654684 | None:intergenic | 40.0% | |
| AACCTTAATCTGGGCTTAGT+TGG | + | chr3_4:6654665-6654684 | Msa0487610:CDS | 40.0% | |
| ! | TAGAGACTTTTGGTCCTCTT+CGG | + | chr3_4:6654786-6654805 | Msa0487610:intron | 40.0% |
| ! | ATGCTCTCTTGTTCAGGTTT+AGG | - | chr3_4:6654983-6655002 | None:intergenic | 40.0% |
| ! | TATGTTACAACCAGCATTGG+TGG | + | chr3_4:6655138-6655157 | Msa0487610:CDS | 40.0% |
| TCATCATCTTTGAGCTCATC+AGG | - | chr3_4:6655199-6655218 | None:intergenic | 40.0% | |
| TGATGAGCTCAAAGATGATG+AGG | + | chr3_4:6655198-6655217 | Msa0487610:CDS | 40.0% | |
| ! | GATTCTTGATGATATGCGAC+AGG | + | chr3_4:6655231-6655250 | Msa0487610:CDS | 40.0% |
| ACATTCTCCCCTAAAGAATC+AGG | + | chr3_4:6655339-6655358 | Msa0487610:intron | 40.0% | |
| ACTTAGGCCTGATTCTTTAG+GGG | - | chr3_4:6655349-6655368 | None:intergenic | 40.0% | |
| !! | AGGCTTTGAGTCTGAAACTT+AGG | - | chr3_4:6655365-6655384 | None:intergenic | 40.0% |
| TTTGTCTGTGTTTGTCCTTC+AGG | + | chr3_4:6655622-6655641 | Msa0487610:intron | 40.0% | |
| ATCACGCCATTATTTCCTGA+AGG | - | chr3_4:6655640-6655659 | None:intergenic | 40.0% | |
| TTGGAGTATGCTGATGTTGA+TGG | + | chr3_4:6656100-6656119 | Msa0487610:CDS | 40.0% | |
| TTCTTCCATTCAGTCCAGAA+CGG | - | chr3_4:6656138-6656157 | None:intergenic | 40.0% | |
| ! | TCCAGAGAACAAATTTGCTC+AGG | + | chr3_4:6656192-6656211 | Msa0487610:CDS | 40.0% |
| ! | CCAGAGAACAAATTTGCTCA+GGG | + | chr3_4:6656193-6656212 | Msa0487610:CDS | 40.0% |
| TCTTCTTCATCAACAGGTGG+TGG | - | chr3_4:6649991-6650010 | None:intergenic | 45.0% | |
| !!! | GACCCTTTGGGGTTTTTGTT+TGG | + | chr3_4:6650312-6650331 | Msa0487610:intron | 45.0% |
| CGTCCAAACAAAAACCCCAA+AGG | - | chr3_4:6650318-6650337 | None:intergenic | 45.0% | |
| GCCAAAATTCACCACCATCT+GGG | + | chr3_4:6650827-6650846 | Msa0487610:intron | 45.0% | |
| !! | ACCCAGATGGTGGTGAATTT+TGG | - | chr3_4:6650831-6650850 | None:intergenic | 45.0% |
| AAATTCACCACCATCTGGGT+TGG | + | chr3_4:6650831-6650850 | Msa0487610:intron | 45.0% | |
| AATTCACCACCATCTGGGTT+GGG | + | chr3_4:6650832-6650851 | Msa0487610:intron | 45.0% | |
| AACTTTGATCCCAACCCAGA+TGG | - | chr3_4:6650844-6650863 | None:intergenic | 45.0% | |
| ! | CTCCTTTTCTCTACTTCTGG+AGG | - | chr3_4:6651234-6651253 | None:intergenic | 45.0% |
| CCAGAAGTAGAGAAAAGGAG+CGG | + | chr3_4:6651234-6651253 | Msa0487610:CDS | 45.0% | |
| CAGAAGTAGAGAAAAGGAGC+GGG | + | chr3_4:6651235-6651254 | Msa0487610:CDS | 45.0% | |
| AAAGGGATAAGGGAAGAGAC+AGG | + | chr3_4:6651282-6651301 | Msa0487610:CDS | 45.0% | |
| AAGGGATAAGGGAAGAGACA+GGG | + | chr3_4:6651283-6651302 | Msa0487610:CDS | 45.0% | |
