Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820120 | RZB67441.1 | 85.909 | 660 | 52 | 2 | 8 | 627 | 432 | 1090 | 0.0 | 1169 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820120 | sp|Q84WU2|UBP13_ARATH | 75.281 | 534 | 129 | 3 | 95 | 627 | 584 | 1115 | 0.0 | 835 |
| Msa0820120 | sp|Q84WU2|UBP13_ARATH | 85.714 | 112 | 16 | 0 | 8 | 119 | 431 | 542 | 2.57e-55 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820120 | A0A445H1X0 | 85.909 | 660 | 52 | 2 | 8 | 627 | 432 | 1090 | 0.0 | 1169 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0820120 | 0.801740 | 7.807148e-49 | -8.615850e-47 |
| Msa0114060 | Msa0820120 | 0.805191 | 1.503812e-49 | -8.615850e-47 |
| Msa0616160 | Msa0820120 | 0.840077 | 1.080578e-57 | -8.615850e-47 |
| Msa0649110 | Msa0820120 | 0.827781 | 1.294344e-54 | -8.615850e-47 |
| Msa0681250 | Msa0820120 | 0.808340 | 3.250390e-50 | -8.615850e-47 |
| Msa0681270 | Msa0820120 | 0.818187 | 2.233827e-52 | -8.615850e-47 |
| Msa0766630 | Msa0820120 | 0.806323 | 8.697182e-50 | -8.615850e-47 |
| Msa0802010 | Msa0820120 | 0.805722 | 1.163466e-49 | -8.615850e-47 |
| Msa0820120 | Msa0820850 | 0.811018 | 8.635728e-51 | -8.615850e-47 |
| Msa0820120 | Msa0860640 | 0.875275 | 3.504142e-68 | -8.615850e-47 |
| Msa0820120 | Msa0861130 | 0.807170 | 5.762091e-50 | -8.615850e-47 |
| Msa0820120 | Msa0861920 | 0.800209 | 1.604849e-48 | -8.615850e-47 |
| Msa0820120 | Msa0885280 | 0.816825 | 4.529777e-52 | -8.615850e-47 |
| Msa0820120 | Msa0895120 | 0.821542 | 3.821201e-53 | -8.615850e-47 |
| Msa0820120 | Msa0925290 | 0.852638 | 4.046953e-61 | -8.615850e-47 |
| Msa0820120 | Msa1075650 | 0.809643 | 1.709624e-50 | -8.615850e-47 |
| Msa0820120 | Msa1083300 | 0.805913 | 1.061193e-49 | -8.615850e-47 |
| Msa0820120 | Msa1108760 | 0.807896 | 4.040423e-50 | -8.615850e-47 |
| Msa0820120 | Msa1249490 | 0.807412 | 5.119577e-50 | -8.615850e-47 |
| Msa0820120 | Msa1319800 | 0.801036 | 1.088234e-48 | -8.615850e-47 |
| Msa0820120 | Msa1398340 | 0.809326 | 2.000034e-50 | -8.615850e-47 |
| Msa0820120 | Msa1411020 | 0.814080 | 1.848109e-51 | -8.615850e-47 |
| Msa0820120 | Msa1424290 | 0.814030 | 1.896018e-51 | -8.615850e-47 |
| Msa0820120 | Msa1434350 | 0.815395 | 9.449948e-52 | -8.615850e-47 |
| Msa0820120 | Msa1439320 | 0.818255 | 2.156048e-52 | -8.615850e-47 |
| Msa0820120 | Msa1452240 | 0.813293 | 2.753944e-51 | -8.615850e-47 |
| Msa0820120 | Msa1453910 | 0.928703 | 1.982473e-92 | -8.615850e-47 |
| Msa0127650 | Msa0820120 | 0.803200 | 3.905355e-49 | -8.615850e-47 |
| Msa0188900 | Msa0820120 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa0229990 | Msa0820120 | 0.806316 | 8.729038e-50 | -8.615850e-47 |
| Msa0386580 | Msa0820120 | 0.803015 | 4.265362e-49 | -8.615850e-47 |
| Msa0392400 | Msa0820120 | 0.831505 | 1.607213e-55 | -8.615850e-47 |
| Msa0392440 | Msa0820120 | 0.850261 | 1.904194e-60 | -8.615850e-47 |
| Msa0402290 | Msa0820120 | 0.805815 | 1.112312e-49 | -8.615850e-47 |
| Msa0440750 | Msa0820120 | 0.830096 | 3.560255e-55 | -8.615850e-47 |
| Msa0464380 | Msa0820120 | 0.809036 | 2.307355e-50 | -8.615850e-47 |
| Msa0340470 | Msa0820120 | 0.804317 | 2.288742e-49 | -8.615850e-47 |
| Msa0345970 | Msa0820120 | 0.803001 | 4.293584e-49 | -8.615850e-47 |
| Msa0355220 | Msa0820120 | 0.806637 | 7.466277e-50 | -8.615850e-47 |
| Msa0487550 | Msa0820120 | 0.817022 | 4.089739e-52 | -8.615850e-47 |
| Msa0487610 | Msa0820120 | 0.800663 | 1.296856e-48 | -8.615850e-47 |
| Msa0516170 | Msa0820120 | 0.808904 | 2.462740e-50 | -8.615850e-47 |
| Msa0545210 | Msa0820120 | 0.814296 | 1.656432e-51 | -8.615850e-47 |
| Msa0602390 | Msa0820120 | 0.831084 | 2.039479e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820120 | MtrunA17_Chr5g0439971 | 98.824 | 510 | 6 | 0 | 118 | 627 | 614 | 1123 | 0.0 | 1046 |
| Msa0820120 | MtrunA17_Chr5g0439971 | 89.831 | 118 | 12 | 0 | 8 | 125 | 437 | 554 | 3.62e-62 | 223 |
| Msa0820120 | MtrunA17_Chr3g0119031 | 89.804 | 510 | 52 | 0 | 118 | 627 | 609 | 1118 | 0.0 | 963 |
| Msa0820120 | MtrunA17_Chr3g0119031 | 85.714 | 112 | 16 | 0 | 8 | 119 | 432 | 543 | 1.59e-56 | 207 |
| Msa0820120 | MtrunA17_Chr1g0170261 | 74.560 | 511 | 127 | 2 | 118 | 627 | 611 | 1119 | 0.0 | 812 |
| Msa0820120 | MtrunA17_Chr1g0170261 | 79.464 | 112 | 23 | 0 | 8 | 119 | 434 | 545 | 2.23e-53 | 197 |
| Msa0820120 | MtrunA17_Chr5g0443151 | 57.639 | 288 | 99 | 7 | 105 | 386 | 12 | 282 | 1.32e-95 | 305 |
| Msa0820120 | MtrunA17_Chr5g0443194 | 71.134 | 194 | 54 | 2 | 118 | 311 | 227 | 418 | 3.90e-86 | 277 |
| Msa0820120 | MtrunA17_Chr5g0442971 | 56.061 | 264 | 62 | 3 | 105 | 326 | 223 | 474 | 1.87e-73 | 250 |
| Msa0820120 | MtrunA17_Chr5g0443181 | 49.785 | 233 | 65 | 3 | 95 | 326 | 141 | 322 | 4.23e-58 | 199 |
| Msa0820120 | MtrunA17_Chr5g0443141 | 60.714 | 56 | 21 | 1 | 275 | 330 | 2 | 56 | 1.92e-12 | 68.6 |
| Msa0820120 | MtrunA17_Chr5g0441861 | 61.364 | 44 | 17 | 0 | 268 | 311 | 2 | 45 | 7.93e-11 | 58.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0820120 | AT3G11910.4 | 75.281 | 534 | 129 | 3 | 95 | 627 | 583 | 1114 | 0.0 | 835 |
| Msa0820120 | AT3G11910.4 | 85.714 | 112 | 16 | 0 | 8 | 119 | 430 | 541 | 2.58e-56 | 206 |
| Msa0820120 | AT3G11910.3 | 75.281 | 534 | 129 | 3 | 95 | 627 | 584 | 1115 | 0.0 | 835 |
| Msa0820120 | AT3G11910.3 | 85.714 | 112 | 16 | 0 | 8 | 119 | 431 | 542 | 2.61e-56 | 206 |
| Msa0820120 | AT3G11910.1 | 75.281 | 534 | 129 | 3 | 95 | 627 | 584 | 1115 | 0.0 | 835 |
| Msa0820120 | AT3G11910.1 | 85.714 | 112 | 16 | 0 | 8 | 119 | 431 | 542 | 2.61e-56 | 206 |
| Msa0820120 | AT3G11910.2 | 75.281 | 534 | 129 | 3 | 95 | 627 | 583 | 1114 | 0.0 | 835 |
| Msa0820120 | AT3G11910.2 | 85.714 | 112 | 16 | 0 | 8 | 119 | 430 | 541 | 2.58e-56 | 206 |
| Msa0820120 | AT5G06600.1 | 73.783 | 534 | 136 | 4 | 95 | 627 | 586 | 1116 | 0.0 | 804 |
| Msa0820120 | AT5G06600.1 | 74.286 | 140 | 31 | 2 | 8 | 146 | 432 | 567 | 1.06e-55 | 204 |
| Msa0820120 | AT5G06600.2 | 73.783 | 534 | 136 | 4 | 95 | 627 | 585 | 1115 | 0.0 | 803 |
| Msa0820120 | AT5G06600.2 | 74.286 | 140 | 31 | 2 | 8 | 146 | 431 | 566 | 1.10e-55 | 204 |
| Msa0820120 | AT5G06600.3 | 72.250 | 400 | 108 | 3 | 95 | 493 | 586 | 983 | 0.0 | 586 |
| Msa0820120 | AT5G06600.3 | 74.286 | 140 | 31 | 2 | 8 | 146 | 432 | 567 | 6.71e-56 | 204 |
Find 167 sgRNAs with CRISPR-Local
Find 555 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTACAGCAAATTCAGAATTT+TGG | 0.124418 | 5_3:-57274918 | Msa0820120:intron |
| AAGATATTGCTGAGCATTTA+AGG | 0.152035 | 5_3:-57280419 | Msa0820120:CDS |
| CATGTAAGCATTTGAATATT+TGG | 0.186742 | 5_3:+57280497 | None:intergenic |
| TCAGCGTTCTTCTATATCTA+TGG | 0.217400 | 5_3:-57274126 | Msa0820120:three_prime_UTR |
| GCCAGTAAAGATTTATAATT+AGG | 0.219724 | 5_3:-57274189 | Msa0820120:exon |
| GAATATTTGGTGAATTTAAA+AGG | 0.223359 | 5_3:+57280510 | None:intergenic |
| GCTCCTCCATTGCCCGTTTA+GGG | 0.245382 | 5_3:+57280682 | None:intergenic |
| CTTAGCAAGGTTAAATAAAA+TGG | 0.260792 | 5_3:-57277532 | Msa0820120:CDS |
| CTCCTACAGTGCTTTGCTTT+GGG | 0.266312 | 5_3:+57275924 | None:intergenic |
| TCCTAATTATAAATCTTTAC+TGG | 0.276107 | 5_3:+57274188 | None:intergenic |
| TGCTCCTCCATTGCCCGTTT+AGG | 0.285036 | 5_3:+57280681 | None:intergenic |
| CATCTTCCTTTGGTTTATCT+AGG | 0.286963 | 5_3:+57276633 | None:intergenic |
| CTGTACAATTCCAGCGCTTT+TGG | 0.291139 | 5_3:-57278516 | Msa0820120:CDS |
| GTGTGGGGTGAGCCTGATTT+TGG | 0.302835 | 5_3:+57276424 | None:intergenic |
| TACTTGATAGGCTGGGGTTT+TGG | 0.314921 | 5_3:+57276383 | None:intergenic |
| TCCTGATGTGCCTTCTTACT+TGG | 0.321434 | 5_3:-57276931 | Msa0820120:CDS |
| GTCTTCTCAGGTGGTGCAAT+GGG | 0.326614 | 5_3:+57277744 | None:intergenic |
| TCTCCTACAGTGCTTTGCTT+TGG | 0.335296 | 5_3:+57275923 | None:intergenic |
| TTGCTACTTCCATTGGTCTA+TGG | 0.338558 | 5_3:-57273921 | Msa0820120:three_prime_UTR |
| AAAAGGAGTGTTATTGAATC+CGG | 0.344010 | 5_3:+57280527 | None:intergenic |
| GATTTCCCCTCCCAGCGTTC+TGG | 0.345411 | 5_3:-57282082 | Msa0820120:CDS |
| AGGCAGAAGTCATCTTCCTT+TGG | 0.347507 | 5_3:+57276623 | None:intergenic |
| TATTGTAGGTTGTTCACTTT+CGG | 0.351875 | 5_3:-57276658 | Msa0820120:intron |
| ATTTGTGTCAATGGCCGATT+AGG | 0.352208 | 5_3:+57278460 | None:intergenic |
| AATGTTAATTTCTTGTCAAT+AGG | 0.359284 | 5_3:+57277115 | None:intergenic |
| AAGATCATATGCTGCTAATC+AGG | 0.362054 | 5_3:-57274385 | Msa0820120:intron |
| AAAACATAAATGATCAATAC+TGG | 0.377208 | 5_3:-57275308 | Msa0820120:CDS |
| TTCTAGCGAGGGCTGCAAAA+TGG | 0.378383 | 5_3:-57273735 | Msa0820120:three_prime_UTR |
| AGCAACCTAAGCTCAGTATC+AGG | 0.383002 | 5_3:+57275586 | None:intergenic |
| CCCCTCGGTACTTGATAGGC+TGG | 0.387609 | 5_3:+57276375 | None:intergenic |
| TAAAGTCCAATCTCTTCTTC+AGG | 0.392869 | 5_3:+57277498 | None:intergenic |
| ATATCATCCTTTGTCTTCTC+AGG | 0.393483 | 5_3:+57277732 | None:intergenic |
| AAATATTCTGCAGCACCATT+TGG | 0.402398 | 5_3:-57273642 | Msa0820120:three_prime_UTR |
| CCCTCGGTACTTGATAGGCT+GGG | 0.411961 | 5_3:+57276376 | None:intergenic |
| GCAATATGGTGGTGAGGAAG+AGG | 0.416940 | 5_3:-57280661 | Msa0820120:intron |
| AGTAGCTGAACAACTTGGTT+TGG | 0.417406 | 5_3:-57276456 | Msa0820120:CDS |
| CCCTTTGATGGCAGTTATGT+TGG | 0.420767 | 5_3:-57277594 | Msa0820120:intron |
| TGACAAAAGAAGACCCTAAA+CGG | 0.421353 | 5_3:-57280695 | Msa0820120:CDS |
| AGAAGAGATTGGACTTTATG+AGG | 0.423419 | 5_3:-57277493 | Msa0820120:intron |
