Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699530 | XP_039684528.1 | 96.934 | 587 | 1 | 4 | 4 | 573 | 5 | 591 | 0.0 | 1157 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699530 | sp|Q9ZPS7|TMN3_ARATH | 86.348 | 586 | 62 | 5 | 5 | 573 | 8 | 592 | 0.0 | 1005 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699530 | A0A396GMP8 | 96.934 | 587 | 1 | 4 | 4 | 573 | 5 | 591 | 0.0 | 1157 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa0699530 | -0.821318 | 4.302895e-53 | -8.615850e-47 |
| Msa0008850 | Msa0699530 | -0.839499 | 1.527743e-57 | -8.615850e-47 |
| Msa0020630 | Msa0699530 | -0.851226 | 1.018794e-60 | -8.615850e-47 |
| Msa0023830 | Msa0699530 | 0.815988 | 6.970238e-52 | -8.615850e-47 |
| Msa0027540 | Msa0699530 | -0.834832 | 2.385535e-56 | -8.615850e-47 |
| Msa0030730 | Msa0699530 | -0.808296 | 3.320350e-50 | -8.615850e-47 |
| Msa0034560 | Msa0699530 | 0.819702 | 1.010732e-52 | -8.615850e-47 |
| Msa0038350 | Msa0699530 | 0.809294 | 2.031375e-50 | -8.615850e-47 |
| Msa0044240 | Msa0699530 | 0.806321 | 8.707726e-50 | -8.615850e-47 |
| Msa0044710 | Msa0699530 | -0.811624 | 6.379931e-51 | -8.615850e-47 |
| Msa0047470 | Msa0699530 | -0.802148 | 6.436483e-49 | -8.615850e-47 |
| Msa0061600 | Msa0699530 | 0.827670 | 1.376373e-54 | -8.615850e-47 |
| Msa0068410 | Msa0699530 | -0.824161 | 9.374755e-54 | -8.615850e-47 |
| Msa0075310 | Msa0699530 | -0.834381 | 3.096884e-56 | -8.615850e-47 |
| Msa0079250 | Msa0699530 | -0.804394 | 2.206142e-49 | -8.615850e-47 |
| Msa0084680 | Msa0699530 | -0.833387 | 5.490422e-56 | -8.615850e-47 |
| Msa0090770 | Msa0699530 | 0.808515 | 2.982537e-50 | -8.615850e-47 |
| Msa0091770 | Msa0699530 | -0.805261 | 1.453666e-49 | -8.615850e-47 |
| Msa0092660 | Msa0699530 | -0.813896 | 2.028992e-51 | -8.615850e-47 |
| Msa0092680 | Msa0699530 | -0.807270 | 5.485699e-50 | -8.615850e-47 |
| Msa0092730 | Msa0699530 | -0.815986 | 6.979269e-52 | -8.615850e-47 |
| Msa0101060 | Msa0699530 | -0.807844 | 4.145170e-50 | -8.615850e-47 |
| Msa0106130 | Msa0699530 | 0.805731 | 1.158516e-49 | -8.615850e-47 |
| Msa0114250 | Msa0699530 | -0.800803 | 1.214092e-48 | -8.615850e-47 |
| Msa0604700 | Msa0699530 | -0.826721 | 2.322012e-54 | -8.615850e-47 |
| Msa0607300 | Msa0699530 | -0.808207 | 3.469767e-50 | -8.615850e-47 |
| Msa0607340 | Msa0699530 | 0.804457 | 2.140846e-49 | -8.615850e-47 |
| Msa0619330 | Msa0699530 | -0.829874 | 4.032242e-55 | -8.615850e-47 |
| Msa0620640 | Msa0699530 | -0.808445 | 3.086869e-50 | -8.615850e-47 |
| Msa0621890 | Msa0699530 | -0.811968 | 5.369901e-51 | -8.615850e-47 |
| Msa0634510 | Msa0699530 | 0.823408 | 1.407825e-53 | -8.615850e-47 |
| Msa0645820 | Msa0699530 | -0.814497 | 1.495220e-51 | -8.615850e-47 |
| Msa0647000 | Msa0699530 | -0.826595 | 2.488955e-54 | -8.615850e-47 |
| Msa0647450 | Msa0699530 | 0.826020 | 3.411248e-54 | -8.615850e-47 |
| Msa0655660 | Msa0699530 | 0.902818 | 6.570072e-79 | -8.615850e-47 |
| Msa0657670 | Msa0699530 | -0.808496 | 3.010358e-50 | -8.615850e-47 |
| Msa0659040 | Msa0699530 | -0.800206 | 1.606743e-48 | -8.615850e-47 |
| Msa0660880 | Msa0699530 | 0.839734 | 1.327143e-57 | -8.615850e-47 |
| Msa0667970 | Msa0699530 | -0.822409 | 2.406010e-53 | -8.615850e-47 |
| Msa0674220 | Msa0699530 | -0.801997 | 6.913933e-49 | -8.615850e-47 |
| Msa0676690 | Msa0699530 | 0.817483 | 3.221049e-52 | -8.615850e-47 |
| Msa0681890 | Msa0699530 | -0.816294 | 5.957212e-52 | -8.615850e-47 |
| Msa0684590 | Msa0699530 | 0.800511 | 1.392619e-48 | -8.615850e-47 |
| Msa0685540 | Msa0699530 | -0.814002 | 1.923353e-51 | -8.615850e-47 |
| Msa0690350 | Msa0699530 | -0.810570 | 1.079223e-50 | -8.615850e-47 |
| Msa0699530 | Msa0701840 | 0.840682 | 7.503961e-58 | -8.615850e-47 |
| Msa0699530 | Msa0704220 | -0.806717 | 7.184504e-50 | -8.615850e-47 |
| Msa0699530 | Msa0704470 | 0.809814 | 1.570634e-50 | -8.615850e-47 |
| Msa0699530 | Msa0707780 | -0.821555 | 3.793306e-53 | -8.615850e-47 |
| Msa0699530 | Msa0714600 | -0.840460 | 8.579171e-58 | -8.615850e-47 |
| Msa0699530 | Msa0716740 | 0.823401 | 1.412604e-53 | -8.615850e-47 |
| Msa0699530 | Msa0722930 | -0.805263 | 1.452651e-49 | -8.615850e-47 |
| Msa0699530 | Msa0724050 | -0.805886 | 1.074866e-49 | -8.615850e-47 |
| Msa0699530 | Msa0726610 | -0.812751 | 3.620816e-51 | -8.615850e-47 |
| Msa0699530 | Msa0730180 | -0.818616 | 1.786487e-52 | -8.615850e-47 |
| Msa0699530 | Msa0733000 | -0.812334 | 4.468128e-51 | -8.615850e-47 |
| Msa0699530 | Msa0743640 | -0.809101 | 2.234443e-50 | -8.615850e-47 |
| Msa0699530 | Msa0743650 | -0.810749 | 9.874327e-51 | -8.615850e-47 |
| Msa0699530 | Msa0757990 | 0.827248 | 1.737541e-54 | -8.615850e-47 |
| Msa0699530 | Msa0763880 | -0.800518 | 1.387860e-48 | -8.615850e-47 |
| Msa0699530 | Msa0770430 | -0.827830 | 1.259293e-54 | -8.615850e-47 |
| Msa0699530 | Msa0789280 | -0.801169 | 1.022341e-48 | -8.615850e-47 |
| Msa0699530 | Msa0790390 | 0.806328 | 8.675855e-50 | -8.615850e-47 |
| Msa0699530 | Msa0799290 | 0.823197 | 1.576443e-53 | -8.615850e-47 |
| Msa0699530 | Msa0811510 | -0.826028 | 3.396462e-54 | -8.615850e-47 |
| Msa0699530 | Msa0828570 | -0.804615 | 1.983759e-49 | -8.615850e-47 |
| Msa0699530 | Msa0837510 | 0.822894 | 1.855508e-53 | -8.615850e-47 |
| Msa0699530 | Msa0837990 | -0.821008 | 5.072554e-53 | -8.615850e-47 |
| Msa0699530 | Msa0851740 | -0.822191 | 2.702735e-53 | -8.615850e-47 |
| Msa0699530 | Msa0854570 | -0.805487 | 1.303401e-49 | -8.615850e-47 |
| Msa0699530 | Msa0863760 | -0.806836 | 6.779855e-50 | -8.615850e-47 |
| Msa0699530 | Msa0863770 | -0.809824 | 1.562908e-50 | -8.615850e-47 |
| Msa0699530 | Msa0865990 | 0.830929 | 2.226089e-55 | -8.615850e-47 |
| Msa0699530 | Msa0887070 | -0.805053 | 1.606950e-49 | -8.615850e-47 |
| Msa0699530 | Msa0890250 | -0.831061 | 2.066535e-55 | -8.615850e-47 |
| Msa0699530 | Msa0909710 | -0.803826 | 2.895631e-49 | -8.615850e-47 |
| Msa0699530 | Msa0925160 | -0.848297 | 6.703198e-60 | -8.615850e-47 |
| Msa0699530 | Msa0955260 | -0.843280 | 1.544106e-58 | -8.615850e-47 |
| Msa0699530 | Msa0958020 | -0.800160 | 1.641518e-48 | -8.615850e-47 |
| Msa0699530 | Msa0961420 | 0.837255 | 5.788352e-57 | -8.615850e-47 |
| Msa0699530 | Msa0964680 | -0.812768 | 3.589755e-51 | -8.615850e-47 |
| Msa0699530 | Msa0970050 | -0.818579 | 1.821043e-52 | -8.615850e-47 |
| Msa0699530 | Msa0981740 | -0.811652 | 6.289792e-51 | -8.615850e-47 |
| Msa0699530 | Msa0981770 | -0.809636 | 1.716028e-50 | -8.615850e-47 |
| Msa0699530 | Msa1001780 | -0.806042 | 9.967238e-50 | -8.615850e-47 |
| Msa0699530 | Msa1011350 | 0.816867 | 4.431013e-52 | -8.615850e-47 |
| Msa0699530 | Msa1014350 | -0.812225 | 4.717948e-51 | -8.615850e-47 |
| Msa0699530 | Msa1037060 | 0.849946 | 2.332898e-60 | -8.615850e-47 |
| Msa0699530 | Msa1038320 | -0.863089 | 3.192275e-64 | -8.615850e-47 |
| Msa0699530 | Msa1055360 | -0.802623 | 5.139071e-49 | -8.615850e-47 |
| Msa0699530 | Msa1063920 | -0.831654 | 1.476955e-55 | -8.615850e-47 |
| Msa0699530 | Msa1072350 | -0.807242 | 5.561899e-50 | -8.615850e-47 |
| Msa0699530 | Msa1072460 | 0.817971 | 2.500517e-52 | -8.615850e-47 |
| Msa0699530 | Msa1079340 | 0.807780 | 4.275455e-50 | -8.615850e-47 |
| Msa0699530 | Msa1080460 | -0.820193 | 7.807459e-53 | -8.615850e-47 |
| Msa0699530 | Msa1081700 | -0.807086 | 6.001054e-50 | -8.615850e-47 |
| Msa0699530 | Msa1082820 | 0.849400 | 3.312487e-60 | -8.615850e-47 |
| Msa0699530 | Msa1089530 | -0.811248 | 7.696473e-51 | -8.615850e-47 |
| Msa0699530 | Msa1093390 | -0.820585 | 6.344751e-53 | -8.615850e-47 |
| Msa0699530 | Msa1097210 | -0.802586 | 5.230638e-49 | -8.615850e-47 |
| Msa0699530 | Msa1108140 | -0.806804 | 6.884836e-50 | -8.615850e-47 |
| Msa0699530 | Msa1118140 | -0.819917 | 9.026803e-53 | -8.615850e-47 |
| Msa0699530 | Msa1126910 | -0.801303 | 9.596767e-49 | -8.615850e-47 |
| Msa0699530 | Msa1130650 | -0.817634 | 2.978065e-52 | -8.615850e-47 |
| Msa0699530 | Msa1140010 | -0.832781 | 7.772604e-56 | -8.615850e-47 |
| Msa0699530 | Msa1142850 | 0.817937 | 2.544851e-52 | -8.615850e-47 |
| Msa0699530 | Msa1142860 | 0.801353 | 9.374152e-49 | -8.615850e-47 |
| Msa0699530 | Msa1159100 | -0.813130 | 2.990591e-51 | -8.615850e-47 |
| Msa0699530 | Msa1164800 | 0.849416 | 3.280520e-60 | -8.615850e-47 |
| Msa0699530 | Msa1166180 | -0.823451 | 1.375746e-53 | -8.615850e-47 |
| Msa0699530 | Msa1166280 | -0.824632 | 7.266024e-54 | -8.615850e-47 |
| Msa0699530 | Msa1168680 | 0.827922 | 1.197257e-54 | -8.615850e-47 |
| Msa0699530 | Msa1184580 | -0.804282 | 2.328170e-49 | -8.615850e-47 |
| Msa0699530 | Msa1204980 | 0.811525 | 6.703490e-51 | -8.615850e-47 |
| Msa0699530 | Msa1205010 | 0.810789 | 9.677901e-51 | -8.615850e-47 |
| Msa0699530 | Msa1207480 | 0.822700 | 2.059101e-53 | -8.615850e-47 |
| Msa0699530 | Msa1209790 | -0.800275 | 1.555858e-48 | -8.615850e-47 |
| Msa0699530 | Msa1219780 | 0.806852 | 6.725571e-50 | -8.615850e-47 |
| Msa0699530 | Msa1222030 | 0.862509 | 4.819675e-64 | -8.615850e-47 |
| Msa0699530 | Msa1223460 | -0.811419 | 7.067525e-51 | -8.615850e-47 |
| Msa0699530 | Msa1226600 | -0.807007 | 6.237261e-50 | -8.615850e-47 |
| Msa0699530 | Msa1233770 | -0.832053 | 1.177468e-55 | -8.615850e-47 |
| Msa0699530 | Msa1236640 | 0.811230 | 7.767589e-51 | -8.615850e-47 |