| AAGAGACAGGGATAGAAGCA+GGG | + | chr3_4:6651295-6651314 | Msa0487610:CDS | 45.0% | |
| ATAGAAGCAGGGATAGGGAT+AGG | + | chr3_4:6651306-6651325 | Msa0487610:CDS | 45.0% | |
| TAGAAGCAGGGATAGGGATA+GGG | + | chr3_4:6651307-6651326 | Msa0487610:CDS | 45.0% | |
| ATAGGGATAGGGAGAAAAGC+AGG | + | chr3_4:6651318-6651337 | Msa0487610:CDS | 45.0% | |
| TAGGGATAGGGAGAAAAGCA+GGG | + | chr3_4:6651319-6651338 | Msa0487610:CDS | 45.0% | |
| GTGAGAGAAAGGAAAGGGTA+AGG | + | chr3_4:6651510-6651529 | Msa0487610:CDS | 45.0% | |
| GATGATTATCACAGAAGCCG+AGG | + | chr3_4:6651545-6651564 | Msa0487610:CDS | 45.0% | |
| ATGATCGAGAGGATAGGCAT+AGG | + | chr3_4:6651791-6651810 | Msa0487610:CDS | 45.0% | |
| ACCTTGATCTAGATCGAGAC+CGG | - | chr3_4:6651825-6651844 | None:intergenic | 45.0% | |
| CTCGATCTAGATCAAGGTCA+AGG | + | chr3_4:6651827-6651846 | Msa0487610:CDS | 45.0% | |
| CTCGATCTGAGCATAGATCA+AGG | + | chr3_4:6651851-6651870 | Msa0487610:CDS | 45.0% | |
| AGTTAAAGGATATGCGCGAG+GGG | + | chr3_4:6652012-6652031 | Msa0487610:intron | 45.0% | |
| GTTGTGTGAATGCATGTGGA+AGG | + | chr3_4:6652046-6652065 | Msa0487610:intron | 45.0% | |
| GTTACAATCACTGAGCAGCA+AGG | - | chr3_4:6652708-6652727 | None:intergenic | 45.0% | |
| !!! | GAACGTTGCTTTTCATGCAG+AGG | - | chr3_4:6652813-6652832 | None:intergenic | 45.0% |
| ACCCAATATCGCAGAAGTAG+GGG | - | chr3_4:6652897-6652916 | None:intergenic | 45.0% | |
| CACCCAATATCGCAGAAGTA+GGG | - | chr3_4:6652898-6652917 | None:intergenic | 45.0% | |
| GAACAAGACCCACCAAAAAC+AGG | - | chr3_4:6653334-6653353 | None:intergenic | 45.0% | |
| !! | GGGTCTTGTTCATCTTCAAC+TGG | + | chr3_4:6653343-6653362 | Msa0487610:intron | 45.0% |
| ! | CAACTGACTTCTGCTACAAC+TGG | - | chr3_4:6653521-6653540 | None:intergenic | 45.0% |
| ! | ATATGCCTTGCTGTACTTGC+AGG | + | chr3_4:6653613-6653632 | Msa0487610:intron | 45.0% |
| TACTTGCAGGTCAGATCTCT+GGG | + | chr3_4:6653626-6653645 | Msa0487610:intron | 45.0% | |
| GGAAACATTCCAGGAATAGC+AGG | - | chr3_4:6653658-6653677 | None:intergenic | 45.0% | |
| GTAGGCAGGGGAAACATATT+TGG | - | chr3_4:6653679-6653698 | None:intergenic | 45.0% | |
| TGTCCAGCAGAACCAGAATT+GGG | - | chr3_4:6653726-6653745 | None:intergenic | 45.0% | |
| TTGTCCAGCAGAACCAGAAT+TGG | - | chr3_4:6653727-6653746 | None:intergenic | 45.0% | |
| !! | AAGACAGGGAGAGCACTAAA+CGG | - | chr3_4:6653797-6653816 | None:intergenic | 45.0% |
| AGTTCAGGCTATGACACAAC+AGG | + | chr3_4:6653820-6653839 | Msa0487610:CDS | 45.0% | |
| TGTCGTGTAGCCTACATGTT+TGG | - | chr3_4:6653940-6653959 | None:intergenic | 45.0% | |
| CAGGTTATGGCTACAATTGG+AGG | + | chr3_4:6654335-6654354 | Msa0487610:CDS | 45.0% | |
| ACATTCACAACTGCATCACC+TGG | - | chr3_4:6654374-6654393 | None:intergenic | 45.0% | |
