Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392440 | KEH32786.1 | 82.400 | 125 | 22 | 0 | 385 | 509 | 460 | 584 | 2.00e-60 | 221 |
| Msa0392440 | KEH32786.1 | 95.433 | 416 | 8 | 3 | 1 | 407 | 1 | 414 | 0.0 | 774 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392440 | sp|O23212|U2A2A_ARATH | 65.396 | 341 | 102 | 8 | 79 | 407 | 27 | 363 | 1.57e-111 | 346 |
| Msa0392440 | sp|O23212|U2A2A_ARATH | 60.606 | 165 | 63 | 1 | 385 | 549 | 409 | 571 | 3.56e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392440 | A0A072UTX0 | 82.400 | 125 | 22 | 0 | 385 | 509 | 460 | 584 | 9.57e-61 | 221 |
| Msa0392440 | A0A072UTX0 | 95.433 | 416 | 8 | 3 | 1 | 407 | 1 | 414 | 0.0 | 774 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003890 | Msa0392440 | 0.805245 | 1.465043e-49 | -8.615850e-47 |
| Msa0011170 | Msa0392440 | 0.807131 | 5.872719e-50 | -8.615850e-47 |
| Msa0020930 | Msa0392440 | 0.828150 | 1.055130e-54 | -8.615850e-47 |
| Msa0031340 | Msa0392440 | 0.802579 | 5.247263e-49 | -8.615850e-47 |
| Msa0034110 | Msa0392440 | 0.807109 | 5.934403e-50 | -8.615850e-47 |
| Msa0036140 | Msa0392440 | 0.829366 | 5.358326e-55 | -8.615850e-47 |
| Msa0043560 | Msa0392440 | 0.800845 | 1.190701e-48 | -8.615850e-47 |
| Msa0045790 | Msa0392440 | 0.819508 | 1.119195e-52 | -8.615850e-47 |
| Msa0046160 | Msa0392440 | 0.823767 | 1.160257e-53 | -8.615850e-47 |
| Msa0068680 | Msa0392440 | 0.834616 | 2.704468e-56 | -8.615850e-47 |
| Msa0075360 | Msa0392440 | 0.824742 | 6.846635e-54 | -8.615850e-47 |
| Msa0079070 | Msa0392440 | 0.829206 | 5.859363e-55 | -8.615850e-47 |
| Msa0086760 | Msa0392440 | 0.804273 | 2.338215e-49 | -8.615850e-47 |
| Msa0091460 | Msa0392440 | 0.824225 | 9.057307e-54 | -8.615850e-47 |
| Msa0095560 | Msa0392440 | 0.827833 | 1.257160e-54 | -8.615850e-47 |
| Msa0102200 | Msa0392440 | 0.813288 | 2.761327e-51 | -8.615850e-47 |
| Msa0114060 | Msa0392440 | 0.837408 | 5.291008e-57 | -8.615850e-47 |
| Msa0115540 | Msa0392440 | 0.835076 | 2.071457e-56 | -8.615850e-47 |
| Msa0116080 | Msa0392440 | 0.801715 | 7.900648e-49 | -8.615850e-47 |
| Msa0119960 | Msa0392440 | 0.800374 | 1.485263e-48 | -8.615850e-47 |
| Msa0127650 | Msa0392440 | 0.828748 | 7.566494e-55 | -8.615850e-47 |
| Msa0159930 | Msa0392440 | 0.833501 | 5.144374e-56 | -8.615850e-47 |
| Msa0166870 | Msa0392440 | 0.803722 | 3.043176e-49 | -8.615850e-47 |
| Msa0188900 | Msa0392440 | 0.835128 | 2.009099e-56 | -8.615850e-47 |
| Msa0204770 | Msa0392440 | 0.824774 | 6.726010e-54 | -8.615850e-47 |
| Msa0220580 | Msa0392440 | 0.824540 | 7.637439e-54 | -8.615850e-47 |
| Msa0231370 | Msa0392440 | 0.835079 | 2.067233e-56 | -8.615850e-47 |
| Msa0373930 | Msa0392440 | 0.803954 | 2.723895e-49 | -8.615850e-47 |
| Msa0376350 | Msa0392440 | 0.833141 | 6.324312e-56 | -8.615850e-47 |
| Msa0379640 | Msa0392440 | 0.804644 | 1.956340e-49 | -8.615850e-47 |
| Msa0392400 | Msa0392440 | 0.956793 | 1.272416e-114 | -8.615850e-47 |
| Msa0392440 | Msa0393080 | 0.839176 | 1.852744e-57 | -8.615850e-47 |
| Msa0392440 | Msa0398670 | 0.803416 | 3.522090e-49 | -8.615850e-47 |
| Msa0392440 | Msa0411160 | 0.808433 | 3.104962e-50 | -8.615850e-47 |
| Msa0392440 | Msa0411190 | 0.812369 | 4.390066e-51 | -8.615850e-47 |
| Msa0392440 | Msa0424790 | 0.829617 | 4.657121e-55 | -8.615850e-47 |
| Msa0392440 | Msa0436760 | 0.806581 | 7.672267e-50 | -8.615850e-47 |
| Msa0392440 | Msa0440750 | 0.856420 | 3.257092e-62 | -8.615850e-47 |
| Msa0392440 | Msa0453350 | 0.803434 | 3.492582e-49 | -8.615850e-47 |
| Msa0392440 | Msa0464380 | 0.815406 | 9.395245e-52 | -8.615850e-47 |
| Msa0392440 | Msa0468270 | 0.800352 | 1.500416e-48 | -8.615850e-47 |
| Msa0392440 | Msa0484720 | 0.819213 | 1.307248e-52 | -8.615850e-47 |
| Msa0392440 | Msa0487420 | 0.808275 | 3.355509e-50 | -8.615850e-47 |
| Msa0392440 | Msa0487550 | 0.937319 | 4.200392e-98 | -8.615850e-47 |
| Msa0392440 | Msa0487610 | 0.931384 | 4.087492e-94 | -8.615850e-47 |
| Msa0392440 | Msa0488560 | 0.810467 | 1.136223e-50 | -8.615850e-47 |
| Msa0392440 | Msa0493630 | 0.805168 | 1.520335e-49 | -8.615850e-47 |
| Msa0392440 | Msa0516170 | 0.837079 | 6.421666e-57 | -8.615850e-47 |
| Msa0392440 | Msa0521430 | 0.802884 | 4.539674e-49 | -8.615850e-47 |
| Msa0392440 | Msa0545210 | 0.854326 | 1.325987e-61 | -8.615850e-47 |
| Msa0392440 | Msa0563840 | 0.815599 | 8.511999e-52 | -8.615850e-47 |
| Msa0392440 | Msa0577500 | 0.805328 | 1.407844e-49 | -8.615850e-47 |
| Msa0392440 | Msa0578860 | 0.826627 | 2.445939e-54 | -8.615850e-47 |
| Msa0392440 | Msa0607050 | 0.804035 | 2.620653e-49 | -8.615850e-47 |
| Msa0392440 | Msa0616160 | 0.834661 | 2.634403e-56 | -8.615850e-47 |
| Msa0392440 | Msa0663390 | 0.801531 | 8.617382e-49 | -8.615850e-47 |
| Msa0392440 | Msa0673460 | 0.823448 | 1.377528e-53 | -8.615850e-47 |
| Msa0392440 | Msa0679590 | 0.810988 | 8.764014e-51 | -8.615850e-47 |
| Msa0392440 | Msa0681270 | 0.804595 | 2.003057e-49 | -8.615850e-47 |
| Msa0392440 | Msa0709400 | 0.801612 | 8.295617e-49 | -8.615850e-47 |
| Msa0392440 | Msa0740510 | 0.838879 | 2.212067e-57 | -8.615850e-47 |
| Msa0392440 | Msa0790600 | 0.804904 | 1.726871e-49 | -8.615850e-47 |
| Msa0392440 | Msa0796700 | 0.801551 | 8.537255e-49 | -8.615850e-47 |
| Msa0392440 | Msa0799370 | 0.811071 | 8.408011e-51 | -8.615850e-47 |
| Msa0392440 | Msa0802010 | 0.817633 | 2.980013e-52 | -8.615850e-47 |
| Msa0392440 | Msa0802830 | 0.817728 | 2.836212e-52 | -8.615850e-47 |
| Msa0392440 | Msa0806280 | 0.800590 | 1.341874e-48 | -8.615850e-47 |
| Msa0392440 | Msa0806790 | 0.824570 | 7.513306e-54 | -8.615850e-47 |
| Msa0392440 | Msa0818060 | 0.803415 | 3.524623e-49 | -8.615850e-47 |
| Msa0392440 | Msa0820120 | 0.850261 | 1.904194e-60 | -8.615850e-47 |
| Msa0392440 | Msa0820770 | 0.842443 | 2.577430e-58 | -8.615850e-47 |
| Msa0392440 | Msa0824960 | 0.821846 | 3.249346e-53 | -8.615850e-47 |
| Msa0392440 | Msa0825340 | 0.806075 | 9.807567e-50 | -8.615850e-47 |
| Msa0392440 | Msa0832340 | 0.823911 | 1.073528e-53 | -8.615850e-47 |
| Msa0392440 | Msa0858390 | 0.800165 | 1.637556e-48 | -8.615850e-47 |
| Msa0392440 | Msa0860640 | 0.809643 | 1.709624e-50 | -8.615850e-47 |
| Msa0392440 | Msa0861090 | 0.838598 | 2.614551e-57 | -8.615850e-47 |
| Msa0392440 | Msa0862110 | 0.815743 | 7.907341e-52 | -8.615850e-47 |
| Msa0392440 | Msa0862320 | 0.811199 | 7.888930e-51 | -8.615850e-47 |
| Msa0392440 | Msa0880950 | 0.819438 | 1.161424e-52 | -8.615850e-47 |
| Msa0392440 | Msa0895120 | 0.832541 | 8.914798e-56 | -8.615850e-47 |
| Msa0392440 | Msa0909740 | 0.835483 | 1.634196e-56 | -8.615850e-47 |
| Msa0392440 | Msa0945970 | 0.815766 | 7.815167e-52 | -8.615850e-47 |
| Msa0392440 | Msa0963270 | 0.800772 | 1.232293e-48 | -8.615850e-47 |
| Msa0392440 | Msa1018100 | 0.807544 | 4.800338e-50 | -8.615850e-47 |
| Msa0392440 | Msa1045200 | 0.817284 | 3.570976e-52 | -8.615850e-47 |
| Msa0392440 | Msa1082500 | 0.814903 | 1.215613e-51 | -8.615850e-47 |
| Msa0392440 | Msa1089180 | 0.800349 | 1.502722e-48 | -8.615850e-47 |
| Msa0392440 | Msa1101090 | 0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0392440 | Msa1124960 | 0.808826 | 2.559300e-50 | -8.615850e-47 |
| Msa0392440 | Msa1159840 | 0.810726 | 9.986260e-51 | -8.615850e-47 |
| Msa0392440 | Msa1204530 | 0.826665 | 2.395245e-54 | -8.615850e-47 |
| Msa0392440 | Msa1225130 | 0.811822 | 5.776366e-51 | -8.615850e-47 |
| Msa0392440 | Msa1239550 | 0.805518 | 1.284028e-49 | -8.615850e-47 |
| Msa0392440 | Msa1250530 | 0.802722 | 4.901309e-49 | -8.615850e-47 |
| Msa0392440 | Msa1255330 | 0.819399 | 1.185474e-52 | -8.615850e-47 |
| Msa0392440 | Msa1279400 | 0.827026 | 1.963718e-54 | -8.615850e-47 |
| Msa0392440 | Msa1295950 | 0.819870 | 9.254657e-53 | -8.615850e-47 |
| Msa0392440 | Msa1306840 | 0.802250 | 6.132699e-49 | -8.615850e-47 |
| Msa0392440 | Msa1324080 | 0.804535 | 2.061962e-49 | -8.615850e-47 |
| Msa0392440 | Msa1328710 | 0.814069 | 1.858783e-51 | -8.615850e-47 |
| Msa0392440 | Msa1331000 | 0.842461 | 2.550035e-58 | -8.615850e-47 |
| Msa0392440 | Msa1348890 | 0.810186 | 1.306211e-50 | -8.615850e-47 |
| Msa0392440 | Msa1372760 | 0.806115 | 9.619227e-50 | -8.615850e-47 |
| Msa0392440 | Msa1374470 | 0.817383 | 3.393819e-52 | -8.615850e-47 |
| Msa0392440 | Msa1398340 | 0.815584 | 8.577980e-52 | -8.615850e-47 |
| Msa0392440 | Msa1399550 | 0.812250 | 4.659272e-51 | -8.615850e-47 |
| Msa0392440 | Msa1409700 | 0.818632 | 1.771418e-52 | -8.615850e-47 |
| Msa0392440 | Msa1411020 | 0.821865 | 3.216792e-53 | -8.615850e-47 |
| Msa0392440 | Msa1420290 | 0.809993 | 1.437425e-50 | -8.615850e-47 |
| Msa0392440 | Msa1423390 | 0.801444 | 8.978104e-49 | -8.615850e-47 |
| Msa0392440 | Msa1424290 | 0.816967 | 4.208646e-52 | -8.615850e-47 |
| Msa0392440 | Msa1434350 | 0.817477 | 3.231588e-52 | -8.615850e-47 |
| Msa0392440 | Msa1435270 | 0.832920 | 7.175270e-56 | -8.615850e-47 |
| Msa0392440 | Msa1436480 | 0.818919 | 1.524454e-52 | -8.615850e-47 |
| Msa0392440 | Msa1439320 | 0.818132 | 2.299247e-52 | -8.615850e-47 |