| ATCTTCCTTTGGTTTATCTA+GGG | 0.427379 | 5_3:+57276634 | None:intergenic |
| GCTTCCTCAATTTGTGTCAA+TGG | 0.429761 | 5_3:+57278451 | None:intergenic |
| AGATATTGCTGAGCATTTAA+GGG | 0.439270 | 5_3:-57280418 | Msa0820120:intron |
| ACCATACATATCGTCCTAAT+CGG | 0.439597 | 5_3:-57278474 | Msa0820120:CDS |
| TCCAAGTAAGAAGGCACATC+AGG | 0.444510 | 5_3:+57276930 | None:intergenic |
| TTATAATTAGGAAATCAGTA+TGG | 0.444819 | 5_3:-57274177 | Msa0820120:exon |
| CGGGCAATGGAGGAGCAATA+TGG | 0.445556 | 5_3:-57280675 | Msa0820120:CDS |
| TGGACGACCCATCCAAAATC+AGG | 0.448812 | 5_3:-57276436 | Msa0820120:CDS |
| TGTCTTCTCAGGTGGTGCAA+TGG | 0.452606 | 5_3:+57277743 | None:intergenic |
| TCCACCCCTCGGTACTTGAT+AGG | 0.456088 | 5_3:+57276371 | None:intergenic |
| CAGCGTTCTTCTATATCTAT+GGG | 0.456105 | 5_3:-57274125 | Msa0820120:three_prime_UTR |
| GAAGAGACGTATATGGTGCC+TGG | 0.458856 | 5_3:-57274449 | Msa0820120:CDS |
| ACCTTGACAAACTCATCGTC+TGG | 0.460568 | 5_3:+57274816 | None:intergenic |
| GGTGCCTGGGAGCAGTATCT+TGG | 0.463110 | 5_3:-57274435 | Msa0820120:CDS |
| TGACAGAGAAGAGACGTATA+TGG | 0.464091 | 5_3:-57274456 | Msa0820120:intron |
| GGAAGTTGTTCTTCATGTCC+AGG | 0.466129 | 5_3:-57273900 | Msa0820120:three_prime_UTR |
| TACCGTAGCTCCTCTTTCTC+AGG | 0.468503 | 5_3:+57277684 | None:intergenic |
| CACTATACTCACTTCATCCT+TGG | 0.468835 | 5_3:+57276142 | None:intergenic |
| TATGATCCTGAAGAAGAGAT+TGG | 0.473570 | 5_3:-57277504 | Msa0820120:CDS |
| ATTAACATTTCGAGCAAGCC+AGG | 0.480714 | 5_3:-57277101 | Msa0820120:intron |
| GCCGATTAGGACGATATGTA+TGG | 0.481513 | 5_3:+57278473 | None:intergenic |
| TCTAATGAGCTTACATCTCC+AGG | 0.482490 | 5_3:+57276603 | None:intergenic |
| ATAGGCTCACACATCACGTT+TGG | 0.484356 | 5_3:+57277133 | None:intergenic |
| GTTATATGATCCTGAGAAAG+AGG | 0.486614 | 5_3:-57277694 | Msa0820120:CDS |
| GAAGAGGTTGCTAAAGAGTT+CGG | 0.489408 | 5_3:-57278544 | Msa0820120:CDS |
| TTGTGATGATCAATATTTGA+CGG | 0.490693 | 5_3:-57282109 | Msa0820120:CDS |
| CCGTGAATGCAGCTTGAAGA+TGG | 0.493627 | 5_3:-57277011 | Msa0820120:intron |
| GCAAGGTTAAATAAAATGGC+TGG | 0.494326 | 5_3:-57277528 | Msa0820120:CDS |
| AAAGGAGTGTTATTGAATCC+GGG | 0.495744 | 5_3:+57280528 | None:intergenic |
| CTGGGAGCAGTATCTTGGCT+TGG | 0.500471 | 5_3:-57274430 | Msa0820120:CDS |
| GGAATATGTGCACAATCGCC+AGG | 0.502785 | 5_3:-57276910 | Msa0820120:intron |
| TGCTCCTCATTATCCGTAGC+AGG | 0.506305 | 5_3:+57276963 | None:intergenic |
| GACAAAAGAAGACCCTAAAC+GGG | 0.510912 | 5_3:-57280694 | Msa0820120:CDS |
| TTGCCCAAAGCCAAAAGCGC+TGG | 0.513860 | 5_3:+57278506 | None:intergenic |
| TTTGGAAGTGGAGCGTGGAC+CGG | 0.515148 | 5_3:-57277866 | Msa0820120:intron |
| ATCCCTCTGCCAGAATTACA+AGG | 0.515348 | 5_3:-57276200 | Msa0820120:CDS |
| ACACGTGGATTAGACGATCA+TGG | 0.518212 | 5_3:+57275071 | None:intergenic |
| TATGCTCGTTCACTACAATC+AGG | 0.520033 | 5_3:-57276336 | Msa0820120:intron |
| CAGTTACCACAGACAAATCC+CGG | 0.520297 | 5_3:-57280546 | Msa0820120:CDS |
| GCTTTGCTTTGGGAGTCTGA+TGG | 0.521563 | 5_3:+57275934 | None:intergenic |
| AAAGGAAGATGACTTCTGCC+TGG | 0.521922 | 5_3:-57276621 | Msa0820120:CDS |
| CTCGTCCTGATACTGAGCTT+AGG | 0.523216 | 5_3:-57275591 | Msa0820120:CDS |
| AAACCTTGTAATTCTGGCAG+AGG | 0.523544 | 5_3:+57276197 | None:intergenic |
| CACGTGGATTAGACGATCAT+GGG | 0.524119 | 5_3:+57275072 | None:intergenic |
| AGACACTACTCAGAACCAAA+TGG | 0.526141 | 5_3:-57275035 | Msa0820120:intron |
| GTTGAGAATAGCAGTTGTGT+GGG | 0.529254 | 5_3:+57276408 | None:intergenic |
| CAAAAGCGCTGGAATTGTAC+AGG | 0.531856 | 5_3:+57278517 | None:intergenic |
| GTTCACAGTGGTGGTGTGCA+TGG | 0.533539 | 5_3:-57282060 | Msa0820120:CDS |
| GGCTCCTGCTACGGATAATG+AGG | 0.536307 | 5_3:-57276967 | Msa0820120:CDS |
| AACCTTGCTAAGATTTCTGA+TGG | 0.537381 | 5_3:+57277543 | None:intergenic |
| TCATCCTTTGTCTTCTCAGG+TGG | 0.539767 | 5_3:+57277735 | None:intergenic |
| CCTCGGTACTTGATAGGCTG+GGG | 0.540177 | 5_3:+57276377 | None:intergenic |
| AGAAGACCCTAAACGGGCAA+TGG | 0.541064 | 5_3:-57280688 | Msa0820120:CDS |
| GTGACCGAGGTGGTGTGTGC+AGG | 0.543864 | 5_3:-57274042 | Msa0820120:three_prime_UTR |
| CTTTCAGAAGGCTCCTGCTA+CGG | 0.547214 | 5_3:-57276976 | Msa0820120:CDS |
| GTTCATGTAGTGTCTTGTAA+AGG | 0.547358 | 5_3:-57273703 | Msa0820120:three_prime_UTR |
| TGCACATATTCCAAGTAAGA+AGG | 0.547368 | 5_3:+57276921 | None:intergenic |
| GCCACAAGAGGTGAACCAAA+TGG | 0.548286 | 5_3:+57273627 | None:intergenic |
| GCTTTGGGAGTCTGATGGTG+TGG | 0.558257 | 5_3:+57275939 | None:intergenic |
| TTTCACATATGATGATGTTG+TGG | 0.559521 | 5_3:-57276483 | Msa0820120:CDS |
| AGCGTTCTGGTTCACAGTGG+TGG | 0.559857 | 5_3:-57282069 | Msa0820120:CDS |
| GAGAGAGTAGCTGAACAACT+TGG | 0.567724 | 5_3:-57276461 | Msa0820120:CDS |
| GTATATACGTGAAGCGGACA+AGG | 0.568613 | 5_3:-57280469 | Msa0820120:CDS |
| ATACAACTTCAGAGTCCTCA+AGG | 0.568662 | 5_3:+57274608 | None:intergenic |
| GAGTATATACAGAGTATAGT+TGG | 0.568711 | 5_3:-57273821 | Msa0820120:three_prime_UTR |
| AAGAGACGTATATGGTGCCT+GGG | 0.569774 | 5_3:-57274448 | Msa0820120:CDS |
| TGTTGAGAATAGCAGTTGTG+TGG | 0.569965 | 5_3:+57276407 | None:intergenic |
| ATCCTGAGAAAGAGGAGCTA+CGG | 0.572589 | 5_3:-57277686 | Msa0820120:intron |
| GAAAGAGATTGCTACCTCCT+CGG | 0.573364 | 5_3:+57275275 | None:intergenic |
| TGCAGCCTCCATATACTCGT+TGG | 0.574339 | 5_3:-57273669 | Msa0820120:three_prime_UTR |
| ACCACTGTGAACCAGAACGC+TGG | 0.575386 | 5_3:+57282071 | None:intergenic |
| CATACACGAATGTGAGACTT+TGG | 0.575576 | 5_3:-57274877 | Msa0820120:CDS |
| AACCTTGTAATTCTGGCAGA+GGG | 0.576300 | 5_3:+57276198 | None:intergenic |
| GGTACAAATTTGATGATGAG+AGG | 0.578779 | 5_3:-57280719 | Msa0820120:CDS |
| GTGAACCAGAACGCTGGGAG+GGG | 0.580616 | 5_3:+57282077 | None:intergenic |
| CAGATAAATGTTCCACCCCT+CGG | 0.582634 | 5_3:+57276360 | None:intergenic |
| ATATTCAAATGCTTACATGC+TGG | 0.583488 | 5_3:-57280493 | Msa0820120:CDS |
| CCCAGCCTATCAAGTACCGA+GGG | 0.583532 | 5_3:-57276376 | Msa0820120:CDS |
| CTCCCAAAGCAAAGCACTGT+AGG | 0.585482 | 5_3:-57275926 | Msa0820120:CDS |
| TTGAATCCGGGATTTGTCTG+TGG | 0.586663 | 5_3:+57280540 | None:intergenic |
| TCAGAGTCCTCAAGGTACTC+AGG | 0.587164 | 5_3:+57274616 | None:intergenic |
| AGACCCTAAACGGGCAATGG+AGG | 0.590791 | 5_3:-57280685 | Msa0820120:CDS |
| CCACTGTGAACCAGAACGCT+GGG | 0.592002 | 5_3:+57282072 | None:intergenic |
| TGTGAACCAGAACGCTGGGA+GGG | 0.593473 | 5_3:+57282076 | None:intergenic |
| AGATATTATATGCTTTCAGA+AGG | 0.593862 | 5_3:-57276988 | Msa0820120:CDS |
| TCGGCCATTGACACAAATTG+AGG | 0.594021 | 5_3:-57278455 | Msa0820120:CDS |
| TAGCAGTGTTAATTCTAGCG+AGG | 0.595497 | 5_3:-57273747 | Msa0820120:three_prime_UTR |
| TCCAGACGATGAGTTTGTCA+AGG | 0.597360 | 5_3:-57274817 | Msa0820120:intron |
| GTACAAATTTGATGATGAGA+GGG | 0.599822 | 5_3:-57280718 | Msa0820120:CDS |
| CTTTAGTAAAATGATACACG+TGG | 0.603666 | 5_3:+57275056 | None:intergenic |
| ATATACAGAGTATAGTTGGT+TGG | 0.605440 | 5_3:-57273817 | Msa0820120:three_prime_UTR |
| AGCAGTGTTAATTCTAGCGA+GGG | 0.606629 | 5_3:-57273746 | Msa0820120:three_prime_UTR |
| CAAGCCAAGATACTGCTCCC+AGG | 0.610930 | 5_3:+57274431 | None:intergenic |
| AGTGATGATGATCAAGGACC+TGG | 0.611297 | 5_3:+57273882 | None:intergenic |
| CAGCGCAGTGATGATGATCA+AGG | 0.612702 | 5_3:+57273876 | None:intergenic |
| GCCTATCAAGTACCGAGGGG+TGG | 0.613647 | 5_3:-57276372 | Msa0820120:CDS |
| AAAACAGGCAAAGCAGCGAA+AGG | 0.615163 | 5_3:-57274096 | Msa0820120:three_prime_UTR |
| CACAGTGGTGGTGTGCATGG+TGG | 0.617596 | 5_3:-57282057 | Msa0820120:CDS |
| TGCGTTTCATCATGCTACCA+AGG | 0.622353 | 5_3:-57276159 | Msa0820120:CDS |
| GAACAACTTCCATAGACCAA+TGG | 0.622965 | 5_3:+57273912 | None:intergenic |
| AGACTCTTTGTGAACAACAC+TGG | 0.625132 | 5_3:-57277570 | Msa0820120:CDS |
| AACCATCAGAAATCTTAGCA+AGG | 0.627786 | 5_3:-57277545 | Msa0820120:CDS |
| AAAATCTGAAAGCGACCAAG+AGG | 0.628167 | 5_3:+57273784 | None:intergenic |
| GCGAAAGGCTAATTATGCGT+AGG | 0.631568 | 5_3:-57274081 | Msa0820120:three_prime_UTR |
| CTGTGAACCAGAACGCTGGG+AGG | 0.636082 | 5_3:+57282075 | None:intergenic |
| GGCCGACTCTCTCTGATCAG+TGG | 0.636295 | 5_3:-57282014 | Msa0820120:intron |
| GGAGGAGCAATATGGTGGTG+AGG | 0.636914 | 5_3:-57280667 | Msa0820120:CDS |
| TACTTCATAGTACAATATGT+CGG | 0.641200 | 5_3:+57276229 | None:intergenic |
| AAAGCTCAAGGAGCTGTGGT+CGG | 0.652247 | 5_3:+57273944 | None:intergenic |
| ATACTGGACACTACGAGCCG+AGG | 0.654398 | 5_3:-57275292 | Msa0820120:CDS |
| TTATGCCAACGAGTATATGG+AGG | 0.655481 | 5_3:+57273664 | None:intergenic |
| CCCCAGCCTATCAAGTACCG+AGG | 0.655681 | 5_3:-57276377 | Msa0820120:CDS |
| CACTGTAGGAGATGTCCTTG+AGG | 0.656432 | 5_3:-57275912 | Msa0820120:CDS |
| GCTGGTGTATATACGTGAAG+CGG | 0.658117 | 5_3:-57280475 | Msa0820120:CDS |
| CTGGACACTACGAGCCGAGG+AGG | 0.660468 | 5_3:-57275289 | Msa0820120:intron |
| TTGAGAATAGCAGTTGTGTG+GGG | 0.660587 | 5_3:+57276409 | None:intergenic |
| TCGGTCCCTAGATAAACCAA+AGG | 0.670139 | 5_3:-57276639 | Msa0820120:CDS |
| TACCACTGATCAGAGAGAGT+CGG | 0.670322 | 5_3:+57282012 | None:intergenic |
| AGGGCGTCCTGAGTACCTTG+AGG | 0.672202 | 5_3:-57274623 | Msa0820120:CDS |
| AAGAAGGCACATCAGGATAG+CGG | 0.672277 | 5_3:+57276937 | None:intergenic |
| GCAATGGAGGAGCAATATGG+TGG | 0.673604 | 5_3:-57280672 | Msa0820120:CDS |
| ATTGAGAGAGATATCGAACA+AGG | 0.683338 | 5_3:-57277914 | Msa0820120:CDS |
| AAAACCTGCACACACCACCT+CGG | 0.685199 | 5_3:+57274038 | None:intergenic |