| Msa0699530 | Msa1254950 | -0.809343 | 1.982681e-50 | -8.615850e-47 |
| Msa0699530 | Msa1256540 | 0.816493 | 5.374445e-52 | -8.615850e-47 |
| Msa0699530 | Msa1260490 | 0.807964 | 3.907324e-50 | -8.615850e-47 |
| Msa0699530 | Msa1262310 | -0.834923 | 2.263342e-56 | -8.615850e-47 |
| Msa0699530 | Msa1264560 | -0.847436 | 1.158104e-59 | -8.615850e-47 |
| Msa0699530 | Msa1265960 | -0.827911 | 1.204103e-54 | -8.615850e-47 |
| Msa0699530 | Msa1276080 | -0.838300 | 3.121017e-57 | -8.615850e-47 |
| Msa0699530 | Msa1280120 | -0.834603 | 2.723912e-56 | -8.615850e-47 |
| Msa0699530 | Msa1295690 | -0.810400 | 1.174779e-50 | -8.615850e-47 |
| Msa0699530 | Msa1296960 | 0.810830 | 9.485509e-51 | -8.615850e-47 |
| Msa0699530 | Msa1317030 | -0.811534 | 6.673983e-51 | -8.615850e-47 |
| Msa0699530 | Msa1326000 | -0.820881 | 5.424686e-53 | -8.615850e-47 |
| Msa0699530 | Msa1332140 | 0.817617 | 3.005452e-52 | -8.615850e-47 |
| Msa0699530 | Msa1335970 | 0.853217 | 2.765813e-61 | -8.615850e-47 |
| Msa0699530 | Msa1370930 | 0.809738 | 1.631537e-50 | -8.615850e-47 |
| Msa0699530 | Msa1381130 | -0.807693 | 4.462522e-50 | -8.615850e-47 |
| Msa0699530 | Msa1385620 | -0.819461 | 1.147738e-52 | -8.615850e-47 |
| Msa0699530 | Msa1388790 | 0.820879 | 5.432473e-53 | -8.615850e-47 |
| Msa0699530 | Msa1395230 | 0.833734 | 4.498387e-56 | -8.615850e-47 |
| Msa0699530 | Msa1395690 | 0.814712 | 1.339518e-51 | -8.615850e-47 |
| Msa0699530 | Msa1400700 | 0.836703 | 8.012591e-57 | -8.615850e-47 |
| Msa0699530 | Msa1403930 | 0.847841 | 8.957240e-60 | -8.615850e-47 |
| Msa0699530 | Msa1405770 | -0.825235 | 5.235057e-54 | -8.615850e-47 |
| Msa0699530 | Msa1407210 | 0.806987 | 6.298413e-50 | -8.615850e-47 |
| Msa0699530 | Msa1407710 | -0.809038 | 2.304764e-50 | -8.615850e-47 |
| Msa0699530 | Msa1410170 | -0.816854 | 4.462605e-52 | -8.615850e-47 |
| Msa0699530 | Msa1412520 | -0.813183 | 2.911335e-51 | -8.615850e-47 |
| Msa0699530 | Msa1414330 | 0.800976 | 1.119562e-48 | -8.615850e-47 |
| Msa0699530 | Msa1418200 | -0.850377 | 1.766884e-60 | -8.615850e-47 |
| Msa0699530 | Msa1423550 | -0.830154 | 3.446080e-55 | -8.615850e-47 |
| Msa0699530 | Msa1428420 | -0.821343 | 4.246348e-53 | -8.615850e-47 |
| Msa0699530 | Msa1430760 | -0.804338 | 2.265982e-49 | -8.615850e-47 |
| Msa0699530 | Msa1431000 | -0.829147 | 6.055986e-55 | -8.615850e-47 |
| Msa0699530 | Msa1443290 | 0.806814 | 6.850389e-50 | -8.615850e-47 |
| Msa0699530 | Msa1447560 | -0.801686 | 8.009518e-49 | -8.615850e-47 |
| Msa0699530 | Msa1449600 | -0.826316 | 2.900741e-54 | -8.615850e-47 |
| Msa0699530 | Msa1456830 | -0.822127 | 2.797258e-53 | -8.615850e-47 |
| Msa0699530 | Msa1464560 | -0.805138 | 1.542890e-49 | -8.615850e-47 |
| Msa0130800 | Msa0699530 | -0.822526 | 2.259945e-53 | -8.615850e-47 |
| Msa0135980 | Msa0699530 | -0.810327 | 1.217870e-50 | -8.615850e-47 |
| Msa0137600 | Msa0699530 | -0.813964 | 1.960138e-51 | -8.615850e-47 |
| Msa0143970 | Msa0699530 | -0.809230 | 2.096822e-50 | -8.615850e-47 |
| Msa0159750 | Msa0699530 | -0.851553 | 8.232421e-61 | -8.615850e-47 |
| Msa0168100 | Msa0699530 | -0.828920 | 6.872889e-55 | -8.615850e-47 |
| Msa0175530 | Msa0699530 | -0.816492 | 5.377936e-52 | -8.615850e-47 |
| Msa0176620 | Msa0699530 | 0.810481 | 1.128441e-50 | -8.615850e-47 |
| Msa0178940 | Msa0699530 | -0.806929 | 6.478742e-50 | -8.615850e-47 |
| Msa0182930 | Msa0699530 | -0.806684 | 7.299421e-50 | -8.615850e-47 |
| Msa0183610 | Msa0699530 | -0.812474 | 4.162537e-51 | -8.615850e-47 |
| Msa0183620 | Msa0699530 | -0.820456 | 6.795563e-53 | -8.615850e-47 |
| Msa0185390 | Msa0699530 | -0.811405 | 7.117617e-51 | -8.615850e-47 |
| Msa0185640 | Msa0699530 | 0.821817 | 3.299894e-53 | -8.615850e-47 |
| Msa0188680 | Msa0699530 | 0.807337 | 5.309876e-50 | -8.615850e-47 |
| Msa0197940 | Msa0699530 | 0.822158 | 2.751169e-53 | -8.615850e-47 |
| Msa0200950 | Msa0699530 | 0.803385 | 3.575397e-49 | -8.615850e-47 |
| Msa0206940 | Msa0699530 | -0.800618 | 1.324530e-48 | -8.615850e-47 |
| Msa0207000 | Msa0699530 | -0.841602 | 4.302032e-58 | -8.615850e-47 |
| Msa0217470 | Msa0699530 | -0.803127 | 4.043551e-49 | -8.615850e-47 |
| Msa0222070 | Msa0699530 | -0.809550 | 1.790557e-50 | -8.615850e-47 |
| Msa0222120 | Msa0699530 | -0.812330 | 4.476983e-51 | -8.615850e-47 |
| Msa0223100 | Msa0699530 | -0.825669 | 4.133001e-54 | -8.615850e-47 |
| Msa0223290 | Msa0699530 | -0.811658 | 6.270167e-51 | -8.615850e-47 |
| Msa0223380 | Msa0699530 | -0.802895 | 4.515263e-49 | -8.615850e-47 |
| Msa0223390 | Msa0699530 | -0.800164 | 1.638809e-48 | -8.615850e-47 |
| Msa0231860 | Msa0699530 | 0.811953 | 5.409163e-51 | -8.615850e-47 |
| Msa0375060 | Msa0699530 | 0.976398 | 9.494011e-142 | -8.615850e-47 |
| Msa0380310 | Msa0699530 | -0.826380 | 2.800348e-54 | -8.615850e-47 |
| Msa0387790 | Msa0699530 | -0.804662 | 1.939806e-49 | -8.615850e-47 |
| Msa0401340 | Msa0699530 | -0.823378 | 1.430872e-53 | -8.615850e-47 |
| Msa0405660 | Msa0699530 | 0.825230 | 5.249383e-54 | -8.615850e-47 |
| Msa0414070 | Msa0699530 | -0.812906 | 3.348811e-51 | -8.615850e-47 |
| Msa0416890 | Msa0699530 | 0.810032 | 1.409863e-50 | -8.615850e-47 |
| Msa0423360 | Msa0699530 | 0.834791 | 2.443699e-56 | -8.615850e-47 |
| Msa0423600 | Msa0699530 | -0.815010 | 1.150954e-51 | -8.615850e-47 |
| Msa0427590 | Msa0699530 | -0.833851 | 4.204436e-56 | -8.615850e-47 |
| Msa0431520 | Msa0699530 | -0.807138 | 5.850899e-50 | -8.615850e-47 |
| Msa0431830 | Msa0699530 | -0.805940 | 1.047195e-49 | -8.615850e-47 |
| Msa0437710 | Msa0699530 | -0.840610 | 7.838462e-58 | -8.615850e-47 |
| Msa0448120 | Msa0699530 | -0.808440 | 3.093379e-50 | -8.615850e-47 |
| Msa0459120 | Msa0699530 | -0.818067 | 2.378068e-52 | -8.615850e-47 |
| Msa0462590 | Msa0699530 | -0.801528 | 8.627634e-49 | -8.615850e-47 |
| Msa0467800 | Msa0699530 | -0.812971 | 3.241124e-51 | -8.615850e-47 |
| Msa0467880 | Msa0699530 | -0.811025 | 8.604694e-51 | -8.615850e-47 |
| Msa0482680 | Msa0699530 | -0.821011 | 5.065857e-53 | -8.615850e-47 |
| Msa0240780 | Msa0699530 | -0.807591 | 4.690807e-50 | -8.615850e-47 |
| Msa0246700 | Msa0699530 | 0.801030 | 1.091390e-48 | -8.615850e-47 |
| Msa0252180 | Msa0699530 | -0.810798 | 9.636820e-51 | -8.615850e-47 |
| Msa0258670 | Msa0699530 | 0.830923 | 2.234022e-55 | -8.615850e-47 |
| Msa0263620 | Msa0699530 | -0.810546 | 1.092371e-50 | -8.615850e-47 |
| Msa0275030 | Msa0699530 | -0.811052 | 8.491205e-51 | -8.615850e-47 |
| Msa0282170 | Msa0699530 | -0.802222 | 6.214089e-49 | -8.615850e-47 |
| Msa0288240 | Msa0699530 | -0.836128 | 1.121765e-56 | -8.615850e-47 |
| Msa0288330 | Msa0699530 | -0.851152 | 1.068731e-60 | -8.615850e-47 |
| Msa0296610 | Msa0699530 | -0.804478 | 2.119071e-49 | -8.615850e-47 |
| Msa0318270 | Msa0699530 | -0.801120 | 1.045780e-48 | -8.615850e-47 |
| Msa0318310 | Msa0699530 | -0.801731 | 7.839761e-49 | -8.615850e-47 |
| Msa0323990 | Msa0699530 | -0.818720 | 1.691662e-52 | -8.615850e-47 |
| Msa0326670 | Msa0699530 | -0.851666 | 7.648360e-61 | -8.615850e-47 |
| Msa0333900 | Msa0699530 | -0.807249 | 5.542278e-50 | -8.615850e-47 |
| Msa0334020 | Msa0699530 | -0.805321 | 1.412431e-49 | -8.615850e-47 |
| Msa0336270 | Msa0699530 | -0.821151 | 4.702820e-53 | -8.615850e-47 |
| Msa0339860 | Msa0699530 | -0.822011 | 2.975514e-53 | -8.615850e-47 |
| Msa0340550 | Msa0699530 | -0.809858 | 1.537345e-50 | -8.615850e-47 |
| Msa0342200 | Msa0699530 | -0.850825 | 1.321831e-60 | -8.615850e-47 |
| Msa0342340 | Msa0699530 | 0.804870 | 1.755360e-49 | -8.615850e-47 |
| Msa0350020 | Msa0699530 | -0.806005 | 1.014548e-49 | -8.615850e-47 |
| Msa0352510 | Msa0699530 | -0.820175 | 7.880410e-53 | -8.615850e-47 |
| Msa0354390 | Msa0699530 | -0.815725 | 7.980406e-52 | -8.615850e-47 |
| Msa0498570 | Msa0699530 | 0.813765 | 2.168402e-51 | -8.615850e-47 |
| Msa0505660 | Msa0699530 | -0.817059 | 4.013853e-52 | -8.615850e-47 |
| Msa0509970 | Msa0699530 | -0.844557 | 7.024812e-59 | -8.615850e-47 |
| Msa0512310 | Msa0699530 | -0.800733 | 1.254740e-48 | -8.615850e-47 |
| Msa0514990 | Msa0699530 | -0.807231 | 5.591193e-50 | -8.615850e-47 |
| Msa0518160 | Msa0699530 | -0.851699 | 7.485389e-61 | -8.615850e-47 |
| Msa0524050 | Msa0699530 | -0.820584 | 6.349461e-53 | -8.615850e-47 |
| Msa0524120 | Msa0699530 | -0.823748 | 1.172140e-53 | -8.615850e-47 |
| Msa0526640 | Msa0699530 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0531990 | Msa0699530 | 0.815030 | 1.139144e-51 | -8.615850e-47 |
| Msa0532100 | Msa0699530 | 0.819702 | 1.010732e-52 | -8.615850e-47 |
| Msa0546380 | Msa0699530 | -0.831619 | 1.506122e-55 | -8.615850e-47 |
| Msa0546740 | Msa0699530 | -0.830993 | 2.146764e-55 | -8.615850e-47 |
| Msa0553220 | Msa0699530 | 0.815160 | 1.066049e-51 | -8.615850e-47 |
| Msa0562300 | Msa0699530 | 0.847683 | 9.905402e-60 | -8.615850e-47 |
| Msa0576420 | Msa0699530 | -0.809173 | 2.156235e-50 | -8.615850e-47 |
| Msa0583930 | Msa0699530 | -0.802686 | 4.987117e-49 | -8.615850e-47 |
| Msa0583940 | Msa0699530 | -0.813587 | 2.373837e-51 | -8.615850e-47 |
| Msa0598250 | Msa0699530 | -0.814181 | 1.756060e-51 | -8.615850e-47 |
| Msa0600820 | Msa0699530 | -0.801618 | 8.270915e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699530 | MtrunA17_Chr8g0375501 | 96.934 | 587 | 1 | 4 | 4 | 573 | 5 | 591 | 0.0 | 1157 |