| Msa0392440 | Msa1452240 | 0.841203 | 5.479164e-58 | -8.615850e-47 |
| Msa0392440 | Msa1453910 | 0.827092 | 1.893757e-54 | -8.615850e-47 |
| Msa0392440 | Msa1460020 | 0.800298 | 1.538995e-48 | -8.615850e-47 |
| Msa0392440 | Msa1460050 | 0.813671 | 2.274771e-51 | -8.615850e-47 |
| Msa0260780 | Msa0392440 | 0.810438 | 1.152723e-50 | -8.615850e-47 |
| Msa0271110 | Msa0392440 | 0.804984 | 1.661151e-49 | -8.615850e-47 |
| Msa0298610 | Msa0392440 | 0.811093 | 8.318362e-51 | -8.615850e-47 |
| Msa0331000 | Msa0392440 | 0.801481 | 8.825035e-49 | -8.615850e-47 |
| Msa0345970 | Msa0392440 | 0.860809 | 1.594689e-63 | -8.615850e-47 |
| Msa0363790 | Msa0392440 | 0.802846 | 4.621992e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392440 | MtrunA17_Chr3g0077591 | 100.000 | 160 | 0 | 0 | 248 | 407 | 1 | 160 | 3.57e-111 | 336 |
| Msa0392440 | MtrunA17_Chr3g0077591 | 88.024 | 167 | 20 | 0 | 385 | 551 | 206 | 372 | 5.49e-102 | 312 |
| Msa0392440 | MtrunA17_Chr4g0013971 | 86.471 | 170 | 23 | 0 | 238 | 407 | 48 | 217 | 1.63e-100 | 310 |
| Msa0392440 | MtrunA17_Chr4g0013971 | 73.054 | 167 | 43 | 1 | 385 | 551 | 263 | 427 | 2.60e-81 | 260 |
| Msa0392440 | MtrunA17_Chr2g0281891 | 56.766 | 303 | 113 | 6 | 107 | 407 | 16 | 302 | 5.01e-87 | 278 |
| Msa0392440 | MtrunA17_Chr2g0281891 | 48.538 | 171 | 74 | 2 | 391 | 550 | 354 | 521 | 1.05e-44 | 165 |
| Msa0392440 | MtrunA17_Chr3g0077601 | 86.093 | 151 | 10 | 3 | 1 | 142 | 1 | 149 | 8.38e-46 | 161 |
| Msa0392440 | MtrunA17_Chr1g0166661 | 25.616 | 203 | 135 | 5 | 216 | 418 | 515 | 701 | 7.16e-12 | 68.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0392440 | AT4G36690.2 | 65.396 | 341 | 102 | 8 | 79 | 407 | 27 | 363 | 1.24e-113 | 348 |
| Msa0392440 | AT4G36690.2 | 43.609 | 133 | 68 | 2 | 385 | 512 | 409 | 539 | 1.62e-26 | 114 |
| Msa0392440 | AT4G36690.3 | 65.396 | 341 | 102 | 8 | 79 | 407 | 27 | 363 | 2.95e-113 | 348 |
| Msa0392440 | AT4G36690.3 | 52.525 | 99 | 45 | 1 | 385 | 483 | 409 | 505 | 1.48e-25 | 111 |
| Msa0392440 | AT4G36690.1 | 65.396 | 341 | 102 | 8 | 79 | 407 | 27 | 363 | 1.60e-112 | 346 |
| Msa0392440 | AT4G36690.1 | 60.606 | 165 | 63 | 1 | 385 | 549 | 409 | 571 | 3.61e-63 | 217 |
| Msa0392440 | AT4G36690.4 | 61.398 | 329 | 93 | 10 | 85 | 407 | 41 | 341 | 1.40e-111 | 343 |
| Msa0392440 | AT4G36690.4 | 60.606 | 165 | 63 | 1 | 385 | 549 | 387 | 549 | 2.40e-63 | 217 |
| Msa0392440 | AT1G60900.1 | 80.189 | 212 | 38 | 2 | 198 | 407 | 170 | 379 | 5.96e-97 | 306 |
| Msa0392440 | AT1G60900.1 | 65.000 | 160 | 54 | 1 | 391 | 550 | 431 | 588 | 1.13e-65 | 224 |
| Msa0392440 | AT1G60830.2 | 70.909 | 110 | 32 | 0 | 441 | 550 | 1 | 110 | 6.38e-52 | 173 |
| Msa0392440 | AT1G60830.1 | 70.909 | 110 | 32 | 0 | 441 | 550 | 1 | 110 | 6.38e-52 | 173 |
| Msa0392440 | AT2G33435.1 | 25.114 | 219 | 143 | 4 | 183 | 383 | 763 | 978 | 7.95e-15 | 78.6 |
| Msa0392440 | AT5G16780.3 | 40.833 | 120 | 68 | 2 | 50 | 168 | 28 | 145 | 9.04e-12 | 68.6 |
| Msa0392440 | AT5G16780.1 | 40.833 | 120 | 68 | 2 | 50 | 168 | 28 | 145 | 9.04e-12 | 68.6 |
| Msa0392440 | AT5G16780.2 | 40.833 | 120 | 68 | 2 | 50 | 168 | 28 | 145 | 9.04e-12 | 68.6 |
Find 194 sgRNAs with CRISPR-Local
Find 473 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACAATATCTGCAGGTAATT+TGG | 0.109716 | 3_2:+5608936 | Msa0392440:intron |
| ATGCAGGGATTATTATATTT+TGG | 0.152376 | 3_2:+5609732 | Msa0392440:three_prime_UTR |
| AAAGAGAGAGACAGAGAAAA+TGG | 0.193147 | 3_2:+5603375 | Msa0392440:exon |
| GGAGAGAAAAGGAGAGAAAA+AGG | 0.195497 | 3_2:+5604747 | Msa0392440:CDS |
| ATCCAAAGCCATTGCATTGC+TGG | 0.249411 | 3_2:-5607924 | None:intergenic |
| GTAGGCAGGGGAAACATATT+TGG | 0.249719 | 3_2:-5607152 | None:intergenic |
| GGACTGAATGGAAGAAAATT+TGG | 0.262626 | 3_2:+5609599 | Msa0392440:CDS |
| CGACAGGAATGCTCCAAATT+TGG | 0.265569 | 3_2:+5608721 | Msa0392440:CDS |
| TATGATCTTCTTCTTGTTGT+TGG | 0.275831 | 3_2:-5603432 | None:intergenic |
| GGACTATCACCTGGCTCTGC+TGG | 0.288932 | 3_2:+5608160 | Msa0392440:CDS |
| CTAATTGTGTTCTTGTTACT+TGG | 0.313146 | 3_2:+5609685 | Msa0392440:exon |
| TGACAAGAAGTTTGCCTTTG+TGG | 0.314678 | 3_2:+5607880 | Msa0392440:CDS |
| GGTTAGGTTGGCTTGGCCCT+AGG | 0.315523 | 3_2:-5608114 | None:intergenic |
| CTAAGCCCAGATTAAGGTTT+GGG | 0.324353 | 3_2:-5608135 | None:intergenic |
| AACTTTCTTCAGTCAGGTTA+TGG | 0.329007 | 3_2:+5607796 | Msa0392440:CDS |
| GTCCAACTAAGCCCAGATTA+AGG | 0.333587 | 3_2:-5608141 | None:intergenic |
| GACTATCACCTGGCTCTGCT+GGG | 0.339084 | 3_2:+5608161 | Msa0392440:CDS |
| GTACTTGCAGGTCAGATCTC+TGG | 0.343612 | 3_2:+5607101 | Msa0392440:intron |
| ACCTAACCCAAACCTTAATC+TGG | 0.348497 | 3_2:+5608129 | Msa0392440:CDS |
| GGGGCAAGTCCTGCTATTCC+TGG | 0.350763 | 3_2:+5607122 | Msa0392440:CDS |
| GGTTCTACCAAAGCCCGTTC+TGG | 0.352285 | 3_2:+5609578 | Msa0392440:CDS |
| AGAGAAAAGGAGCGGGAGAA+TGG | 0.360404 | 3_2:+5604725 | Msa0392440:CDS |
| ATGCTCTCTTGTTCAGGTTT+AGG | 0.362273 | 3_2:-5608454 | None:intergenic |
| GCAGGGACAGGGTCAGAGAT+AGG | 0.363846 | 3_2:+5604843 | Msa0392440:CDS |
| TACTTGCAGGTCAGATCTCT+GGG | 0.364212 | 3_2:+5607102 | Msa0392440:intron |
| GAGAAAAGGAGCGGGAGAAT+GGG | 0.371959 | 3_2:+5604726 | Msa0392440:CDS |
| TTGGGTGCTACTGGTGTTGC+AGG | 0.372909 | 3_2:+5606386 | Msa0392440:CDS |
| TGTTCAGGTTTAGGCTGCAT+TGG | 0.376618 | 3_2:-5608445 | None:intergenic |
| TCTCCCTGTCTTGCCAGTTC+AGG | 0.382609 | 3_2:+5607281 | Msa0392440:CDS |
| AAAGGGATAAGGGAAGAGAC+AGG | 0.384703 | 3_2:+5604765 | Msa0392440:CDS |
| CCCTGAGCAAATTTGTTCTC+TGG | 0.391081 | 3_2:-5609650 | None:intergenic |
| ATTAAAATGCTCTCTTGTTC+AGG | 0.391630 | 3_2:-5608460 | None:intergenic |
| GTTCAGGTTTAGGCTGCATT+GGG | 0.392860 | 3_2:-5608444 | None:intergenic |
| AACATATTTGGAAACATTCC+AGG | 0.392880 | 3_2:-5607140 | None:intergenic |
| TTGGAGTATGCTGATGTTGA+TGG | 0.396211 | 3_2:+5609557 | Msa0392440:CDS |
| AGCCAGCAATGCAATGGCTT+TGG | 0.400570 | 3_2:+5607922 | Msa0392440:CDS |
| TCAGAGATAGGGAGAGAAGC+AGG | 0.402248 | 3_2:+5604855 | Msa0392440:CDS |
| TGTTCTAATACAATAATACT+TGG | 0.404534 | 3_2:+5609826 | Msa0392440:three_prime_UTR |
| TCATCATCTTTGAGCTCATC+AGG | 0.405363 | 3_2:-5608670 | None:intergenic |
| GTTTCCCCTGCCTACAAATC+AGG | 0.406555 | 3_2:+5607160 | Msa0392440:CDS |
| ACAGAGAGAGTGAGAGAAGC+AGG | 0.408072 | 3_2:+5604825 | Msa0392440:CDS |
| TTTATTCAAGATTTATATGC+AGG | 0.413958 | 3_2:+5609716 | Msa0392440:three_prime_UTR |
| AGTCAGGTTATGGCTACAAT+TGG | 0.415102 | 3_2:+5607806 | Msa0392440:CDS |
| CCGTCTCTAGCTGCTGCCCT+AGG | 0.416793 | 3_2:+5608097 | Msa0392440:CDS |
| AGTTGCAACTTTCTTCAGTC+AGG | 0.418446 | 3_2:+5607790 | Msa0392440:CDS |
| TCACCATCAGGCCGTGGGCG+AGG | 0.421457 | 3_2:-5608973 | None:intergenic |
| TCCAGAGAACAAATTTGCTC+AGG | 0.424734 | 3_2:+5609649 | Msa0392440:CDS |
| ATAGGGAGAGAAGCAGGGAC+AGG | 0.428035 | 3_2:+5604861 | Msa0392440:CDS |
| TCTTCCATTCAGTCCAGAAC+GGG | 0.431470 | 3_2:-5609591 | None:intergenic |
| ACTAAGCCCAGATTAAGGTT+TGG | 0.432382 | 3_2:-5608136 | None:intergenic |
| GTTAGGTTGGCTTGGCCCTA+GGG | 0.433054 | 3_2:-5608113 | None:intergenic |
| ACCTTTGTTGCCACCAATGC+TGG | 0.434466 | 3_2:-5608622 | None:intergenic |
| AACCTTAATCTGGGCTTAGT+TGG | 0.436600 | 3_2:+5608139 | Msa0392440:CDS |
| GCGGGAGAATGGGAGAGAAA+AGG | 0.437926 | 3_2:+5604736 | Msa0392440:CDS |
| ATAGGGATAGGGAGAAAAGC+AGG | 0.441332 | 3_2:+5604801 | Msa0392440:CDS |
| ACAGGGAACGCGATCGGGAT+GGG | 0.441548 | 3_2:+5604909 | Msa0392440:CDS |
| GTGAGATCTTCTTCATCAAC+AGG | 0.443011 | 3_2:-5603493 | None:intergenic |
| ATAGCCTGAACTGGCAAGAC+AGG | 0.443744 | 3_2:-5607285 | None:intergenic |
| TCAACAGGTGGTGGTGGTGG+TGG | 0.445563 | 3_2:-5603478 | None:intergenic |
| GTGAGAGAAAGGAAAGGGTA+AGG | 0.445978 | 3_2:+5604993 | Msa0392440:CDS |
| CAAAGACAGGGAACGCGATC+GGG | 0.446135 | 3_2:+5604904 | Msa0392440:CDS |
| AAAATACCTGATTTGTAGGC+AGG | 0.446527 | 3_2:-5607166 | None:intergenic |
| CCCAGATTAAGGTTTGGGTT+AGG | 0.447397 | 3_2:-5608130 | None:intergenic |
| AGGTTTGGGTTAGGTTGGCT+TGG | 0.448251 | 3_2:-5608121 | None:intergenic |
| TCATCAACAGGTGGTGGTGG+TGG | 0.453350 | 3_2:-5603481 | None:intergenic |
| AAGAGAGAGACAGAGAAAAT+GGG | 0.457112 | 3_2:+5603376 | Msa0392440:exon |
| ATTCAGTCCAGAACGGGCTT+TGG | 0.457567 | 3_2:-5609585 | None:intergenic |
| ATCCCTCGCCCACGGCCTGA+TGG | 0.463255 | 3_2:+5608970 | Msa0392440:CDS |
| AAATACGTTGGATTTGGAAT+CGG | 0.463999 | 3_2:-5603515 | None:intergenic |
| ATAGAAGCAGGGATAGGGAT+AGG | 0.464430 | 3_2:+5604789 | Msa0392440:CDS |
| AGGGTGCACCAGTGAAGGTC+AGG | 0.465241 | 3_2:+5608056 | Msa0392440:intron |
| CAGGGAACGCGATCGGGATG+GGG | 0.465625 | 3_2:+5604910 | Msa0392440:CDS |
| AAGCAAACCTTTCCAACTCC+AGG | 0.469840 | 3_2:-5609003 | None:intergenic |
| CCTGATGGTGAACTGTGCCC+TGG | 0.472461 | 3_2:+5608985 | Msa0392440:CDS |
| GCAAAGACAGGGAACGCGAT+CGG | 0.473825 | 3_2:+5604903 | Msa0392440:CDS |
| CACAGTTCACCATCAGGCCG+TGG | 0.474395 | 3_2:-5608979 | None:intergenic |
| GATTAAGGTTTGGGTTAGGT+TGG | 0.474494 | 3_2:-5608126 | None:intergenic |
| AGAGTGAGAGAAGCAGGGAC+AGG | 0.475476 | 3_2:+5604831 | Msa0392440:CDS |