| TGCACCACCTGAGAAGACAA+AGG | 0.690536 | 5_3:-57277739 | Msa0820120:CDS |
| ACGTGGATTAGACGATCATG+GGG | 0.702245 | 5_3:+57275073 | None:intergenic |
| TTTGAGATCAGTGACCGAGG+TGG | 0.718414 | 5_3:-57274052 | Msa0820120:three_prime_UTR |
| CCCAGCGTTCTGGTTCACAG+TGG | 0.725867 | 5_3:-57282072 | Msa0820120:CDS |
| CCAGCCTATCAAGTACCGAG+GGG | 0.766069 | 5_3:-57276375 | Msa0820120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTTTTTTTATTCTCTTA+TGG | - | chr5_3:57274143-57274162 | Msa0820120:three_prime_UTR | 10.0% |
| !!! | ATACTTATTTTTATAAGATA+AGG | - | chr5_3:57274478-57274497 | Msa0820120:intron | 10.0% |
| !!! | ATTTTATTTACAAATGTTAT+TGG | + | chr5_3:57274891-57274910 | None:intergenic | 10.0% |
| !! | TATATCTATATCTATATATA+GGG | - | chr5_3:57275481-57275500 | Msa0820120:intron | 10.0% |
| !! | TTCCTTTATTATAATTTATT+AGG | + | chr5_3:57276714-57276733 | None:intergenic | 10.0% |
| !! | AAAATGTAATTAAAAGAATT+AGG | + | chr5_3:57281081-57281100 | None:intergenic | 10.0% |
| !!! | TCTTTTAATTACATTTTTTT+TGG | - | chr5_3:57281084-57281103 | Msa0820120:intron | 10.0% |
| !! | TAATTTCAATTTCATATATT+TGG | - | chr5_3:57281244-57281263 | Msa0820120:intron | 10.0% |
| !! | AATTTCAATTTCATATATTT+GGG | - | chr5_3:57281245-57281264 | Msa0820120:intron | 10.0% |
| !! | GTAAAATAAATTTGAGAATT+GGG | + | chr5_3:57273938-57273957 | None:intergenic | 15.0% |
| !! | TGTAAAATAAATTTGAGAAT+TGG | + | chr5_3:57273939-57273958 | None:intergenic | 15.0% |
| !!! | TTAAGTTTTTTTATAGATAG+TGG | + | chr5_3:57274401-57274420 | None:intergenic | 15.0% |
| !!! | TAAATAAAATTTTGTATTGC+AGG | - | chr5_3:57274901-57274920 | Msa0820120:CDS | 15.0% |
| !! | AAATAACAAATAAAGTTCAA+TGG | + | chr5_3:57274949-57274968 | None:intergenic | 15.0% |
| !!! | GGTAGTTATTTTATTTATAA+TGG | - | chr5_3:57275117-57275136 | Msa0820120:intron | 15.0% |
| !!! | TATTTTATTTATAATGGTTG+TGG | - | chr5_3:57275123-57275142 | Msa0820120:intron | 15.0% |
| !! | CTATATCTATATCTATATAT+AGG | - | chr5_3:57275480-57275499 | Msa0820120:intron | 15.0% |
| !! | GAAACAAAAAAAAAAAATGT+TGG | + | chr5_3:57275896-57275915 | None:intergenic | 15.0% |
| !!! | AAAACTGAATTTTGTTATTT+AGG | - | chr5_3:57276649-57276668 | Msa0820120:CDS | 15.0% |
| !!! | AAACTGAATTTTGTTATTTA+GGG | - | chr5_3:57276650-57276669 | Msa0820120:CDS | 15.0% |
| !! | AGCCTAATAAATTATAATAA+AGG | - | chr5_3:57276709-57276728 | Msa0820120:intron | 15.0% |
| !!! | TAAAATAATAGTTTTCTATG+AGG | + | chr5_3:57276992-57277011 | None:intergenic | 15.0% |
| !!! | TTTGATTTCATTTTTATGTT+AGG | - | chr5_3:57277566-57277585 | Msa0820120:CDS | 15.0% |
| !! | AAATTAGATCAAATAGAAAT+CGG | + | chr5_3:57277786-57277805 | None:intergenic | 15.0% |
| !!! | TCTTGATTTTTAACATATAT+TGG | - | chr5_3:57278103-57278122 | Msa0820120:intron | 15.0% |
| !!! | CTTGATTTTTAACATATATT+GGG | - | chr5_3:57278104-57278123 | Msa0820120:intron | 15.0% |
| !!! | TTGATTTTTAACATATATTG+GGG | - | chr5_3:57278105-57278124 | Msa0820120:intron | 15.0% |
| !!! | ATTTTAATAATTGTTGATTC+AGG | - | chr5_3:57279788-57279807 | Msa0820120:intron | 15.0% |
| !! | GATATATAATTAAGTAAATG+TGG | + | chr5_3:57280103-57280122 | None:intergenic | 15.0% |
| !! | AGATGATATTCAAAATACTT+TGG | + | chr5_3:57274178-57274197 | None:intergenic | 20.0% |
| !! | AAATGATATGATAACTTATC+AGG | + | chr5_3:57274206-57274225 | None:intergenic | 20.0% |
| !! | AAATTGTTTAGATCAAACAT+TGG | - | chr5_3:57274454-57274473 | Msa0820120:intron | 20.0% |
| !! | GAAAATTACTTAAGTCTTAA+AGG | - | chr5_3:57274923-57274942 | Msa0820120:intron | 20.0% |
| !! | GTTAAAATACAATATACAAG+TGG | + | chr5_3:57275192-57275211 | None:intergenic | 20.0% |
| !!! | GAATATTTGGTGAATTTAAA+AGG | + | chr5_3:57275250-57275269 | None:intergenic | 20.0% |
| !!! | AATATAATTTGTGAAGTTCA+TGG | - | chr5_3:57277118-57277137 | Msa0820120:CDS | 20.0% |
| !!! | CTTCGTTATTTTATTGTTTT+TGG | - | chr5_3:57277615-57277634 | Msa0820120:intron | 20.0% |
| !!! | TGCAGAATTAAAATTGTTTT+TGG | - | chr5_3:57277873-57277892 | Msa0820120:CDS | 20.0% |
| !!! | ATTAAAATTGTTTTTGGAAG+TGG | - | chr5_3:57277879-57277898 | Msa0820120:CDS | 20.0% |
| !! | CTTCATAATATAAAGATTAC+CGG | + | chr5_3:57277913-57277932 | None:intergenic | 20.0% |
| !! | GACAATCTACATTATTATTT+AGG | - | chr5_3:57277982-57278001 | Msa0820120:intron | 20.0% |
| !! | TTAATTTCCTACACAAATAT+AGG | + | chr5_3:57278597-57278616 | None:intergenic | 20.0% |
| !! | AATGTTAATTTCTTGTCAAT+AGG | + | chr5_3:57278645-57278664 | None:intergenic | 20.0% |
| !!! | AAATTGGTAGATTTCATTTT+TGG | + | chr5_3:57278924-57278943 | None:intergenic | 20.0% |
| !!! | ATGTTTTCAATCTTTTCATT+GGG | + | chr5_3:57280436-57280455 | None:intergenic | 20.0% |
| !!! | TATGTTTTCAATCTTTTCAT+TGG | + | chr5_3:57280437-57280456 | None:intergenic | 20.0% |
| !! | AAAACATAAATGATCAATAC+TGG | - | chr5_3:57280449-57280468 | Msa0820120:CDS | 20.0% |
| !!! | ATTTATTTTTCTACAGAAAC+CGG | + | chr5_3:57280610-57280629 | None:intergenic | 20.0% |
| !! | AATTAAAACGATATACCATT+TGG | + | chr5_3:57280740-57280759 | None:intergenic | 20.0% |
| !!! | ATGCATAAACTTTTATAACT+TGG | - | chr5_3:57280803-57280822 | Msa0820120:intron | 20.0% |
| !!! | TCTTCTGTTATATGTTATTT+TGG | - | chr5_3:57281003-57281022 | Msa0820120:intron | 20.0% |
| !!! | AAATTTGCTTTTTTCTCATT+AGG | - | chr5_3:57281114-57281133 | Msa0820120:intron | 20.0% |
| !!! | AATTTGCTTTTTTCTCATTA+GGG | - | chr5_3:57281115-57281134 | Msa0820120:intron | 20.0% |
| !! | AACAAAAATGTAGTTTGAAA+AGG | + | chr5_3:57281523-57281542 | None:intergenic | 20.0% |
| !! | TCCTAATTATAAATCTTTAC+TGG | + | chr5_3:57281572-57281591 | None:intergenic | 20.0% |
| !! | TTATAATTAGGAAATCAGTA+TGG | - | chr5_3:57281580-57281599 | Msa0820120:intron | 20.0% |
| !!! | TATGTAATTCCTTTTTTTGA+TGG | - | chr5_3:57281757-57281776 | Msa0820120:intron | 20.0% |
| ! | TTGTGATGATCAATATTTGA+CGG | - | chr5_3:57273648-57273667 | Msa0820120:three_prime_UTR | 25.0% |
| !! | TACAAGTATATTTGTTAGAG+AGG | - | chr5_3:57273955-57273974 | Msa0820120:three_prime_UTR | 25.0% |
| !!! | AATTGCAAATCTTGTTTTGT+AGG | - | chr5_3:57274060-57274079 | Msa0820120:three_prime_UTR | 25.0% |
| !! | TTTTATAAGATAAGGTGAAG+TGG | - | chr5_3:57274486-57274505 | Msa0820120:intron | 25.0% |
| ! | TTGAAATATATGAATTGCTC+AGG | - | chr5_3:57275017-57275036 | Msa0820120:intron | 25.0% |
| ! | CATGTAAGCATTTGAATATT+TGG | + | chr5_3:57275263-57275282 | None:intergenic | 25.0% |
| !! | ATTAGTCATCTGAATTTGTT+TGG | + | chr5_3:57275449-57275468 | None:intergenic | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr5_3:57275603-57275622 | Msa0820120:CDS | 25.0% |
| !!! | AATACACCCACTTATTTTTT+AGG | - | chr5_3:57275659-57275678 | Msa0820120:intron | 25.0% |
| ! | GATACTCCTAAAAAATAAGT+GGG | + | chr5_3:57275668-57275687 | None:intergenic | 25.0% |
| ! | AGATACTCCTAAAAAATAAG+TGG | + | chr5_3:57275669-57275688 | None:intergenic | 25.0% |
| ! | ATAGTACAAAAGAAGATCAA+AGG | + | chr5_3:57275976-57275995 | None:intergenic | 25.0% |
| ! | TTGTATCAAATATTGTATCG+TGG | - | chr5_3:57276134-57276153 | Msa0820120:intron | 25.0% |
| ! | TGTATCAAATATTGTATCGT+GGG | - | chr5_3:57276135-57276154 | Msa0820120:intron | 25.0% |
| ! | ACTGATAACATATGATACTT+AGG | - | chr5_3:57276465-57276484 | Msa0820120:CDS | 25.0% |
| !! | AAAATTCATGAAGCTTTAGT+TGG | - | chr5_3:57277030-57277049 | Msa0820120:intron | 25.0% |
| !!! | TGTGTTATTTTTTCTGAGTT+TGG | - | chr5_3:57277156-57277175 | Msa0820120:intron | 25.0% |
| ! | ATAAACTTTAAGCAAGATCA+TGG | + | chr5_3:57277346-57277365 | None:intergenic | 25.0% |
| ! | ATTCAACTTAAAACGTATGA+GGG | + | chr5_3:57277481-57277500 | None:intergenic | 25.0% |
| ! | AATTCAACTTAAAACGTATG+AGG | + | chr5_3:57277482-57277501 | None:intergenic | 25.0% |
| !! | TGAATTTGTTCAATGTTTCA+TGG | - | chr5_3:57277496-57277515 | Msa0820120:CDS | 25.0% |
| ! | ATATCAACCTGCTTATTTAA+TGG | - | chr5_3:57277525-57277544 | Msa0820120:CDS | 25.0% |
| ! | AATAAAATAACGAAGCTAAC+AGG | + | chr5_3:57277610-57277629 | None:intergenic | 25.0% |
| ! | AATAAGATAACCACTTGTAT+GGG | + | chr5_3:57277705-57277724 | None:intergenic | 25.0% |
| ! | AAATAAGATAACCACTTGTA+TGG | + | chr5_3:57277706-57277725 | None:intergenic | 25.0% |
| ! | AATAATGTAGATTGTCAACA+GGG | + | chr5_3:57277978-57277997 | None:intergenic | 25.0% |
| ! | TAATAATGTAGATTGTCAAC+AGG | + | chr5_3:57277979-57277998 | None:intergenic | 25.0% |
| ! | CTTAGCAAGGTTAAATAAAA+TGG | - | chr5_3:57278225-57278244 | Msa0820120:intron | 25.0% |
| ! | ATCCTAAGTTATGAATCATA+TGG | + | chr5_3:57278381-57278400 | None:intergenic | 25.0% |
| !! | TTTGGTAACTATGTGATTAA+TGG | - | chr5_3:57278429-57278448 | Msa0820120:intron | 25.0% |
| ! | TTAATGGCAAATTAAGTGTA+TGG | - | chr5_3:57278445-57278464 | Msa0820120:CDS | 25.0% |
| ! | TACGAGTGATTTAAATGATA+TGG | - | chr5_3:57278552-57278571 | Msa0820120:intron | 25.0% |
| ! | AGATATTATATGCTTTCAGA+AGG | - | chr5_3:57278769-57278788 | Msa0820120:intron | 25.0% |
| !!! | TCCTTTTGAGGATTAATTAA+AGG | - | chr5_3:57278875-57278894 | Msa0820120:intron | 25.0% |
| ! | CAAAACATGACAGAATAAAT+TGG | + | chr5_3:57278940-57278959 | None:intergenic | 25.0% |
| !! | GTAAGCTCATTAGATTTTAT+TGG | - | chr5_3:57279163-57279182 | Msa0820120:intron | 25.0% |
| ! | TTAAATAAGAGACACTAAGA+AGG | + | chr5_3:57279470-57279489 | None:intergenic | 25.0% |
| ! | TACTTCATAGTACAATATGT+CGG | + | chr5_3:57279531-57279550 | None:intergenic | 25.0% |