| Msa0699530 | MtrunA17_Chr6g0480551 | 84.509 | 581 | 72 | 5 | 10 | 573 | 9 | 588 | 0.0 | 986 |
| Msa0699530 | MtrunA17_Chr5g0434001 | 74.315 | 584 | 132 | 5 | 8 | 573 | 24 | 607 | 0.0 | 896 |
| Msa0699530 | MtrunA17_Chr4g0026371 | 47.578 | 578 | 275 | 8 | 17 | 573 | 19 | 589 | 0.0 | 533 |
| Msa0699530 | MtrunA17_Chr8g0380651 | 39.616 | 573 | 320 | 8 | 22 | 573 | 22 | 589 | 2.84e-135 | 406 |
| Msa0699530 | MtrunA17_Chr2g0277491 | 39.930 | 571 | 319 | 8 | 22 | 573 | 18 | 583 | 7.64e-134 | 402 |
| Msa0699530 | MtrunA17_Chr8g0342031 | 34.154 | 609 | 332 | 10 | 29 | 573 | 45 | 648 | 2.32e-116 | 359 |
| Msa0699530 | MtrunA17_Chr1g0150181 | 32.577 | 617 | 341 | 12 | 24 | 573 | 29 | 637 | 6.44e-105 | 329 |
| Msa0699530 | MtrunA17_Chr3g0136881 | 32.512 | 609 | 336 | 11 | 32 | 573 | 36 | 636 | 1.16e-103 | 326 |
| Msa0699530 | MtrunA17_Chr4g0065301 | 27.044 | 636 | 364 | 19 | 27 | 573 | 32 | 656 | 2.23e-74 | 249 |
| Msa0699530 | MtrunA17_Chr5g0448371 | 26.562 | 640 | 361 | 19 | 27 | 573 | 42 | 665 | 1.97e-64 | 223 |
| Msa0699530 | MtrunA17_Chr3g0120461 | 25.822 | 639 | 367 | 20 | 27 | 573 | 36 | 659 | 1.96e-62 | 217 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699530 | AT2G01970.1 | 86.348 | 586 | 62 | 5 | 5 | 573 | 8 | 592 | 0.0 | 1005 |
| Msa0699530 | AT1G14670.1 | 86.261 | 575 | 62 | 4 | 16 | 573 | 18 | 592 | 0.0 | 974 |
| Msa0699530 | AT5G37310.1 | 80.416 | 577 | 96 | 4 | 14 | 573 | 17 | 593 | 0.0 | 928 |
| Msa0699530 | AT5G37310.2 | 80.416 | 577 | 96 | 4 | 14 | 573 | 17 | 593 | 0.0 | 928 |
| Msa0699530 | AT1G08350.3 | 49.147 | 586 | 273 | 9 | 8 | 573 | 9 | 589 | 0.0 | 576 |
| Msa0699530 | AT1G08350.2 | 49.147 | 586 | 273 | 9 | 8 | 573 | 9 | 589 | 0.0 | 576 |
| Msa0699530 | AT1G08350.1 | 47.852 | 512 | 243 | 8 | 82 | 573 | 1 | 508 | 3.38e-169 | 490 |
| Msa0699530 | AT1G08350.4 | 47.860 | 514 | 244 | 8 | 8 | 501 | 9 | 518 | 4.42e-167 | 486 |
| Msa0699530 | AT1G10950.1 | 38.908 | 568 | 323 | 8 | 25 | 573 | 27 | 589 | 9.19e-131 | 395 |
| Msa0699530 | AT3G13772.1 | 32.091 | 617 | 334 | 12 | 29 | 573 | 38 | 641 | 5.60e-109 | 340 |
| Msa0699530 | AT1G55130.1 | 32.838 | 606 | 344 | 10 | 29 | 573 | 34 | 637 | 3.99e-108 | 338 |
| Msa0699530 | AT2G24170.1 | 33.553 | 608 | 331 | 12 | 32 | 573 | 37 | 637 | 3.16e-106 | 333 |
| Msa0699530 | AT5G10840.1 | 31.612 | 639 | 363 | 12 | 2 | 573 | 17 | 648 | 1.27e-103 | 326 |
| Msa0699530 | AT5G25100.1 | 31.554 | 637 | 353 | 13 | 12 | 573 | 16 | 644 | 1.33e-103 | 326 |
| Msa0699530 | AT5G25100.2 | 32.190 | 612 | 337 | 12 | 32 | 573 | 48 | 651 | 3.62e-103 | 325 |
| Msa0699530 | AT4G12650.1 | 25.434 | 633 | 377 | 17 | 27 | 573 | 29 | 652 | 4.87e-58 | 205 |
| Msa0699530 | AT5G35160.1 | 31.017 | 403 | 252 | 9 | 189 | 573 | 236 | 630 | 1.20e-57 | 204 |
| Msa0699530 | AT5G35160.2 | 31.017 | 403 | 252 | 9 | 189 | 573 | 264 | 658 | 2.07e-57 | 204 |
| Msa0699530 | AT5G35160.3 | 31.017 | 403 | 252 | 9 | 189 | 573 | 264 | 658 | 2.07e-57 | 204 |
| Msa0699530 | AT5G35160.4 | 31.017 | 403 | 252 | 9 | 189 | 573 | 264 | 658 | 2.07e-57 | 204 |
| Msa0699530 | AT2G24170.2 | 30.120 | 415 | 226 | 10 | 32 | 389 | 37 | 444 | 4.30e-55 | 193 |
Find 156 sgRNAs with CRISPR-Local
Find 412 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAAGGAAGAGAAGAAAA+TGG | 0.197169 | 4_4:+70213800 | Msa0699530:exon |
| TTCAACTTGAAGGGACTAAT+TGG | 0.200318 | 4_4:+70216578 | Msa0699530:CDS |
| TTGACACTTAAGGTAGATTT+TGG | 0.203060 | 4_4:+70219669 | Msa0699530:three_prime_UTR |
| TTGCCAATCTGGGGATTTAT+TGG | 0.213909 | 4_4:+70215692 | Msa0699530:CDS |
| TACTGAACAAATTACTATTA+AGG | 0.241992 | 4_4:+70219825 | Msa0699530:three_prime_UTR |
| GTGAAAGGGACCGACTTTAT+TGG | 0.261642 | 4_4:-70213934 | None:intergenic |
| ACCAAGGGCAGCTGCAAATA+TGG | 0.266358 | 4_4:-70216291 | None:intergenic |
| GCAACTGCTGCCCTTCCTTT+TGG | 0.272026 | 4_4:+70216780 | Msa0699530:CDS |
| GACCTTCCATTCTGTGTAAC+AGG | 0.280564 | 4_4:+70214161 | Msa0699530:CDS |
| ATGCAAACTTCGTTCTTCTT+TGG | 0.295356 | 4_4:+70219359 | Msa0699530:CDS |
| AAGTTACCAGCGTCCATATT+AGG | 0.305475 | 4_4:-70216821 | None:intergenic |
| TTTCTTTGTGGTGGATCAAC+TGG | 0.306655 | 4_4:+70219275 | Msa0699530:CDS |
| TCAAAGCTTCTGTTGTTATC+AGG | 0.309650 | 4_4:-70219598 | None:intergenic |
| TTTGCGTGATAGTCCTAATA+TGG | 0.324378 | 4_4:+70216808 | Msa0699530:CDS |
| GAAATAACATGACACTAATA+TGG | 0.331051 | 4_4:-70219626 | None:intergenic |
| GCAAGTCATCGTAATACATT+TGG | 0.331551 | 4_4:-70215673 | None:intergenic |
| TTTGCAGCTGCCCTTGGTTC+CGG | 0.340488 | 4_4:+70216296 | Msa0699530:CDS |
| GCTCTCACATCTGGAATTGC+TGG | 0.344836 | 4_4:+70216532 | Msa0699530:CDS |
| CCACAACTACTCACACTTGA+TGG | 0.349739 | 4_4:-70219474 | None:intergenic |
| ATTACGATGACTTGCCAATC+TGG | 0.360772 | 4_4:+70215681 | Msa0699530:CDS |
| GTCATATATGCTCTCACATC+TGG | 0.374176 | 4_4:+70216523 | Msa0699530:CDS |
| AAATGGGAAGAAGTGTCTTA+TGG | 0.378574 | 4_4:+70213817 | Msa0699530:exon |
| GAAACCCTGCCATTGCCATC+TGG | 0.384130 | 4_4:-70216968 | None:intergenic |
| TCCTTCTATATTCAACTTGA+AGG | 0.387134 | 4_4:+70216568 | Msa0699530:CDS |
| AAATAAAGCTCCTCGGTTGT+AGG | 0.389595 | 4_4:-70216488 | None:intergenic |
| CACATCACTTGGAGATTCAC+TGG | 0.393428 | 4_4:+70215966 | Msa0699530:CDS |
| CCCTTCAAGTTGAATATAGA+AGG | 0.401751 | 4_4:-70216569 | None:intergenic |
| GCAAATATGGACTTGAACTT+AGG | 0.402386 | 4_4:-70216278 | None:intergenic |
| TCCATATTTGCAGCTGCCCT+TGG | 0.404556 | 4_4:+70216290 | Msa0699530:CDS |
| TTCGTTCTTCTTTGGCTACA+TGG | 0.414161 | 4_4:+70219367 | Msa0699530:CDS |
| GTAGTTGTGGTTGAATGTTT+TGG | 0.415869 | 4_4:+70219487 | Msa0699530:exon |
| AAGAAGGAAGAGAAGAAAAT+GGG | 0.416275 | 4_4:+70213801 | Msa0699530:exon |
| TTGCACAAGCTTGACACTTA+AGG | 0.429160 | 4_4:+70219659 | Msa0699530:three_prime_UTR |
| ACTTCGCCATTACTTGTGTT+AGG | 0.433145 | 4_4:+70216840 | Msa0699530:CDS |
| GAGAAATTCCACCTCTTCCT+TGG | 0.435711 | 4_4:+70216928 | Msa0699530:CDS |
| GAAAATATTTATACTCGCTC+GGG | 0.436229 | 4_4:-70215742 | None:intergenic |
| TTCTTCTCTTCCACATCACT+TGG | 0.436449 | 4_4:+70215955 | Msa0699530:CDS |
| ATTGGAACTGTTGACAAAGA+AGG | 0.436776 | 4_4:+70215710 | Msa0699530:CDS |
| AGAAAATATTTATACTCGCT+CGG | 0.436979 | 4_4:-70215743 | None:intergenic |
| AAGGAAGAGGTGGAATTTCT+CGG | 0.444124 | 4_4:-70216926 | None:intergenic |
| AATTTACCTGTTACACAGAA+TGG | 0.444335 | 4_4:-70214167 | None:intergenic |
| AAGCGATTGCAACTGTGTTA+AGG | 0.450571 | 4_4:-70216752 | None:intergenic |
| CGCAAATTGTGCCAAAAGGA+AGG | 0.452498 | 4_4:-70216791 | None:intergenic |
| TTGCTAGTGTCTGGGGCCAC+AGG | 0.452557 | 4_4:+70217030 | Msa0699530:intron |
| AAACCCTGCCATTGCCATCT+GGG | 0.456769 | 4_4:-70216967 | None:intergenic |
| AGGAAGAGGTGGAATTTCTC+GGG | 0.456787 | 4_4:-70216925 | None:intergenic |
| CACGCATGAGAATGGTTGCC+AGG | 0.459320 | 4_4:-70216036 | None:intergenic |
| TGGACTTGAACTTAGGAAAC+CGG | 0.463443 | 4_4:-70216271 | None:intergenic |
| TTCCACCTCTTCCTTGGTAC+AGG | 0.464858 | 4_4:+70216934 | Msa0699530:CDS |
| CTTCAAGACACGCATGAGAA+TGG | 0.465748 | 4_4:-70216044 | None:intergenic |
| TCAACTTGAAGGGACTAATT+GGG | 0.473972 | 4_4:+70216579 | Msa0699530:CDS |
| GTAGTACAGCTCTATGTAGA+TGG | 0.476433 | 4_4:-70217003 | None:intergenic |
| TGCCATTGCCATCTGGGGAA+TGG | 0.478930 | 4_4:-70216961 | None:intergenic |
| CCACTTCCCTGTCCTCAGTC+AGG | 0.480439 | 4_4:-70215853 | None:intergenic |
| ATTCCCCAGATGGCAATGGC+AGG | 0.485795 | 4_4:+70216963 | Msa0699530:CDS |
| TATGGCTTCTTTCTCATGCT+CGG | 0.487027 | 4_4:+70219401 | Msa0699530:CDS |
| TGTTAAGGAAGCAGAACATA+AGG | 0.488623 | 4_4:-70216737 | None:intergenic |
| CTATGTAGATGGCACTGAAT+GGG | 0.490420 | 4_4:-70216992 | None:intergenic |
| TACATGGCCTGCATCTGCTA+TGG | 0.491443 | 4_4:+70219383 | Msa0699530:CDS |
| ATCTGACAGAGAAGGAAAGA+AGG | 0.492163 | 4_4:+70213785 | Msa0699530:five_prime_UTR |
| TTACGATGACTTGCCAATCT+GGG | 0.494168 | 4_4:+70215682 | Msa0699530:CDS |
| AATAAAGCTCCTCGGTTGTA+GGG | 0.495013 | 4_4:-70216487 | None:intergenic |
| GTCAGGTCAACCACAGAATG+AGG | 0.499157 | 4_4:-70215836 | None:intergenic |
| CCGACTTTATTGGCGTAAAG+AGG | 0.503145 | 4_4:-70213924 | None:intergenic |
| TACGCAAGATCAGATATGTC+TGG | 0.503961 | 4_4:+70219332 | Msa0699530:CDS |
| TCTTTGTCCGCCACATATAC+CGG | 0.505280 | 4_4:+70219450 | Msa0699530:CDS |
| TAGTAGTGCGGACAGGTGCT+TGG | 0.505666 | 4_4:-70216896 | None:intergenic |
| AAGCAGAACATAAGGAAAAG+AGG | 0.507100 | 4_4:-70216729 | None:intergenic |
| TCTATGTAGATGGCACTGAA+TGG | 0.507383 | 4_4:-70216993 | None:intergenic |
| ATATGTGGCGGACAAAGAGC+AGG | 0.510664 | 4_4:-70219445 | None:intergenic |
| CAGCGAGAAGAGAGATCAGC+AGG | 0.514359 | 4_4:-70213845 | None:intergenic |
| ATCGGACCTGGGATTGTGAA+AGG | 0.516683 | 4_4:-70213949 | None:intergenic |
| TTTCTCATGCTCGGTAGCGT+AGG | 0.518262 | 4_4:+70219410 | Msa0699530:CDS |
| ATCACGCAAATTGTGCCAAA+AGG | 0.520209 | 4_4:-70216795 | None:intergenic |
| CCACAGAATGAGGGTCCATA+CGG | 0.520478 | 4_4:-70215826 | None:intergenic |
| CCTTCTATATTCAACTTGAA+GGG | 0.527417 | 4_4:+70216569 | Msa0699530:CDS |
| GTTAGAAACTTATTGCTGAC+AGG | 0.528315 | 4_4:+70216690 | Msa0699530:CDS |
| TGGTTGACCTGACTGAGGAC+AGG | 0.531034 | 4_4:+70215846 | Msa0699530:CDS |