| ACGCGATCGGGATGGGGAGA+AGG | 0.475708 | 3_2:+5604916 | Msa0392440:CDS |
| CACCATCAGGCCGTGGGCGA+GGG | 0.476970 | 3_2:-5608972 | None:intergenic |
| ATCGGGATGGGGAGAAGGAA+AGG | 0.478929 | 3_2:+5604921 | Msa0392440:CDS |
| ATCCTCCAGAAGTAGAGAAA+AGG | 0.482000 | 3_2:+5604712 | Msa0392440:CDS |
| GGAGGAAACACCGCTGGTCC+AGG | 0.482975 | 3_2:+5607827 | Msa0392440:CDS |
| ACAGGGATAGAAGCAGGGAT+AGG | 0.486106 | 3_2:+5604783 | Msa0392440:CDS |
| GAAGAGACAGGGATAGAAGC+AGG | 0.487067 | 3_2:+5604777 | Msa0392440:CDS |
| TCTTCATCAACAGGTGGTGG+TGG | 0.488161 | 3_2:-5603484 | None:intergenic |
| CCAGGGCACAGTTCACCATC+AGG | 0.489395 | 3_2:-5608985 | None:intergenic |
| GTAGGTCTCCTGACCTTCAC+TGG | 0.489485 | 3_2:-5608064 | None:intergenic |
| ATGGGGAGAAGGAAAGGGAG+AGG | 0.489505 | 3_2:+5604927 | Msa0392440:CDS |
| TAGAAGCAGGGATAGGGATA+GGG | 0.492088 | 3_2:+5604790 | Msa0392440:CDS |
| ACAGCAGCAGATTGCTCTGC+AGG | 0.492821 | 3_2:+5608489 | Msa0392440:CDS |
| CTCTATGATGGTCACGGTCA+CGG | 0.497953 | 3_2:-5604952 | None:intergenic |
| CACCCAATATCGCAGAAGTA+GGG | 0.498077 | 3_2:-5606370 | None:intergenic |
| ATAGTGAGAAAAGCAAAGAC+AGG | 0.498726 | 3_2:+5604891 | Msa0392440:CDS |
| GTTCTCGTTCACGCTCCAAA+AGG | 0.501480 | 3_2:+5605361 | Msa0392440:CDS |
| TCTGCGATATTGGGTGCTAC+TGG | 0.502664 | 3_2:+5606377 | Msa0392440:CDS |
| GGAAACATTCCAGGAATAGC+AGG | 0.503610 | 3_2:-5607131 | None:intergenic |
| ATTAGAACAAATCCTCCATC+AGG | 0.508317 | 3_2:-5609812 | None:intergenic |
| TGTTGTGTCATAGCCTGAAC+TGG | 0.509316 | 3_2:-5607294 | None:intergenic |
| CAGGGACAGGGTCAGAGATA+GGG | 0.509318 | 3_2:+5604844 | Msa0392440:CDS |
| CAGGTTATGGCTACAATTGG+AGG | 0.509339 | 3_2:+5607809 | Msa0392440:CDS |
| TAGGGAGAGAAGCAGGGACA+GGG | 0.509753 | 3_2:+5604862 | Msa0392440:CDS |
| AGTTTGCCTTTGTGGAAATG+AGG | 0.514390 | 3_2:+5607888 | Msa0392440:CDS |
| CAGGGATCGTAGTGAGAGAA+AGG | 0.516139 | 3_2:+5604982 | Msa0392440:CDS |
| CAGGGATAGAAGCAGGGATA+GGG | 0.516826 | 3_2:+5604784 | Msa0392440:CDS |
| GCACCCAATATCGCAGAAGT+AGG | 0.517661 | 3_2:-5606371 | None:intergenic |
| TCGGGATGGGGAGAAGGAAA+GGG | 0.521356 | 3_2:+5604922 | Msa0392440:CDS |
| TTTGCTCAGGGCGATTATGA+AGG | 0.523159 | 3_2:+5609662 | Msa0392440:CDS |
| GGCTTAGTTGGACTATCACC+TGG | 0.524073 | 3_2:+5608151 | Msa0392440:CDS |
| TATGTTACAACCAGCATTGG+TGG | 0.524223 | 3_2:+5608612 | Msa0392440:CDS |
| CTCTCCTACAGCTAATGAGC+AGG | 0.525438 | 3_2:+5607463 | Msa0392440:CDS |
| AGTTCAGGCTATGACACAAC+AGG | 0.528917 | 3_2:+5607296 | Msa0392440:CDS |
| GGTGAACTGTGCCCTGGAGT+TGG | 0.530525 | 3_2:+5608991 | Msa0392440:CDS |
| GGATTTCTAATGAATTATTG+TGG | 0.530896 | 3_2:+5609753 | Msa0392440:three_prime_UTR |
| AAAGCCCGTTCTGGACTGAA+TGG | 0.531994 | 3_2:+5609587 | Msa0392440:CDS |
| ATGATCGAGAGGATAGGCAT+AGG | 0.534779 | 3_2:+5605274 | Msa0392440:CDS |
| GATTCTTGATGATATGCGAC+AGG | 0.535785 | 3_2:+5608705 | Msa0392440:CDS |
| TCGTAGTGAGAGAAAGGAAA+GGG | 0.539193 | 3_2:+5604988 | Msa0392440:CDS |
| ACTTATGTTACAACCAGCAT+TGG | 0.539237 | 3_2:+5608609 | Msa0392440:CDS |
| AATTCAGGGTGCACCAGTGA+AGG | 0.539964 | 3_2:+5608051 | Msa0392440:intron |
| CGTCTCTAGCTGCTGCCCTA+GGG | 0.541292 | 3_2:+5608098 | Msa0392440:CDS |
| GACAGGGAACGCGATCGGGA+TGG | 0.543148 | 3_2:+5604908 | Msa0392440:CDS |
| CCCTGTGGCGATCTCTATGA+TGG | 0.547978 | 3_2:-5604964 | None:intergenic |
| AGGGAGAGAAGCAGGGACAG+GGG | 0.548129 | 3_2:+5604863 | Msa0392440:CDS |
| ACTATCACCTGGCTCTGCTG+GGG | 0.549414 | 3_2:+5608162 | Msa0392440:CDS |
| CTCGATCTAGATCAAGGTCA+AGG | 0.550814 | 3_2:+5605310 | Msa0392440:CDS |
| GGGGACTTGATGGTCCTGAT+CGG | 0.551785 | 3_2:+5608182 | Msa0392440:CDS |
| CAGAAGTAGAGAAAAGGAGC+GGG | 0.551899 | 3_2:+5604718 | Msa0392440:CDS |
| CTATCACCTGGCTCTGCTGG+GGG | 0.554838 | 3_2:+5608163 | Msa0392440:CDS |
| AAATACCTGATTTGTAGGCA+GGG | 0.555176 | 3_2:-5607165 | None:intergenic |
| TGAGAGAAAGGAAAGGGTAA+GGG | 0.556831 | 3_2:+5604994 | Msa0392440:CDS |
| CAAAGGCAAACTTCTTGTCA+TGG | 0.559361 | 3_2:-5607877 | None:intergenic |
| ACATTCACAACTGCATCACC+TGG | 0.561956 | 3_2:-5607845 | None:intergenic |
| GGCTACACGACATGCTAGAC+GGG | 0.562074 | 3_2:+5607424 | Msa0392440:intron |
| CCTAACCCAAACCTTAATCT+GGG | 0.564603 | 3_2:+5608130 | Msa0392440:CDS |
| TTCTTCCATTCAGTCCAGAA+CGG | 0.564603 | 3_2:-5609592 | None:intergenic |
| TGGGGAGAAGGAAAGGGAGA+GGG | 0.564967 | 3_2:+5604928 | Msa0392440:CDS |
| TGTTTGTTGGTATAGACGAA+GGG | 0.568551 | 3_2:+5605248 | Msa0392440:intron |
| AGCAATGCAATGGCTTTGGA+TGG | 0.568787 | 3_2:+5607926 | Msa0392440:CDS |
| ACAGAAGCCGAGGCTATGAC+AGG | 0.570049 | 3_2:+5605038 | Msa0392440:CDS |
| GCCGGTCTCGATCTAGATCA+AGG | 0.570517 | 3_2:+5605304 | Msa0392440:CDS |
| ACCAGCATTGGTGGCAACAA+AGG | 0.576598 | 3_2:+5608621 | Msa0392440:CDS |
| AAGACAGGGAGAGCACTAAA+CGG | 0.578187 | 3_2:-5607270 | None:intergenic |
| TGATGAGCTCAAAGATGATG+AGG | 0.579099 | 3_2:+5608672 | Msa0392440:CDS |
| AATACCTGATTTGTAGGCAG+GGG | 0.580602 | 3_2:-5607164 | None:intergenic |
| ATGTGGTGATCCCTCGCCCA+CGG | 0.581857 | 3_2:+5608962 | Msa0392440:CDS |
| CTGAATGGAAGAAAATTTGG+TGG | 0.582325 | 3_2:+5609602 | Msa0392440:CDS |
| CCAGAGAACAAATTTGCTCA+GGG | 0.582597 | 3_2:+5609650 | Msa0392440:CDS |
| TGCAGGTAATTTGGTTAATG+TGG | 0.583315 | 3_2:+5608945 | Msa0392440:intron |
| ACCTTGATCTAGATCGAGAC+CGG | 0.584536 | 3_2:-5605305 | None:intergenic |
| GAGTGAGAGAAGCAGGGACA+GGG | 0.585097 | 3_2:+5604832 | Msa0392440:CDS |
| TCTTCTTCATCAACAGGTGG+TGG | 0.585996 | 3_2:-5603487 | None:intergenic |
| GGGAGTATGATCGAGAGGAT+AGG | 0.586837 | 3_2:+5605268 | Msa0392440:CDS |
| GGCGATCTCTATGATGGTCA+CGG | 0.587032 | 3_2:-5604958 | None:intergenic |
| TTATTCAAGATTTATATGCA+GGG | 0.587387 | 3_2:+5609717 | Msa0392440:three_prime_UTR |
| ATCGTAGTGAGAGAAAGGAA+AGG | 0.592512 | 3_2:+5604987 | Msa0392440:CDS |
| CCTAGGGCAGCAGCTAGAGA+CGG | 0.592863 | 3_2:-5608097 | None:intergenic |
| ACCATCATAGAGATCGCCAC+AGG | 0.594034 | 3_2:+5604963 | Msa0392440:CDS |
| CTCGATCTGAGCATAGATCA+AGG | 0.594382 | 3_2:+5605334 | Msa0392440:CDS |
| AACTGCATCACCTGGACCAG+CGG | 0.595274 | 3_2:-5607837 | None:intergenic |
| AAGGGATAAGGGAAGAGACA+GGG | 0.599153 | 3_2:+5604766 | Msa0392440:CDS |
| ACTTACAGCAAAAGGACTAG+TGG | 0.602947 | 3_2:+5606332 | Msa0392440:intron |
| ATTACCTGCTCATTAGCTGT+AGG | 0.603989 | 3_2:-5607467 | None:intergenic |
| GCTAGACGGGTGTATGTTGG+TGG | 0.606173 | 3_2:+5607437 | Msa0392440:CDS |
| ACCCAATATCGCAGAAGTAG+GGG | 0.606263 | 3_2:-5606369 | None:intergenic |
| CAGAGATAGGGAGAGAAGCA+GGG | 0.607054 | 3_2:+5604856 | Msa0392440:CDS |
| ACAGTTCACCATCAGGCCGT+GGG | 0.609862 | 3_2:-5608978 | None:intergenic |
| AGGCTACACGACATGCTAGA+CGG | 0.614733 | 3_2:+5607423 | Msa0392440:intron |
| TGAAGAAGCCAGCAATGCAA+TGG | 0.615892 | 3_2:+5607916 | Msa0392440:CDS |
| ACAATTGGAGGAAACACCGC+TGG | 0.618666 | 3_2:+5607821 | Msa0392440:CDS |
| AGCAAACCTTTCCAACTCCA+GGG | 0.618687 | 3_2:-5609002 | None:intergenic |
| CCCAATATCGCAGAAGTAGG+GGG | 0.619164 | 3_2:-5606368 | None:intergenic |
| GAGAGGATAGGCATAGGAGT+AGG | 0.619167 | 3_2:+5605280 | Msa0392440:CDS |
| TCAGCTGGAATAGCACCTGA+TGG | 0.621294 | 3_2:+5609797 | Msa0392440:three_prime_UTR |
| CAGAGAGAGTGAGAGAAGCA+GGG | 0.625664 | 3_2:+5604826 | Msa0392440:CDS |
| ACTGTGCCCTGGAGTTGGAA+AGG | 0.629409 | 3_2:+5608996 | Msa0392440:CDS |
| CATGCTAGACGGGTGTATGT+TGG | 0.630630 | 3_2:+5607434 | Msa0392440:CDS |
| AAGAGACAGGGATAGAAGCA+GGG | 0.631073 | 3_2:+5604778 | Msa0392440:CDS |
| GCTCATTAGCTGTAGGAGAG+AGG | 0.632892 | 3_2:-5607460 | None:intergenic |
| TCGATCTAGATCAAGGTCAA+GGG | 0.634343 | 3_2:+5605311 | Msa0392440:CDS |
| TAGGGATAGGGAGAAAAGCA+GGG | 0.634757 | 3_2:+5604802 | Msa0392440:CDS |
| GCTGGAATAGCACCTGATGG+AGG | 0.636746 | 3_2:+5609800 | Msa0392440:three_prime_UTR |
| ACGAAGGGAGTATGATCGAG+AGG | 0.637703 | 3_2:+5605263 | Msa0392440:CDS |
| TAGCCTGAACTGGCAAGACA+GGG | 0.642494 | 3_2:-5607284 | None:intergenic |
| AACAGACCTCATTTCCACAA+AGG | 0.649507 | 3_2:-5607894 | None:intergenic |
| TAGTGAGAAAAGCAAAGACA+GGG | 0.650122 | 3_2:+5604892 | Msa0392440:CDS |
| GATGATTATCACAGAAGCCG+AGG | 0.655256 | 3_2:+5605028 | Msa0392440:CDS |
| CCAGAAGTAGAGAAAAGGAG+CGG | 0.658550 | 3_2:+5604717 | Msa0392440:CDS |
| AGATCTTCTTCATCAACAGG+TGG | 0.670030 | 3_2:-5603490 | None:intergenic |
| AGAGACGGATTATAATCAGT+AGG | 0.689160 | 3_2:-5608082 | None:intergenic |
| TTCTCTCACTACGATCCCTG+TGG | 0.694836 | 3_2:-5604979 | None:intergenic |
| CCATCATAGAGATCGCCACA+GGG | 0.695430 | 3_2:+5604964 | Msa0392440:CDS |
| ATAGGCATAGGAGTAGGCGC+CGG | 0.701001 | 3_2:+5605286 | Msa0392440:CDS |
| ACTTGCAGGTCAGATCTCTG+GGG | 0.748107 | 3_2:+5607103 | Msa0392440:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTAAGATTTTTCATTTT+AGG | + | chr3_2:5604089-5604108 | Msa0392440:intron | 10.0% |
| !! | GTTAGATAATAAATAAATAT+TGG | - | chr3_2:5605226-5605245 | None:intergenic | 10.0% |
| !!! | TATTTTGAAAAGAAAAAAAA+TGG | + | chr3_2:5609398-5609417 | Msa0392440:intron | 10.0% |
| !!! | ATTTTGAAAAGAAAAAAAAT+GGG | + | chr3_2:5609399-5609418 | Msa0392440:intron | 10.0% |