| !!! | TTAATAATTGTTGATTCAGG+CGG | - | chr5_3:57279791-57279810 | Msa0820120:intron | 25.0% |
| ! | CTGTATTGTAAGTTACTTAT+GGG | - | chr5_3:57279917-57279936 | Msa0820120:intron | 25.0% |
| !! | CTTTTATCACAAGATATACA+AGG | - | chr5_3:57280200-57280219 | Msa0820120:intron | 25.0% |
| !! | TGATTGATTATTTTCTGATC+AGG | - | chr5_3:57280270-57280289 | Msa0820120:intron | 25.0% |
| !! | TGATTCAATTTGCTTTATAC+TGG | - | chr5_3:57280759-57280778 | Msa0820120:intron | 25.0% |
| !! | TACAGCAAATTCAGAATTTT+GGG | - | chr5_3:57280840-57280859 | Msa0820120:intron | 25.0% |
| ! | TATAATAACAGGACAATGTA+AGG | + | chr5_3:57281276-57281295 | None:intergenic | 25.0% |
| !!! | GTTATTTTATACCTAGGTTT+TGG | - | chr5_3:57281414-57281433 | Msa0820120:intron | 25.0% |
| ! | AAAAAAAAAAAACCCAGTAC+TGG | + | chr5_3:57281471-57281490 | None:intergenic | 25.0% |
| ! | GCCAGTAAAGATTTATAATT+AGG | - | chr5_3:57281568-57281587 | Msa0820120:intron | 25.0% |
| !!! | CAGTACATAAGATTTTTTGT+TGG | - | chr5_3:57281907-57281926 | Msa0820120:intron | 25.0% |
| ! | GACATTACTATGCTTTTATC+AGG | - | chr5_3:57273722-57273741 | Msa0820120:three_prime_UTR | 30.0% |
| TAACTATTCATCATAGACTG+AGG | - | chr5_3:57273884-57273903 | Msa0820120:three_prime_UTR | 30.0% | |
| ! | AGTATATTTGTTAGAGAGGT+TGG | - | chr5_3:57273959-57273978 | Msa0820120:three_prime_UTR | 30.0% |
| ! | GTATATTTGTTAGAGAGGTT+GGG | - | chr5_3:57273960-57273979 | Msa0820120:three_prime_UTR | 30.0% |
| !! | GTATTTTGAATATCATCTGC+AGG | - | chr5_3:57274180-57274199 | Msa0820120:exon | 30.0% |
| CATTCTGCTTGTATTAAATG+AGG | + | chr5_3:57274551-57274570 | None:intergenic | 30.0% | |
| TTTAATACAAGCAGAATGCT+TGG | - | chr5_3:57274553-57274572 | Msa0820120:intron | 30.0% | |
| TTAATACAAGCAGAATGCTT+GGG | - | chr5_3:57274554-57274573 | Msa0820120:intron | 30.0% | |
| TGTAAAAATTGTGTCATAGC+CGG | - | chr5_3:57274776-57274795 | Msa0820120:intron | 30.0% | |
| TCTAGTGGTTAACAATTGAA+AGG | - | chr5_3:57274818-57274837 | Msa0820120:CDS | 30.0% | |
| AACTATAACACAGGTACAAA+AGG | + | chr5_3:57274855-57274874 | None:intergenic | 30.0% | |
| ! | TTTTGTACCTGTGTTATAGT+TGG | - | chr5_3:57274854-57274873 | Msa0820120:CDS | 30.0% |
| TTTGTACCTGTGTTATAGTT+GGG | - | chr5_3:57274855-57274874 | Msa0820120:CDS | 30.0% | |
| !! | GTACAAATTTGATGATGAGA+GGG | - | chr5_3:57275039-57275058 | Msa0820120:CDS | 30.0% |
| !! | AAAAGGAGTGTTATTGAATC+CGG | + | chr5_3:57275233-57275252 | None:intergenic | 30.0% |
| ATATTCAAATGCTTACATGC+TGG | - | chr5_3:57275264-57275283 | Msa0820120:intron | 30.0% | |
| GGAAAAAGTAATATGCAATG+TGG | - | chr5_3:57275309-57275328 | Msa0820120:CDS | 30.0% | |
| AAGATATTGCTGAGCATTTA+AGG | - | chr5_3:57275338-57275357 | Msa0820120:intron | 30.0% | |
| AGATATTGCTGAGCATTTAA+GGG | - | chr5_3:57275339-57275358 | Msa0820120:intron | 30.0% | |
| ! | AATACAAATAGGTTCTGATC+TGG | + | chr5_3:57275407-57275426 | None:intergenic | 30.0% |
| GTTGCAATCAGAATACAAAT+AGG | + | chr5_3:57275418-57275437 | None:intergenic | 30.0% | |
| TTATAGCAACATACAACTCA+AGG | + | chr5_3:57275582-57275601 | None:intergenic | 30.0% | |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr5_3:57275602-57275621 | Msa0820120:CDS | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | + | chr5_3:57275609-57275628 | None:intergenic | 30.0% |
| !!! | TTTTTAGGAGTATCTTAGCA+AGG | - | chr5_3:57275674-57275693 | Msa0820120:intron | 30.0% |
| !!! | TTTTAGGAGTATCTTAGCAA+GGG | - | chr5_3:57275675-57275694 | Msa0820120:intron | 30.0% |
| ! | CAAAAGAAGATCAAAGGTAT+GGG | + | chr5_3:57275970-57275989 | None:intergenic | 30.0% |
| ACAAAAGAAGATCAAAGGTA+TGG | + | chr5_3:57275971-57275990 | None:intergenic | 30.0% | |
| ! | CTTCTTTTGTACTATAACTG+TGG | - | chr5_3:57275981-57276000 | Msa0820120:intron | 30.0% |
| TCACCTCTACACTATTATAA+AGG | - | chr5_3:57276301-57276320 | Msa0820120:intron | 30.0% | |
| ACACCTTTATAATAGTGTAG+AGG | + | chr5_3:57276307-57276326 | None:intergenic | 30.0% | |
| ! | ACAATACTCAATTCTAGGAA+AGG | + | chr5_3:57276339-57276358 | None:intergenic | 30.0% |
| CACAAACAATACTCAATTCT+AGG | + | chr5_3:57276344-57276363 | None:intergenic | 30.0% | |
| GATAACATATGATACTTAGG+TGG | - | chr5_3:57276468-57276487 | Msa0820120:CDS | 30.0% | |
| GATACCTTGAAAACGTTAAA+TGG | + | chr5_3:57276592-57276611 | None:intergenic | 30.0% | |
| TTTGCCAATTGAATTCCAAA+AGG | - | chr5_3:57276759-57276778 | Msa0820120:intron | 30.0% | |
| TTGCCAATTGAATTCCAAAA+GGG | - | chr5_3:57276760-57276779 | Msa0820120:intron | 30.0% | |
| !!! | GATTATCTAGTTTTTCCTTG+AGG | - | chr5_3:57276800-57276819 | Msa0820120:intron | 30.0% |
| TACATAACTCTTATCCTATG+AGG | + | chr5_3:57276912-57276931 | None:intergenic | 30.0% | |
| TAGTTGGAAGAAGAAAAAAC+AGG | - | chr5_3:57277046-57277065 | Msa0820120:intron | 30.0% | |
| ! | ACAGGTCTTATGAATCTTTA+TGG | - | chr5_3:57277064-57277083 | Msa0820120:intron | 30.0% |
| ATTGCTAATCTGTGATATGT+AGG | - | chr5_3:57277191-57277210 | Msa0820120:intron | 30.0% | |
| TTCAACTTAAAACGTATGAG+GGG | + | chr5_3:57277480-57277499 | None:intergenic | 30.0% | |
| ! | ATTGTTTAAGATCCTATGTG+AGG | - | chr5_3:57277727-57277746 | Msa0820120:CDS | 30.0% |
| ! | TTGTTTAAGATCCTATGTGA+GGG | - | chr5_3:57277728-57277747 | Msa0820120:CDS | 30.0% |
| CTCATTCTGATTTATATTGC+AGG | - | chr5_3:57277813-57277832 | Msa0820120:intron | 30.0% | |
| TTCTGATTTATATTGCAGGT+TGG | - | chr5_3:57277817-57277836 | Msa0820120:intron | 30.0% | |
| AAAACATTTGATGTCAACTC+AGG | + | chr5_3:57278142-57278161 | None:intergenic | 30.0% | |
| ! | TCAAATGTTTTTCCCTTTGA+TGG | - | chr5_3:57278151-57278170 | Msa0820120:intron | 30.0% |
| GAATATGCAAGAATACACTA+CGG | + | chr5_3:57278346-57278365 | None:intergenic | 30.0% | |
| AGCCATATGATTCATAACTT+AGG | - | chr5_3:57278376-57278395 | Msa0820120:intron | 30.0% | |
| ATGATTCATAACTTAGGATC+AGG | - | chr5_3:57278382-57278401 | Msa0820120:intron | 30.0% | |
| TAACCTAAAGTGCATTAACT+AGG | + | chr5_3:57278693-57278712 | None:intergenic | 30.0% | |
| GCCTTTAATTAATCCTCAAA+AGG | + | chr5_3:57278879-57278898 | None:intergenic | 30.0% | |
| ! | ATCACTGATTGATGTATTGT+AGG | - | chr5_3:57279085-57279104 | Msa0820120:intron | 30.0% |
| TATTGTAGGTTGTTCACTTT+CGG | - | chr5_3:57279099-57279118 | Msa0820120:intron | 30.0% | |
| ! | ATCTTCCTTTGGTTTATCTA+GGG | + | chr5_3:57279126-57279145 | None:intergenic | 30.0% |
| ! | CTCTTGTGTTATTGATATCT+AGG | - | chr5_3:57279243-57279262 | Msa0820120:intron | 30.0% |
| TGTTATTGATATCTAGGTCA+AGG | - | chr5_3:57279249-57279268 | Msa0820120:intron | 30.0% | |
| ! | TTTCACATATGATGATGTTG+TGG | - | chr5_3:57279274-57279293 | Msa0820120:intron | 30.0% |
| ! | GTTTTCAAACCTTGTAATTC+TGG | + | chr5_3:57279569-57279588 | None:intergenic | 30.0% |
| ! | ATAGTGACGTAATTTTCTTC+TGG | - | chr5_3:57279632-57279651 | Msa0820120:intron | 30.0% |
| CCATAAGTAACTTACAATAC+AGG | + | chr5_3:57279919-57279938 | None:intergenic | 30.0% | |
| CCTGTATTGTAAGTTACTTA+TGG | - | chr5_3:57279916-57279935 | Msa0820120:intron | 30.0% | |
| CATTGTCAGTAACATGTAAT+TGG | + | chr5_3:57280332-57280351 | None:intergenic | 30.0% | |
| GCAATTAACAATTGCACATT+TGG | - | chr5_3:57280351-57280370 | Msa0820120:intron | 30.0% | |
| ! | TTTCAATCTTTTCATTGGGA+GGG | + | chr5_3:57280432-57280451 | None:intergenic | 30.0% |
| ! | TTTTCAATCTTTTCATTGGG+AGG | + | chr5_3:57280433-57280452 | None:intergenic | 30.0% |
| TCTTTCTTTCTTCTTTGAGT+GGG | - | chr5_3:57280499-57280518 | Msa0820120:CDS | 30.0% | |
| ! | CATGTCGAATACATATTTTC+CGG | - | chr5_3:57280588-57280607 | Msa0820120:intron | 30.0% |
| CTTTAGTAAAATGATACACG+TGG | + | chr5_3:57280704-57280723 | None:intergenic | 30.0% | |
| ! | TTCAATTTGCTTTATACTGG+TGG | - | chr5_3:57280762-57280781 | Msa0820120:intron | 30.0% |
| ! | GTACAGCAAATTCAGAATTT+TGG | - | chr5_3:57280839-57280858 | Msa0820120:intron | 30.0% |
| ! | ACAGCAAATTCAGAATTTTG+GGG | - | chr5_3:57280841-57280860 | Msa0820120:intron | 30.0% |
| !!! | ATTACATTTTTTTTGGCCAG+TGG | - | chr5_3:57281091-57281110 | Msa0820120:intron | 30.0% |
| AGAAAAAAGCAAATTTCCAC+TGG | + | chr5_3:57281110-57281129 | None:intergenic | 30.0% | |
| ! | AGTTGTATCAAATCGTTTTC+AGG | - | chr5_3:57281164-57281183 | Msa0820120:intron | 30.0% |
| CTGTCAAAGGATATAATAAC+AGG | + | chr5_3:57281287-57281306 | None:intergenic | 30.0% | |
| ! | TTAGCAGCATATGATCTTTT+AGG | + | chr5_3:57281370-57281389 | None:intergenic | 30.0% |
| !! | TGGCAAGTTATTTTATACCT+AGG | - | chr5_3:57281408-57281427 | Msa0820120:intron | 30.0% |
| !!! | TTTTTGTTGTTGACAAACCT+TGG | - | chr5_3:57281488-57281507 | Msa0820120:intron | 30.0% |
| ATCTATGGGATTGTAAAAAC+AGG | - | chr5_3:57281646-57281665 | Msa0820120:intron | 30.0% | |
| AGTATCAGTCCATCAAAAAA+AGG | + | chr5_3:57281769-57281788 | None:intergenic | 30.0% | |
| GAGTATATACAGAGTATAGT+TGG | - | chr5_3:57281936-57281955 | Msa0820120:intron | 30.0% | |
| ATATACAGAGTATAGTTGGT+TGG | - | chr5_3:57281940-57281959 | Msa0820120:intron | 30.0% | |
| ! | ATTTTATGCCAACGAGTATA+TGG | + | chr5_3:57282099-57282118 | None:intergenic | 30.0% |
| AACCACTAGGTTGTAACAAT+GGG | + | chr5_3:57274287-57274306 | None:intergenic | 35.0% | |
| !! | GAAGTGGAGTGTTTTTCTAA+TGG | - | chr5_3:57274502-57274521 | Msa0820120:intron | 35.0% |
| TGTATTAAATGAGGTGAGGA+AGG | + | chr5_3:57274542-57274561 | None:intergenic | 35.0% | |
| TGCTTGTATTAAATGAGGTG+AGG | + | chr5_3:57274546-57274565 | None:intergenic | 35.0% | |