| TTCTGTTAGTTAATGAGAGA+AGG | 0.531290 | 4_4:+70219524 | Msa0699530:three_prime_UTR |
| CCTGACTGAGGACAGGGAAG+TGG | 0.535058 | 4_4:+70215853 | Msa0699530:CDS |
| GTTCCAATAAATCCCCAGAT+TGG | 0.536248 | 4_4:-70215695 | None:intergenic |
| GTAACGATGATCGGAGGCAT+CGG | 0.536695 | 4_4:-70213883 | None:intergenic |
| TCGGTCCCTTTCACAATCCC+AGG | 0.536979 | 4_4:+70213943 | Msa0699530:CDS |
| TCAACTGGCTTATTCATCTA+CGG | 0.537761 | 4_4:+70219290 | Msa0699530:CDS |
| AGCAGAACATAAGGAAAAGA+GGG | 0.539091 | 4_4:-70216728 | None:intergenic |
| GGAAAAGAGGGCCACAAAAG+AGG | 0.539962 | 4_4:-70216716 | None:intergenic |
| TAACTGAGTGCCGGAACCAA+GGG | 0.542563 | 4_4:-70216306 | None:intergenic |
| ACTTGATGGACCGGTATATG+TGG | 0.546448 | 4_4:-70219460 | None:intergenic |
| ACTACTCACACTTGATGGAC+CGG | 0.548206 | 4_4:-70219469 | None:intergenic |
| GGACAAAGAGCAGGGAGGCA+CGG | 0.550307 | 4_4:-70219436 | None:intergenic |
| GCTGATGATCAAGAGGAGAC+AGG | 0.551210 | 4_4:+70216221 | Msa0699530:CDS |
| GCGCTTGGTGAGGTGTTGAA+TGG | 0.553794 | 4_4:+70215518 | Msa0699530:CDS |
| CCTCTTTACGCCAATAAAGT+CGG | 0.554240 | 4_4:+70213924 | Msa0699530:CDS |
| AAAGAAGCCATAGCAGATGC+AGG | 0.557569 | 4_4:-70219390 | None:intergenic |
| ATGATCAAGAGGAGACAGGA+TGG | 0.557782 | 4_4:+70216225 | Msa0699530:CDS |
| CTCGGGGATATTTAGTAGTG+CGG | 0.558407 | 4_4:-70216908 | None:intergenic |
| AATAAAACATTTAAACCCCA+TGG | 0.558783 | 4_4:-70219694 | None:intergenic |
| AAAGAAAAGACTGAAGCGCT+TGG | 0.559289 | 4_4:+70215503 | Msa0699530:CDS |
| CGTCACACAGGAGTTTATGA+TGG | 0.560364 | 4_4:-70215993 | None:intergenic |
| AGCTTTATTTACTGCACTCG+TGG | 0.560606 | 4_4:+70216501 | Msa0699530:CDS |
| GGATATTTAGTAGTGCGGAC+AGG | 0.564998 | 4_4:-70216903 | None:intergenic |
| GTGCTCCTGTACCAAGGAAG+AGG | 0.566138 | 4_4:-70216939 | None:intergenic |
| CAGGAGCACCATTCCCCAGA+TGG | 0.572619 | 4_4:+70216953 | Msa0699530:CDS |
| ATTCCACCTAACACAAGTAA+TGG | 0.572703 | 4_4:-70216846 | None:intergenic |
| CAGAAGATCATGAATGGTGG+TGG | 0.572866 | 4_4:+70217150 | Msa0699530:CDS |
| AACTGTTGACAAAGAAGGAA+AGG | 0.575555 | 4_4:+70215715 | Msa0699530:CDS |
| TCGGACCTGGGATTGTGAAA+GGG | 0.576908 | 4_4:-70213948 | None:intergenic |
| AAGATCATGAATGGTGGTGG+AGG | 0.577459 | 4_4:+70217153 | Msa0699530:CDS |
| GCAAATTGTGCCAAAAGGAA+GGG | 0.577825 | 4_4:-70216790 | None:intergenic |
| TACGATGACTTGCCAATCTG+GGG | 0.582508 | 4_4:+70215683 | Msa0699530:CDS |
| TCTATCTAATCTGACAGAGA+AGG | 0.588138 | 4_4:+70213777 | Msa0699530:five_prime_UTR |
| CCATCAAGTGTGAGTAGTTG+TGG | 0.589399 | 4_4:+70219474 | Msa0699530:exon |
| TCCGATCATCGTTACAGCGA+CGG | 0.590246 | 4_4:+70213891 | Msa0699530:CDS |
| TTCCCCAGATGGCAATGGCA+GGG | 0.592880 | 4_4:+70216964 | Msa0699530:CDS |
| TCTGCAAGAAGACGCTCACA+AGG | 0.594686 | 4_4:+70215603 | Msa0699530:CDS |
| AACCCTGCCATTGCCATCTG+GGG | 0.595625 | 4_4:-70216966 | None:intergenic |
| TACCTGTTACACAGAATGGA+AGG | 0.596727 | 4_4:-70214163 | None:intergenic |
| CTCCTGTACCAAGGAAGAGG+TGG | 0.597138 | 4_4:-70216936 | None:intergenic |
| CACCATTCCCCAGATGGCAA+TGG | 0.597636 | 4_4:+70216959 | Msa0699530:CDS |
| CAGAGTGAATAACTGAGTGC+CGG | 0.598774 | 4_4:-70216315 | None:intergenic |
| CAGTGAATCTCCAAGTGATG+TGG | 0.599430 | 4_4:-70215965 | None:intergenic |
| GTTCATAAGGAGCACTAACA+AGG | 0.599847 | 4_4:-70215547 | None:intergenic |
| ATAACTGAGTGCCGGAACCA+AGG | 0.601440 | 4_4:-70216307 | None:intergenic |
| CACAGAATGAGGGTCCATAC+GGG | 0.605974 | 4_4:-70215825 | None:intergenic |
| GGAAGCTGCTGATGATCAAG+AGG | 0.608953 | 4_4:+70216214 | Msa0699530:CDS |
| ACAGGATGGAAGTACATTCA+CGG | 0.609901 | 4_4:+70216239 | Msa0699530:CDS |
| GCCGTCGCTGTAACGATGAT+CGG | 0.610207 | 4_4:-70213892 | None:intergenic |
| GATTGAAATCAGTGCCCGTA+TGG | 0.621489 | 4_4:+70215811 | Msa0699530:CDS |
| TTGCTGCAGAAGATCATGAA+TGG | 0.621681 | 4_4:+70217144 | Msa0699530:CDS |
| GTGCAGTAAATAAAGCTCCT+CGG | 0.626601 | 4_4:-70216495 | None:intergenic |
| CATCATAAACTCCTGTGTGA+CGG | 0.630326 | 4_4:+70215994 | Msa0699530:CDS |
| TTACACAGAATGGAAGGTCA+AGG | 0.631427 | 4_4:-70214157 | None:intergenic |
| GATAGTCCTAATATGGACGC+TGG | 0.635172 | 4_4:+70216815 | Msa0699530:CDS |
| TTTATTGGCGTAAAGAGGAA+CGG | 0.635235 | 4_4:-70213919 | None:intergenic |
| CGAGAAGAGAGATCAGCAGG+TGG | 0.635836 | 4_4:-70213842 | None:intergenic |
| GTATTCTATCCCTACAACCG+AGG | 0.642112 | 4_4:+70216478 | Msa0699530:CDS |
| CAAAAGAAGAACCGTCACAC+AGG | 0.644678 | 4_4:-70216005 | None:intergenic |
| TCAGGTCAACCACAGAATGA+GGG | 0.644900 | 4_4:-70215835 | None:intergenic |
| GGTTGACCTGACTGAGGACA+GGG | 0.648121 | 4_4:+70215847 | Msa0699530:CDS |
| CCGTATGGACCCTCATTCTG+TGG | 0.650303 | 4_4:+70215826 | Msa0699530:CDS |
| AAAGACTGAAGCGCTTGGTG+AGG | 0.652344 | 4_4:+70215508 | Msa0699530:CDS |
| AAGTTGAATATAGAAGGAAG+TGG | 0.654133 | 4_4:-70216563 | None:intergenic |
| CACCAGATATGCTCAAGACG+AGG | 0.655302 | 4_4:+70216193 | Msa0699530:intron |
| TGATGGACCGGTATATGTGG+CGG | 0.659080 | 4_4:-70219457 | None:intergenic |
| GTCGCTGTAACGATGATCGG+AGG | 0.669845 | 4_4:-70213889 | None:intergenic |
| GGCATCGGATCTGACGTGAG+TGG | 0.677563 | 4_4:-70213868 | None:intergenic |
| GGAATGGTGCTCCTGTACCA+AGG | 0.679836 | 4_4:-70216945 | None:intergenic |
| TATGTGGCGGACAAAGAGCA+GGG | 0.684805 | 4_4:-70219444 | None:intergenic |
| GGAAGAGGTGGAATTTCTCG+GGG | 0.685340 | 4_4:-70216924 | None:intergenic |
| CGTCACTGCTTTCATCACTG+TGG | 0.690084 | 4_4:+70217103 | Msa0699530:CDS |
| TTCTGTGGTTGACCTGACTG+AGG | 0.695894 | 4_4:+70215841 | Msa0699530:CDS |
| CTGCAAGAAGACGCTCACAA+GGG | 0.699485 | 4_4:+70215604 | Msa0699530:CDS |
| CTGCAGAAGATCATGAATGG+TGG | 0.720682 | 4_4:+70217147 | Msa0699530:CDS |
| GCAAGTTAATCAGTTCCGAG+AGG | 0.727165 | 4_4:+70215628 | Msa0699530:CDS |
| TGTAGATAGTGTAAATCCTG+TGG | 0.748430 | 4_4:-70217046 | None:intergenic |
| GTGGCGGACAAAGAGCAGGG+AGG | 0.771980 | 4_4:-70219441 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATAATAGTAATAATT+TGG | - | chr4_4:70214251-70214270 | None:intergenic | 10.0% |
| !!! | GTTTTTTTTTTTTTTTTTGA+TGG | + | chr4_4:70214603-70214622 | Msa0699530:intron | 10.0% |
| !! | ATAATACTAGATCATTAATA+TGG | - | chr4_4:70214076-70214095 | None:intergenic | 15.0% |
| !! | TAGTTTATTTAAATCTTGTT+TGG | + | chr4_4:70214310-70214329 | Msa0699530:intron | 15.0% |
| !! | ATTAAACTAAATGAGAAAAA+TGG | - | chr4_4:70215018-70215037 | None:intergenic | 15.0% |
| !!! | TTTTTAAACTTAAGTTCATA+AGG | - | chr4_4:70215563-70215582 | None:intergenic | 15.0% |
| !! | TACAAACTCAAAAATAAATA+TGG | - | chr4_4:70217369-70217388 | None:intergenic | 15.0% |
| !!! | TATTTATTTTTGAGTTTGTA+TGG | + | chr4_4:70217369-70217388 | Msa0699530:intron | 15.0% |
| !! | ACAAAAGTAAAAAAAAAAAC+TGG | + | chr4_4:70218025-70218044 | Msa0699530:intron | 15.0% |
| !! | AACTGATGTATAAAATATAT+GGG | - | chr4_4:70218645-70218664 | None:intergenic | 15.0% |
| !!! | TAATTTTTAGCTTAGTATAA+GGG | + | chr4_4:70218788-70218807 | Msa0699530:intron | 15.0% |
| !! | AAAGTAGACTAAAAATTTAC+GGG | - | chr4_4:70214985-70215004 | None:intergenic | 20.0% |
| !! | CAAAGTAGACTAAAAATTTA+CGG | - | chr4_4:70214986-70215005 | None:intergenic | 20.0% |
| !! | TAGTTTAATTAACTCTTGTT+TGG | + | chr4_4:70215029-70215048 | Msa0699530:intron | 20.0% |
| !!! | ATTGTTATTTGTTTCAGTTT+TGG | + | chr4_4:70215067-70215086 | Msa0699530:intron | 20.0% |
| !! | ATATGTAAATTATAGTCCAA+TGG | + | chr4_4:70215107-70215126 | Msa0699530:intron | 20.0% |
| !!! | TTGTTGAAGCTTTTTTTTAA+AGG | + | chr4_4:70216370-70216389 | Msa0699530:intron | 20.0% |
| !! | TCAAAAATAAATATGGTGAA+AGG | - | chr4_4:70217362-70217381 | None:intergenic | 20.0% |
| !!! | TATTTCTATGATCTTATTCT+AGG | - | chr4_4:70217654-70217673 | None:intergenic | 20.0% |
| !! | TGTATCAATGTTTAAAAATC+TGG | - | chr4_4:70218141-70218160 | None:intergenic | 20.0% |
| !! | ATTCAGAATGAAAATTTGAA+AGG | - | chr4_4:70218288-70218307 | None:intergenic | 20.0% |
| !! | AATAATTAGAGAAAGTAAGA+TGG | + | chr4_4:70218426-70218445 | Msa0699530:intron | 20.0% |
| !! | ATTAAAACTGTTAACAGATT+TGG | + | chr4_4:70218505-70218524 | Msa0699530:intron | 20.0% |
| !! | CAACTGATGTATAAAATATA+TGG | - | chr4_4:70218646-70218665 | None:intergenic | 20.0% |
| !! | TACTAAGCTAAAAATTAGTT+AGG | - | chr4_4:70218785-70218804 | None:intergenic | 20.0% |
| !!! | CTAATTTTTAGCTTAGTATA+AGG | + | chr4_4:70218787-70218806 | Msa0699530:intron | 20.0% |
| !! | ATAAGCTCAAACTTAAATTT+GGG | - | chr4_4:70218978-70218997 | None:intergenic | 20.0% |
| !! | GAAGTAAGCAATAATAAAAT+TGG | - | chr4_4:70219107-70219126 | None:intergenic | 20.0% |
| !! | TACTGAACAAATTACTATTA+AGG | + | chr4_4:70219825-70219844 | Msa0699530:three_prime_UTR | 20.0% |
| ! | TGAGAAAATTGAAAAGAGAT+CGG | - | chr4_4:70213970-70213989 | None:intergenic | 25.0% |
| ! | TATTATCTAATCATCATGTG+TGG | + | chr4_4:70214263-70214282 | Msa0699530:intron | 25.0% |
| !! | ATGCAATGATTTGTATAGAT+TGG | - | chr4_4:70214869-70214888 | None:intergenic | 25.0% |
| !!! | AATTTTTAGTCTACTTTGTG+TGG | + | chr4_4:70214988-70215007 | Msa0699530:intron | 25.0% |
| ! | TAAAAAAGAGAAAGACTCTA+CGG | + | chr4_4:70215577-70215596 | Msa0699530:CDS | 25.0% |
| ! | AGAAAATATTTATACTCGCT+CGG | - | chr4_4:70215746-70215765 | None:intergenic | 25.0% |
| ! | AATGTTCTATATAGGTGAAT+AGG | - | chr4_4:70216121-70216140 | None:intergenic | 25.0% |