| AACGGACCTCATTTCCACAA+AGG | - | chr3_4:6654423-6654442 | None:intergenic | 45.0% | |
| !! | TGCATTGCTGGCTTCTTCAA+CGG | - | chr3_4:6654441-6654460 | None:intergenic | 45.0% |
| TGAAGAAGCCAGCAATGCAA+TGG | + | chr3_4:6654442-6654461 | Msa0487610:CDS | 45.0% | |
| ATCCAAAGCCATTGCATTGC+TGG | - | chr3_4:6654453-6654472 | None:intergenic | 45.0% | |
| !! | AGCAATGCAATGGCTTTGGA+TGG | + | chr3_4:6654452-6654471 | Msa0487610:CDS | 45.0% |
| ! | CCCAGATTAAGGTTTGGGTT+AGG | - | chr3_4:6654659-6654678 | None:intergenic | 45.0% |
| GTCCAACTAAGCCCAGATTA+AGG | - | chr3_4:6654670-6654689 | None:intergenic | 45.0% | |
| ! | GGTCCTGATCGGATTTTTGT+TGG | + | chr3_4:6654719-6654738 | Msa0487610:CDS | 45.0% |
| CCACCAACAAAAATCCGATC+AGG | - | chr3_4:6654725-6654744 | None:intergenic | 45.0% | |
| ! | CCTGATCGGATTTTTGTTGG+TGG | + | chr3_4:6654722-6654741 | Msa0487610:intron | 45.0% |
| ! | AGAGACTTTTGGTCCTCTTC+GGG | + | chr3_4:6654787-6654806 | Msa0487610:intron | 45.0% |
| ACTAGATCAAAACCCCGAAG+AGG | - | chr3_4:6654803-6654822 | None:intergenic | 45.0% | |
| TATTCCATTGAGAGCTGCAC+AGG | - | chr3_4:6654900-6654919 | None:intergenic | 45.0% | |
| ! | GTTCAGGTTTAGGCTGCATT+GGG | - | chr3_4:6654973-6654992 | None:intergenic | 45.0% |
| ! | TGTTCAGGTTTAGGCTGCAT+TGG | - | chr3_4:6654974-6654993 | None:intergenic | 45.0% |
| CGACAGGAATGCTCCAAATT+TGG | + | chr3_4:6655247-6655266 | Msa0487610:CDS | 45.0% | |
| AGCAAACCTTTCCAACTCCA+GGG | - | chr3_4:6655531-6655550 | None:intergenic | 45.0% | |
| AAGCAAACCTTTCCAACTCC+AGG | - | chr3_4:6655532-6655551 | None:intergenic | 45.0% | |
| !! | TGCAGCATTGGCAATAGGAA+AGG | - | chr3_4:6655899-6655918 | None:intergenic | 45.0% |
| TCTTCCATTCAGTCCAGAAC+GGG | - | chr3_4:6656137-6656156 | None:intergenic | 45.0% | |
| ! | CCCTGAGCAAATTTGTTCTC+TGG | - | chr3_4:6656196-6656215 | None:intergenic | 45.0% |
| TTTGCTCAGGGCGATTATGA+AGG | + | chr3_4:6656205-6656224 | Msa0487610:CDS | 45.0% | |
| !!! | ATTAAAATTTTGAAATTTTA+GGG | - | chr3_4:6650285-6650304 | None:intergenic | 5.0% |
| !!! | CTTAAAATTTTAAAATTATT+AGG | - | chr3_4:6652222-6652241 | None:intergenic | 5.0% |
| ! | TCTTCATCAACAGGTGGTGG+TGG | - | chr3_4:6649988-6650007 | None:intergenic | 50.0% |
| GGCCAAAATTCACCACCATC+TGG | + | chr3_4:6650826-6650845 | Msa0487610:intron | 50.0% | |
| TTTGATCCCAACCCAGATGG+TGG | - | chr3_4:6650841-6650860 | None:intergenic | 50.0% | |
| ! | CCGCTCCTTTTCTCTACTTC+TGG | - | chr3_4:6651237-6651256 | None:intergenic | 50.0% |
| AGAGAAAAGGAGCGGGAGAA+TGG | + | chr3_4:6651242-6651261 | Msa0487610:CDS | 50.0% | |