| TTACATGTGCTTTGTCATAG+TGG | - | chr5_3:57274683-57274702 | Msa0820120:intron | 35.0% | |
| !! | GGTACAAATTTGATGATGAG+AGG | - | chr5_3:57275038-57275057 | Msa0820120:CDS | 35.0% |
| TGACAAAAGAAGACCCTAAA+CGG | - | chr5_3:57275062-57275081 | Msa0820120:CDS | 35.0% | |
| CAAGTACTCAAATGCTCATA+GGG | + | chr5_3:57275157-57275176 | None:intergenic | 35.0% | |
| ACAAGTACTCAAATGCTCAT+AGG | + | chr5_3:57275158-57275177 | None:intergenic | 35.0% | |
| !! | AAAGGAGTGTTATTGAATCC+GGG | + | chr5_3:57275232-57275251 | None:intergenic | 35.0% |
| !! | GATCTGGCTTGACTAATTTT+GGG | + | chr5_3:57275391-57275410 | None:intergenic | 35.0% |
| !! | TGATCTGGCTTGACTAATTT+TGG | + | chr5_3:57275392-57275411 | None:intergenic | 35.0% |
| !!! | ACACCCACTAGTTTTTATGT+GGG | - | chr5_3:57275516-57275535 | Msa0820120:intron | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | + | chr5_3:57275748-57275767 | None:intergenic | 35.0% | |
| TGTATGTTAGCAACTCCTAT+AGG | - | chr5_3:57275626-57275645 | Msa0820120:intron | 35.0% | |
| GTATTCTAGCAAATGCCTAT+AGG | + | chr5_3:57275644-57275663 | None:intergenic | 35.0% | |
| CAAGGGATAACACTAAAAAG+TGG | - | chr5_3:57275692-57275711 | Msa0820120:intron | 35.0% | |
| ! | TTTTAGCAAGCTACACCTTA+GGG | + | chr5_3:57275727-57275746 | None:intergenic | 35.0% |
| ACTCCCACATAAAAACTAGT+GGG | - | chr5_3:57275748-57275767 | Msa0820120:intron | 35.0% | |
| !!! | ACACCCACTAGTTTTTATGT+GGG | + | chr5_3:57275516-57275535 | None:intergenic | 35.0% |
| TCATGCAGAGTTCAAATTTG+CGG | + | chr5_3:57275872-57275891 | None:intergenic | 35.0% | |
| ! | TCAAAGGTATGGGTAAACAT+TGG | + | chr5_3:57275960-57275979 | None:intergenic | 35.0% |
| !! | ACTATAACTGTGGTTTGTTC+TGG | - | chr5_3:57275991-57276010 | Msa0820120:intron | 35.0% |
| !! | ATGACCACTGATTTCTACAA+TGG | - | chr5_3:57276209-57276228 | Msa0820120:CDS | 35.0% |
| !! | TGACCACTGATTTCTACAAT+GGG | - | chr5_3:57276210-57276229 | Msa0820120:CDS | 35.0% |
| AATCCCATTGTAGAAATCAG+TGG | + | chr5_3:57276216-57276235 | None:intergenic | 35.0% | |
| TTTCTACAATGGGATTATGC+AGG | - | chr5_3:57276220-57276239 | Msa0820120:CDS | 35.0% | |
| AGAGCACAAAAAGAAAGAGA+AGG | - | chr5_3:57276271-57276290 | Msa0820120:intron | 35.0% | |
| ! | GACACCATTTAACGTTTTCA+AGG | - | chr5_3:57276585-57276604 | Msa0820120:intron | 35.0% |
| ! | TTTTCATCTACACTGCAAGA+GGG | + | chr5_3:57276627-57276646 | None:intergenic | 35.0% |
| TTGGCAAATGTATTCGCTAA+GGG | + | chr5_3:57276747-57276766 | None:intergenic | 35.0% | |
| ATTGGCAAATGTATTCGCTA+AGG | + | chr5_3:57276748-57276767 | None:intergenic | 35.0% | |
| GGATAAGAGTTATGTAAGTC+AGG | - | chr5_3:57276916-57276935 | Msa0820120:CDS | 35.0% | |
| AATCTGTGATATGTAGGAAG+AGG | - | chr5_3:57277197-57277216 | Msa0820120:intron | 35.0% | |
| ACCATACATATCGTCCTAAT+CGG | - | chr5_3:57277283-57277302 | Msa0820120:intron | 35.0% | |
| AAGCAAGATCATGGAACTTA+CGG | + | chr5_3:57277337-57277356 | None:intergenic | 35.0% | |
| AAAAGCCAACAGACATGAAA+AGG | + | chr5_3:57277413-57277432 | None:intergenic | 35.0% | |
| !!! | TTTCATGTCTGTTGGCTTTT+AGG | - | chr5_3:57277413-57277432 | Msa0820120:intron | 35.0% |
| TCAACTTAAAACGTATGAGG+GGG | + | chr5_3:57277479-57277498 | None:intergenic | 35.0% | |
| AAATCAAATGAAACCAGCCA+CGG | + | chr5_3:57277554-57277573 | None:intergenic | 35.0% | |
| ATTGAGAGAGATATCGAACA+AGG | - | chr5_3:57277843-57277862 | Msa0820120:intron | 35.0% | |
| ATATCATCCTTTGTCTTCTC+AGG | + | chr5_3:57278028-57278047 | None:intergenic | 35.0% | |
| GTTATATGATCCTGAGAAAG+AGG | - | chr5_3:57278063-57278082 | Msa0820120:intron | 35.0% | |
| ACATATATTGGGGTAGAAGA+TGG | - | chr5_3:57278115-57278134 | Msa0820120:intron | 35.0% | |
| AACCATCAGAAATCTTAGCA+AGG | - | chr5_3:57278212-57278231 | Msa0820120:intron | 35.0% | |
| AACCTTGCTAAGATTTCTGA+TGG | + | chr5_3:57278217-57278236 | None:intergenic | 35.0% | |
| GCAAGGTTAAATAAAATGGC+TGG | - | chr5_3:57278229-57278248 | Msa0820120:intron | 35.0% | |
| TATGATCCTGAAGAAGAGAT+TGG | - | chr5_3:57278253-57278272 | Msa0820120:intron | 35.0% | |
| TAAAGTCCAATCTCTTCTTC+AGG | + | chr5_3:57278262-57278281 | None:intergenic | 35.0% | |
| AGAAGAGATTGGACTTTATG+AGG | - | chr5_3:57278264-57278283 | Msa0820120:intron | 35.0% | |
| GTTATGAATCATATGGCTTC+TGG | + | chr5_3:57278374-57278393 | None:intergenic | 35.0% | |
| CTGAGGATGGCATTATAAAA+AGG | + | chr5_3:57278521-57278540 | None:intergenic | 35.0% | |
| ! | CTTTTTATAATGCCATCCTC+AGG | - | chr5_3:57278519-57278538 | Msa0820120:CDS | 35.0% |
| AACTGTGCCTATATTTGTGT+AGG | - | chr5_3:57278587-57278606 | Msa0820120:intron | 35.0% | |
| CTACCTAGTTAATGCACTTT+AGG | - | chr5_3:57278687-57278706 | Msa0820120:intron | 35.0% | |
| TGCACATATTCCAAGTAAGA+AGG | + | chr5_3:57278839-57278858 | None:intergenic | 35.0% | |
| ATCCTCAAAAGGAAAATACC+TGG | + | chr5_3:57278868-57278887 | None:intergenic | 35.0% | |
| ! | CATCTTCCTTTGGTTTATCT+AGG | + | chr5_3:57279127-57279146 | None:intergenic | 35.0% |
| !!! | CCTTCTTTTTAAGATCCTCA+AGG | + | chr5_3:57279863-57279882 | None:intergenic | 35.0% |
| CCTTGAGGATCTTAAAAAGA+AGG | - | chr5_3:57279860-57279879 | Msa0820120:intron | 35.0% | |
| !!! | CAATTTTGGCTTGGTTTTAC+AGG | - | chr5_3:57280134-57280153 | Msa0820120:intron | 35.0% |
| ATCACAAGATATACAAGGTG+TGG | - | chr5_3:57280205-57280224 | Msa0820120:intron | 35.0% | |
| TCAAGAACGCTAATAAACCT+AGG | + | chr5_3:57280253-57280272 | None:intergenic | 35.0% | |
| ! | TATTTTCTGATCAGGTTACG+AGG | - | chr5_3:57280278-57280297 | Msa0820120:intron | 35.0% |
| ! | ATTTTCTGATCAGGTTACGA+GGG | - | chr5_3:57280279-57280298 | Msa0820120:intron | 35.0% |
| GAATGACCATTAGTTGTATG+AGG | - | chr5_3:57280301-57280320 | Msa0820120:intron | 35.0% | |
| CTCTTTCTTTCTTCTTTGAG+TGG | - | chr5_3:57280498-57280517 | Msa0820120:CDS | 35.0% | |
| CTTTCTTTCTTCTTTGAGTG+GGG | - | chr5_3:57280500-57280519 | Msa0820120:CDS | 35.0% | |
| CCAGAAGAAGAGAAAAATCT+CGG | - | chr5_3:57280660-57280679 | Msa0820120:intron | 35.0% | |
| !! | TTTTGGGGAACCTTTTTTCT+TGG | - | chr5_3:57280856-57280875 | Msa0820120:intron | 35.0% |
| TCGTGTATGACCAAGAAAAA+AGG | + | chr5_3:57280869-57280888 | None:intergenic | 35.0% | |
| TCCATCTTTGCAAGTTCTAT+GGG | - | chr5_3:57280969-57280988 | Msa0820120:intron | 35.0% | |
| GCAAGTTCTATGGGTATATT+AGG | - | chr5_3:57280978-57280997 | Msa0820120:intron | 35.0% | |
| ! | TTTTAGTGATCACTGCTTCA+TGG | - | chr5_3:57281026-57281045 | Msa0820120:intron | 35.0% |
| AAGATCATATGCTGCTAATC+AGG | - | chr5_3:57281372-57281391 | Msa0820120:intron | 35.0% | |
| AATCAGGTTAGTAACTTTGC+TGG | - | chr5_3:57281388-57281407 | Msa0820120:intron | 35.0% | |
| ACAATCAAAGACCAAAACCT+AGG | + | chr5_3:57281428-57281447 | None:intergenic | 35.0% | |
| !! | GGTTTTGGTCTTTGATTGTT+TGG | - | chr5_3:57281429-57281448 | Msa0820120:intron | 35.0% |
| ! | TTTGGTCTTTGATTGTTTGG+TGG | - | chr5_3:57281432-57281451 | Msa0820120:intron | 35.0% |
| ! | TGAAAAGGTGTAACAAACCA+AGG | + | chr5_3:57281508-57281527 | None:intergenic | 35.0% |
| ! | GATGAGCTATCATTTTGCAT+GGG | - | chr5_3:57281602-57281621 | Msa0820120:intron | 35.0% |
| TCAGCGTTCTTCTATATCTA+TGG | - | chr5_3:57281631-57281650 | Msa0820120:intron | 35.0% | |
| CAGCGTTCTTCTATATCTAT+GGG | - | chr5_3:57281632-57281651 | Msa0820120:intron | 35.0% | |
| GTTCATGTAGTGTCTTGTAA+AGG | - | chr5_3:57282054-57282073 | Msa0820120:CDS | 35.0% | |
| AAATATTCTGCAGCACCATT+TGG | - | chr5_3:57282115-57282134 | Msa0820120:CDS | 35.0% | |
| CAACATATTTGACGAGAACC+AGG | - | chr5_3:57273817-57273836 | Msa0820120:three_prime_UTR | 40.0% | |
| ACCACTAGGTTGTAACAATG+GGG | + | chr5_3:57274286-57274305 | None:intergenic | 40.0% | |
| CAACCACTAGGTTGTAACAA+TGG | + | chr5_3:57274288-57274307 | None:intergenic | 40.0% | |
| CATTGTTACAACCTAGTGGT+TGG | - | chr5_3:57274286-57274305 | Msa0820120:intron | 40.0% | |
| !! | GCTGTGAGGATGTTTTAAGT+GGG | - | chr5_3:57274319-57274338 | Msa0820120:intron | 40.0% |
| !! | GTGGAGTGTTTTTCTAATGG+TGG | - | chr5_3:57274505-57274524 | Msa0820120:intron | 40.0% |
| TTGGATGCTTCGTTTCTAAG+TGG | - | chr5_3:57274585-57274604 | Msa0820120:intron | 40.0% | |
| TGGATGCTTCGTTTCTAAGT+GGG | - | chr5_3:57274586-57274605 | Msa0820120:intron | 40.0% | |
| ACACACACACACACACATTA+AGG | + | chr5_3:57274631-57274650 | None:intergenic | 40.0% | |
| !! | ATAGCCGGTACTTTGAAATG+AGG | - | chr5_3:57274791-57274810 | Msa0820120:intron | 40.0% |
| ACAGCCTCATTTCAAAGTAC+CGG | + | chr5_3:57274798-57274817 | None:intergenic | 40.0% | |
| TTGAAATGAGGCTGTTCTAG+TGG | - | chr5_3:57274803-57274822 | Msa0820120:intron | 40.0% | |
| GCATAACCCAACTATAACAC+AGG | + | chr5_3:57274864-57274883 | None:intergenic | 40.0% | |
| CTACTGAACTCTTAACTGCA+TGG | - | chr5_3:57274989-57275008 | Msa0820120:intron | 40.0% | |
| GACAAAAGAAGACCCTAAAC+GGG | - | chr5_3:57275063-57275082 | Msa0820120:CDS | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | - | chr5_3:57275515-57275534 | Msa0820120:intron | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | + | chr5_3:57275747-57275766 | None:intergenic | 40.0% | |
| AAGTGGTTAAATGCACCCTA+AGG | - | chr5_3:57275709-57275728 | Msa0820120:intron | 40.0% | |
| !! | GTTTTAGCAAGCTACACCTT+AGG | + | chr5_3:57275728-57275747 | None:intergenic | 40.0% |
| CACTCCCACATAAAAACTAG+TGG | - | chr5_3:57275747-57275766 | Msa0820120:intron | 40.0% | |
| !!! | CACACCCACTAGTTTTTATG+TGG | + | chr5_3:57275515-57275534 | None:intergenic | 40.0% |