| ! | TATTCACCTATATAGAACAT+TGG | + | chr4_4:70216120-70216139 | Msa0699530:intron | 25.0% |
| ! | AATAGACCAATGTTCTATAT+AGG | - | chr4_4:70216129-70216148 | None:intergenic | 25.0% |
| ! | AAAAAAGCTTCAACAATGAA+GGG | - | chr4_4:70216366-70216385 | None:intergenic | 25.0% |
| ! | AAAAAAAGCTTCAACAATGA+AGG | - | chr4_4:70216367-70216386 | None:intergenic | 25.0% |
| ! | ATTACTGTTTGATTGTGAAA+TGG | + | chr4_4:70216620-70216639 | Msa0699530:intron | 25.0% |
| !! | TTTCCAGTATAATCGAATTT+TGG | + | chr4_4:70217243-70217262 | Msa0699530:intron | 25.0% |
| ! | AATCCAAAATTCGATTATAC+TGG | - | chr4_4:70217249-70217268 | None:intergenic | 25.0% |
| ! | AAAATAAATATGGTGAAAGG+TGG | - | chr4_4:70217359-70217378 | None:intergenic | 25.0% |
| ! | ACCATGTGATAACTAATTAA+CGG | - | chr4_4:70217447-70217466 | None:intergenic | 25.0% |
| ! | TGTGAATATGAATATAGTAC+AGG | - | chr4_4:70217605-70217624 | None:intergenic | 25.0% |
| !! | AAAAAAACTGGTTCAATTAG+CGG | + | chr4_4:70218037-70218056 | Msa0699530:intron | 25.0% |
| ! | CAATTTGGTTAATTGGATTA+CGG | + | chr4_4:70218062-70218081 | Msa0699530:intron | 25.0% |
| ! | TGAAAATTTGAAAGGAAGAA+AGG | - | chr4_4:70218280-70218299 | None:intergenic | 25.0% |
| ! | ATTTAATCTACCCTTCTTAT+GGG | - | chr4_4:70218472-70218491 | None:intergenic | 25.0% |
| !!! | ACAGTTTTAATTAGATTCTC+CGG | - | chr4_4:70218496-70218515 | None:intergenic | 25.0% |
| ! | TAAATGACCCATATTTAGTA+AGG | + | chr4_4:70218531-70218550 | Msa0699530:intron | 25.0% |
| !! | CTCTTTTGAATGATATTCTT+TGG | + | chr4_4:70218722-70218741 | Msa0699530:intron | 25.0% |
| ! | AGCTAAAAATTAGTTAGGTT+TGG | - | chr4_4:70218780-70218799 | None:intergenic | 25.0% |
| ! | AGTAAAGTGAATTTGGATAA+GGG | + | chr4_4:70218859-70218878 | Msa0699530:intron | 25.0% |
| ! | AACAACACAAAAGAAAAACA+TGG | + | chr4_4:70218898-70218917 | Msa0699530:intron | 25.0% |
| ! | ACAACACAAAAGAAAAACAT+GGG | + | chr4_4:70218899-70218918 | Msa0699530:intron | 25.0% |
| ! | CATAAGCTCAAACTTAAATT+TGG | - | chr4_4:70218979-70218998 | None:intergenic | 25.0% |
| ! | GAATTTAGAAATGCTATGAT+TGG | - | chr4_4:70219043-70219062 | None:intergenic | 25.0% |
| ! | GGAAGAAAAAAAAAAACTGT+TGG | - | chr4_4:70219065-70219084 | None:intergenic | 25.0% |
| !!! | TCTATTTTGTTTGAAAGTAG+AGG | + | chr4_4:70219150-70219169 | Msa0699530:intron | 25.0% |
| ! | GAAATAACATGACACTAATA+TGG | - | chr4_4:70219629-70219648 | None:intergenic | 25.0% |
| ! | AATAAAACATTTAAACCCCA+TGG | - | chr4_4:70219697-70219716 | None:intergenic | 25.0% |
| AAAGAAGGAAGAGAAGAAAA+TGG | + | chr4_4:70213800-70213819 | Msa0699530:exon | 30.0% | |
| AAGAAGGAAGAGAAGAAAAT+GGG | + | chr4_4:70213801-70213820 | Msa0699530:exon | 30.0% | |
| ! | TTTTCCACCGTTTTCAATTT+TGG | + | chr4_4:70213998-70214017 | Msa0699530:intron | 30.0% |
| ! | TTTCCACCGTTTTCAATTTT+GGG | + | chr4_4:70213999-70214018 | Msa0699530:intron | 30.0% |
| AATTTACCTGTTACACAGAA+TGG | - | chr4_4:70214170-70214189 | None:intergenic | 30.0% | |
| !! | ATTGTCACTTGTTTCAGTTT+TGG | + | chr4_4:70214347-70214366 | Msa0699530:intron | 30.0% |
| ! | CAATTTGTTCAAATTCAGCT+AGG | - | chr4_4:70214476-70214495 | None:intergenic | 30.0% |
| CTAGCTGAATTTGAACAAAT+TGG | + | chr4_4:70214474-70214493 | Msa0699530:intron | 30.0% | |
| ! | AAATACTGACTATAGCATAG+TGG | + | chr4_4:70214536-70214555 | Msa0699530:intron | 30.0% |
| ATGCTAACCAAAATCATAAG+AGG | - | chr4_4:70214732-70214751 | None:intergenic | 30.0% | |
| ATTCTTCTGACTGTTGTAAT+GGG | + | chr4_4:70214782-70214801 | Msa0699530:intron | 30.0% | |
| !! | TTCATTTTTCTATTGAAGCG+AGG | - | chr4_4:70214845-70214864 | None:intergenic | 30.0% |
| TAACTAGAAAGGAAAACCAT+TGG | - | chr4_4:70215126-70215145 | None:intergenic | 30.0% | |
| AGCAAGATGTTTAACTAGAA+AGG | - | chr4_4:70215137-70215156 | None:intergenic | 30.0% | |
| GAAAATATTTATACTCGCTC+GGG | - | chr4_4:70215745-70215764 | None:intergenic | 30.0% | |
| AGTTTATGTACACAGTGAAA+TGG | + | chr4_4:70215882-70215901 | Msa0699530:intron | 30.0% | |
| !! | TATTCCTTTTGAGAAGAGAA+TGG | + | chr4_4:70215916-70215935 | Msa0699530:CDS | 30.0% |
| ! | TTTTCCATTCTCTTCTCAAA+AGG | - | chr4_4:70215923-70215942 | None:intergenic | 30.0% |
| GCAGATAAAAATGAAAAACG+AGG | - | chr4_4:70216164-70216183 | None:intergenic | 30.0% | |
| AAGTTGAATATAGAAGGAAG+TGG | - | chr4_4:70216566-70216585 | None:intergenic | 30.0% | |
| TCCTTCTATATTCAACTTGA+AGG | + | chr4_4:70216568-70216587 | Msa0699530:CDS | 30.0% | |
| CCTTCTATATTCAACTTGAA+GGG | + | chr4_4:70216569-70216588 | Msa0699530:CDS | 30.0% | |
| !! | CGTTTATTTTCTTGTTTGAC+AGG | + | chr4_4:70216668-70216687 | Msa0699530:intron | 30.0% |
| GAGGTATGTAACTTATCTTA+TGG | + | chr4_4:70217172-70217191 | Msa0699530:intron | 30.0% | |
| TTTCTTCTCATGTCGTTAAT+TGG | + | chr4_4:70217741-70217760 | Msa0699530:intron | 30.0% | |
| TTCTTCTCATGTCGTTAATT+GGG | + | chr4_4:70217742-70217761 | Msa0699530:intron | 30.0% | |
| ATATACATCACCAAAACTAC+AGG | - | chr4_4:70217936-70217955 | None:intergenic | 30.0% | |
| TAATTGGATTACGGTTCAAA+TGG | + | chr4_4:70218071-70218090 | Msa0699530:intron | 30.0% | |
| AATTGGATTACGGTTCAAAT+GGG | + | chr4_4:70218072-70218091 | Msa0699530:intron | 30.0% | |
| CAATGTTTAAAAATCTGGAC+CGG | - | chr4_4:70218136-70218155 | None:intergenic | 30.0% | |
| ! | TGATACATCTAACCAGATTT+TGG | + | chr4_4:70218154-70218173 | Msa0699530:intron | 30.0% |
| TCAAACAAATCTCCAAAATC+TGG | - | chr4_4:70218169-70218188 | None:intergenic | 30.0% | |
| !!! | CTTAAGGATCAGTTTTAAAG+AGG | + | chr4_4:70218318-70218337 | Msa0699530:intron | 30.0% |
| TATAAGAATGTTGTGATGTG+TGG | + | chr4_4:70218370-70218389 | Msa0699530:intron | 30.0% | |
| ATAAGAATGTTGTGATGTGT+GGG | + | chr4_4:70218371-70218390 | Msa0699530:intron | 30.0% | |
| CAATCACATAAGACAAGATT+AGG | + | chr4_4:70218398-70218417 | Msa0699530:intron | 30.0% | |
| TTTACAATCACCCATAAGAA+GGG | + | chr4_4:70218459-70218478 | Msa0699530:intron | 30.0% | |
| CATTTAATCTACCCTTCTTA+TGG | - | chr4_4:70218473-70218492 | None:intergenic | 30.0% | |
| TCCTGAACCTTACTAAATAT+GGG | - | chr4_4:70218541-70218560 | None:intergenic | 30.0% | |
| ATCCTGAACCTTACTAAATA+TGG | - | chr4_4:70218542-70218561 | None:intergenic | 30.0% | |
| TATTTAGTAAGGTTCAGGAT+AGG | + | chr4_4:70218542-70218561 | Msa0699530:intron | 30.0% | |
| !! | ATATTCTTTGGTTCTGTATG+TGG | + | chr4_4:70218734-70218753 | Msa0699530:intron | 30.0% |
| !! | TATTCTTTGGTTCTGTATGT+GGG | + | chr4_4:70218735-70218754 | Msa0699530:intron | 30.0% |
| AAATTAGTTAGGTTTGGACT+TGG | - | chr4_4:70218774-70218793 | None:intergenic | 30.0% | |
| !!! | TTTTAGCTTAGTATAAGGGT+AGG | + | chr4_4:70218792-70218811 | Msa0699530:intron | 30.0% |
| ! | TTTAGCTTAGTATAAGGGTA+GGG | + | chr4_4:70218793-70218812 | Msa0699530:intron | 30.0% |
| TTACTGTCATTGGAAATTTC+TGG | - | chr4_4:70218844-70218863 | None:intergenic | 30.0% | |
| CAAATTCACTTTACTGTCAT+TGG | - | chr4_4:70218854-70218873 | None:intergenic | 30.0% | |
| CAATGACAGTAAAGTGAATT+TGG | + | chr4_4:70218852-70218871 | Msa0699530:intron | 30.0% | |
| CAGTAAAGTGAATTTGGATA+AGG | + | chr4_4:70218858-70218877 | Msa0699530:intron | 30.0% | |
| CAACACAAAAGAAAAACATG+GGG | + | chr4_4:70218900-70218919 | Msa0699530:intron | 30.0% | |
| AACACAAAAGAAAAACATGG+GGG | + | chr4_4:70218901-70218920 | Msa0699530:intron | 30.0% | |
| ACACAAACAATATCAATCTC+AGG | - | chr4_4:70219243-70219262 | None:intergenic | 30.0% | |
| GATATTGTTTGTGTTTCCAT+AGG | + | chr4_4:70219249-70219268 | Msa0699530:intron | 30.0% | |
| TTCTGTTAGTTAATGAGAGA+AGG | + | chr4_4:70219524-70219543 | Msa0699530:three_prime_UTR | 30.0% | |
| CCTACTTTATGACAGAAAAA+AGG | - | chr4_4:70219566-70219585 | None:intergenic | 30.0% | |
| !!! | CCTTTTTTCTGTCATAAAGT+AGG | + | chr4_4:70219563-70219582 | Msa0699530:three_prime_UTR | 30.0% |
| ! | TTGACACTTAAGGTAGATTT+TGG | + | chr4_4:70219669-70219688 | Msa0699530:three_prime_UTR | 30.0% |
| TCTATCTAATCTGACAGAGA+AGG | + | chr4_4:70213777-70213796 | Msa0699530:five_prime_UTR | 35.0% | |
| !! | AAATGGGAAGAAGTGTCTTA+TGG | + | chr4_4:70213817-70213836 | Msa0699530:exon | 35.0% |
| TTTATTGGCGTAAAGAGGAA+CGG | - | chr4_4:70213922-70213941 | None:intergenic | 35.0% | |
| CGATGACCCAAAATTGAAAA+CGG | - | chr4_4:70214008-70214027 | None:intergenic | 35.0% | |
| !! | TCATTAATATGGCGTTGACA+TGG | - | chr4_4:70214065-70214084 | None:intergenic | 35.0% |
| !! | ACTTGTTTCAGTTTTGGCAA+TGG | + | chr4_4:70214353-70214372 | Msa0699530:intron | 35.0% |
| ! | AGATCAATGCCTTACCTTTT+CGG | + | chr4_4:70214395-70214414 | Msa0699530:intron | 35.0% |
| GATGTTTATCCGAAAAGGTA+AGG | - | chr4_4:70214407-70214426 | None:intergenic | 35.0% | |
| AGCAAGATGTTTATCCGAAA+AGG | - | chr4_4:70214412-70214431 | None:intergenic | 35.0% | |
| ! | TATTTTCTGCCTTGTGTGAT+TGG | + | chr4_4:70214575-70214594 | Msa0699530:intron | 35.0% |
| AAACTCAATCCAATCACACA+AGG | - | chr4_4:70214587-70214606 | None:intergenic | 35.0% | |
| TTTATACCAGAAACCTCTAG+TGG | + | chr4_4:70214687-70214706 | Msa0699530:intron | 35.0% | |
| ! | TTGCAGTCCTCTTATGATTT+TGG | + | chr4_4:70214722-70214741 | Msa0699530:intron | 35.0% |
| CATTCTTCTGACTGTTGTAA+TGG | + | chr4_4:70214781-70214800 | Msa0699530:intron | 35.0% | |
| TAACTTATGACACATGCAAG+TGG | + | chr4_4:70214817-70214836 | Msa0699530:intron | 35.0% | |
| ACATGAATCTAATGCGAATC+TGG | + | chr4_4:70214900-70214919 | Msa0699530:intron | 35.0% | |