| GAGAAAAGGAGCGGGAGAAT+GGG | + | chr3_4:6651243-6651262 | Msa0487610:CDS | 50.0% | |
| GAAGAGACAGGGATAGAAGC+AGG | + | chr3_4:6651294-6651313 | Msa0487610:CDS | 50.0% | |
| ACAGGGATAGAAGCAGGGAT+AGG | + | chr3_4:6651300-6651319 | Msa0487610:CDS | 50.0% | |
| CAGGGATAGAAGCAGGGATA+GGG | + | chr3_4:6651301-6651320 | Msa0487610:CDS | 50.0% | |
| ACAGAGAGAGTGAGAGAAGC+AGG | + | chr3_4:6651342-6651361 | Msa0487610:CDS | 50.0% | |
| CAGAGAGAGTGAGAGAAGCA+GGG | + | chr3_4:6651343-6651362 | Msa0487610:CDS | 50.0% | |
| TCAGAGATAGGGAGAGAAGC+AGG | + | chr3_4:6651372-6651391 | Msa0487610:CDS | 50.0% | |
| CAGAGATAGGGAGAGAAGCA+GGG | + | chr3_4:6651373-6651392 | Msa0487610:CDS | 50.0% | |
| CTCTATGATGGTCACGGTCA+CGG | - | chr3_4:6651472-6651491 | None:intergenic | 50.0% | |
| GGCGATCTCTATGATGGTCA+CGG | - | chr3_4:6651478-6651497 | None:intergenic | 50.0% | |
| ACCATCATAGAGATCGCCAC+AGG | + | chr3_4:6651480-6651499 | Msa0487610:CDS | 50.0% | |
| CCATCATAGAGATCGCCACA+GGG | + | chr3_4:6651481-6651500 | Msa0487610:CDS | 50.0% | |
| TTCTCTCACTACGATCCCTG+TGG | - | chr3_4:6651499-6651518 | None:intergenic | 50.0% | |
| CAGGGATCGTAGTGAGAGAA+AGG | + | chr3_4:6651499-6651518 | Msa0487610:CDS | 50.0% | |
| ! | ACGAAGGGAGTATGATCGAG+AGG | + | chr3_4:6651780-6651799 | Msa0487610:CDS | 50.0% |
| ! | GGGAGTATGATCGAGAGGAT+AGG | + | chr3_4:6651785-6651804 | Msa0487610:CDS | 50.0% |
| GAGAGGATAGGCATAGGAGT+AGG | + | chr3_4:6651797-6651816 | Msa0487610:CDS | 50.0% | |
| GTTCTCGTTCACGCTCCAAA+AGG | + | chr3_4:6651878-6651897 | Msa0487610:CDS | 50.0% | |
| !! | CGACTGGAACAACTTGTTGC+AGG | - | chr3_4:6652459-6652478 | None:intergenic | 50.0% |
| CAACACACATTGGACTCGAC+TGG | - | chr3_4:6652475-6652494 | None:intergenic | 50.0% | |
| TCCCCCTACTTCTGCGATAT+TGG | + | chr3_4:6652892-6652911 | Msa0487610:CDS | 50.0% | |
| CCCAATATCGCAGAAGTAGG+GGG | - | chr3_4:6652896-6652915 | None:intergenic | 50.0% | |
| CCCCCTACTTCTGCGATATT+GGG | + | chr3_4:6652893-6652912 | Msa0487610:CDS | 50.0% | |
| GCACCCAATATCGCAGAAGT+AGG | - | chr3_4:6652899-6652918 | None:intergenic | 50.0% | |
| ! | TCTGCGATATTGGGTGCTAC+TGG | + | chr3_4:6652902-6652921 | Msa0487610:CDS | 50.0% |
| !! | CAGGTGCATTGATTCCTCCT+TGG | - | chr3_4:6653315-6653334 | None:intergenic | 50.0% |
| TCTGACCTGCAAGTACAGCA+AGG | - | chr3_4:6653621-6653640 | None:intergenic | 50.0% | |
| GTACTTGCAGGTCAGATCTC+TGG | + | chr3_4:6653625-6653644 | Msa0487610:intron | 50.0% | |
| ACTTGCAGGTCAGATCTCTG+GGG | + | chr3_4:6653627-6653646 | Msa0487610:intron | 50.0% | |
| GTTTCCCCTGCCTACAAATC+AGG | + | chr3_4:6653684-6653703 | Msa0487610:CDS | 50.0% | |
| !! | GTTCCCAATTCTGGTTCTGC+TGG | + | chr3_4:6653720-6653739 | Msa0487610:intron | 50.0% |