| ACACACACACACACATATTC+TGG | - | chr5_3:57275811-57275830 | Msa0820120:intron | 40.0% | |
| AGTTCAAATTTGCGGCAAAG+CGG | + | chr5_3:57275864-57275883 | None:intergenic | 40.0% | |
| TGTACCAATGTCATCAATCG+CGG | - | chr5_3:57276031-57276050 | Msa0820120:intron | 40.0% | |
| CCACTGTGATATATCACTGA+CGG | - | chr5_3:57276180-57276199 | Msa0820120:CDS | 40.0% | |
| GGAGAGGTTAAAGAAAGAAC+AGG | - | chr5_3:57276241-57276260 | Msa0820120:intron | 40.0% | |
| GCACAAAAAGAAAGAGAAGG+CGG | - | chr5_3:57276274-57276293 | Msa0820120:intron | 40.0% | |
| GAAGATCTTGGAGAACAGAT+TGG | - | chr5_3:57276499-57276518 | Msa0820120:intron | 40.0% | |
| TCTTGGAGAACAGATTGGAA+AGG | - | chr5_3:57276504-57276523 | Msa0820120:intron | 40.0% | |
| TTGTAGACCATGACAAAGTG+CGG | - | chr5_3:57276542-57276561 | Msa0820120:intron | 40.0% | |
| !! | ATGGTGTCTGCTTTTGTACA+CGG | + | chr5_3:57276573-57276592 | None:intergenic | 40.0% |
| TTTCATCTACACTGCAAGAG+GGG | + | chr5_3:57276626-57276645 | None:intergenic | 40.0% | |
| ! | CTTTTCATCTACACTGCAAG+AGG | + | chr5_3:57276628-57276647 | None:intergenic | 40.0% |
| !!! | CGTCCCTTTTGGAATTCAAT+TGG | + | chr5_3:57276766-57276785 | None:intergenic | 40.0% |
| GTGTCAGTCTATCTCTAACT+TGG | - | chr5_3:57276825-57276844 | Msa0820120:intron | 40.0% | |
| ! | TGGTTCTATCATGTTGCGTT+TGG | - | chr5_3:57276845-57276864 | Msa0820120:intron | 40.0% |
| GAAGAGGTTGCTAAAGAGTT+CGG | - | chr5_3:57277213-57277232 | Msa0820120:intron | 40.0% | |
| ATTTGTGTCAATGGCCGATT+AGG | + | chr5_3:57277300-57277319 | None:intergenic | 40.0% | |
| GCTTCCTCAATTTGTGTCAA+TGG | + | chr5_3:57277309-57277328 | None:intergenic | 40.0% | |
| ! | TACGACCTTTTCATGTCTGT+TGG | - | chr5_3:57277405-57277424 | Msa0820120:intron | 40.0% |
| !!! | GTTGGCTTTTAGGCAAATGT+TGG | - | chr5_3:57277423-57277442 | Msa0820120:intron | 40.0% |
| ACGGCAACCATTAAATAAGC+AGG | + | chr5_3:57277535-57277554 | None:intergenic | 40.0% | |
| TGCTTATTTAATGGTTGCCG+TGG | - | chr5_3:57277534-57277553 | Msa0820120:CDS | 40.0% | |
| ACAGGCATAGAAGTAACTGT+TGG | + | chr5_3:57277592-57277611 | None:intergenic | 40.0% | |
| AACAATGTAGCCCATACAAG+TGG | - | chr5_3:57277692-57277711 | Msa0820120:CDS | 40.0% | |
| AAGATTGAACACCCTCACAT+AGG | + | chr5_3:57277742-57277761 | None:intergenic | 40.0% | |
| CCAACATAACTGCCATCAAA+GGG | + | chr5_3:57278166-57278185 | None:intergenic | 40.0% | |
| AGACTCTTTGTGAACAACAC+TGG | - | chr5_3:57278187-57278206 | Msa0820120:intron | 40.0% | |
| GAGATTGGACTTTATGAGGT+TGG | - | chr5_3:57278268-57278287 | Msa0820120:intron | 40.0% | |
| CAGTCATGGTTTCAGTTGTT+TGG | - | chr5_3:57278411-57278430 | Msa0820120:intron | 40.0% | |
| TTCTTGCATGACTTACCAGA+AGG | - | chr5_3:57278488-57278507 | Msa0820120:CDS | 40.0% | |
| TCTTGCATGACTTACCAGAA+GGG | - | chr5_3:57278489-57278508 | Msa0820120:CDS | 40.0% | |
| ATGACTTACCAGAAGGGAAA+TGG | - | chr5_3:57278495-57278514 | Msa0820120:CDS | 40.0% | |
| TAAAAAGGCCATTTCCCTTC+TGG | + | chr5_3:57278506-57278525 | None:intergenic | 40.0% | |
| TAGAGATCAAAACCTGAGGA+TGG | + | chr5_3:57278534-57278553 | None:intergenic | 40.0% | |
| ATTAACATTTCGAGCAAGCC+AGG | - | chr5_3:57278656-57278675 | Msa0820120:intron | 40.0% | |
| AACTAGGTAGATACCATACC+TGG | + | chr5_3:57278677-57278696 | None:intergenic | 40.0% | |
| CATGCATTAGCACAAACAAG+AGG | + | chr5_3:57278984-57279003 | None:intergenic | 40.0% | |
| AAGCCTTTGCAAGTTTCACT+GGG | - | chr5_3:57279028-57279047 | Msa0820120:intron | 40.0% | |
| ATACCCAGTGAAACTTGCAA+AGG | + | chr5_3:57279034-57279053 | None:intergenic | 40.0% | |
| TCTAATGAGCTTACATCTCC+AGG | + | chr5_3:57279157-57279176 | None:intergenic | 40.0% | |
| TGTATGGTGCTTAGGATAAC+AGG | - | chr5_3:57279218-57279237 | Msa0820120:intron | 40.0% | |
| AGTAGCTGAACAACTTGGTT+TGG | - | chr5_3:57279301-57279320 | Msa0820120:intron | 40.0% | |
| TTGAGAATAGCAGTTGTGTG+GGG | + | chr5_3:57279351-57279370 | None:intergenic | 40.0% | |
| GTTGAGAATAGCAGTTGTGT+GGG | + | chr5_3:57279352-57279371 | None:intergenic | 40.0% | |
| TGTTGAGAATAGCAGTTGTG+TGG | + | chr5_3:57279353-57279372 | None:intergenic | 40.0% | |
| TATGCTCGTTCACTACAATC+AGG | - | chr5_3:57279421-57279440 | Msa0820120:intron | 40.0% | |
| AACCTTGTAATTCTGGCAGA+GGG | + | chr5_3:57279562-57279581 | None:intergenic | 40.0% | |
| AAACCTTGTAATTCTGGCAG+AGG | + | chr5_3:57279563-57279582 | None:intergenic | 40.0% | |
| CACTATACTCACTTCATCCT+TGG | + | chr5_3:57279618-57279637 | None:intergenic | 40.0% | |
| TTCCTTAGCTCAAGTCATGA+AGG | + | chr5_3:57279971-57279990 | None:intergenic | 40.0% | |
| ! | ATCTGATGCTCGCTCAATTT+TGG | - | chr5_3:57280120-57280139 | Msa0820120:intron | 40.0% |
| TAAACCTAGGTGCAGATGAT+TGG | + | chr5_3:57280240-57280259 | None:intergenic | 40.0% | |
| GAGTGTCCTCATACAACTAA+TGG | + | chr5_3:57280310-57280329 | None:intergenic | 40.0% | |
| AAAACCTGCACAGCATAAAC+AGG | + | chr5_3:57280409-57280428 | None:intergenic | 40.0% | |
| ! | CCGAGATTTTTCTCTTCTTC+TGG | + | chr5_3:57280663-57280682 | None:intergenic | 40.0% |
| AGACACTACTCAGAACCAAA+TGG | - | chr5_3:57280722-57280741 | Msa0820120:intron | 40.0% | |
| CATACACGAATGTGAGACTT+TGG | - | chr5_3:57280880-57280899 | Msa0820120:intron | 40.0% | |
| CTCCATCTTTGCAAGTTCTA+TGG | - | chr5_3:57280968-57280987 | Msa0820120:intron | 40.0% | |
| ACCCATAGAACTTGCAAAGA+TGG | + | chr5_3:57280973-57280992 | None:intergenic | 40.0% | |
| CTGCTTCATGGAGTAAAGAT+TGG | - | chr5_3:57281038-57281057 | Msa0820120:intron | 40.0% | |
| ATACAACTTCAGAGTCCTCA+AGG | + | chr5_3:57281152-57281171 | None:intergenic | 40.0% | |
| ATACGTCTCTTCTCTGTCAA+AGG | + | chr5_3:57281300-57281319 | None:intergenic | 40.0% | |
| TGACAGAGAAGAGACGTATA+TGG | - | chr5_3:57281301-57281320 | Msa0820120:intron | 40.0% | |
| TTATCCACTCTTTCCAGTAC+TGG | - | chr5_3:57281455-57281474 | Msa0820120:intron | 40.0% | |
| TATCCACTCTTTCCAGTACT+GGG | - | chr5_3:57281456-57281475 | Msa0820120:intron | 40.0% | |
| ! | GGATGAGCTATCATTTTGCA+TGG | - | chr5_3:57281601-57281620 | Msa0820120:intron | 40.0% |
| TGGAAGTAGCAAAAAGCTCA+AGG | + | chr5_3:57281828-57281847 | None:intergenic | 40.0% | |
| !! | GAGCTTTTTGCTACTTCCAT+TGG | - | chr5_3:57281829-57281848 | Msa0820120:intron | 40.0% |
| ! | TTGCTACTTCCATTGGTCTA+TGG | - | chr5_3:57281836-57281855 | Msa0820120:intron | 40.0% |
| GAACAACTTCCATAGACCAA+TGG | + | chr5_3:57281848-57281867 | None:intergenic | 40.0% | |
| AAAATCTGAAAGCGACCAAG+AGG | + | chr5_3:57281976-57281995 | None:intergenic | 40.0% | |
| TAGCAGTGTTAATTCTAGCG+AGG | - | chr5_3:57282010-57282029 | Msa0820120:intron | 40.0% | |
| AGCAGTGTTAATTCTAGCGA+GGG | - | chr5_3:57282011-57282030 | Msa0820120:intron | 40.0% | |
| TTATGCCAACGAGTATATGG+AGG | + | chr5_3:57282096-57282115 | None:intergenic | 40.0% | |
| TACCACTGATCAGAGAGAGT+CGG | + | chr5_3:57273748-57273767 | None:intergenic | 45.0% | |
| TGAATGCAGTACATGACTCC+TGG | + | chr5_3:57273838-57273857 | None:intergenic | 45.0% | |
| TCCCCATTGTTACAACCTAG+TGG | - | chr5_3:57274282-57274301 | Msa0820120:intron | 45.0% | |
| GTTACAACCTAGTGGTTGGT+TGG | - | chr5_3:57274290-57274309 | Msa0820120:intron | 45.0% | |
| !! | GGCTGTGAGGATGTTTTAAG+TGG | - | chr5_3:57274318-57274337 | Msa0820120:intron | 45.0% |
| ATGTAGTGCCAGTGCTACAT+AGG | + | chr5_3:57274719-57274738 | None:intergenic | 45.0% | |
| TCCGAATGTTCGACACATGT+CGG | - | chr5_3:57274751-57274770 | Msa0820120:intron | 45.0% | |
| CAGTTACCACAGACAAATCC+CGG | - | chr5_3:57275211-57275230 | Msa0820120:intron | 45.0% | |
| TTGAATCCGGGATTTGTCTG+TGG | + | chr5_3:57275220-57275239 | None:intergenic | 45.0% | |
| GCTGGTGTATATACGTGAAG+CGG | - | chr5_3:57275282-57275301 | Msa0820120:intron | 45.0% | |
| GTATATACGTGAAGCGGACA+AGG | - | chr5_3:57275288-57275307 | Msa0820120:intron | 45.0% | |
| GGCAAGTATGATTGTTCTCG+CGG | - | chr5_3:57275832-57275851 | Msa0820120:intron | 45.0% | |
| GCAAGTATGATTGTTCTCGC+GGG | - | chr5_3:57275833-57275852 | Msa0820120:intron | 45.0% | |
| TCGCGGATCGCAGAAAATAA+TGG | - | chr5_3:57276048-57276067 | Msa0820120:intron | 45.0% | |
| TGCCAGATAGCAAGCTATGA+CGG | + | chr5_3:57276110-57276129 | None:intergenic | 45.0% | |
| CCGTCAGTGATATATCACAG+TGG | + | chr5_3:57276183-57276202 | None:intergenic | 45.0% | |
| ACAATGGGATTATGCAGGAG+AGG | - | chr5_3:57276225-57276244 | Msa0820120:CDS | 45.0% | |
| CAAAAAGAAAGAGAAGGCGG+AGG | - | chr5_3:57276277-57276296 | Msa0820120:intron | 45.0% | |
| ! | TGACAACTACACGTCCCTTT+TGG | + | chr5_3:57276777-57276796 | None:intergenic | 45.0% |
| GATAGACTGACACTTCCTCA+AGG | + | chr5_3:57276818-57276837 | None:intergenic | 45.0% | |
| TTGGCTGTGTGCAATGCTAA+TGG | - | chr5_3:57276864-57276883 | Msa0820120:intron | 45.0% | |
| TTACCACAGAGTAGCCTCAT+AGG | - | chr5_3:57276895-57276914 | Msa0820120:intron | 45.0% | |
| TATCCTATGAGGCTACTCTG+TGG | + | chr5_3:57276901-57276920 | None:intergenic | 45.0% | |
| !! | CAAAAGCGCTGGAATTGTAC+AGG | + | chr5_3:57277243-57277262 | None:intergenic | 45.0% |
| ! | CTGTACAATTCCAGCGCTTT+TGG | - | chr5_3:57277241-57277260 | Msa0820120:intron | 45.0% |
| !!! | AATTCCAGCGCTTTTGGCTT+TGG | - | chr5_3:57277247-57277266 | Msa0820120:intron | 45.0% |
| !!! | ATTCCAGCGCTTTTGGCTTT+GGG | - | chr5_3:57277248-57277267 | Msa0820120:intron | 45.0% |
| GCCGATTAGGACGATATGTA+TGG | + | chr5_3:57277287-57277306 | None:intergenic | 45.0% | |
| TCGGCCATTGACACAAATTG+AGG | - | chr5_3:57277302-57277321 | Msa0820120:intron | 45.0% | |