| !!! | TGAATATTTTTTTTTGTTTT+TGG | + | chr3_2:5609471-5609490 | Msa0392440:intron | 10.0% |
| !!! | GAATATTTTTTTTTGTTTTT+GGG | + | chr3_2:5609472-5609491 | Msa0392440:intron | 10.0% |
| !! | TGATTGAAATTGAAAAATAA+AGG | - | chr3_2:5603557-5603576 | None:intergenic | 15.0% |
| !!! | TTTTTCAATTTCAATCAATT+AGG | + | chr3_2:5603560-5603579 | Msa0392440:intron | 15.0% |
| !!! | TTTTCAATTTCAATCAATTA+GGG | + | chr3_2:5603561-5603580 | Msa0392440:intron | 15.0% |
| !! | GTTATAATTGAATTTCAATT+CGG | - | chr3_2:5603601-5603620 | None:intergenic | 15.0% |
| !! | ATTCAATTGTATGATTAATT+AGG | + | chr3_2:5603671-5603690 | Msa0392440:intron | 15.0% |
| !! | TTCAATTGTATGATTAATTA+GGG | + | chr3_2:5603672-5603691 | Msa0392440:intron | 15.0% |
| !! | ATTGTATGATTGATTAATTA+GGG | + | chr3_2:5603710-5603729 | Msa0392440:intron | 15.0% |
| !!! | TTTTAAAGTTTTGCAATTTT+AGG | + | chr3_2:5603876-5603895 | Msa0392440:intron | 15.0% |
| !! | TTCAAAATTTCTTATGTAAA+GGG | - | chr3_2:5604442-5604461 | None:intergenic | 15.0% |
| !! | ATTCAAAATTTCTTATGTAA+AGG | - | chr3_2:5604443-5604462 | None:intergenic | 15.0% |
| !! | AGAAGAAAAAAAAAAACAAT+AGG | - | chr3_2:5604531-5604550 | None:intergenic | 15.0% |
| !!! | TTAATGTTTTGTTTGTTTTT+TGG | + | chr3_2:5604654-5604673 | Msa0392440:intron | 15.0% |
| !! | TGAATAGAAATTATAACAAT+TGG | - | chr3_2:5605190-5605209 | None:intergenic | 15.0% |
| !! | ATAAATATACATTCAACTAT+TGG | + | chr3_2:5605793-5605812 | Msa0392440:intron | 15.0% |
| !!! | TAATTTAACCTTTTAATGTA+AGG | + | chr3_2:5606068-5606087 | Msa0392440:intron | 15.0% |
| !!! | TTTGAAATAATGAATATACA+GGG | - | chr3_2:5606138-5606157 | None:intergenic | 15.0% |
| !!! | ATTTGAAATAATGAATATAC+AGG | - | chr3_2:5606139-5606158 | None:intergenic | 15.0% |
| !! | TTCATTATTTCAAATTTCAT+AGG | + | chr3_2:5606144-5606163 | Msa0392440:intron | 15.0% |
| !! | AAAATTCATATCAAATTACA+TGG | + | chr3_2:5606499-5606518 | Msa0392440:intron | 15.0% |
| !!! | TGTAATTTCATTTTTAATTC+AGG | + | chr3_2:5608036-5608055 | Msa0392440:intron | 15.0% |
| !!! | GTAATTTCATTTTTAATTCA+GGG | + | chr3_2:5608037-5608056 | Msa0392440:intron | 15.0% |
| !! | CGATTATATATAATAAATTG+TGG | + | chr3_2:5609500-5609519 | Msa0392440:intron | 15.0% |
| !! | GAAATTGAAAAATAAAGGAA+CGG | - | chr3_2:5603552-5603571 | None:intergenic | 20.0% |
| !! | GATTGTATGATTGATTAATT+AGG | + | chr3_2:5603709-5603728 | Msa0392440:intron | 20.0% |
| !!! | TTTAGAATATTGATAACCTA+AGG | + | chr3_2:5603904-5603923 | Msa0392440:intron | 20.0% |
| !! | TCATATAACTTTACAATTTC+TGG | + | chr3_2:5603928-5603947 | Msa0392440:intron | 20.0% |
| !! | CCAAAATTTCTATTTGAAAA+GGG | - | chr3_2:5604164-5604183 | None:intergenic | 20.0% |
| !! | ACCAAAATTTCTATTTGAAA+AGG | - | chr3_2:5604165-5604184 | None:intergenic | 20.0% |
| !! | TATCACAATTGTTTCAATTT+CGG | + | chr3_2:5604191-5604210 | Msa0392440:intron | 20.0% |
| !!! | TTCATTAAAATCGAACTTTT+TGG | - | chr3_2:5604373-5604392 | None:intergenic | 20.0% |
| !!! | TTATTTTTGTTAGTGAATAG+AGG | + | chr3_2:5604398-5604417 | Msa0392440:intron | 20.0% |
| !!! | TATTTTTGTTAGTGAATAGA+GGG | + | chr3_2:5604399-5604418 | Msa0392440:intron | 20.0% |
| !! | AACAAACAAAACATTAACAA+GGG | - | chr3_2:5604651-5604670 | None:intergenic | 20.0% |
| !! | AAACAAACAAAACATTAACA+AGG | - | chr3_2:5604652-5604671 | None:intergenic | 20.0% |
| !! | TATTATCTAACATTGTTTGT+TGG | + | chr3_2:5605235-5605254 | Msa0392440:intron | 20.0% |
| !!! | AGAACTTGAAATTTTACAAA+TGG | - | chr3_2:5605451-5605470 | None:intergenic | 20.0% |
| !! | ACATGAAAACTGTAATAAAA+TGG | - | chr3_2:5605575-5605594 | None:intergenic | 20.0% |
| !!! | CACTGTTCATTATAAAATTT+TGG | + | chr3_2:5605997-5606016 | Msa0392440:intron | 20.0% |
| !! | GTAATATTCCTTACATTAAA+AGG | - | chr3_2:5606079-5606098 | None:intergenic | 20.0% |
| !! | ATTATTTCAAATTTCATAGG+TGG | + | chr3_2:5606147-5606166 | Msa0392440:intron | 20.0% |
| !! | ATCCAACACAAATAAAAAAT+GGG | - | chr3_2:5606219-5606238 | None:intergenic | 20.0% |
| !! | AAAATTATAATATAGCAGTG+AGG | + | chr3_2:5606949-5606968 | Msa0392440:intron | 20.0% |
| !!! | CATTTTTGTTTGTCTTTTTA+AGG | + | chr3_2:5607242-5607261 | Msa0392440:intron | 20.0% |
| !! | TGAGTTTCAGTAAAATAATA+AGG | - | chr3_2:5608226-5608245 | None:intergenic | 20.0% |
| !! | AACACAAAAATTACCAAATT+TGG | - | chr3_2:5608737-5608756 | None:intergenic | 20.0% |
| !! | TAAAAGACTGAAAATTATGA+AGG | - | chr3_2:5608859-5608878 | None:intergenic | 20.0% |
| !! | TAGAGAATTTCCAAAATAAT+AGG | - | chr3_2:5609035-5609054 | None:intergenic | 20.0% |
| !! | AATGAGTTAAACACATAAAT+TGG | - | chr3_2:5609276-5609295 | None:intergenic | 20.0% |
| !! | TTTATTCAAGATTTATATGC+AGG | + | chr3_2:5609716-5609735 | Msa0392440:three_prime_UTR | 20.0% |
| !! | TTATTCAAGATTTATATGCA+GGG | + | chr3_2:5609717-5609736 | Msa0392440:three_prime_UTR | 20.0% |
| !! | TGTTCTAATACAATAATACT+TGG | + | chr3_2:5609826-5609845 | Msa0392440:three_prime_UTR | 20.0% |
| ! | TTAATCAAATTTGACCCTTT+AGG | + | chr3_2:5603805-5603824 | Msa0392440:intron | 25.0% |
| ! | TAATCAAATTTGACCCTTTA+GGG | + | chr3_2:5603806-5603825 | Msa0392440:intron | 25.0% |
| !!! | TGCATTAAGTTGGTATTATT+AGG | + | chr3_2:5603847-5603866 | Msa0392440:intron | 25.0% |
| !!! | GCATTAAGTTGGTATTATTA+GGG | + | chr3_2:5603848-5603867 | Msa0392440:intron | 25.0% |
| ! | TGTAAAGTTATATGAACCTT+AGG | - | chr3_2:5603923-5603942 | None:intergenic | 25.0% |
| !!! | ACTTTACAATTTCTGGTAAT+TGG | + | chr3_2:5603935-5603954 | Msa0392440:intron | 25.0% |
| !!! | CTTTACAATTTCTGGTAATT+GGG | + | chr3_2:5603936-5603955 | Msa0392440:intron | 25.0% |
| !! | CCCTTTTCAAATAGAAATTT+TGG | + | chr3_2:5604161-5604180 | Msa0392440:intron | 25.0% |
| !!! | AGAGAAAAAATGTCACTTTT+GGG | - | chr3_2:5604253-5604272 | None:intergenic | 25.0% |
| !!! | TAGAGAAAAAATGTCACTTT+TGG | - | chr3_2:5604254-5604273 | None:intergenic | 25.0% |
| ! | AGCAAAAAAATATCACTTGT+GGG | + | chr3_2:5604286-5604305 | Msa0392440:intron | 25.0% |
| !!! | AAAGTTCGATTTTAATGAAG+AGG | + | chr3_2:5604374-5604393 | Msa0392440:intron | 25.0% |
| !! | AGAAATTTTGAATTGCTAGA+TGG | + | chr3_2:5604450-5604469 | Msa0392440:intron | 25.0% |
| !! | TGATGATGCATATAAAATGT+AGG | - | chr3_2:5604592-5604611 | None:intergenic | 25.0% |
| ! | TATCATCAAATTGGAAGATA+TGG | + | chr3_2:5604616-5604635 | Msa0392440:intron | 25.0% |
| ! | ATCATCAAATTGGAAGATAT+GGG | + | chr3_2:5604617-5604636 | Msa0392440:intron | 25.0% |
| !!! | GTAAAAGTTATTTTCTGGTT+TGG | + | chr3_2:5605060-5605079 | Msa0392440:intron | 25.0% |
| ! | TAAATCTTATGGATCTTTCT+GGG | - | chr3_2:5605392-5605411 | None:intergenic | 25.0% |
| ! | TTCGTTCAACAAATAGTTAA+AGG | + | chr3_2:5605473-5605492 | Msa0392440:intron | 25.0% |
| !! | ATATCCTTGATAATTTGATC+TGG | + | chr3_2:5605598-5605617 | Msa0392440:intron | 25.0% |
| !!! | TATAAAATTTTGGAACTCCA+TGG | + | chr3_2:5606007-5606026 | Msa0392440:intron | 25.0% |
| !! | GAAGTATCTCTTAAAACTAA+AGG | + | chr3_2:5606035-5606054 | Msa0392440:intron | 25.0% |
| ! | TTATCAGTTGTTCATACTTT+AGG | - | chr3_2:5606112-5606131 | None:intergenic | 25.0% |
| ! | TAAAGTATGAACAACTGATA+AGG | + | chr3_2:5606111-5606130 | Msa0392440:intron | 25.0% |
| ! | AAAGTATGAACAACTGATAA+GGG | + | chr3_2:5606112-5606131 | Msa0392440:intron | 25.0% |
| ! | CATCCAACACAAATAAAAAA+TGG | - | chr3_2:5606220-5606239 | None:intergenic | 25.0% |
| ! | AAAAAAGGGGGAAAAAAAAA+AGG | - | chr3_2:5606457-5606476 | None:intergenic | 25.0% |
| !! | TGATATGAATTTTCCATACT+AGG | - | chr3_2:5606492-5606511 | None:intergenic | 25.0% |
| ! | TTTACTTAGTGATACAATTC+TGG | + | chr3_2:5606617-5606636 | Msa0392440:intron | 25.0% |
| ! | ATAGAATTGCAAAAGATGAA+AGG | + | chr3_2:5607032-5607051 | Msa0392440:intron | 25.0% |
| !! | AAGAAAAATACCTGATTTGT+AGG | - | chr3_2:5607173-5607192 | None:intergenic | 25.0% |
| ! | TGTTTGGTACATCAAAAAAA+GGG | - | chr3_2:5607400-5607419 | None:intergenic | 25.0% |
| ! | ATGTTTGGTACATCAAAAAA+AGG | - | chr3_2:5607401-5607420 | None:intergenic | 25.0% |
| !! | CTTCAACATTTTATGAAACA+TGG | - | chr3_2:5607591-5607610 | None:intergenic | 25.0% |
| !!! | TTTGGATGGAATTATTTTTG+AGG | + | chr3_2:5607940-5607959 | Msa0392440:CDS | 25.0% |
| !!! | TATCTTTTGACTATAACTGA+TGG | + | chr3_2:5607963-5607982 | Msa0392440:intron | 25.0% |
| ! | ACTCATGCACAAAAAATTTA+AGG | - | chr3_2:5608549-5608568 | None:intergenic | 25.0% |
| ! | TTTATTTACACAATATCTGC+AGG | + | chr3_2:5608928-5608947 | Msa0392440:intron | 25.0% |
| !!! | GCTTTTTTGACCTATTATTT+TGG | + | chr3_2:5609022-5609041 | Msa0392440:intron | 25.0% |
| ! | CAAAATAAATAATGCAGCAT+TGG | - | chr3_2:5609385-5609404 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTGCAGGTATTTT+TGG | + | chr3_2:5609538-5609557 | Msa0392440:intron | 25.0% |
| !! | ATGCAGGGATTATTATATTT+TGG | + | chr3_2:5609732-5609751 | Msa0392440:three_prime_UTR | 25.0% |
| ! | GGATTTCTAATGAATTATTG+TGG | + | chr3_2:5609753-5609772 | Msa0392440:three_prime_UTR | 25.0% |
| !!! | ACATAAATGTTTTATTCAGC+TGG | + | chr3_2:5609782-5609801 | Msa0392440:three_prime_UTR | 25.0% |