| AGGCTACACGACATGCTAGA+CGG | + | chr3_4:6653947-6653966 | Msa0487610:intron | 50.0% | |
| CATGCTAGACGGGTGTATGT+TGG | + | chr3_4:6653958-6653977 | Msa0487610:CDS | 50.0% | |
| GCTCATTAGCTGTAGGAGAG+AGG | - | chr3_4:6653987-6654006 | None:intergenic | 50.0% | |
| CTCTCCTACAGCTAATGAGC+AGG | + | chr3_4:6653987-6654006 | Msa0487610:CDS | 50.0% | |
| ACAATTGGAGGAAACACCGC+TGG | + | chr3_4:6654347-6654366 | Msa0487610:CDS | 50.0% | |
| AGCCAGCAATGCAATGGCTT+TGG | + | chr3_4:6654448-6654467 | Msa0487610:CDS | 50.0% | |
| AATTCAGGGTGCACCAGTGA+AGG | + | chr3_4:6654577-6654596 | Msa0487610:intron | 50.0% | |
| !! | AGGTTTGGGTTAGGTTGGCT+TGG | - | chr3_4:6654650-6654669 | None:intergenic | 50.0% |
| GGCTTAGTTGGACTATCACC+TGG | + | chr3_4:6654677-6654696 | Msa0487610:CDS | 50.0% | |
| ! | GAGACTTTTGGTCCTCTTCG+GGG | + | chr3_4:6654788-6654807 | Msa0487610:intron | 50.0% |
| ATTGCCTGTGCAGCTCTCAA+TGG | + | chr3_4:6654893-6654912 | Msa0487610:intron | 50.0% | |
| AGCAGATTGCTCTGCAGGTA+TGG | + | chr3_4:6655020-6655039 | Msa0487610:intron | 50.0% | |
| AGATTGCTCTGCAGGTATGG+TGG | + | chr3_4:6655023-6655042 | Msa0487610:intron | 50.0% | |
| GATTGCTCTGCAGGTATGGT+GGG | + | chr3_4:6655024-6655043 | Msa0487610:intron | 50.0% | |
| !! | ACCAGCATTGGTGGCAACAA+AGG | + | chr3_4:6655147-6655166 | Msa0487610:CDS | 50.0% |
| ACCTTTGTTGCCACCAATGC+TGG | - | chr3_4:6655151-6655170 | None:intergenic | 50.0% | |
| ! | ATTCAGTCCAGAACGGGCTT+TGG | - | chr3_4:6656131-6656150 | None:intergenic | 50.0% |
| ! | AAAGCCCGTTCTGGACTGAA+TGG | + | chr3_4:6656130-6656149 | Msa0487610:CDS | 50.0% |
| TCAGCTGGAATAGCACCTGA+TGG | + | chr3_4:6656340-6656359 | Msa0487610:three_prime_UTR | 50.0% | |
| !! | TCATCAACAGGTGGTGGTGG+TGG | - | chr3_4:6649985-6650004 | None:intergenic | 55.0% |
| GCGGGAGAATGGGAGAGAAA+AGG | + | chr3_4:6651253-6651272 | Msa0487610:CDS | 55.0% | |
| AGAGTGAGAGAAGCAGGGAC+AGG | + | chr3_4:6651348-6651367 | Msa0487610:CDS | 55.0% | |
| GAGTGAGAGAAGCAGGGACA+GGG | + | chr3_4:6651349-6651368 | Msa0487610:CDS | 55.0% | |
| CAGGGACAGGGTCAGAGATA+GGG | + | chr3_4:6651361-6651380 | Msa0487610:CDS | 55.0% | |
| ATAGGGAGAGAAGCAGGGAC+AGG | + | chr3_4:6651378-6651397 | Msa0487610:CDS | 55.0% | |
| TAGGGAGAGAAGCAGGGACA+GGG | + | chr3_4:6651379-6651398 | Msa0487610:CDS | 55.0% | |
| GCAAAGACAGGGAACGCGAT+CGG | + | chr3_4:6651420-6651439 | Msa0487610:CDS | 55.0% | |
| CAAAGACAGGGAACGCGATC+GGG | + | chr3_4:6651421-6651440 | Msa0487610:CDS | 55.0% | |
| ATCGGGATGGGGAGAAGGAA+AGG | + | chr3_4:6651438-6651457 | Msa0487610:CDS | 55.0% | |
| TCGGGATGGGGAGAAGGAAA+GGG | + | chr3_4:6651439-6651458 | Msa0487610:CDS | 55.0% | |