| TATTTAATGGTTGCCGTGGC+TGG | - | chr5_3:57277538-57277557 | Msa0820120:CDS | 45.0% | |
| !!! | TTGTTTTTGGAAGTGGAGCG+TGG | - | chr5_3:57277886-57277905 | Msa0820120:CDS | 45.0% |
| ATTGTCAACAGGGCTGTGTT+TGG | + | chr5_3:57277968-57277987 | None:intergenic | 45.0% | |
| TCATCCTTTGTCTTCTCAGG+TGG | + | chr5_3:57278025-57278044 | None:intergenic | 45.0% | |
| ATCCTGAGAAAGAGGAGCTA+CGG | - | chr5_3:57278071-57278090 | Msa0820120:intron | 45.0% | |
| ! | CCCTTTGATGGCAGTTATGT+TGG | - | chr5_3:57278163-57278182 | Msa0820120:intron | 45.0% |
| GCCAACATAACTGCCATCAA+AGG | + | chr5_3:57278167-57278186 | None:intergenic | 45.0% | |
| CTCGTAGAGATCAAAACCTG+AGG | + | chr5_3:57278538-57278557 | None:intergenic | 45.0% | |
| CCATCTTCAAGCTGCATTCA+CGG | + | chr5_3:57278749-57278768 | None:intergenic | 45.0% | |
| ! | AAGAAGGCACATCAGGATAG+CGG | + | chr5_3:57278823-57278842 | None:intergenic | 45.0% |
| TCCTGATGTGCCTTCTTACT+TGG | - | chr5_3:57278826-57278845 | Msa0820120:intron | 45.0% | |
| ! | TCCAAGTAAGAAGGCACATC+AGG | + | chr5_3:57278830-57278849 | None:intergenic | 45.0% |
| ! | CGCCAGGTATTTTCCTTTTG+AGG | - | chr5_3:57278863-57278882 | Msa0820120:intron | 45.0% |
| GCATTAGCACAAACAAGAGG+AGG | + | chr5_3:57278981-57279000 | None:intergenic | 45.0% | |
| TGAAACTTGCAAAGGCTTGC+TGG | + | chr5_3:57279026-57279045 | None:intergenic | 45.0% | |
| CAAGCCTTTGCAAGTTTCAC+TGG | - | chr5_3:57279027-57279046 | Msa0820120:intron | 45.0% | |
| TCGGTCCCTAGATAAACCAA+AGG | - | chr5_3:57279118-57279137 | Msa0820120:intron | 45.0% | |
| AGGCAGAAGTCATCTTCCTT+TGG | + | chr5_3:57279137-57279156 | None:intergenic | 45.0% | |
| AAAGGAAGATGACTTCTGCC+TGG | - | chr5_3:57279136-57279155 | Msa0820120:intron | 45.0% | |
| TAAGCACCATACACGTGTGT+GGG | + | chr5_3:57279211-57279230 | None:intergenic | 45.0% | |
| GAGAGAGTAGCTGAACAACT+TGG | - | chr5_3:57279296-57279315 | Msa0820120:intron | 45.0% | |
| ! | TACTTGATAGGCTGGGGTTT+TGG | + | chr5_3:57279377-57279396 | None:intergenic | 45.0% |
| CAGATAAATGTTCCACCCCT+CGG | + | chr5_3:57279400-57279419 | None:intergenic | 45.0% | |
| ATCCCTCTGCCAGAATTACA+AGG | - | chr5_3:57279557-57279576 | Msa0820120:intron | 45.0% | |
| TGCGTTTCATCATGCTACCA+AGG | - | chr5_3:57279598-57279617 | Msa0820120:intron | 45.0% | |
| CTCCTACAGTGCTTTGCTTT+GGG | + | chr5_3:57279836-57279855 | None:intergenic | 45.0% | |
| TCTCCTACAGTGCTTTGCTT+TGG | + | chr5_3:57279837-57279856 | None:intergenic | 45.0% | |
| GTAATGCAACTGCACACTTC+TGG | - | chr5_3:57279945-57279964 | Msa0820120:intron | 45.0% | |
| !!! | ATGCTCGCTCAATTTTGGCT+TGG | - | chr5_3:57280125-57280144 | Msa0820120:intron | 45.0% |
| AGCAACCTAAGCTCAGTATC+AGG | + | chr5_3:57280174-57280193 | None:intergenic | 45.0% | |
| CATTCCAATCATCTGCACCT+AGG | - | chr5_3:57280233-57280252 | Msa0820120:intron | 45.0% | |
| ATGTCCTGTTTATGCTGTGC+AGG | - | chr5_3:57280402-57280421 | Msa0820120:intron | 45.0% | |
| GAAAGAGATTGCTACCTCCT+CGG | + | chr5_3:57280485-57280504 | None:intergenic | 45.0% | |
| TTTCTTCTTTGAGTGGGGCT+GGG | - | chr5_3:57280505-57280524 | Msa0820120:CDS | 45.0% | |
| !! | ACGTGGATTAGACGATCATG+GGG | + | chr5_3:57280687-57280706 | None:intergenic | 45.0% |
| !! | CACGTGGATTAGACGATCAT+GGG | + | chr5_3:57280688-57280707 | None:intergenic | 45.0% |
| !! | ACACGTGGATTAGACGATCA+TGG | + | chr5_3:57280689-57280708 | None:intergenic | 45.0% |
| TCCAGACGATGAGTTTGTCA+AGG | - | chr5_3:57280940-57280959 | Msa0820120:intron | 45.0% | |
| ACCTTGACAAACTCATCGTC+TGG | + | chr5_3:57280944-57280963 | None:intergenic | 45.0% | |
| AAGAGACGTATATGGTGCCT+GGG | - | chr5_3:57281309-57281328 | Msa0820120:intron | 45.0% | |
| ! | AAACCCAGTACTGGAAAGAG+TGG | + | chr5_3:57281462-57281481 | None:intergenic | 45.0% |
| AAAACAGGCAAAGCAGCGAA+AGG | - | chr5_3:57281661-57281680 | Msa0820120:intron | 45.0% | |
| GCGAAAGGCTAATTATGCGT+AGG | - | chr5_3:57281676-57281695 | Msa0820120:intron | 45.0% | |
| !!! | ACTTTTGAGATCAGTGACCG+AGG | - | chr5_3:57281702-57281721 | Msa0820120:intron | 45.0% |
| GGAAGTTGTTCTTCATGTCC+AGG | - | chr5_3:57281857-57281876 | Msa0820120:intron | 45.0% | |
| ! | AGTGATGATGATCAAGGACC+TGG | + | chr5_3:57281878-57281897 | None:intergenic | 45.0% |
| !! | GTTGGCTCTTTTTGTCCTCT+TGG | - | chr5_3:57281958-57281977 | Msa0820120:intron | 45.0% |
| !!! | AAAATTTTATTCTAATAATT+CGG | + | chr5_3:57274231-57274250 | None:intergenic | 5.0% |
| GAATGCTTGGGTACTCTGCT+TGG | - | chr5_3:57274566-57274585 | Msa0820120:intron | 50.0% | |
| ACTGAGTGCCTATGTAGCAC+TGG | - | chr5_3:57274708-57274727 | Msa0820120:intron | 50.0% | |
| ! | GCACTGGCACTACATGTTGA+AGG | - | chr5_3:57274724-57274743 | Msa0820120:intron | 50.0% |
| GCCGACATGTGTCGAACATT+CGG | + | chr5_3:57274755-57274774 | None:intergenic | 50.0% | |
| AGAAGACCCTAAACGGGCAA+TGG | - | chr5_3:57275069-57275088 | Msa0820120:CDS | 50.0% | |
| GCAATGGAGGAGCAATATGG+TGG | - | chr5_3:57275085-57275104 | Msa0820120:CDS | 50.0% | |
| ! | GCAATATGGTGGTGAGGAAG+AGG | - | chr5_3:57275096-57275115 | Msa0820120:CDS | 50.0% |
| GTGTGTGTGTGTGTGTGTGT+GGG | + | chr5_3:57274635-57274654 | None:intergenic | 50.0% | |
| TGTGTGTGTGTGTGTGTGTG+TGG | + | chr5_3:57274634-57274653 | None:intergenic | 50.0% | |
| ! | CGATCCGCGATTGATGACAT+TGG | + | chr5_3:57276038-57276057 | None:intergenic | 50.0% |
| !! | TGCCGTCATAGCTTGCTATC+TGG | - | chr5_3:57276105-57276124 | Msa0820120:intron | 50.0% |
| GTGGCACGAGATGAAGATCT+TGG | - | chr5_3:57276487-57276506 | Msa0820120:CDS | 50.0% | |
| GGAAACTCCGCACTTTGTCA+TGG | + | chr5_3:57276552-57276571 | None:intergenic | 50.0% | |
| GTCTTCTCAGGTGGTGCAAT+GGG | + | chr5_3:57278016-57278035 | None:intergenic | 50.0% | |
| TGTCTTCTCAGGTGGTGCAA+TGG | + | chr5_3:57278017-57278036 | None:intergenic | 50.0% | |
| TGCACCACCTGAGAAGACAA+AGG | - | chr5_3:57278018-57278037 | Msa0820120:intron | 50.0% | |
| TACCGTAGCTCCTCTTTCTC+AGG | + | chr5_3:57278076-57278095 | None:intergenic | 50.0% | |
| CATTTCGAGCAAGCCAGGTA+TGG | - | chr5_3:57278661-57278680 | Msa0820120:intron | 50.0% | |
| CCGTGAATGCAGCTTGAAGA+TGG | - | chr5_3:57278746-57278765 | Msa0820120:intron | 50.0% | |
| CTTTCAGAAGGCTCCTGCTA+CGG | - | chr5_3:57278781-57278800 | Msa0820120:intron | 50.0% | |
| TGCTCCTCATTATCCGTAGC+AGG | + | chr5_3:57278797-57278816 | None:intergenic | 50.0% | |
| GGAATATGTGCACAATCGCC+AGG | - | chr5_3:57278847-57278866 | Msa0820120:intron | 50.0% | |
| AAGCACCATACACGTGTGTG+GGG | + | chr5_3:57279210-57279229 | None:intergenic | 50.0% | |
| CTAAGCACCATACACGTGTG+TGG | + | chr5_3:57279212-57279231 | None:intergenic | 50.0% | |
| CACACACGTGTATGGTGCTT+AGG | - | chr5_3:57279210-57279229 | Msa0820120:intron | 50.0% | |
| TGGACGACCCATCCAAAATC+AGG | - | chr5_3:57279321-57279340 | Msa0820120:intron | 50.0% | |
| ! | GGGTGAGCCTGATTTTGGAT+GGG | + | chr5_3:57279331-57279350 | None:intergenic | 50.0% |
| !! | GCTTTGCTTTGGGAGTCTGA+TGG | + | chr5_3:57279826-57279845 | None:intergenic | 50.0% |
| !! | CTCCCAAAGCAAAGCACTGT+AGG | - | chr5_3:57279831-57279850 | Msa0820120:intron | 50.0% |
| CACTGTAGGAGATGTCCTTG+AGG | - | chr5_3:57279845-57279864 | Msa0820120:intron | 50.0% | |
| GGCCTTCATGACTTGAGCTA+AGG | - | chr5_3:57279966-57279985 | Msa0820120:intron | 50.0% | |
| TGCACAAGGCTGGCAAACAA+TGG | + | chr5_3:57280007-57280026 | None:intergenic | 50.0% | |
| ACAACAGTCGCAACTGCACA+AGG | + | chr5_3:57280021-57280040 | None:intergenic | 50.0% | |
| CTCGTCCTGATACTGAGCTT+AGG | - | chr5_3:57280166-57280185 | Msa0820120:intron | 50.0% | |
| CTTTCTTCTTTGAGTGGGGC+TGG | - | chr5_3:57280504-57280523 | Msa0820120:CDS | 50.0% | |
| ! | TCAGAGTCCTCAAGGTACTC+AGG | + | chr5_3:57281144-57281163 | None:intergenic | 50.0% |
| GAAGAGACGTATATGGTGCC+TGG | - | chr5_3:57281308-57281327 | Msa0820120:intron | 50.0% | |
| ! | TTTGAGATCAGTGACCGAGG+TGG | - | chr5_3:57281705-57281724 | Msa0820120:intron | 50.0% |
| AAAACCTGCACACACCACCT+CGG | + | chr5_3:57281722-57281741 | None:intergenic | 50.0% | |
| AAAGCTCAAGGAGCTGTGGT+CGG | + | chr5_3:57281816-57281835 | None:intergenic | 50.0% | |
| GCAAAAAGCTCAAGGAGCTG+TGG | + | chr5_3:57281820-57281839 | None:intergenic | 50.0% | |
| ! | CAGCGCAGTGATGATGATCA+AGG | + | chr5_3:57281884-57281903 | None:intergenic | 50.0% |
| TTCTAGCGAGGGCTGCAAAA+TGG | - | chr5_3:57282022-57282041 | Msa0820120:CDS | 50.0% | |
| TGCAGCCTCCATATACTCGT+TGG | - | chr5_3:57282088-57282107 | Msa0820120:CDS | 50.0% | |
| TGTGAACCAGAACGCTGGGA+GGG | + | chr5_3:57273684-57273703 | None:intergenic | 55.0% | |
| CCACTGTGAACCAGAACGCT+GGG | + | chr5_3:57273688-57273707 | None:intergenic | 55.0% | |
| ACCACTGTGAACCAGAACGC+TGG | + | chr5_3:57273689-57273708 | None:intergenic | 55.0% | |
| !! | AGCGTTCTGGTTCACAGTGG+TGG | - | chr5_3:57273688-57273707 | Msa0820120:three_prime_UTR | 55.0% |
| ! | GTTCACAGTGGTGGTGTGCA+TGG | - | chr5_3:57273697-57273716 | Msa0820120:three_prime_UTR | 55.0% |
| GTTAGAGAGGTTGGGCCAAG+AGG | - | chr5_3:57273968-57273987 | Msa0820120:three_prime_UTR | 55.0% | |
| CCAACTGCCAACCAACCACT+AGG | + | chr5_3:57274300-57274319 | None:intergenic | 55.0% | |
| ! | CCTAGTGGTTGGTTGGCAGT+TGG | - | chr5_3:57274297-57274316 | Msa0820120:intron | 55.0% |
| TTGGTTGGCAGTTGGCTGTG+AGG | - | chr5_3:57274305-57274324 | Msa0820120:intron | 55.0% | |
| GGGAAGGGAAGGAGTAACCT+GGG | + | chr5_3:57274359-57274378 | None:intergenic | 55.0% | |