| ! | TATGATCTTCTTCTTGTTGT+TGG | - | chr3_2:5603435-5603454 | None:intergenic | 30.0% |
| ! | AAATACGTTGGATTTGGAAT+CGG | - | chr3_2:5603518-5603537 | None:intergenic | 30.0% |
| TAGGAAAAATACGTTGGATT+TGG | - | chr3_2:5603524-5603543 | None:intergenic | 30.0% | |
| GTGAATTAGGAAAAATACGT+TGG | - | chr3_2:5603530-5603549 | None:intergenic | 30.0% | |
| AAATAAAGGAACGGTGAATT+AGG | - | chr3_2:5603543-5603562 | None:intergenic | 30.0% | |
| ACGTCAAATTAGATATGTGT+TGG | + | chr3_2:5603619-5603638 | Msa0392440:intron | 30.0% | |
| GGGTAAATACTTGAATTGAT+CGG | + | chr3_2:5603730-5603749 | Msa0392440:intron | 30.0% | |
| TTGAGAAAAAAACGATGAAG+AGG | - | chr3_2:5604007-5604026 | None:intergenic | 30.0% | |
| !!! | GAGAAAAAATGTCACTTTTG+GGG | - | chr3_2:5604252-5604271 | None:intergenic | 30.0% |
| GAGCAAAAAAATATCACTTG+TGG | + | chr3_2:5604285-5604304 | Msa0392440:intron | 30.0% | |
| GCAAAAAAATATCACTTGTG+GGG | + | chr3_2:5604287-5604306 | Msa0392440:intron | 30.0% | |
| ! | CTTTTACATGCAATGTGATA+TGG | + | chr3_2:5604485-5604504 | Msa0392440:intron | 30.0% |
| CATCACTGTTATCATCAAAT+TGG | + | chr3_2:5604607-5604626 | Msa0392440:intron | 30.0% | |
| !! | GACAGGTAAAAGTTATTTTC+TGG | + | chr3_2:5605055-5605074 | Msa0392440:intron | 30.0% |
| TCATCTATTGATCTTATGTG+AGG | + | chr3_2:5605118-5605137 | Msa0392440:intron | 30.0% | |
| CTAAATCTTATGGATCTTTC+TGG | - | chr3_2:5605393-5605412 | None:intergenic | 30.0% | |
| CAGAAAGATCCATAAGATTT+AGG | + | chr3_2:5605391-5605410 | Msa0392440:intron | 30.0% | |
| TAACATATAATGCATGTGCT+GGG | + | chr3_2:5605421-5605440 | Msa0392440:intron | 30.0% | |
| TTGACCAGATCAAATTATCA+AGG | - | chr3_2:5605605-5605624 | None:intergenic | 30.0% | |
| ! | CAACGTAACTAATTTAGAGT+GGG | - | chr3_2:5605739-5605758 | None:intergenic | 30.0% |
| TCAACGTAACTAATTTAGAG+TGG | - | chr3_2:5605740-5605759 | None:intergenic | 30.0% | |
| ATTTCAAATTTCATAGGTGG+TGG | + | chr3_2:5606150-5606169 | Msa0392440:intron | 30.0% | |
| CAACACAAATAAAAAATGGG+TGG | - | chr3_2:5606216-5606235 | None:intergenic | 30.0% | |
| !!! | CACCCATTTTTTATTTGTGT+TGG | + | chr3_2:5606214-5606233 | Msa0392440:intron | 30.0% |
| TATTTGTGTTGGATGCTATT+AGG | + | chr3_2:5606225-5606244 | Msa0392440:intron | 30.0% | |
| TTTGATCTACTTACAGCAAA+AGG | + | chr3_2:5606324-5606343 | Msa0392440:intron | 30.0% | |
| !!! | TTTTTTTCCCCCTTTTTTGT+TGG | + | chr3_2:5606459-5606478 | Msa0392440:intron | 30.0% |
| AGATAAGTTTCAGTTACTAC+TGG | + | chr3_2:5606542-5606561 | Msa0392440:intron | 30.0% | |
| GATAAGTTTCAGTTACTACT+GGG | + | chr3_2:5606543-5606562 | Msa0392440:intron | 30.0% | |
| AAGACAAAATTACACACCAA+GGG | - | chr3_2:5606593-5606612 | None:intergenic | 30.0% | |
| AAAGACAAAATTACACACCA+AGG | - | chr3_2:5606594-5606613 | None:intergenic | 30.0% | |
| !! | GATACAATTCTGGAACTAAA+TGG | + | chr3_2:5606627-5606646 | Msa0392440:intron | 30.0% |
| !!! | TTGGTTTTTTGTCTTGTGTT+TGG | + | chr3_2:5606654-5606673 | Msa0392440:intron | 30.0% |
| ATTGCAAAAGATGAAAGGTA+TGG | + | chr3_2:5607037-5607056 | Msa0392440:intron | 30.0% | |
| ! | TTGCAAAAGATGAAAGGTAT+GGG | + | chr3_2:5607038-5607057 | Msa0392440:intron | 30.0% |
| AACATATTTGGAAACATTCC+AGG | - | chr3_2:5607143-5607162 | None:intergenic | 30.0% | |
| ! | TTTCTTTTTGTTCCCAATTC+TGG | + | chr3_2:5607187-5607206 | Msa0392440:intron | 30.0% |
| TAGGGAAATCAATGCTAAAA+GGG | - | chr3_2:5607370-5607389 | None:intergenic | 30.0% | |
| TTAGGGAAATCAATGCTAAA+AGG | - | chr3_2:5607371-5607390 | None:intergenic | 30.0% | |
| CAAAAAAAGGGACAAAGTTA+GGG | - | chr3_2:5607388-5607407 | None:intergenic | 30.0% | |
| TCAAAAAAAGGGACAAAGTT+AGG | - | chr3_2:5607389-5607408 | None:intergenic | 30.0% | |
| ! | TTTTGATGTACCAAACATGT+AGG | + | chr3_2:5607403-5607422 | Msa0392440:intron | 30.0% |
| TCAAAATGATCTTTCCATGT+TGG | + | chr3_2:5607500-5607519 | Msa0392440:intron | 30.0% | |
| GACAAATAGGCAATTTAGAA+GGG | - | chr3_2:5607559-5607578 | None:intergenic | 30.0% | |
| TGACAAATAGGCAATTTAGA+AGG | - | chr3_2:5607560-5607579 | None:intergenic | 30.0% | |
| ATGGAAACTACATGACAAAT+AGG | - | chr3_2:5607572-5607591 | None:intergenic | 30.0% | |
| ! | GATTCTTGTGATTTGAGTTT+AGG | + | chr3_2:5607653-5607672 | Msa0392440:intron | 30.0% |
| ! | TTTGAGTTTAGGAAGCAATT+AGG | + | chr3_2:5607664-5607683 | Msa0392440:intron | 30.0% |
| !!! | AGTTTTGTTTGTGCTACTTT+TGG | + | chr3_2:5607729-5607748 | Msa0392440:intron | 30.0% |
| TAGTGAAAGATAGAGAAACA+GGG | + | chr3_2:5608293-5608312 | Msa0392440:intron | 30.0% | |
| AGCTCTCAATGGAATAAAAA+TGG | + | chr3_2:5608378-5608397 | Msa0392440:intron | 30.0% | |
| GCTCTCAATGGAATAAAAAT+GGG | + | chr3_2:5608379-5608398 | Msa0392440:intron | 30.0% | |
| ATTAAAATGCTCTCTTGTTC+AGG | - | chr3_2:5608463-5608482 | None:intergenic | 30.0% | |
| !! | GTATGGTGGGATTATTATTT+TGG | + | chr3_2:5608511-5608530 | Msa0392440:intron | 30.0% |
| GGAGAATGTAAGATTACAAA+AGG | - | chr3_2:5608802-5608821 | None:intergenic | 30.0% | |
| AGGAGTTTAATTCATATGCA+CGG | - | chr3_2:5609353-5609372 | None:intergenic | 30.0% | |
| GGAATGTCAGAAATTACTTA+TGG | + | chr3_2:5609420-5609439 | Msa0392440:intron | 30.0% | |
| ATACCTGCAAAAAAGAAAAC+AGG | - | chr3_2:5609535-5609554 | None:intergenic | 30.0% | |
| CTAATTGTGTTCTTGTTACT+TGG | + | chr3_2:5609685-5609704 | Msa0392440:exon | 30.0% | |
| AAAGAGAGAGACAGAGAAAA+TGG | + | chr3_2:5603375-5603394 | Msa0392440:exon | 35.0% | |
| AAGAGAGAGACAGAGAAAAT+GGG | + | chr3_2:5603376-5603395 | Msa0392440:exon | 35.0% | |
| GAATTGATCGGTGAAATTGT+AGG | + | chr3_2:5603742-5603761 | Msa0392440:intron | 35.0% | |
| GCACCAAATGTGATATTTGA+AGG | + | chr3_2:5604346-5604365 | Msa0392440:intron | 35.0% | |
| GGTCCTTCAAATATCACATT+TGG | - | chr3_2:5604352-5604371 | None:intergenic | 35.0% | |
| TTTGAATTGCTAGATGGTTG+TGG | + | chr3_2:5604456-5604475 | Msa0392440:intron | 35.0% | |
| !!! | TTGTTTGTTTTTTGGCAGCA+TGG | + | chr3_2:5604662-5604681 | Msa0392440:intron | 35.0% |
| GAGAGAAAAGGAGAGAAAAA+GGG | + | chr3_2:5604748-5604767 | Msa0392440:CDS | 35.0% | |
| AAAGGAGAGAAAAAGGGATA+AGG | + | chr3_2:5604754-5604773 | Msa0392440:CDS | 35.0% | |
| AAGGAGAGAAAAAGGGATAA+GGG | + | chr3_2:5604755-5604774 | Msa0392440:CDS | 35.0% | |
| ATAGTGAGAAAAGCAAAGAC+AGG | + | chr3_2:5604891-5604910 | Msa0392440:CDS | 35.0% | |
| TAGTGAGAAAAGCAAAGACA+GGG | + | chr3_2:5604892-5604911 | Msa0392440:CDS | 35.0% | |
| ! | TTGTTTGTTGGTATAGACGA+AGG | + | chr3_2:5605247-5605266 | Msa0392440:intron | 35.0% |
| ! | TGTTTGTTGGTATAGACGAA+GGG | + | chr3_2:5605248-5605267 | Msa0392440:intron | 35.0% |
| TAGTGCACACCTAAATCTTA+TGG | - | chr3_2:5605403-5605422 | None:intergenic | 35.0% | |
| CTAACATATAATGCATGTGC+TGG | + | chr3_2:5605420-5605439 | Msa0392440:intron | 35.0% | |
| TAATGTTGTGTGAATGCATG+TGG | + | chr3_2:5605517-5605536 | Msa0392440:intron | 35.0% | |
| TTGAGTCTTAACAGTGCTAT+TGG | + | chr3_2:5605848-5605867 | Msa0392440:intron | 35.0% | |
| ACACATACCAAGTTCTCAAA+AGG | - | chr3_2:5605874-5605893 | None:intergenic | 35.0% | |
| GTTCGAAGAACATTTACTGT+CGG | - | chr3_2:5605912-5605931 | None:intergenic | 35.0% | |
| CAAACATACTCAACACACAT+TGG | - | chr3_2:5605960-5605979 | None:intergenic | 35.0% | |
| CAATGTGTGTTGAGTATGTT+TGG | + | chr3_2:5605958-5605977 | Msa0392440:intron | 35.0% | |
| !!! | AAGGACTAGTGGTTTTGATA+TGG | + | chr3_2:5606343-5606362 | Msa0392440:CDS | 35.0% |
| ATCAACACCAACAAAAAAGG+GGG | - | chr3_2:5606469-5606488 | None:intergenic | 35.0% | |
| GATCAACACCAACAAAAAAG+GGG | - | chr3_2:5606470-5606489 | None:intergenic | 35.0% | |
| GGATCAACACCAACAAAAAA+GGG | - | chr3_2:5606471-5606490 | None:intergenic | 35.0% | |
| AGGATCAACACCAACAAAAA+AGG | - | chr3_2:5606472-5606491 | None:intergenic | 35.0% | |
| CATGGTCTTTACTGTTTACT+TGG | + | chr3_2:5606517-5606536 | Msa0392440:intron | 35.0% | |
| GGTATATAGCTCTTGAATAC+TGG | + | chr3_2:5606564-5606583 | Msa0392440:intron | 35.0% | |
| !! | TCTTGTCTTATGCTCTAAGA+AGG | + | chr3_2:5606699-5606718 | Msa0392440:intron | 35.0% |
| GACATAAAAGCTACAGATGT+CGG | - | chr3_2:5606769-5606788 | None:intergenic | 35.0% | |
| ! | ATCTGTAGCTTTTATGTCCA+AGG | + | chr3_2:5606771-5606790 | Msa0392440:intron | 35.0% |
| CTGGAAACTATTACCTACTT+CGG | + | chr3_2:5606838-5606857 | Msa0392440:intron | 35.0% | |
| ! | AAATACCTGATTTGTAGGCA+GGG | - | chr3_2:5607168-5607187 | None:intergenic | 35.0% |
| ! | AAAATACCTGATTTGTAGGC+AGG | - | chr3_2:5607169-5607188 | None:intergenic | 35.0% |
| GAAATCAATGCTAAAAGGGA+AGG | - | chr3_2:5607366-5607385 | None:intergenic | 35.0% | |
| TTCTCATTCATGAACCAACA+TGG | - | chr3_2:5607517-5607536 | None:intergenic | 35.0% | |
| !! | TGTTGGTTCATGAATGAGAA+TGG | + | chr3_2:5607517-5607536 | Msa0392440:intron | 35.0% |
| !!! | AGCTTTTTAGAGTATGTTGC+TGG | + | chr3_2:5607609-5607628 | Msa0392440:intron | 35.0% |
| TAGTTAAGTGAAGAACACGT+TGG | + | chr3_2:5607690-5607709 | Msa0392440:intron | 35.0% | |
| AACTTTCTTCAGTCAGGTTA+TGG | + | chr3_2:5607796-5607815 | Msa0392440:CDS | 35.0% | |
| !! | AGAGACGGATTATAATCAGT+AGG | - | chr3_2:5608085-5608104 | None:intergenic | 35.0% |