| ATGGGGAGAAGGAAAGGGAG+AGG | + | chr3_4:6651444-6651463 | Msa0487610:CDS | 55.0% | |
| TGGGGAGAAGGAAAGGGAGA+GGG | + | chr3_4:6651445-6651464 | Msa0487610:CDS | 55.0% | |
| CCCTGTGGCGATCTCTATGA+TGG | - | chr3_4:6651484-6651503 | None:intergenic | 55.0% | |
| ACAGAAGCCGAGGCTATGAC+AGG | + | chr3_4:6651555-6651574 | Msa0487610:CDS | 55.0% | |
| ATAGGCATAGGAGTAGGCGC+CGG | + | chr3_4:6651803-6651822 | Msa0487610:CDS | 55.0% | |
| GCCGGTCTCGATCTAGATCA+AGG | + | chr3_4:6651821-6651840 | Msa0487610:CDS | 55.0% | |
| !! | TTGGGTGCTACTGGTGTTGC+AGG | + | chr3_4:6652911-6652930 | Msa0487610:CDS | 55.0% |
| ! | TAGCCCCACTGTGCTGACAA+TGG | + | chr3_4:6653260-6653279 | Msa0487610:intron | 55.0% |
| ! | AGCCCCACTGTGCTGACAAT+GGG | + | chr3_4:6653261-6653280 | Msa0487610:intron | 55.0% |
| ACGCCCATTGTCAGCACAGT+GGG | - | chr3_4:6653267-6653286 | None:intergenic | 55.0% | |
| GGCTACACGACATGCTAGAC+GGG | + | chr3_4:6653948-6653967 | Msa0487610:intron | 55.0% | |
| GCTAGACGGGTGTATGTTGG+TGG | + | chr3_4:6653961-6653980 | Msa0487610:CDS | 55.0% | |
| AACTGCATCACCTGGACCAG+CGG | - | chr3_4:6654366-6654385 | None:intergenic | 55.0% | |
| GTAGGTCTCCTGACCTTCAC+TGG | - | chr3_4:6654593-6654612 | None:intergenic | 55.0% | |
| !! | GTTAGGTTGGCTTGGCCCTA+GGG | - | chr3_4:6654642-6654661 | None:intergenic | 55.0% |
| !! | GACTATCACCTGGCTCTGCT+GGG | + | chr3_4:6654687-6654706 | Msa0487610:CDS | 55.0% |
| !! | ACTATCACCTGGCTCTGCTG+GGG | + | chr3_4:6654688-6654707 | Msa0487610:CDS | 55.0% |
| ! | GGGGACTTGATGGTCCTGAT+CGG | + | chr3_4:6654708-6654727 | Msa0487610:CDS | 55.0% |
| ACAGCAGCAGATTGCTCTGC+AGG | + | chr3_4:6655015-6655034 | Msa0487610:CDS | 55.0% | |
| ACAGTTCACCATCAGGCCGT+GGG | - | chr3_4:6655507-6655526 | None:intergenic | 55.0% | |
| ACTGTGCCCTGGAGTTGGAA+AGG | + | chr3_4:6655522-6655541 | Msa0487610:CDS | 55.0% | |
| GGTTCTACCAAAGCCCGTTC+TGG | + | chr3_4:6656121-6656140 | Msa0487610:CDS | 55.0% | |
| GCTGGAATAGCACCTGATGG+AGG | + | chr3_4:6656343-6656362 | Msa0487610:three_prime_UTR | 55.0% | |
| !! | TCAACAGGTGGTGGTGGTGG+TGG | - | chr3_4:6649982-6650001 | None:intergenic | 60.0% |
| GCAGGGACAGGGTCAGAGAT+AGG | + | chr3_4:6651360-6651379 | Msa0487610:CDS | 60.0% | |
| AGGGAGAGAAGCAGGGACAG+GGG | + | chr3_4:6651380-6651399 | Msa0487610:CDS | 60.0% | |
| ACAGGGAACGCGATCGGGAT+GGG | + | chr3_4:6651426-6651445 | Msa0487610:CDS | 60.0% | |
| AAGGATATGCGCGAGGGGAC+TGG | + | chr3_4:6652017-6652036 | Msa0487610:intron | 60.0% | |
| CGCCCATTGTCAGCACAGTG+GGG | - | chr3_4:6653266-6653285 | None:intergenic | 60.0% | |
| CACGCCCATTGTCAGCACAG+TGG | - | chr3_4:6653268-6653287 | None:intergenic | 60.0% | |