| ! | CTCTTGTTTGGTTGATTACT+TGG | + | chr4_4:70215041-70215060 | Msa0699530:intron | 35.0% |
| GTTATAACACTGTAGAGTAG+CGG | + | chr4_4:70215264-70215283 | Msa0699530:intron | 35.0% | |
| ACTATCTGCAATTGACAACA+CGG | + | chr4_4:70215310-70215329 | Msa0699530:intron | 35.0% | |
| GCAAGTCATCGTAATACATT+TGG | - | chr4_4:70215676-70215695 | None:intergenic | 35.0% | |
| ATTGGAACTGTTGACAAAGA+AGG | + | chr4_4:70215710-70215729 | Msa0699530:CDS | 35.0% | |
| AACTGTTGACAAAGAAGGAA+AGG | + | chr4_4:70215715-70215734 | Msa0699530:CDS | 35.0% | |
| TATGTACACAGTGAAATGGA+AGG | + | chr4_4:70215886-70215905 | Msa0699530:intron | 35.0% | |
| GCAAATATGGACTTGAACTT+AGG | - | chr4_4:70216281-70216300 | None:intergenic | 35.0% | |
| !! | CTTCATTTTTATGCTTGCAC+TGG | + | chr4_4:70216450-70216469 | Msa0699530:CDS | 35.0% |
| !! | ATTTTTATGCTTGCACTGGT+TGG | + | chr4_4:70216454-70216473 | Msa0699530:CDS | 35.0% |
| !! | CCCTTCAAGTTGAATATAGA+AGG | - | chr4_4:70216572-70216591 | None:intergenic | 35.0% |
| TTCAACTTGAAGGGACTAAT+TGG | + | chr4_4:70216578-70216597 | Msa0699530:CDS | 35.0% | |
| TCAACTTGAAGGGACTAATT+GGG | + | chr4_4:70216579-70216598 | Msa0699530:CDS | 35.0% | |
| GTTAGAAACTTATTGCTGAC+AGG | + | chr4_4:70216690-70216709 | Msa0699530:CDS | 35.0% | |
| AGCAGAACATAAGGAAAAGA+GGG | - | chr4_4:70216731-70216750 | None:intergenic | 35.0% | |
| AAGCAGAACATAAGGAAAAG+AGG | - | chr4_4:70216732-70216751 | None:intergenic | 35.0% | |
| TGTTAAGGAAGCAGAACATA+AGG | - | chr4_4:70216740-70216759 | None:intergenic | 35.0% | |
| TTTGCGTGATAGTCCTAATA+TGG | + | chr4_4:70216808-70216827 | Msa0699530:CDS | 35.0% | |
| ATTCCACCTAACACAAGTAA+TGG | - | chr4_4:70216849-70216868 | None:intergenic | 35.0% | |
| ! | ACTACATTTTTGCTAGTGTC+TGG | + | chr4_4:70217021-70217040 | Msa0699530:intron | 35.0% |
| ! | CTACATTTTTGCTAGTGTCT+GGG | + | chr4_4:70217022-70217041 | Msa0699530:intron | 35.0% |
| ! | TACATTTTTGCTAGTGTCTG+GGG | + | chr4_4:70217023-70217042 | Msa0699530:intron | 35.0% |
| TGTAGATAGTGTAAATCCTG+TGG | - | chr4_4:70217049-70217068 | None:intergenic | 35.0% | |
| TTACTACATATCATCTGTGC+CGG | + | chr4_4:70217421-70217440 | Msa0699530:intron | 35.0% | |
| TGTGATAACTAATTAACGGC+CGG | - | chr4_4:70217443-70217462 | None:intergenic | 35.0% | |
| GCCGTTAATTAGTTATCACA+TGG | + | chr4_4:70217443-70217462 | Msa0699530:intron | 35.0% | |
| TAGTTATCACATGGTCTGTT+AGG | + | chr4_4:70217452-70217471 | Msa0699530:intron | 35.0% | |
| AATTGTCTTCGACTCTATGT+AGG | + | chr4_4:70217483-70217502 | Msa0699530:intron | 35.0% | |
| ATTGTCTTCGACTCTATGTA+GGG | + | chr4_4:70217484-70217503 | Msa0699530:intron | 35.0% | |
| TGAATACATGCTCTATTTGG+TGG | - | chr4_4:70217846-70217865 | None:intergenic | 35.0% | |
| CCTTGAATACATGCTCTATT+TGG | - | chr4_4:70217849-70217868 | None:intergenic | 35.0% | |
| CCAAATAGAGCATGTATTCA+AGG | + | chr4_4:70217846-70217865 | Msa0699530:intron | 35.0% | |
| ATCGTACATGTCACACTTTA+TGG | - | chr4_4:70217883-70217902 | None:intergenic | 35.0% | |
| ! | TACTTCAATGCCTGTAGTTT+TGG | + | chr4_4:70217923-70217942 | Msa0699530:intron | 35.0% |
| GTTCAATTAGCGGTTCAATT+TGG | + | chr4_4:70218047-70218066 | Msa0699530:intron | 35.0% | |
| AGCGGTTCAATTTGGTTAAT+TGG | + | chr4_4:70218055-70218074 | Msa0699530:intron | 35.0% | |
| AGGATAACTTCACTATTGCT+GGG | - | chr4_4:70218248-70218267 | None:intergenic | 35.0% | |
| AAGGATAACTTCACTATTGC+TGG | - | chr4_4:70218249-70218268 | None:intergenic | 35.0% | |
| AGGAAGAAAGGAGAGAAAAA+AGG | - | chr4_4:70218268-70218287 | None:intergenic | 35.0% | |
| CTGAATGAATAAGCGACTTA+AGG | + | chr4_4:70218302-70218321 | Msa0699530:intron | 35.0% | |
| ATTCTTATATCTGCCACACA+AGG | - | chr4_4:70218359-70218378 | None:intergenic | 35.0% | |
| CTTCTTATGGGTGATTGTAA+AGG | - | chr4_4:70218460-70218479 | None:intergenic | 35.0% | |
| CTTTACAATCACCCATAAGA+AGG | + | chr4_4:70218458-70218477 | Msa0699530:intron | 35.0% | |
| AAGAAGGGTAGATTAAATGC+CGG | + | chr4_4:70218474-70218493 | Msa0699530:intron | 35.0% | |
| ACCCATATTTAGTAAGGTTC+AGG | + | chr4_4:70218537-70218556 | Msa0699530:intron | 35.0% | |
| TAACCTTGTCTAGTGAGAAT+TGG | + | chr4_4:70218594-70218613 | Msa0699530:intron | 35.0% | |
| TACATCAGTTGTGTGTAAAG+TGG | + | chr4_4:70218655-70218674 | Msa0699530:intron | 35.0% | |
| ! | AAATTTCTGGATTTGCCCAT+GGG | - | chr4_4:70218831-70218850 | None:intergenic | 35.0% |
| TTGGATAAGGGAATTACTCA+AGG | + | chr4_4:70218871-70218890 | Msa0699530:intron | 35.0% | |
| TGGATAAGGGAATTACTCAA+GGG | + | chr4_4:70218872-70218891 | Msa0699530:intron | 35.0% | |
| ACACAAAAGAAAAACATGGG+GGG | + | chr4_4:70218902-70218921 | Msa0699530:intron | 35.0% | |
| ATACATGAGCTCATATCAAC+AGG | - | chr4_4:70219002-70219021 | None:intergenic | 35.0% | |
| ! | TTACCTCAATTGTGTTGACA+TGG | + | chr4_4:70219203-70219222 | Msa0699530:intron | 35.0% |
| ! | TACCTCAATTGTGTTGACAT+GGG | + | chr4_4:70219204-70219223 | Msa0699530:intron | 35.0% |
| ! | TTCCATAGGTCTTTTCTTTG+TGG | + | chr4_4:70219263-70219282 | Msa0699530:intron | 35.0% |
| ! | TCAACTGGCTTATTCATCTA+CGG | + | chr4_4:70219290-70219309 | Msa0699530:CDS | 35.0% |
| ATGCAAACTTCGTTCTTCTT+TGG | + | chr4_4:70219359-70219378 | Msa0699530:CDS | 35.0% | |
| ! | GTAGTTGTGGTTGAATGTTT+TGG | + | chr4_4:70219487-70219506 | Msa0699530:exon | 35.0% |
| TCAAAGCTTCTGTTGTTATC+AGG | - | chr4_4:70219601-70219620 | None:intergenic | 35.0% | |
| !!! | TAAGGTAGATTTTGGAACCA+TGG | + | chr4_4:70219677-70219696 | Msa0699530:three_prime_UTR | 35.0% |
| !!! | AAGGTAGATTTTGGAACCAT+GGG | + | chr4_4:70219678-70219697 | Msa0699530:three_prime_UTR | 35.0% |
| ATCTGACAGAGAAGGAAAGA+AGG | + | chr4_4:70213785-70213804 | Msa0699530:five_prime_UTR | 40.0% | |
| CCTCTTTACGCCAATAAAGT+CGG | + | chr4_4:70213924-70213943 | Msa0699530:CDS | 40.0% | |
| ATTGAAAAGAGATCGGACCT+GGG | - | chr4_4:70213963-70213982 | None:intergenic | 40.0% | |
| AATTGAAAAGAGATCGGACC+TGG | - | chr4_4:70213964-70213983 | None:intergenic | 40.0% | |
| TGACCCAAAATTGAAAACGG+TGG | - | chr4_4:70214005-70214024 | None:intergenic | 40.0% | |
| !! | TAATATGGCGTTGACATGGA+AGG | - | chr4_4:70214061-70214080 | None:intergenic | 40.0% |
| TTACACAGAATGGAAGGTCA+AGG | - | chr4_4:70214160-70214179 | None:intergenic | 40.0% | |
| TACCTGTTACACAGAATGGA+AGG | - | chr4_4:70214166-70214185 | None:intergenic | 40.0% | |
| ATGTATGCATGAGCTTCATG+AGG | - | chr4_4:70214291-70214310 | None:intergenic | 40.0% | |
| ATAACATACAACGCCACTAG+AGG | - | chr4_4:70214703-70214722 | None:intergenic | 40.0% | |
| GTCATAAGTTACAGACAACC+AGG | - | chr4_4:70214808-70214827 | None:intergenic | 40.0% | |
| ! | ACGGGCTAAACAAAGTTCAA+AGG | - | chr4_4:70214967-70214986 | None:intergenic | 40.0% |
| TTGTCACATAACTGCTACAG+AGG | + | chr4_4:70215240-70215259 | Msa0699530:intron | 40.0% | |
| ! | CATTCGGACACACTCATTTT+AGG | - | chr4_4:70215471-70215490 | None:intergenic | 40.0% |
| ! | GTCTTTTCTTTCTCATGACC+TGG | - | chr4_4:70215494-70215513 | None:intergenic | 40.0% |
| ! | AAAGAAAAGACTGAAGCGCT+TGG | + | chr4_4:70215503-70215522 | Msa0699530:CDS | 40.0% |
| !! | GTTCATAAGGAGCACTAACA+AGG | - | chr4_4:70215550-70215569 | None:intergenic | 40.0% |
| !! | AGTCCTTTTTAACTGCCTCT+CGG | - | chr4_4:70215646-70215665 | None:intergenic | 40.0% |
| ! | ATTACGATGACTTGCCAATC+TGG | + | chr4_4:70215681-70215700 | Msa0699530:CDS | 40.0% |
| ! | TTACGATGACTTGCCAATCT+GGG | + | chr4_4:70215682-70215701 | Msa0699530:CDS | 40.0% |
| TTGCCAATCTGGGGATTTAT+TGG | + | chr4_4:70215692-70215711 | Msa0699530:CDS | 40.0% | |
| GTTCCAATAAATCCCCAGAT+TGG | - | chr4_4:70215698-70215717 | None:intergenic | 40.0% | |
| TTCTTCTCTTCCACATCACT+TGG | + | chr4_4:70215955-70215974 | Msa0699530:CDS | 40.0% | |
| CATCATAAACTCCTGTGTGA+CGG | + | chr4_4:70215994-70216013 | Msa0699530:CDS | 40.0% | |
| !!! | TCTTCTTTTGACTGGTTTCC+TGG | + | chr4_4:70216018-70216037 | Msa0699530:CDS | 40.0% |
| ! | ACAGGATGGAAGTACATTCA+CGG | + | chr4_4:70216239-70216258 | Msa0699530:CDS | 40.0% |
| TGGACTTGAACTTAGGAAAC+CGG | - | chr4_4:70216274-70216293 | None:intergenic | 40.0% | |
| AATAAAGCTCCTCGGTTGTA+GGG | - | chr4_4:70216490-70216509 | None:intergenic | 40.0% | |
| AAATAAAGCTCCTCGGTTGT+AGG | - | chr4_4:70216491-70216510 | None:intergenic | 40.0% | |
| GTGCAGTAAATAAAGCTCCT+CGG | - | chr4_4:70216498-70216517 | None:intergenic | 40.0% | |
| !! | AGCTTTATTTACTGCACTCG+TGG | + | chr4_4:70216501-70216520 | Msa0699530:CDS | 40.0% |
| GTCATATATGCTCTCACATC+TGG | + | chr4_4:70216523-70216542 | Msa0699530:CDS | 40.0% | |
| AAGCGATTGCAACTGTGTTA+AGG | - | chr4_4:70216755-70216774 | None:intergenic | 40.0% | |
| GCAAATTGTGCCAAAAGGAA+GGG | - | chr4_4:70216793-70216812 | None:intergenic | 40.0% | |
| ATCACGCAAATTGTGCCAAA+AGG | - | chr4_4:70216798-70216817 | None:intergenic | 40.0% | |
| AAGTTACCAGCGTCCATATT+AGG | - | chr4_4:70216824-70216843 | None:intergenic | 40.0% | |
| ACTTCGCCATTACTTGTGTT+AGG | + | chr4_4:70216840-70216859 | Msa0699530:CDS | 40.0% | |
| AAGGAAGAGGTGGAATTTCT+CGG | - | chr4_4:70216929-70216948 | None:intergenic | 40.0% | |
| ! | CTATGTAGATGGCACTGAAT+GGG | - | chr4_4:70216995-70217014 | None:intergenic | 40.0% |
| ! | TCTATGTAGATGGCACTGAA+TGG | - | chr4_4:70216996-70217015 | None:intergenic | 40.0% |
| GTAGTACAGCTCTATGTAGA+TGG | - | chr4_4:70217006-70217025 | None:intergenic | 40.0% | |