| !! | AGAGAGCTTTTAGAGACTTT+TGG | + | chr3_2:5608250-5608269 | Msa0392440:intron | 35.0% |
| CTAGTGAAAGATAGAGAAAC+AGG | + | chr3_2:5608292-5608311 | Msa0392440:intron | 35.0% | |
| TAGAGAAACAGGGAATTCAA+AGG | + | chr3_2:5608303-5608322 | Msa0392440:intron | 35.0% | |
| AGAGAAACAGGGAATTCAAA+GGG | + | chr3_2:5608304-5608323 | Msa0392440:intron | 35.0% | |
| ACTTATGTTACAACCAGCAT+TGG | + | chr3_2:5608609-5608628 | Msa0392440:CDS | 35.0% | |
| AACTTAGGCCTGATTCTTTA+GGG | - | chr3_2:5608824-5608843 | None:intergenic | 35.0% | |
| AAACTTAGGCCTGATTCTTT+AGG | - | chr3_2:5608825-5608844 | None:intergenic | 35.0% | |
| CACAATATCTGCAGGTAATT+TGG | + | chr3_2:5608936-5608955 | Msa0392440:intron | 35.0% | |
| TGCAGGTAATTTGGTTAATG+TGG | + | chr3_2:5608945-5608964 | Msa0392440:intron | 35.0% | |
| ! | ATTCTCTACTCTTTTGTCTC+TGG | + | chr3_2:5609047-5609066 | Msa0392440:intron | 35.0% |
| GTTTGTCCTTCAGGAAATAA+TGG | + | chr3_2:5609105-5609124 | Msa0392440:intron | 35.0% | |
| ATAAATTGGCATACTCGCTT+CGG | - | chr3_2:5609262-5609281 | None:intergenic | 35.0% | |
| GATGTGACAACACACATAAT+TGG | + | chr3_2:5609300-5609319 | Msa0392440:intron | 35.0% | |
| !! | AATAATGCAGCATTGGCAAT+AGG | - | chr3_2:5609378-5609397 | None:intergenic | 35.0% |
| !! | GAACCTGTTTTCTTTTTTGC+AGG | + | chr3_2:5609529-5609548 | Msa0392440:intron | 35.0% |
| GGACTGAATGGAAGAAAATT+TGG | + | chr3_2:5609599-5609618 | Msa0392440:CDS | 35.0% | |
| CTGAATGGAAGAAAATTTGG+TGG | + | chr3_2:5609602-5609621 | Msa0392440:CDS | 35.0% | |
| ATTAGAACAAATCCTCCATC+AGG | - | chr3_2:5609815-5609834 | None:intergenic | 35.0% | |
| AGATCTTCTTCATCAACAGG+TGG | - | chr3_2:5603493-5603512 | None:intergenic | 40.0% | |
| GTGAGATCTTCTTCATCAAC+AGG | - | chr3_2:5603496-5603515 | None:intergenic | 40.0% | |
| !!! | TGACCCTTTAGGGTTTTTGT+AGG | + | chr3_2:5603816-5603835 | Msa0392440:intron | 40.0% |
| CGTCCTACAAAAACCCTAAA+GGG | - | chr3_2:5603822-5603841 | None:intergenic | 40.0% | |
| TCGTCCTACAAAAACCCTAA+AGG | - | chr3_2:5603823-5603842 | None:intergenic | 40.0% | |
| GGACGAGAATTGCATTAAGT+TGG | + | chr3_2:5603837-5603856 | Msa0392440:intron | 40.0% | |
| ! | CTGGTAATTGGGTACTGTAT+TGG | + | chr3_2:5603947-5603966 | Msa0392440:intron | 40.0% |
| AACGATGAAGAGGATTCATC+AGG | - | chr3_2:5603997-5604016 | None:intergenic | 40.0% | |
| ! | TTCACATTTGAGACAACGCT+GGG | - | chr3_2:5604223-5604242 | None:intergenic | 40.0% |
| ! | ATTCACATTTGAGACAACGC+TGG | - | chr3_2:5604224-5604243 | None:intergenic | 40.0% |
| ATCCTCCAGAAGTAGAGAAA+AGG | + | chr3_2:5604712-5604731 | Msa0392440:CDS | 40.0% | |
| GGAGAGAAAAGGAGAGAAAA+AGG | + | chr3_2:5604747-5604766 | Msa0392440:CDS | 40.0% | |
| ATCGTAGTGAGAGAAAGGAA+AGG | + | chr3_2:5604987-5605006 | Msa0392440:CDS | 40.0% | |
| TCGTAGTGAGAGAAAGGAAA+GGG | + | chr3_2:5604988-5605007 | Msa0392440:CDS | 40.0% | |
| TGAGAGAAAGGAAAGGGTAA+GGG | + | chr3_2:5604994-5605013 | Msa0392440:CDS | 40.0% | |
| ! | ACTTTTACCTGTCATAGCCT+CGG | - | chr3_2:5605048-5605067 | None:intergenic | 40.0% |
| TCGATCTAGATCAAGGTCAA+GGG | + | chr3_2:5605311-5605330 | Msa0392440:CDS | 40.0% | |
| !!! | TCTTTCTGGGACTTACCTTT+TGG | - | chr3_2:5605379-5605398 | None:intergenic | 40.0% |
| ATAGTTAAAGGATATGCGCG+AGG | + | chr3_2:5605485-5605504 | Msa0392440:intron | 40.0% | |
| TAGTTAAAGGATATGCGCGA+GGG | + | chr3_2:5605486-5605505 | Msa0392440:intron | 40.0% | |
| TTGTGTGAATGCATGTGGAA+GGG | + | chr3_2:5605522-5605541 | Msa0392440:intron | 40.0% | |
| !!! | CTATTGGCCTTTTGAGAACT+TGG | + | chr3_2:5605864-5605883 | Msa0392440:intron | 40.0% |
| !!! | ATTTTGGAACTCCATGGACT+TGG | + | chr3_2:5606013-5606032 | Msa0392440:intron | 40.0% |
| AAGAGATACTTCCAAGTCCA+TGG | - | chr3_2:5606027-5606046 | None:intergenic | 40.0% | |
| !! | CAAATTTCATAGGTGGTGGA+AGG | + | chr3_2:5606154-5606173 | Msa0392440:intron | 40.0% |
| ACTTACAGCAAAAGGACTAG+TGG | + | chr3_2:5606332-5606351 | Msa0392440:intron | 40.0% | |
| !! | TGTTGGTGTTGATCCTAGTA+TGG | + | chr3_2:5606476-5606495 | Msa0392440:intron | 40.0% |
| !! | TCTTGAATACTGGTTTCCCT+TGG | + | chr3_2:5606574-5606593 | Msa0392440:intron | 40.0% |
| ! | TCTGGAACTAAATGGTGCTT+TGG | + | chr3_2:5606635-5606654 | Msa0392440:intron | 40.0% |
| !! | ATGCTCTAAGAAGGCAATGT+TGG | + | chr3_2:5606708-5606727 | Msa0392440:intron | 40.0% |
| !! | TGCTCTAAGAAGGCAATGTT+GGG | + | chr3_2:5606709-5606728 | Msa0392440:intron | 40.0% |
| ! | TGTAGCTTTTATGTCCAAGG+AGG | + | chr3_2:5606774-5606793 | Msa0392440:intron | 40.0% |
| ! | GGAATCAATGCACCTGTTTT+TGG | + | chr3_2:5606795-5606814 | Msa0392440:intron | 40.0% |
| !!! | ATCAATGCACCTGTTTTTGG+TGG | + | chr3_2:5606798-5606817 | Msa0392440:intron | 40.0% |
| !!! | TCAATGCACCTGTTTTTGGT+GGG | + | chr3_2:5606799-5606818 | Msa0392440:intron | 40.0% |
| ATTCGTAAGTCTACCGAAGT+AGG | - | chr3_2:5606854-5606873 | None:intergenic | 40.0% | |
| ! | AATACCTGATTTGTAGGCAG+GGG | - | chr3_2:5607167-5607186 | None:intergenic | 40.0% |
| ATTACCTGCTCATTAGCTGT+AGG | - | chr3_2:5607470-5607489 | None:intergenic | 40.0% | |
| AGTTGCAACTTTCTTCAGTC+AGG | + | chr3_2:5607790-5607809 | Msa0392440:CDS | 40.0% | |
| AGTCAGGTTATGGCTACAAT+TGG | + | chr3_2:5607806-5607825 | Msa0392440:CDS | 40.0% | |
| CAAAGGCAAACTTCTTGTCA+TGG | - | chr3_2:5607880-5607899 | None:intergenic | 40.0% | |
| TGACAAGAAGTTTGCCTTTG+TGG | + | chr3_2:5607880-5607899 | Msa0392440:CDS | 40.0% | |
| AGTTTGCCTTTGTGGAAATG+AGG | + | chr3_2:5607888-5607907 | Msa0392440:CDS | 40.0% | |
| AACAGACCTCATTTCCACAA+AGG | - | chr3_2:5607897-5607916 | None:intergenic | 40.0% | |
| ! | GATTAAGGTTTGGGTTAGGT+TGG | - | chr3_2:5608129-5608148 | None:intergenic | 40.0% |
| ACCTAACCCAAACCTTAATC+TGG | + | chr3_2:5608129-5608148 | Msa0392440:CDS | 40.0% | |
| CCTAACCCAAACCTTAATCT+GGG | + | chr3_2:5608130-5608149 | Msa0392440:CDS | 40.0% | |
| CTAAGCCCAGATTAAGGTTT+GGG | - | chr3_2:5608138-5608157 | None:intergenic | 40.0% | |
| ACTAAGCCCAGATTAAGGTT+TGG | - | chr3_2:5608139-5608158 | None:intergenic | 40.0% | |
| AACCTTAATCTGGGCTTAGT+TGG | + | chr3_2:5608139-5608158 | Msa0392440:CDS | 40.0% | |
| ! | TAGAGACTTTTGGTCCTCTT+CGG | + | chr3_2:5608260-5608279 | Msa0392440:intron | 40.0% |
| ! | ATGCTCTCTTGTTCAGGTTT+AGG | - | chr3_2:5608457-5608476 | None:intergenic | 40.0% |
| ! | TATGTTACAACCAGCATTGG+TGG | + | chr3_2:5608612-5608631 | Msa0392440:CDS | 40.0% |
| TCATCATCTTTGAGCTCATC+AGG | - | chr3_2:5608673-5608692 | None:intergenic | 40.0% | |
| TGATGAGCTCAAAGATGATG+AGG | + | chr3_2:5608672-5608691 | Msa0392440:CDS | 40.0% | |
| ! | GATTCTTGATGATATGCGAC+AGG | + | chr3_2:5608705-5608724 | Msa0392440:CDS | 40.0% |
| ACATTCTCCCCTAAAGAATC+AGG | + | chr3_2:5608813-5608832 | Msa0392440:intron | 40.0% | |
| ACTTAGGCCTGATTCTTTAG+GGG | - | chr3_2:5608823-5608842 | None:intergenic | 40.0% | |
| !! | AGGCTTTGAGTCTGAAACTT+AGG | - | chr3_2:5608839-5608858 | None:intergenic | 40.0% |
| TTTGTCTGTGTTTGTCCTTC+AGG | + | chr3_2:5609096-5609115 | Msa0392440:intron | 40.0% | |
| ATCACGCCATTATTTCCTGA+AGG | - | chr3_2:5609114-5609133 | None:intergenic | 40.0% | |
| TTGGAGTATGCTGATGTTGA+TGG | + | chr3_2:5609557-5609576 | Msa0392440:CDS | 40.0% | |
| TTCTTCCATTCAGTCCAGAA+CGG | - | chr3_2:5609595-5609614 | None:intergenic | 40.0% | |
| ! | TCCAGAGAACAAATTTGCTC+AGG | + | chr3_2:5609649-5609668 | Msa0392440:CDS | 40.0% |
| ! | CCAGAGAACAAATTTGCTCA+GGG | + | chr3_2:5609650-5609669 | Msa0392440:CDS | 40.0% |
| TCTTCTTCATCAACAGGTGG+TGG | - | chr3_2:5603490-5603509 | None:intergenic | 45.0% | |
| GCCAAAATTCACCACCATCT+GGG | + | chr3_2:5604309-5604328 | Msa0392440:intron | 45.0% | |
| !! | ACCCAGATGGTGGTGAATTT+TGG | - | chr3_2:5604313-5604332 | None:intergenic | 45.0% |
| AAATTCACCACCATCTGGGT+TGG | + | chr3_2:5604313-5604332 | Msa0392440:intron | 45.0% | |
| AATTCACCACCATCTGGGTT+GGG | + | chr3_2:5604314-5604333 | Msa0392440:intron | 45.0% | |
| AACTTTGATCCCAACCCAGA+TGG | - | chr3_2:5604326-5604345 | None:intergenic | 45.0% | |
| ! | CTCCTTTTCTCTACTTCTGG+AGG | - | chr3_2:5604717-5604736 | None:intergenic | 45.0% |
| CCAGAAGTAGAGAAAAGGAG+CGG | + | chr3_2:5604717-5604736 | Msa0392440:CDS | 45.0% | |
| CAGAAGTAGAGAAAAGGAGC+GGG | + | chr3_2:5604718-5604737 | Msa0392440:CDS | 45.0% | |
| AAAGGGATAAGGGAAGAGAC+AGG | + | chr3_2:5604765-5604784 | Msa0392440:CDS | 45.0% | |
| AAGGGATAAGGGAAGAGACA+GGG | + | chr3_2:5604766-5604785 | Msa0392440:CDS | 45.0% | |
| AAGAGACAGGGATAGAAGCA+GGG | + | chr3_2:5604778-5604797 | Msa0392440:CDS | 45.0% | |
| ATAGAAGCAGGGATAGGGAT+AGG | + | chr3_2:5604789-5604808 | Msa0392440:CDS | 45.0% | |
| TAGAAGCAGGGATAGGGATA+GGG | + | chr3_2:5604790-5604809 | Msa0392440:CDS | 45.0% | |
| ATAGGGATAGGGAGAAAAGC+AGG | + | chr3_2:5604801-5604820 | Msa0392440:CDS | 45.0% | |
| TAGGGATAGGGAGAAAAGCA+GGG | + | chr3_2:5604802-5604821 | Msa0392440:CDS | 45.0% | |
| GTGAGAGAAAGGAAAGGGTA+AGG | + | chr3_2:5604993-5605012 | Msa0392440:CDS | 45.0% | |
| GATGATTATCACAGAAGCCG+AGG | + | chr3_2:5605028-5605047 | Msa0392440:CDS | 45.0% | |
| ATGATCGAGAGGATAGGCAT+AGG | + | chr3_2:5605274-5605293 | Msa0392440:CDS | 45.0% | |