| GGGGCAAGTCCTGCTATTCC+TGG | + | chr3_4:6653646-6653665 | Msa0487610:CDS | 60.0% | |
| AGGGTGCACCAGTGAAGGTC+AGG | + | chr3_4:6654582-6654601 | Msa0487610:intron | 60.0% | |
| CCTAGGGCAGCAGCTAGAGA+CGG | - | chr3_4:6654626-6654645 | None:intergenic | 60.0% | |
| CGTCTCTAGCTGCTGCCCTA+GGG | + | chr3_4:6654624-6654643 | Msa0487610:CDS | 60.0% | |
| !! | GGTTAGGTTGGCTTGGCCCT+AGG | - | chr3_4:6654643-6654662 | None:intergenic | 60.0% |
| !! | GGACTATCACCTGGCTCTGC+TGG | + | chr3_4:6654686-6654705 | Msa0487610:CDS | 60.0% |
| !! | CTATCACCTGGCTCTGCTGG+GGG | + | chr3_4:6654689-6654708 | Msa0487610:CDS | 60.0% |
| ATGTGGTGATCCCTCGCCCA+CGG | + | chr3_4:6655488-6655507 | Msa0487610:CDS | 60.0% | |
| CACAGTTCACCATCAGGCCG+TGG | - | chr3_4:6655508-6655527 | None:intergenic | 60.0% | |
| CCAGGGCACAGTTCACCATC+AGG | - | chr3_4:6655514-6655533 | None:intergenic | 60.0% | |
| ! | CCTGATGGTGAACTGTGCCC+TGG | + | chr3_4:6655511-6655530 | Msa0487610:CDS | 60.0% |
| GGTGAACTGTGCCCTGGAGT+TGG | + | chr3_4:6655517-6655536 | Msa0487610:CDS | 60.0% | |
| !! | GGTGGTGGTGGTGGTGGTTG+TGG | - | chr3_4:6649973-6649992 | None:intergenic | 65.0% |
| !! | ACAGGTGGTGGTGGTGGTGG+TGG | - | chr3_4:6649979-6649998 | None:intergenic | 65.0% |
| GACAGGGAACGCGATCGGGA+TGG | + | chr3_4:6651425-6651444 | Msa0487610:CDS | 65.0% | |
| CAGGGAACGCGATCGGGATG+GGG | + | chr3_4:6651427-6651446 | Msa0487610:CDS | 65.0% | |
| ACGCGATCGGGATGGGGAGA+AGG | + | chr3_4:6651433-6651452 | Msa0487610:CDS | 65.0% | |
| GGAGGAAACACCGCTGGTCC+AGG | + | chr3_4:6654353-6654372 | Msa0487610:CDS | 65.0% | |
| CCGTCTCTAGCTGCTGCCCT+AGG | + | chr3_4:6654623-6654642 | Msa0487610:CDS | 65.0% | |
| TCAAGTCCCCCAGCAGAGCC+AGG | - | chr3_4:6654698-6654717 | None:intergenic | 65.0% | |
| GGCTCTGCTGGGGGACTTGA+TGG | + | chr3_4:6654698-6654717 | Msa0487610:CDS | 65.0% | |
| ATCCCTCGCCCACGGCCTGA+TGG | + | chr3_4:6655496-6655515 | Msa0487610:CDS | 70.0% | |
| CACCATCAGGCCGTGGGCGA+GGG | - | chr3_4:6655501-6655520 | None:intergenic | 70.0% | |
| TCACCATCAGGCCGTGGGCG+AGG | - | chr3_4:6655502-6655521 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 6649820 | 6656434 | 6649820 | ID=Msa0487610;Name=Msa0487610 |
| chr3_4 | mRNA | 6649820 | 6656434 | 6649820 | ID=Msa0487610-mRNA-1;Parent=Msa0487610;Name=Msa0487610-mRNA-1;_AED=0.24;_eAED=0.24;_QI=72|0.91|0.84|1|1|1|13|203|552 |