| TGGGAAGGGAAGGAGTAACC+TGG | + | chr5_3:57274360-57274379 | None:intergenic | 55.0% | |
| AGACCCTAAACGGGCAATGG+AGG | - | chr5_3:57275072-57275091 | Msa0820120:CDS | 55.0% | |
| GCTCCTCCATTGCCCGTTTA+GGG | + | chr5_3:57275078-57275097 | None:intergenic | 55.0% | |
| TGCTCCTCCATTGCCCGTTT+AGG | + | chr5_3:57275079-57275098 | None:intergenic | 55.0% | |
| CGGGCAATGGAGGAGCAATA+TGG | - | chr5_3:57275082-57275101 | Msa0820120:CDS | 55.0% | |
| ! | GGAGGAGCAATATGGTGGTG+AGG | - | chr5_3:57275090-57275109 | Msa0820120:CDS | 55.0% |
| ! | TTGCCCAAAGCCAAAAGCGC+TGG | + | chr5_3:57277254-57277273 | None:intergenic | 55.0% |
| TTTGGAAGTGGAGCGTGGAC+CGG | - | chr5_3:57277891-57277910 | Msa0820120:CDS | 55.0% | |
| GGATCAGGCACTAGCAGTCA+TGG | - | chr5_3:57278397-57278416 | Msa0820120:intron | 55.0% | |
| GGCTCCTGCTACGGATAATG+AGG | - | chr5_3:57278790-57278809 | Msa0820120:intron | 55.0% | |
| AGCACCATACACGTGTGTGG+GGG | + | chr5_3:57279209-57279228 | None:intergenic | 55.0% | |
| ! | GGGGTGAGCCTGATTTTGGA+TGG | + | chr5_3:57279332-57279351 | None:intergenic | 55.0% |
| ! | GTGTGGGGTGAGCCTGATTT+TGG | + | chr5_3:57279336-57279355 | None:intergenic | 55.0% |
| CCTCGGTACTTGATAGGCTG+GGG | + | chr5_3:57279383-57279402 | None:intergenic | 55.0% | |
| CCCTCGGTACTTGATAGGCT+GGG | + | chr5_3:57279384-57279403 | None:intergenic | 55.0% | |
| !! | CCCAGCCTATCAAGTACCGA+GGG | - | chr5_3:57279381-57279400 | Msa0820120:intron | 55.0% |
| !! | CCAGCCTATCAAGTACCGAG+GGG | - | chr5_3:57279382-57279401 | Msa0820120:intron | 55.0% |
| TCCACCCCTCGGTACTTGAT+AGG | + | chr5_3:57279389-57279408 | None:intergenic | 55.0% | |
| !! | GCTTTGGGAGTCTGATGGTG+TGG | + | chr5_3:57279821-57279840 | None:intergenic | 55.0% |
| ATACTGGACACTACGAGCCG+AGG | - | chr5_3:57280465-57280484 | Msa0820120:CDS | 55.0% | |
| TCTTTGAGTGGGGCTGGGAA+AGG | - | chr5_3:57280510-57280529 | Msa0820120:CDS | 55.0% | |
| CAAGCCAAGATACTGCTCCC+AGG | + | chr5_3:57281329-57281348 | None:intergenic | 55.0% | |
| CTGGGAGCAGTATCTTGGCT+TGG | - | chr5_3:57281327-57281346 | Msa0820120:intron | 55.0% | |
| GATTTCCCCTCCCAGCGTTC+TGG | - | chr5_3:57273675-57273694 | Msa0820120:three_prime_UTR | 60.0% | |
| GTGAACCAGAACGCTGGGAG+GGG | + | chr5_3:57273683-57273702 | None:intergenic | 60.0% | |
| CTGTGAACCAGAACGCTGGG+AGG | + | chr5_3:57273685-57273704 | None:intergenic | 60.0% | |
| !! | CCCAGCGTTCTGGTTCACAG+TGG | - | chr5_3:57273685-57273704 | Msa0820120:three_prime_UTR | 60.0% |
| ! | CACAGTGGTGGTGTGCATGG+TGG | - | chr5_3:57273700-57273719 | Msa0820120:three_prime_UTR | 60.0% |
| ! | GGCCGACTCTCTCTGATCAG+TGG | - | chr5_3:57273743-57273762 | Msa0820120:three_prime_UTR | 60.0% |
| !! | TTGGGCCAAGAGGTGCTGTG+TGG | - | chr5_3:57273978-57273997 | Msa0820120:three_prime_UTR | 60.0% |
| !! | TGGGCCAAGAGGTGCTGTGT+GGG | - | chr5_3:57273979-57273998 | Msa0820120:three_prime_UTR | 60.0% |
| CACTCCCACACAGCACCTCT+TGG | + | chr5_3:57273986-57274005 | None:intergenic | 60.0% | |
| !! | CAAGAGGTGCTGTGTGGGAG+TGG | - | chr5_3:57273984-57274003 | Msa0820120:three_prime_UTR | 60.0% |
| ! | GGTGCTGTGTGGGAGTGGAT+AGG | - | chr5_3:57273989-57274008 | Msa0820120:three_prime_UTR | 60.0% |
| GGGTAGCTGAGTTCGATCCC+AGG | - | chr5_3:57274339-57274358 | Msa0820120:intron | 60.0% | |
| TGTGCCCCCACACACGTGTA+TGG | - | chr5_3:57279202-57279221 | Msa0820120:intron | 60.0% | |
| ! | CCCCAGCCTATCAAGTACCG+AGG | - | chr5_3:57279380-57279399 | Msa0820120:intron | 60.0% |
| CCCCTCGGTACTTGATAGGC+TGG | + | chr5_3:57279385-57279404 | None:intergenic | 60.0% | |
| !! | GCCTATCAAGTACCGAGGGG+TGG | - | chr5_3:57279385-57279404 | Msa0820120:intron | 60.0% |
| CAGTCGCAACTGCACAAGGC+TGG | + | chr5_3:57280017-57280036 | None:intergenic | 60.0% | |
| TTGAGTGGGGCTGGGAAAGG+AGG | - | chr5_3:57280513-57280532 | Msa0820120:CDS | 60.0% | |
| ! | AGGGCGTCCTGAGTACCTTG+AGG | - | chr5_3:57281134-57281153 | Msa0820120:intron | 60.0% |
| GGTGCCTGGGAGCAGTATCT+TGG | - | chr5_3:57281322-57281341 | Msa0820120:intron | 60.0% | |
| CTGGACACTACGAGCCGAGG+AGG | - | chr5_3:57280468-57280487 | Msa0820120:CDS | 65.0% | |
| AGTGGGGCTGGGAAAGGAGG+AGG | - | chr5_3:57280516-57280535 | Msa0820120:CDS | 65.0% | |
| GTGACCGAGGTGGTGTGTGC+AGG | - | chr5_3:57281715-57281734 | Msa0820120:intron | 65.0% | |
| GCGCGCGCACTGGGAAGGGA+AGG | + | chr5_3:57274370-57274389 | None:intergenic | 75.0% | |
| ACGCGCGCGCGCACTGGGAA+GGG | + | chr5_3:57274374-57274393 | None:intergenic | 75.0% | |
| ! | CACGCGCGCGCGCACTGGGA+AGG | + | chr5_3:57274375-57274394 | None:intergenic | 80.0% |
| ! | TCCCAGTGCGCGCGCGCGTG+TGG | - | chr5_3:57274375-57274394 | Msa0820120:intron | 80.0% |
| ! | GCCACACGCGCGCGCGCACT+GGG | + | chr5_3:57274379-57274398 | None:intergenic | 80.0% |
| ! | GGCCACACGCGCGCGCGCAC+TGG | + | chr5_3:57274380-57274399 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 57273634 | 57282145 | 57273634 | ID=Msa0820120;Name=Msa0820120 |
| chr5_3 | mRNA | 57273634 | 57282145 | 57273634 | ID=Msa0820120-mRNA-1;Parent=Msa0820120;Name=Msa0820120-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.94|0.95|1|1|1|20|556|627 |
| chr5_3 | exon | 57273634 | 57274231 | 57273634 | ID=Msa0820120-mRNA-1:exon:17302;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57274386 | 57274472 | 57274386 | ID=Msa0820120-mRNA-1:exon:17301;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57274594 | 57274668 | 57274594 | ID=Msa0820120-mRNA-1:exon:17300;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57274818 | 57274934 | 57274818 | ID=Msa0820120-mRNA-1:exon:17299;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57275036 | 57275122 | 57275036 | ID=Msa0820120-mRNA-1:exon:17298;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57275290 | 57275355 | 57275290 | ID=Msa0820120-mRNA-1:exon:17297;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57275558 | 57275623 | 57275558 | ID=Msa0820120-mRNA-1:exon:17296;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57275898 | 57275969 | 57275898 | ID=Msa0820120-mRNA-1:exon:17295;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57276154 | 57276255 | 57276154 | ID=Msa0820120-mRNA-1:exon:17294;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57276337 | 57276514 | 57276337 | ID=Msa0820120-mRNA-1:exon:17293;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57276617 | 57276672 | 57276617 | ID=Msa0820120-mRNA-1:exon:17292;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57276911 | 57277021 | 57276911 | ID=Msa0820120-mRNA-1:exon:17291;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57277102 | 57277170 | 57277102 | ID=Msa0820120-mRNA-1:exon:17290;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57277494 | 57277602 | 57277494 | ID=Msa0820120-mRNA-1:exon:17289;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57277687 | 57277775 | 57277687 | ID=Msa0820120-mRNA-1:exon:17288;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57277867 | 57277944 | 57277867 | ID=Msa0820120-mRNA-1:exon:17287;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57278444 | 57278566 | 57278444 | ID=Msa0820120-mRNA-1:exon:17286;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57280419 | 57280565 | 57280419 | ID=Msa0820120-mRNA-1:exon:17285;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57280662 | 57280740 | 57280662 | ID=Msa0820120-mRNA-1:exon:17284;Parent=Msa0820120-mRNA-1 |
| chr5_3 | exon | 57282015 | 57282145 | 57282015 | ID=Msa0820120-mRNA-1:exon:17283;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57282015 | 57282145 | 57282015 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57280662 | 57280740 | 57280662 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57280419 | 57280565 | 57280419 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57278444 | 57278566 | 57278444 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57277867 | 57277944 | 57277867 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57277687 | 57277775 | 57277687 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57277494 | 57277602 | 57277494 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57277102 | 57277170 | 57277102 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57276911 | 57277021 | 57276911 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57276617 | 57276672 | 57276617 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57276337 | 57276514 | 57276337 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57276154 | 57276255 | 57276154 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57275898 | 57275969 | 57275898 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57275558 | 57275623 | 57275558 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57275290 | 57275355 | 57275290 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57275036 | 57275122 | 57275036 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57274818 | 57274934 | 57274818 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57274594 | 57274668 | 57274594 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57274386 | 57274472 | 57274386 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | CDS | 57274190 | 57274231 | 57274190 | ID=Msa0820120-mRNA-1:cds;Parent=Msa0820120-mRNA-1 |
| chr5_3 | three_prime_UTR | 57273634 | 57274189 | 57273634 | ID=Msa0820120-mRNA-1:three_prime_utr;Parent=Msa0820120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