| ACCTTGATCTAGATCGAGAC+CGG | - | chr3_2:5605308-5605327 | None:intergenic | 45.0% | |
| CTCGATCTAGATCAAGGTCA+AGG | + | chr3_2:5605310-5605329 | Msa0392440:CDS | 45.0% | |
| CTCGATCTGAGCATAGATCA+AGG | + | chr3_2:5605334-5605353 | Msa0392440:CDS | 45.0% | |
| AGTTAAAGGATATGCGCGAG+GGG | + | chr3_2:5605487-5605506 | Msa0392440:intron | 45.0% | |
| GTTGTGTGAATGCATGTGGA+AGG | + | chr3_2:5605521-5605540 | Msa0392440:intron | 45.0% | |
| GTTACAATCACTGAGCAGCA+AGG | - | chr3_2:5606183-5606202 | None:intergenic | 45.0% | |
| !!! | GAACGTTGCTTTTCATGCAG+AGG | - | chr3_2:5606288-5606307 | None:intergenic | 45.0% |
| ACCCAATATCGCAGAAGTAG+GGG | - | chr3_2:5606372-5606391 | None:intergenic | 45.0% | |
| CACCCAATATCGCAGAAGTA+GGG | - | chr3_2:5606373-5606392 | None:intergenic | 45.0% | |
| GAACAAGACCCACCAAAAAC+AGG | - | chr3_2:5606810-5606829 | None:intergenic | 45.0% | |
| !! | GGGTCTTGTTCATCTTCAAC+TGG | + | chr3_2:5606819-5606838 | Msa0392440:intron | 45.0% |
| ! | CAACTGACTTCTGCTACAAC+TGG | - | chr3_2:5606997-5607016 | None:intergenic | 45.0% |
| ! | ATATGCCTTGCTGTACTTGC+AGG | + | chr3_2:5607089-5607108 | Msa0392440:intron | 45.0% |
| TACTTGCAGGTCAGATCTCT+GGG | + | chr3_2:5607102-5607121 | Msa0392440:intron | 45.0% | |
| GGAAACATTCCAGGAATAGC+AGG | - | chr3_2:5607134-5607153 | None:intergenic | 45.0% | |
| GTAGGCAGGGGAAACATATT+TGG | - | chr3_2:5607155-5607174 | None:intergenic | 45.0% | |
| TGTCCAGCAGAACCAGAATT+GGG | - | chr3_2:5607202-5607221 | None:intergenic | 45.0% | |
| TTGTCCAGCAGAACCAGAAT+TGG | - | chr3_2:5607203-5607222 | None:intergenic | 45.0% | |
| !! | AAGACAGGGAGAGCACTAAA+CGG | - | chr3_2:5607273-5607292 | None:intergenic | 45.0% |
| TGTTGTGTCATAGCCTGAAC+TGG | - | chr3_2:5607297-5607316 | None:intergenic | 45.0% | |
| AGTTCAGGCTATGACACAAC+AGG | + | chr3_2:5607296-5607315 | Msa0392440:CDS | 45.0% | |
| TGTCGTGTAGCCTACATGTT+TGG | - | chr3_2:5607416-5607435 | None:intergenic | 45.0% | |
| CAGGTTATGGCTACAATTGG+AGG | + | chr3_2:5607809-5607828 | Msa0392440:CDS | 45.0% | |
| ACATTCACAACTGCATCACC+TGG | - | chr3_2:5607848-5607867 | None:intergenic | 45.0% | |
| TGAAGAAGCCAGCAATGCAA+TGG | + | chr3_2:5607916-5607935 | Msa0392440:CDS | 45.0% | |
| ATCCAAAGCCATTGCATTGC+TGG | - | chr3_2:5607927-5607946 | None:intergenic | 45.0% | |
| !! | AGCAATGCAATGGCTTTGGA+TGG | + | chr3_2:5607926-5607945 | Msa0392440:CDS | 45.0% |
| ! | CCCAGATTAAGGTTTGGGTT+AGG | - | chr3_2:5608133-5608152 | None:intergenic | 45.0% |
| GTCCAACTAAGCCCAGATTA+AGG | - | chr3_2:5608144-5608163 | None:intergenic | 45.0% | |
| ! | GGTCCTGATCGGATTTTTGT+TGG | + | chr3_2:5608193-5608212 | Msa0392440:CDS | 45.0% |
| CCACCAACAAAAATCCGATC+AGG | - | chr3_2:5608199-5608218 | None:intergenic | 45.0% | |
| ! | CCTGATCGGATTTTTGTTGG+TGG | + | chr3_2:5608196-5608215 | Msa0392440:intron | 45.0% |
| ! | AGAGACTTTTGGTCCTCTTC+GGG | + | chr3_2:5608261-5608280 | Msa0392440:intron | 45.0% |
| ACTAGATCAAAACCCCGAAG+AGG | - | chr3_2:5608277-5608296 | None:intergenic | 45.0% | |
| TATTCCATTGAGAGCTGCAC+AGG | - | chr3_2:5608374-5608393 | None:intergenic | 45.0% | |
| ! | GTTCAGGTTTAGGCTGCATT+GGG | - | chr3_2:5608447-5608466 | None:intergenic | 45.0% |
| ! | TGTTCAGGTTTAGGCTGCAT+TGG | - | chr3_2:5608448-5608467 | None:intergenic | 45.0% |
| CGACAGGAATGCTCCAAATT+TGG | + | chr3_2:5608721-5608740 | Msa0392440:CDS | 45.0% | |
| AGCAAACCTTTCCAACTCCA+GGG | - | chr3_2:5609005-5609024 | None:intergenic | 45.0% | |
| AAGCAAACCTTTCCAACTCC+AGG | - | chr3_2:5609006-5609025 | None:intergenic | 45.0% | |
| !! | TGCAGCATTGGCAATAGGAA+AGG | - | chr3_2:5609373-5609392 | None:intergenic | 45.0% |
| TCTTCCATTCAGTCCAGAAC+GGG | - | chr3_2:5609594-5609613 | None:intergenic | 45.0% | |
| ! | CCCTGAGCAAATTTGTTCTC+TGG | - | chr3_2:5609653-5609672 | None:intergenic | 45.0% |
| TTTGCTCAGGGCGATTATGA+AGG | + | chr3_2:5609662-5609681 | Msa0392440:CDS | 45.0% | |
| !!! | AATTAAAATTTGAAATTTTA+GGG | - | chr3_2:5603784-5603803 | None:intergenic | 5.0% |
| !!! | AAATTAAAATTTGAAATTTT+AGG | - | chr3_2:5603785-5603804 | None:intergenic | 5.0% |
| !!! | CTTAAAATTTTAAAATTATT+AGG | - | chr3_2:5605697-5605716 | None:intergenic | 5.0% |
| ! | TCTTCATCAACAGGTGGTGG+TGG | - | chr3_2:5603487-5603506 | None:intergenic | 50.0% |
| GGCCAAAATTCACCACCATC+TGG | + | chr3_2:5604308-5604327 | Msa0392440:intron | 50.0% | |
| TTTGATCCCAACCCAGATGG+TGG | - | chr3_2:5604323-5604342 | None:intergenic | 50.0% | |
| ! | CCGCTCCTTTTCTCTACTTC+TGG | - | chr3_2:5604720-5604739 | None:intergenic | 50.0% |
| AGAGAAAAGGAGCGGGAGAA+TGG | + | chr3_2:5604725-5604744 | Msa0392440:CDS | 50.0% | |
| GAGAAAAGGAGCGGGAGAAT+GGG | + | chr3_2:5604726-5604745 | Msa0392440:CDS | 50.0% | |
| GAAGAGACAGGGATAGAAGC+AGG | + | chr3_2:5604777-5604796 | Msa0392440:CDS | 50.0% | |
| ACAGGGATAGAAGCAGGGAT+AGG | + | chr3_2:5604783-5604802 | Msa0392440:CDS | 50.0% | |
| CAGGGATAGAAGCAGGGATA+GGG | + | chr3_2:5604784-5604803 | Msa0392440:CDS | 50.0% | |
| ACAGAGAGAGTGAGAGAAGC+AGG | + | chr3_2:5604825-5604844 | Msa0392440:CDS | 50.0% | |
| CAGAGAGAGTGAGAGAAGCA+GGG | + | chr3_2:5604826-5604845 | Msa0392440:CDS | 50.0% | |
| TCAGAGATAGGGAGAGAAGC+AGG | + | chr3_2:5604855-5604874 | Msa0392440:CDS | 50.0% | |
| CAGAGATAGGGAGAGAAGCA+GGG | + | chr3_2:5604856-5604875 | Msa0392440:CDS | 50.0% | |
| CTCTATGATGGTCACGGTCA+CGG | - | chr3_2:5604955-5604974 | None:intergenic | 50.0% | |
| GGCGATCTCTATGATGGTCA+CGG | - | chr3_2:5604961-5604980 | None:intergenic | 50.0% | |
| ACCATCATAGAGATCGCCAC+AGG | + | chr3_2:5604963-5604982 | Msa0392440:CDS | 50.0% | |
| CCATCATAGAGATCGCCACA+GGG | + | chr3_2:5604964-5604983 | Msa0392440:CDS | 50.0% | |
| TTCTCTCACTACGATCCCTG+TGG | - | chr3_2:5604982-5605001 | None:intergenic | 50.0% | |
| CAGGGATCGTAGTGAGAGAA+AGG | + | chr3_2:5604982-5605001 | Msa0392440:CDS | 50.0% | |
| ! | ACGAAGGGAGTATGATCGAG+AGG | + | chr3_2:5605263-5605282 | Msa0392440:CDS | 50.0% |
| ! | GGGAGTATGATCGAGAGGAT+AGG | + | chr3_2:5605268-5605287 | Msa0392440:CDS | 50.0% |
| GAGAGGATAGGCATAGGAGT+AGG | + | chr3_2:5605280-5605299 | Msa0392440:CDS | 50.0% | |
| GTTCTCGTTCACGCTCCAAA+AGG | + | chr3_2:5605361-5605380 | Msa0392440:CDS | 50.0% | |
| !! | CGACTGGAACAACTTGTTGC+AGG | - | chr3_2:5605934-5605953 | None:intergenic | 50.0% |
| CAACACACATTGGACTCGAC+TGG | - | chr3_2:5605950-5605969 | None:intergenic | 50.0% | |
| TCCCCCTACTTCTGCGATAT+TGG | + | chr3_2:5606367-5606386 | Msa0392440:CDS | 50.0% | |
| CCCAATATCGCAGAAGTAGG+GGG | - | chr3_2:5606371-5606390 | None:intergenic | 50.0% | |
| CCCCCTACTTCTGCGATATT+GGG | + | chr3_2:5606368-5606387 | Msa0392440:CDS | 50.0% | |
| GCACCCAATATCGCAGAAGT+AGG | - | chr3_2:5606374-5606393 | None:intergenic | 50.0% | |
| ! | TCTGCGATATTGGGTGCTAC+TGG | + | chr3_2:5606377-5606396 | Msa0392440:CDS | 50.0% |
| !! | CAGGTGCATTGATTCCTCCT+TGG | - | chr3_2:5606791-5606810 | None:intergenic | 50.0% |
| TCTGACCTGCAAGTACAGCA+AGG | - | chr3_2:5607097-5607116 | None:intergenic | 50.0% | |
| GTACTTGCAGGTCAGATCTC+TGG | + | chr3_2:5607101-5607120 | Msa0392440:intron | 50.0% | |
| ACTTGCAGGTCAGATCTCTG+GGG | + | chr3_2:5607103-5607122 | Msa0392440:intron | 50.0% | |
| GTTTCCCCTGCCTACAAATC+AGG | + | chr3_2:5607160-5607179 | Msa0392440:CDS | 50.0% | |
| !! | GTTCCCAATTCTGGTTCTGC+TGG | + | chr3_2:5607196-5607215 | Msa0392440:intron | 50.0% |
| TAGCCTGAACTGGCAAGACA+GGG | - | chr3_2:5607287-5607306 | None:intergenic | 50.0% | |
| ATAGCCTGAACTGGCAAGAC+AGG | - | chr3_2:5607288-5607307 | None:intergenic | 50.0% | |
| AGGCTACACGACATGCTAGA+CGG | + | chr3_2:5607423-5607442 | Msa0392440:intron | 50.0% | |
| CATGCTAGACGGGTGTATGT+TGG | + | chr3_2:5607434-5607453 | Msa0392440:CDS | 50.0% | |
| GCTCATTAGCTGTAGGAGAG+AGG | - | chr3_2:5607463-5607482 | None:intergenic | 50.0% | |
| CTCTCCTACAGCTAATGAGC+AGG | + | chr3_2:5607463-5607482 | Msa0392440:CDS | 50.0% | |
| ACAATTGGAGGAAACACCGC+TGG | + | chr3_2:5607821-5607840 | Msa0392440:CDS | 50.0% | |
| AGCCAGCAATGCAATGGCTT+TGG | + | chr3_2:5607922-5607941 | Msa0392440:CDS | 50.0% | |
| AATTCAGGGTGCACCAGTGA+AGG | + | chr3_2:5608051-5608070 | Msa0392440:intron | 50.0% | |
| !! | AGGTTTGGGTTAGGTTGGCT+TGG | - | chr3_2:5608124-5608143 | None:intergenic | 50.0% |
| GGCTTAGTTGGACTATCACC+TGG | + | chr3_2:5608151-5608170 | Msa0392440:CDS | 50.0% | |
| ! | GAGACTTTTGGTCCTCTTCG+GGG | + | chr3_2:5608262-5608281 | Msa0392440:intron | 50.0% |
| ATTGCCTGTGCAGCTCTCAA+TGG | + | chr3_2:5608367-5608386 | Msa0392440:intron | 50.0% | |
| AGCAGATTGCTCTGCAGGTA+TGG | + | chr3_2:5608494-5608513 | Msa0392440:intron | 50.0% | |
| AGATTGCTCTGCAGGTATGG+TGG | + | chr3_2:5608497-5608516 | Msa0392440:intron | 50.0% | |
| GATTGCTCTGCAGGTATGGT+GGG | + | chr3_2:5608498-5608517 | Msa0392440:intron | 50.0% | |
| !! | ACCAGCATTGGTGGCAACAA+AGG | + | chr3_2:5608621-5608640 | Msa0392440:CDS | 50.0% |
| ACCTTTGTTGCCACCAATGC+TGG | - | chr3_2:5608625-5608644 | None:intergenic | 50.0% | |
| ! | ATTCAGTCCAGAACGGGCTT+TGG | - | chr3_2:5609588-5609607 | None:intergenic | 50.0% |