| chr3_4 | exon | 6649820 | 6650032 | 6649820 | ID=Msa0487610-mRNA-1:exon:2292;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6651197 | 6651576 | 6651197 | ID=Msa0487610-mRNA-1:exon:2293;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6651780 | 6651899 | 6651780 | ID=Msa0487610-mRNA-1:exon:2294;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6652865 | 6652932 | 6652865 | ID=Msa0487610-mRNA-1:exon:2295;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6653635 | 6653705 | 6653635 | ID=Msa0487610-mRNA-1:exon:2296;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6653788 | 6653841 | 6653788 | ID=Msa0487610-mRNA-1:exon:2297;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6653949 | 6654008 | 6653949 | ID=Msa0487610-mRNA-1:exon:2298;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6654314 | 6654487 | 6654314 | ID=Msa0487610-mRNA-1:exon:2299;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6654584 | 6654740 | 6654584 | ID=Msa0487610-mRNA-1:exon:2300;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6654945 | 6655036 | 6654945 | ID=Msa0487610-mRNA-1:exon:2301;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6655133 | 6655268 | 6655133 | ID=Msa0487610-mRNA-1:exon:2302;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6655476 | 6655543 | 6655476 | ID=Msa0487610-mRNA-1:exon:2303;Parent=Msa0487610-mRNA-1 |
| chr3_4 | exon | 6656094 | 6656434 | 6656094 | ID=Msa0487610-mRNA-1:exon:2304;Parent=Msa0487610-mRNA-1 |
| chr3_4 | five_prime_UTR | 6649820 | 6649891 | 6649820 | ID=Msa0487610-mRNA-1:five_prime_utr;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6649892 | 6650032 | 6649892 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6651197 | 6651576 | 6651197 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6651780 | 6651899 | 6651780 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6652865 | 6652932 | 6652865 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6653635 | 6653705 | 6653635 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6653788 | 6653841 | 6653788 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6653949 | 6654008 | 6653949 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6654314 | 6654487 | 6654314 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6654584 | 6654740 | 6654584 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6654945 | 6655036 | 6654945 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6655133 | 6655268 | 6655133 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6655476 | 6655543 | 6655476 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | CDS | 6656094 | 6656231 | 6656094 | ID=Msa0487610-mRNA-1:cds;Parent=Msa0487610-mRNA-1 |
| chr3_4 | three_prime_UTR | 6656232 | 6656434 | 6656232 | ID=Msa0487610-mRNA-1:three_prime_utr;Parent=Msa0487610-mRNA-1 |
| Gene Sequence |
| Protein sequence |