| TTGCTGCAGAAGATCATGAA+TGG | + | chr4_4:70217144-70217163 | Msa0699530:CDS | 40.0% | |
| TTGTCTTCGACTCTATGTAG+GGG | + | chr4_4:70217485-70217504 | Msa0699530:intron | 40.0% | |
| CATGAGAAGAAAGAGATGAG+TGG | - | chr4_4:70217733-70217752 | None:intergenic | 40.0% | |
| AATCAAACCAGCTAGACCTT+CGG | + | chr4_4:70217970-70217989 | Msa0699530:intron | 40.0% | |
| TGTTTGAAAGCCTTGAGTGT+AGG | + | chr4_4:70218182-70218201 | Msa0699530:intron | 40.0% | |
| AAAGCCTTGAGTGTAGGTTA+GGG | + | chr4_4:70218188-70218207 | Msa0699530:intron | 40.0% | |
| GGTTAGGGAGTTTATGTGAT+TGG | + | chr4_4:70218203-70218222 | Msa0699530:intron | 40.0% | |
| ACTATTGCTGGGTCACAAAT+TGG | - | chr4_4:70218237-70218256 | None:intergenic | 40.0% | |
| ! | ACACAAAAGTAAGCCTTGTG+TGG | + | chr4_4:70218343-70218362 | Msa0699530:intron | 40.0% |
| GGGTGATTGTAAAGGTCATT+TGG | - | chr4_4:70218452-70218471 | None:intergenic | 40.0% | |
| ! | GAAATTTCTGGATTTGCCCA+TGG | - | chr4_4:70218832-70218851 | None:intergenic | 40.0% |
| GGATAAGGGAATTACTCAAG+GGG | + | chr4_4:70218873-70218892 | Msa0699530:intron | 40.0% | |
| GGACAAACATTTCACATCTC+AGG | - | chr4_4:70219086-70219105 | None:intergenic | 40.0% | |
| CACCACAAAGAAAAGACCTA+TGG | - | chr4_4:70219268-70219287 | None:intergenic | 40.0% | |
| ! | CATAGGTCTTTTCTTTGTGG+TGG | + | chr4_4:70219266-70219285 | Msa0699530:intron | 40.0% |
| !! | TTTCTTTGTGGTGGATCAAC+TGG | + | chr4_4:70219275-70219294 | Msa0699530:CDS | 40.0% |
| TACGCAAGATCAGATATGTC+TGG | + | chr4_4:70219332-70219351 | Msa0699530:CDS | 40.0% | |
| TTCGTTCTTCTTTGGCTACA+TGG | + | chr4_4:70219367-70219386 | Msa0699530:CDS | 40.0% | |
| TATGGCTTCTTTCTCATGCT+CGG | + | chr4_4:70219401-70219420 | Msa0699530:CDS | 40.0% | |
| TTGCACAAGCTTGACACTTA+AGG | + | chr4_4:70219659-70219678 | Msa0699530:three_prime_UTR | 40.0% | |
| !!! | AGGTAGATTTTGGAACCATG+GGG | + | chr4_4:70219679-70219698 | Msa0699530:three_prime_UTR | 40.0% |
| CCGACTTTATTGGCGTAAAG+AGG | - | chr4_4:70213927-70213946 | None:intergenic | 45.0% | |
| ! | GTGAAAGGGACCGACTTTAT+TGG | - | chr4_4:70213937-70213956 | None:intergenic | 45.0% |
| GACCTTCCATTCTGTGTAAC+AGG | + | chr4_4:70214161-70214180 | Msa0699530:CDS | 45.0% | |
| ! | TAGCTGCTGTTTGACAACAC+TGG | - | chr4_4:70215167-70215186 | None:intergenic | 45.0% |
| CTTTCTCATGACCTGGCATT+CGG | - | chr4_4:70215487-70215506 | None:intergenic | 45.0% | |
| GCAAGTTAATCAGTTCCGAG+AGG | + | chr4_4:70215628-70215647 | Msa0699530:CDS | 45.0% | |
| GTTCCGAGAGGCAGTTAAAA+AGG | + | chr4_4:70215640-70215659 | Msa0699530:intron | 45.0% | |
| ! | TACGATGACTTGCCAATCTG+GGG | + | chr4_4:70215683-70215702 | Msa0699530:CDS | 45.0% |
| GATTGAAATCAGTGCCCGTA+TGG | + | chr4_4:70215811-70215830 | Msa0699530:CDS | 45.0% | |
| TCAGGTCAACCACAGAATGA+GGG | - | chr4_4:70215838-70215857 | None:intergenic | 45.0% | |
| CAGTGAATCTCCAAGTGATG+TGG | - | chr4_4:70215968-70215987 | None:intergenic | 45.0% | |
| CACATCACTTGGAGATTCAC+TGG | + | chr4_4:70215966-70215985 | Msa0699530:CDS | 45.0% | |
| CGTCACACAGGAGTTTATGA+TGG | - | chr4_4:70215996-70216015 | None:intergenic | 45.0% | |
| CAAAAGAAGAACCGTCACAC+AGG | - | chr4_4:70216008-70216027 | None:intergenic | 45.0% | |
| ! | GTGACGGTTCTTCTTTTGAC+TGG | + | chr4_4:70216010-70216029 | Msa0699530:CDS | 45.0% |
| CTTCAAGACACGCATGAGAA+TGG | - | chr4_4:70216047-70216066 | None:intergenic | 45.0% | |
| TTCCTCGTCTTGAGCATATC+TGG | - | chr4_4:70216198-70216217 | None:intergenic | 45.0% | |
| ATGATCAAGAGGAGACAGGA+TGG | + | chr4_4:70216225-70216244 | Msa0699530:CDS | 45.0% | |
| ! | ACATTCACGGCGATGTTTTC+CGG | + | chr4_4:70216252-70216271 | Msa0699530:CDS | 45.0% |
| CAGAGTGAATAACTGAGTGC+CGG | - | chr4_4:70216318-70216337 | None:intergenic | 45.0% | |
| GTATTCTATCCCTACAACCG+AGG | + | chr4_4:70216478-70216497 | Msa0699530:CDS | 45.0% | |
| CGCAAATTGTGCCAAAAGGA+AGG | - | chr4_4:70216794-70216813 | None:intergenic | 45.0% | |
| GATAGTCCTAATATGGACGC+TGG | + | chr4_4:70216815-70216834 | Msa0699530:CDS | 45.0% | |
| TCGCCATTACTTGTGTTAGG+TGG | + | chr4_4:70216843-70216862 | Msa0699530:intron | 45.0% | |
| CTTGTGTTAGGTGGAATTGC+AGG | + | chr4_4:70216852-70216871 | Msa0699530:intron | 45.0% | |
| GGATATTTAGTAGTGCGGAC+AGG | - | chr4_4:70216906-70216925 | None:intergenic | 45.0% | |
| CTCGGGGATATTTAGTAGTG+CGG | - | chr4_4:70216911-70216930 | None:intergenic | 45.0% | |
| AGGAAGAGGTGGAATTTCTC+GGG | - | chr4_4:70216928-70216947 | None:intergenic | 45.0% | |
| GAGAAATTCCACCTCTTCCT+TGG | + | chr4_4:70216928-70216947 | Msa0699530:CDS | 45.0% | |
| CTGCAGAAGATCATGAATGG+TGG | + | chr4_4:70217147-70217166 | Msa0699530:CDS | 45.0% | |
| CAGAAGATCATGAATGGTGG+TGG | + | chr4_4:70217150-70217169 | Msa0699530:CDS | 45.0% | |
| !! | AAGATCATGAATGGTGGTGG+AGG | + | chr4_4:70217153-70217172 | Msa0699530:CDS | 45.0% |
| TGTCTTCGACTCTATGTAGG+GGG | + | chr4_4:70217486-70217505 | Msa0699530:intron | 45.0% | |
| CACATGCTCCTTGATGTTGA+GGG | - | chr4_4:70217770-70217789 | None:intergenic | 45.0% | |
| ACACATGCTCCTTGATGTTG+AGG | - | chr4_4:70217771-70217790 | None:intergenic | 45.0% | |
| ATCAAACCAGCTAGACCTTC+GGG | + | chr4_4:70217971-70217990 | Msa0699530:intron | 45.0% | |
| AAAATCTGGACCGGTTGAAC+CGG | - | chr4_4:70218127-70218146 | None:intergenic | 45.0% | |
| GAAAGCCTTGAGTGTAGGTT+AGG | + | chr4_4:70218187-70218206 | Msa0699530:intron | 45.0% | |
| AACTCCCTAACCTACACTCA+AGG | - | chr4_4:70218195-70218214 | None:intergenic | 45.0% | |
| ATTGCTGGGTCACAAATTGG+AGG | - | chr4_4:70218234-70218253 | None:intergenic | 45.0% | |
| GAGCCAATTCTCACTAGACA+AGG | - | chr4_4:70218600-70218619 | None:intergenic | 45.0% | |
| ! | TGTCTAGTGAGAATTGGCTC+TGG | + | chr4_4:70218600-70218619 | Msa0699530:intron | 45.0% |
| TTAGTATAAGGGTAGGGCCA+TGG | + | chr4_4:70218799-70218818 | Msa0699530:intron | 45.0% | |
| CTATGATCAGAAACCCCAAG+TGG | - | chr4_4:70218946-70218965 | None:intergenic | 45.0% | |
| CACTTGGGGTTTCTGATCAT+AGG | + | chr4_4:70218944-70218963 | Msa0699530:intron | 45.0% | |
| CTCCCATGTCAACACAATTG+AGG | - | chr4_4:70219209-70219228 | None:intergenic | 45.0% | |
| AAAGAAGCCATAGCAGATGC+AGG | - | chr4_4:70219393-70219412 | None:intergenic | 45.0% | |
| TCTTTGTCCGCCACATATAC+CGG | + | chr4_4:70219450-70219469 | Msa0699530:CDS | 45.0% | |
| ! | ACTTGATGGACCGGTATATG+TGG | - | chr4_4:70219463-70219482 | None:intergenic | 45.0% |
| ! | ACTACTCACACTTGATGGAC+CGG | - | chr4_4:70219472-70219491 | None:intergenic | 45.0% |
| CCACAACTACTCACACTTGA+TGG | - | chr4_4:70219477-70219496 | None:intergenic | 45.0% | |
| CCATCAAGTGTGAGTAGTTG+TGG | + | chr4_4:70219474-70219493 | Msa0699530:exon | 45.0% | |
| ! | GTAACGATGATCGGAGGCAT+CGG | - | chr4_4:70213886-70213905 | None:intergenic | 50.0% |
| TCCGATCATCGTTACAGCGA+CGG | + | chr4_4:70213891-70213910 | Msa0699530:CDS | 50.0% | |
| TCGGACCTGGGATTGTGAAA+GGG | - | chr4_4:70213951-70213970 | None:intergenic | 50.0% | |
| ATCGGACCTGGGATTGTGAA+AGG | - | chr4_4:70213952-70213971 | None:intergenic | 50.0% | |
| ACAACGCCACTAGAGGTTTC+TGG | - | chr4_4:70214696-70214715 | None:intergenic | 50.0% | |
| !! | TCTGACTGTTGTAATGGGCC+TGG | + | chr4_4:70214787-70214806 | Msa0699530:intron | 50.0% |
| AATGAGTGTGTCCGAATGCC+AGG | + | chr4_4:70215473-70215492 | Msa0699530:intron | 50.0% | |
| ! | AAAGACTGAAGCGCTTGGTG+AGG | + | chr4_4:70215508-70215527 | Msa0699530:CDS | 50.0% |
| TCTGCAAGAAGACGCTCACA+AGG | + | chr4_4:70215603-70215622 | Msa0699530:CDS | 50.0% | |
| CTGCAAGAAGACGCTCACAA+GGG | + | chr4_4:70215604-70215623 | Msa0699530:CDS | 50.0% | |
| CACAGAATGAGGGTCCATAC+GGG | - | chr4_4:70215828-70215847 | None:intergenic | 50.0% | |
| CCACAGAATGAGGGTCCATA+CGG | - | chr4_4:70215829-70215848 | None:intergenic | 50.0% | |
| GTCAGGTCAACCACAGAATG+AGG | - | chr4_4:70215839-70215858 | None:intergenic | 50.0% | |
| TTCTGTGGTTGACCTGACTG+AGG | + | chr4_4:70215841-70215860 | Msa0699530:CDS | 50.0% | |
| CACCAGATATGCTCAAGACG+AGG | + | chr4_4:70216193-70216212 | Msa0699530:intron | 50.0% | |
| GGAAGCTGCTGATGATCAAG+AGG | + | chr4_4:70216214-70216233 | Msa0699530:CDS | 50.0% | |
| GCTGATGATCAAGAGGAGAC+AGG | + | chr4_4:70216221-70216240 | Msa0699530:CDS | 50.0% | |
| TCCATATTTGCAGCTGCCCT+TGG | + | chr4_4:70216290-70216309 | Msa0699530:CDS | 50.0% | |
| ACCAAGGGCAGCTGCAAATA+TGG | - | chr4_4:70216294-70216313 | None:intergenic | 50.0% | |
| !! | TAACTGAGTGCCGGAACCAA+GGG | - | chr4_4:70216309-70216328 | None:intergenic | 50.0% |
| !! | ATAACTGAGTGCCGGAACCA+AGG | - | chr4_4:70216310-70216329 | None:intergenic | 50.0% |
| ! | GCTCTCACATCTGGAATTGC+TGG | + | chr4_4:70216532-70216551 | Msa0699530:CDS | 50.0% |
| ! | CTGACAGGATGCCTCTTTTG+TGG | + | chr4_4:70216705-70216724 | Msa0699530:CDS | 50.0% |
| GGAAAAGAGGGCCACAAAAG+AGG | - | chr4_4:70216719-70216738 | None:intergenic | 50.0% | |
| GGAAGAGGTGGAATTTCTCG+GGG | - | chr4_4:70216927-70216946 | None:intergenic | 50.0% | |
| TTCCACCTCTTCCTTGGTAC+AGG | + | chr4_4:70216934-70216953 | Msa0699530:CDS | 50.0% | |
| AAACCCTGCCATTGCCATCT+GGG | - | chr4_4:70216970-70216989 | None:intergenic | 50.0% | |
| CGTCACTGCTTTCATCACTG+TGG | + | chr4_4:70217103-70217122 | Msa0699530:CDS | 50.0% | |
| GTCTTCGACTCTATGTAGGG+GGG | + | chr4_4:70217487-70217506 | Msa0699530:intron | 50.0% | |
| TCTTCGACTCTATGTAGGGG+GGG | + | chr4_4:70217488-70217507 | Msa0699530:intron | 50.0% | |