| ! | AAAGCCCGTTCTGGACTGAA+TGG | + | chr3_2:5609587-5609606 | Msa0392440:CDS | 50.0% |
| TCAGCTGGAATAGCACCTGA+TGG | + | chr3_2:5609797-5609816 | Msa0392440:three_prime_UTR | 50.0% | |
| !! | TCATCAACAGGTGGTGGTGG+TGG | - | chr3_2:5603484-5603503 | None:intergenic | 55.0% |
| GCGGGAGAATGGGAGAGAAA+AGG | + | chr3_2:5604736-5604755 | Msa0392440:CDS | 55.0% | |
| AGAGTGAGAGAAGCAGGGAC+AGG | + | chr3_2:5604831-5604850 | Msa0392440:CDS | 55.0% | |
| GAGTGAGAGAAGCAGGGACA+GGG | + | chr3_2:5604832-5604851 | Msa0392440:CDS | 55.0% | |
| CAGGGACAGGGTCAGAGATA+GGG | + | chr3_2:5604844-5604863 | Msa0392440:CDS | 55.0% | |
| ATAGGGAGAGAAGCAGGGAC+AGG | + | chr3_2:5604861-5604880 | Msa0392440:CDS | 55.0% | |
| TAGGGAGAGAAGCAGGGACA+GGG | + | chr3_2:5604862-5604881 | Msa0392440:CDS | 55.0% | |
| GCAAAGACAGGGAACGCGAT+CGG | + | chr3_2:5604903-5604922 | Msa0392440:CDS | 55.0% | |
| CAAAGACAGGGAACGCGATC+GGG | + | chr3_2:5604904-5604923 | Msa0392440:CDS | 55.0% | |
| ATCGGGATGGGGAGAAGGAA+AGG | + | chr3_2:5604921-5604940 | Msa0392440:CDS | 55.0% | |
| TCGGGATGGGGAGAAGGAAA+GGG | + | chr3_2:5604922-5604941 | Msa0392440:CDS | 55.0% | |
| ATGGGGAGAAGGAAAGGGAG+AGG | + | chr3_2:5604927-5604946 | Msa0392440:CDS | 55.0% | |
| TGGGGAGAAGGAAAGGGAGA+GGG | + | chr3_2:5604928-5604947 | Msa0392440:CDS | 55.0% | |
| CCCTGTGGCGATCTCTATGA+TGG | - | chr3_2:5604967-5604986 | None:intergenic | 55.0% | |
| ACAGAAGCCGAGGCTATGAC+AGG | + | chr3_2:5605038-5605057 | Msa0392440:CDS | 55.0% | |
| ATAGGCATAGGAGTAGGCGC+CGG | + | chr3_2:5605286-5605305 | Msa0392440:CDS | 55.0% | |
| GCCGGTCTCGATCTAGATCA+AGG | + | chr3_2:5605304-5605323 | Msa0392440:CDS | 55.0% | |
| !! | TTGGGTGCTACTGGTGTTGC+AGG | + | chr3_2:5606386-5606405 | Msa0392440:CDS | 55.0% |
| ! | TAGCCCCACTGTGCTGACAA+TGG | + | chr3_2:5606736-5606755 | Msa0392440:intron | 55.0% |
| ! | AGCCCCACTGTGCTGACAAT+GGG | + | chr3_2:5606737-5606756 | Msa0392440:intron | 55.0% |
| ACGCCCATTGTCAGCACAGT+GGG | - | chr3_2:5606743-5606762 | None:intergenic | 55.0% | |
| TCTCCCTGTCTTGCCAGTTC+AGG | + | chr3_2:5607281-5607300 | Msa0392440:CDS | 55.0% | |
| GGCTACACGACATGCTAGAC+GGG | + | chr3_2:5607424-5607443 | Msa0392440:intron | 55.0% | |
| GCTAGACGGGTGTATGTTGG+TGG | + | chr3_2:5607437-5607456 | Msa0392440:CDS | 55.0% | |
| AACTGCATCACCTGGACCAG+CGG | - | chr3_2:5607840-5607859 | None:intergenic | 55.0% | |
| GTAGGTCTCCTGACCTTCAC+TGG | - | chr3_2:5608067-5608086 | None:intergenic | 55.0% | |
| !! | GTTAGGTTGGCTTGGCCCTA+GGG | - | chr3_2:5608116-5608135 | None:intergenic | 55.0% |
| !! | GACTATCACCTGGCTCTGCT+GGG | + | chr3_2:5608161-5608180 | Msa0392440:CDS | 55.0% |
| !! | ACTATCACCTGGCTCTGCTG+GGG | + | chr3_2:5608162-5608181 | Msa0392440:CDS | 55.0% |
| ! | GGGGACTTGATGGTCCTGAT+CGG | + | chr3_2:5608182-5608201 | Msa0392440:CDS | 55.0% |
| ACAGCAGCAGATTGCTCTGC+AGG | + | chr3_2:5608489-5608508 | Msa0392440:CDS | 55.0% | |
| ACAGTTCACCATCAGGCCGT+GGG | - | chr3_2:5608981-5609000 | None:intergenic | 55.0% | |
| ACTGTGCCCTGGAGTTGGAA+AGG | + | chr3_2:5608996-5609015 | Msa0392440:CDS | 55.0% | |
| GGTTCTACCAAAGCCCGTTC+TGG | + | chr3_2:5609578-5609597 | Msa0392440:CDS | 55.0% | |
| GCTGGAATAGCACCTGATGG+AGG | + | chr3_2:5609800-5609819 | Msa0392440:three_prime_UTR | 55.0% | |
| !! | TCAACAGGTGGTGGTGGTGG+TGG | - | chr3_2:5603481-5603500 | None:intergenic | 60.0% |
| GCAGGGACAGGGTCAGAGAT+AGG | + | chr3_2:5604843-5604862 | Msa0392440:CDS | 60.0% | |
| AGGGAGAGAAGCAGGGACAG+GGG | + | chr3_2:5604863-5604882 | Msa0392440:CDS | 60.0% | |
| ACAGGGAACGCGATCGGGAT+GGG | + | chr3_2:5604909-5604928 | Msa0392440:CDS | 60.0% | |
| AAGGATATGCGCGAGGGGAC+TGG | + | chr3_2:5605492-5605511 | Msa0392440:intron | 60.0% | |
| CGCCCATTGTCAGCACAGTG+GGG | - | chr3_2:5606742-5606761 | None:intergenic | 60.0% | |
| CACGCCCATTGTCAGCACAG+TGG | - | chr3_2:5606744-5606763 | None:intergenic | 60.0% | |
| GGGGCAAGTCCTGCTATTCC+TGG | + | chr3_2:5607122-5607141 | Msa0392440:CDS | 60.0% | |
| AGGGTGCACCAGTGAAGGTC+AGG | + | chr3_2:5608056-5608075 | Msa0392440:intron | 60.0% | |
| CCTAGGGCAGCAGCTAGAGA+CGG | - | chr3_2:5608100-5608119 | None:intergenic | 60.0% | |
| CGTCTCTAGCTGCTGCCCTA+GGG | + | chr3_2:5608098-5608117 | Msa0392440:CDS | 60.0% | |
| !! | GGTTAGGTTGGCTTGGCCCT+AGG | - | chr3_2:5608117-5608136 | None:intergenic | 60.0% |
| !! | GGACTATCACCTGGCTCTGC+TGG | + | chr3_2:5608160-5608179 | Msa0392440:CDS | 60.0% |
| !! | CTATCACCTGGCTCTGCTGG+GGG | + | chr3_2:5608163-5608182 | Msa0392440:CDS | 60.0% |
| ATGTGGTGATCCCTCGCCCA+CGG | + | chr3_2:5608962-5608981 | Msa0392440:CDS | 60.0% | |
| CACAGTTCACCATCAGGCCG+TGG | - | chr3_2:5608982-5609001 | None:intergenic | 60.0% | |
| CCAGGGCACAGTTCACCATC+AGG | - | chr3_2:5608988-5609007 | None:intergenic | 60.0% | |
| ! | CCTGATGGTGAACTGTGCCC+TGG | + | chr3_2:5608985-5609004 | Msa0392440:CDS | 60.0% |
| GGTGAACTGTGCCCTGGAGT+TGG | + | chr3_2:5608991-5609010 | Msa0392440:CDS | 60.0% | |
| !! | GGTGGTGGTGGTGGTGGTTG+TGG | - | chr3_2:5603475-5603494 | None:intergenic | 65.0% |
| GACAGGGAACGCGATCGGGA+TGG | + | chr3_2:5604908-5604927 | Msa0392440:CDS | 65.0% | |
| CAGGGAACGCGATCGGGATG+GGG | + | chr3_2:5604910-5604929 | Msa0392440:CDS | 65.0% | |
| ACGCGATCGGGATGGGGAGA+AGG | + | chr3_2:5604916-5604935 | Msa0392440:CDS | 65.0% | |
| GGAGGAAACACCGCTGGTCC+AGG | + | chr3_2:5607827-5607846 | Msa0392440:CDS | 65.0% | |
| CCGTCTCTAGCTGCTGCCCT+AGG | + | chr3_2:5608097-5608116 | Msa0392440:CDS | 65.0% | |
| TCAAGTCCCCCAGCAGAGCC+AGG | - | chr3_2:5608172-5608191 | None:intergenic | 65.0% | |
| GGCTCTGCTGGGGGACTTGA+TGG | + | chr3_2:5608172-5608191 | Msa0392440:CDS | 65.0% | |
| ATCCCTCGCCCACGGCCTGA+TGG | + | chr3_2:5608970-5608989 | Msa0392440:CDS | 70.0% | |
| CACCATCAGGCCGTGGGCGA+GGG | - | chr3_2:5608975-5608994 | None:intergenic | 70.0% | |
| TCACCATCAGGCCGTGGGCG+AGG | - | chr3_2:5608976-5608995 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 5603322 | 5609891 | 5603322 | ID=Msa0392440;Name=Msa0392440 |
| chr3_2 | mRNA | 5603322 | 5609891 | 5603322 | ID=Msa0392440-mRNA-1;Parent=Msa0392440;Name=Msa0392440-mRNA-1;_AED=0.23;_eAED=0.23;_QI=72|0.91|0.84|1|1|1|13|203|551 |
| chr3_2 | exon | 5603322 | 5603531 | 5603322 | ID=Msa0392440-mRNA-1:exon:1399;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5604680 | 5605059 | 5604680 | ID=Msa0392440-mRNA-1:exon:1400;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5605263 | 5605382 | 5605263 | ID=Msa0392440-mRNA-1:exon:1401;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5606340 | 5606407 | 5606340 | ID=Msa0392440-mRNA-1:exon:1402;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5607111 | 5607181 | 5607111 | ID=Msa0392440-mRNA-1:exon:1403;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5607264 | 5607317 | 5607264 | ID=Msa0392440-mRNA-1:exon:1404;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5607425 | 5607484 | 5607425 | ID=Msa0392440-mRNA-1:exon:1405;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5607788 | 5607961 | 5607788 | ID=Msa0392440-mRNA-1:exon:1406;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5608058 | 5608214 | 5608058 | ID=Msa0392440-mRNA-1:exon:1407;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5608419 | 5608510 | 5608419 | ID=Msa0392440-mRNA-1:exon:1408;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5608607 | 5608742 | 5608607 | ID=Msa0392440-mRNA-1:exon:1409;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5608950 | 5609017 | 5608950 | ID=Msa0392440-mRNA-1:exon:1410;Parent=Msa0392440-mRNA-1 |
| chr3_2 | exon | 5609551 | 5609891 | 5609551 | ID=Msa0392440-mRNA-1:exon:1411;Parent=Msa0392440-mRNA-1 |
| chr3_2 | five_prime_UTR | 5603322 | 5603393 | 5603322 | ID=Msa0392440-mRNA-1:five_prime_utr;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5603394 | 5603531 | 5603394 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5604680 | 5605059 | 5604680 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5605263 | 5605382 | 5605263 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5606340 | 5606407 | 5606340 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5607111 | 5607181 | 5607111 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5607264 | 5607317 | 5607264 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5607425 | 5607484 | 5607425 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5607788 | 5607961 | 5607788 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5608058 | 5608214 | 5608058 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5608419 | 5608510 | 5608419 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5608607 | 5608742 | 5608607 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5608950 | 5609017 | 5608950 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | CDS | 5609551 | 5609688 | 5609551 | ID=Msa0392440-mRNA-1:cds;Parent=Msa0392440-mRNA-1 |
| chr3_2 | three_prime_UTR | 5609689 | 5609891 | 5609689 | ID=Msa0392440-mRNA-1:three_prime_utr;Parent=Msa0392440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