| ATTGGGCTCCCTCAACATCA+AGG | + | chr4_4:70217759-70217778 | Msa0699530:intron | 50.0% | |
| TCAAACCAGCTAGACCTTCG+GGG | + | chr4_4:70217972-70217991 | Msa0699530:intron | 50.0% | |
| AAATCTGGACCGGTTGAACC+GGG | - | chr4_4:70218126-70218145 | None:intergenic | 50.0% | |
| TTGCCCATGGGTTCATACCA+TGG | - | chr4_4:70218819-70218838 | None:intergenic | 50.0% | |
| GAAAAACATGGGGGGACTTG+AGG | + | chr4_4:70218910-70218929 | Msa0699530:intron | 50.0% | |
| TACATGGCCTGCATCTGCTA+TGG | + | chr4_4:70219383-70219402 | Msa0699530:CDS | 50.0% | |
| TTTCTCATGCTCGGTAGCGT+AGG | + | chr4_4:70219410-70219429 | Msa0699530:CDS | 50.0% | |
| !! | TATGTGGCGGACAAAGAGCA+GGG | - | chr4_4:70219447-70219466 | None:intergenic | 50.0% |
| !! | ATATGTGGCGGACAAAGAGC+AGG | - | chr4_4:70219448-70219467 | None:intergenic | 50.0% |
| ! | TGATGGACCGGTATATGTGG+CGG | - | chr4_4:70219460-70219479 | None:intergenic | 50.0% |
| CGAGAAGAGAGATCAGCAGG+TGG | - | chr4_4:70213845-70213864 | None:intergenic | 55.0% | |
| CAGCGAGAAGAGAGATCAGC+AGG | - | chr4_4:70213848-70213867 | None:intergenic | 55.0% | |
| GTCGCTGTAACGATGATCGG+AGG | - | chr4_4:70213892-70213911 | None:intergenic | 55.0% | |
| GCCGTCGCTGTAACGATGAT+CGG | - | chr4_4:70213895-70213914 | None:intergenic | 55.0% | |
| TCGGTCCCTTTCACAATCCC+AGG | + | chr4_4:70213943-70213962 | Msa0699530:CDS | 55.0% | |
| !! | GCGCTTGGTGAGGTGTTGAA+TGG | + | chr4_4:70215518-70215537 | Msa0699530:CDS | 55.0% |
| CCGTATGGACCCTCATTCTG+TGG | + | chr4_4:70215826-70215845 | Msa0699530:CDS | 55.0% | |
| TGGTTGACCTGACTGAGGAC+AGG | + | chr4_4:70215846-70215865 | Msa0699530:CDS | 55.0% | |
| GGTTGACCTGACTGAGGACA+GGG | + | chr4_4:70215847-70215866 | Msa0699530:CDS | 55.0% | |
| CACGCATGAGAATGGTTGCC+AGG | - | chr4_4:70216039-70216058 | None:intergenic | 55.0% | |
| TTTGCAGCTGCCCTTGGTTC+CGG | + | chr4_4:70216296-70216315 | Msa0699530:CDS | 55.0% | |
| ! | GCAACTGCTGCCCTTCCTTT+TGG | + | chr4_4:70216780-70216799 | Msa0699530:CDS | 55.0% |
| TAGTAGTGCGGACAGGTGCT+TGG | - | chr4_4:70216899-70216918 | None:intergenic | 55.0% | |
| CTCCTGTACCAAGGAAGAGG+TGG | - | chr4_4:70216939-70216958 | None:intergenic | 55.0% | |
| GTGCTCCTGTACCAAGGAAG+AGG | - | chr4_4:70216942-70216961 | None:intergenic | 55.0% | |
| GGAATGGTGCTCCTGTACCA+AGG | - | chr4_4:70216948-70216967 | None:intergenic | 55.0% | |
| CACCATTCCCCAGATGGCAA+TGG | + | chr4_4:70216959-70216978 | Msa0699530:CDS | 55.0% | |
| TGCCATTGCCATCTGGGGAA+TGG | - | chr4_4:70216964-70216983 | None:intergenic | 55.0% | |
| ATTCCCCAGATGGCAATGGC+AGG | + | chr4_4:70216963-70216982 | Msa0699530:CDS | 55.0% | |
| TTCCCCAGATGGCAATGGCA+GGG | + | chr4_4:70216964-70216983 | Msa0699530:CDS | 55.0% | |
| AACCCTGCCATTGCCATCTG+GGG | - | chr4_4:70216969-70216988 | None:intergenic | 55.0% | |
| GAAACCCTGCCATTGCCATC+TGG | - | chr4_4:70216971-70216990 | None:intergenic | 55.0% | |
| CTTCGACTCTATGTAGGGGG+GGG | + | chr4_4:70217489-70217508 | Msa0699530:intron | 55.0% | |
| TTCGACTCTATGTAGGGGGG+GGG | + | chr4_4:70217490-70217509 | Msa0699530:intron | 55.0% | |
| CAGTTCAACCATCACCCCGA+AGG | - | chr4_4:70217989-70218008 | None:intergenic | 55.0% | |
| ! | CTTCGGGGTGATGGTTGAAC+TGG | + | chr4_4:70217987-70218006 | Msa0699530:intron | 55.0% |
| GTTTGAACCAACCAGCGCAC+AGG | + | chr4_4:70218094-70218113 | Msa0699530:intron | 55.0% | |
| AGGGCCATGGTATGAACCCA+TGG | + | chr4_4:70218812-70218831 | Msa0699530:intron | 55.0% | |
| GGGCCATGGTATGAACCCAT+GGG | + | chr4_4:70218813-70218832 | Msa0699530:intron | 55.0% | |
| GATCAGAAACCCCAAGTGGC+AGG | - | chr4_4:70218942-70218961 | None:intergenic | 55.0% | |
| ! | GGCATCGGATCTGACGTGAG+TGG | - | chr4_4:70213871-70213890 | None:intergenic | 60.0% |
| CCACTTCCCTGTCCTCAGTC+AGG | - | chr4_4:70215856-70215875 | None:intergenic | 60.0% | |
| CCTGACTGAGGACAGGGAAG+TGG | + | chr4_4:70215853-70215872 | Msa0699530:CDS | 60.0% | |
| !! | CAGGAGCACCATTCCCCAGA+TGG | + | chr4_4:70216953-70216972 | Msa0699530:CDS | 60.0% |
| ! | TTGCTAGTGTCTGGGGCCAC+AGG | + | chr4_4:70217030-70217049 | Msa0699530:intron | 60.0% |
| TCGACTCTATGTAGGGGGGG+GGG | + | chr4_4:70217491-70217510 | Msa0699530:intron | 60.0% | |
| CATCACCCCGAAGGTCTAGC+TGG | - | chr4_4:70217980-70217999 | None:intergenic | 60.0% | |
| CAGCTAGACCTTCGGGGTGA+TGG | + | chr4_4:70217978-70217997 | Msa0699530:intron | 60.0% | |
| AGGCTGCTTCCCGGTTCAAC+CGG | + | chr4_4:70218114-70218133 | Msa0699530:intron | 60.0% | |
| AAACCCCAAGTGGCAGGCCA+AGG | - | chr4_4:70218936-70218955 | None:intergenic | 60.0% | |
| GGACAAAGAGCAGGGAGGCA+CGG | - | chr4_4:70219439-70219458 | None:intergenic | 60.0% | |
| CGACTCTATGTAGGGGGGGG+GGG | + | chr4_4:70217492-70217511 | Msa0699530:intron | 65.0% | |
| GACTCTATGTAGGGGGGGGG+GGG | + | chr4_4:70217493-70217512 | Msa0699530:intron | 65.0% | |
| ACTCTATGTAGGGGGGGGGG+GGG | + | chr4_4:70217494-70217513 | Msa0699530:intron | 65.0% | |
| ! | GAAGCAGCCTGTGCGCTGGT+TGG | - | chr4_4:70218104-70218123 | None:intergenic | 65.0% |
| CATGGGGGGACTTGAGGCCT+TGG | + | chr4_4:70218916-70218935 | Msa0699530:intron | 65.0% | |
| TGAGGCCTTGGCCTGCCACT+TGG | + | chr4_4:70218928-70218947 | Msa0699530:intron | 65.0% | |
| ! | GAGGCCTTGGCCTGCCACTT+GGG | + | chr4_4:70218929-70218948 | Msa0699530:intron | 65.0% |
| ! | AGGCCTTGGCCTGCCACTTG+GGG | + | chr4_4:70218930-70218949 | Msa0699530:intron | 65.0% |
| !! | GTGGCGGACAAAGAGCAGGG+AGG | - | chr4_4:70219444-70219463 | None:intergenic | 65.0% |
| CTCTATGTAGGGGGGGGGGG+GGG | + | chr4_4:70217495-70217514 | Msa0699530:intron | 70.0% | |
| TCTATGTAGGGGGGGGGGGG+GGG | + | chr4_4:70217496-70217515 | Msa0699530:intron | 70.0% | |
| CCAGCGCACAGGCTGCTTCC+CGG | + | chr4_4:70218105-70218124 | Msa0699530:intron | 70.0% | |
| CTATGTAGGGGGGGGGGGGG+GGG | + | chr4_4:70217497-70217516 | Msa0699530:intron | 75.0% | |
| TATGTAGGGGGGGGGGGGGG+GGG | + | chr4_4:70217498-70217517 | Msa0699530:intron | 75.0% | |
| CCGGGAAGCAGCCTGTGCGC+TGG | - | chr4_4:70218108-70218127 | None:intergenic | 75.0% | |
| ! | ATGTAGGGGGGGGGGGGGGG+GGG | + | chr4_4:70217499-70217518 | Msa0699530:intron | 80.0% |
| ! | TGTAGGGGGGGGGGGGGGGG+GGG | + | chr4_4:70217500-70217519 | Msa0699530:intron | 85.0% |
| ! | GTAGGGGGGGGGGGGGGGGG+GGG | + | chr4_4:70217501-70217520 | Msa0699530:intron | 90.0% |
| ! | TAGGGGGGGGGGGGGGGGGG+GGG | + | chr4_4:70217502-70217521 | Msa0699530:intron | 90.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70213714 | 70219862 | 70213714 | ID=Msa0699530;Name=Msa0699530 |
| chr4_4 | mRNA | 70213714 | 70219862 | 70213714 | ID=Msa0699530-mRNA-1;Parent=Msa0699530;Name=Msa0699530-mRNA-1;_AED=0.05;_eAED=0.05;_QI=105|0.6|0.45|1|0.5|0.36|11|372|573 |
| chr4_4 | exon | 70213714 | 70213964 | 70213714 | ID=Msa0699530-mRNA-1:exon:21205;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70214142 | 70214182 | 70214142 | ID=Msa0699530-mRNA-1:exon:21206;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70215495 | 70215652 | 70215495 | ID=Msa0699530-mRNA-1:exon:21207;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70215662 | 70215895 | 70215662 | ID=Msa0699530-mRNA-1:exon:21208;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70215908 | 70216080 | 70215908 | ID=Msa0699530-mRNA-1:exon:21209;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70216199 | 70216336 | 70216199 | ID=Msa0699530-mRNA-1:exon:21210;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70216444 | 70216600 | 70216444 | ID=Msa0699530-mRNA-1:exon:21211;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70216690 | 70216861 | 70216690 | ID=Msa0699530-mRNA-1:exon:21212;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70216874 | 70217018 | 70216874 | ID=Msa0699530-mRNA-1:exon:21213;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70217037 | 70217174 | 70217037 | ID=Msa0699530-mRNA-1:exon:21214;Parent=Msa0699530-mRNA-1 |
| chr4_4 | exon | 70219271 | 70219862 | 70219271 | ID=Msa0699530-mRNA-1:exon:21215;Parent=Msa0699530-mRNA-1 |
| chr4_4 | five_prime_UTR | 70213714 | 70213818 | 70213714 | ID=Msa0699530-mRNA-1:five_prime_utr;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70213819 | 70213964 | 70213819 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70214142 | 70214182 | 70214142 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70215495 | 70215652 | 70215495 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70215662 | 70215895 | 70215662 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70215908 | 70216080 | 70215908 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70216199 | 70216336 | 70216199 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70216444 | 70216600 | 70216444 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70216690 | 70216861 | 70216690 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70216874 | 70217018 | 70216874 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70217037 | 70217174 | 70217037 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | CDS | 70219271 | 70219490 | 70219271 | ID=Msa0699530-mRNA-1:cds;Parent=Msa0699530-mRNA-1 |
| chr4_4 | three_prime_UTR | 70219491 | 70219862 | 70219491 | ID=Msa0699530-mRNA-1:three_prime_utr;Parent=Msa0699530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
