AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0501510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0501510 MtrunA17_Chr3g0099151 95.380 368 14 2 1 365 55 422 0.0 723
Msa0501510 MtrunA17_Chr3g0099161 83.424 368 56 4 1 365 61 426 0.0 622
Msa0501510 MtrunA17_Chr3g0099231 72.521 353 95 2 11 363 9 359 0.0 540
Msa0501510 MtrunA17_Chr5g0444401 66.849 365 116 3 1 364 1 361 6.68e-180 503
Msa0501510 MtrunA17_Chr1g0189901 37.097 372 218 7 1 365 1 363 3.24e-76 239
Msa0501510 MtrunA17_Chr4g0068441 35.925 373 218 9 1 362 3 365 3.27e-73 231
Msa0501510 MtrunA17_Chr7g0275021 35.519 366 216 8 11 365 10 366 9.62e-73 230
Msa0501510 MtrunA17_Chr1g0189931 37.047 359 204 7 17 365 18 364 6.03e-72 228
Msa0501510 MtrunA17_Chr3g0077571 39.266 354 200 8 16 365 15 357 3.15e-71 226
Msa0501510 MtrunA17_Chr8g0374101 37.931 377 203 13 10 365 10 376 3.65e-70 224
Msa0501510 MtrunA17_Chr2g0294301 36.885 366 214 7 6 363 10 366 4.53e-70 223
Msa0501510 MtrunA17_Chr8g0370951 36.311 347 206 7 25 362 25 365 1.59e-69 222
Msa0501510 MtrunA17_Chr4g0017431 34.770 348 213 6 24 365 24 363 3.23e-69 221
Msa0501510 MtrunA17_Chr2g0285061 36.898 374 215 10 1 365 4 365 3.35e-69 221
Msa0501510 MtrunA17_Chr8g0380041 37.067 375 202 12 8 365 6 363 1.81e-67 216
Msa0501510 MtrunA17_Chr2g0294311 35.411 353 201 9 28 363 29 371 3.66e-67 216
Msa0501510 MtrunA17_Chr3g0086641 35.616 365 214 9 13 365 15 370 5.18e-67 216
Msa0501510 MtrunA17_Chr1g0182811 35.465 344 204 9 31 365 33 367 2.83e-66 214
Msa0501510 MtrunA17_Chr5g0434621 34.718 337 200 7 20 348 14 338 3.53e-66 213
Msa0501510 MtrunA17_Chr1g0189891 36.182 351 203 8 22 365 20 356 1.97e-65 211
Msa0501510 MtrunA17_Chr3g0131321 33.422 374 231 9 1 363 1 367 2.28e-65 212
Msa0501510 MtrunA17_Chr4g0008851 35.326 368 219 8 7 365 9 366 2.40e-65 211
Msa0501510 MtrunA17_Chr4g0060811 33.438 320 199 6 33 346 29 340 3.60e-65 211
Msa0501510 MtrunA17_Chr3g0092131 33.962 318 200 5 33 346 25 336 1.42e-64 209
Msa0501510 MtrunA17_Chr7g0274991 34.795 342 207 7 31 365 33 365 1.79e-64 209
Msa0501510 MtrunA17_Chr8g0370981 31.401 414 231 6 2 364 7 418 4.72e-63 207
Msa0501510 MtrunA17_Chr7g0215961 33.514 370 214 10 3 365 8 352 5.37e-63 205
Msa0501510 MtrunA17_Chr7g0275001 33.333 369 225 7 7 365 1 358 5.44e-63 205
Msa0501510 MtrunA17_Chr7g0275011 34.694 343 206 8 31 365 34 366 3.91e-62 203
Msa0501510 MtrunA17_Chr6g0457921 34.066 364 222 11 12 365 7 362 4.22e-61 200
Msa0501510 MtrunA17_Chr2g0320671 34.884 344 209 9 10 346 8 343 3.69e-60 197
Msa0501510 MtrunA17_Chr2g0301641 35.072 345 198 8 31 362 43 374 9.10e-60 197
Msa0501510 MtrunA17_Chr3g0077581 34.000 350 213 8 25 365 30 370 3.49e-59 195
Msa0501510 MtrunA17_Chr2g0283191 35.043 351 203 10 7 338 8 352 1.27e-56 189
Msa0501510 MtrunA17_Chr4g0046151 32.964 361 210 9 11 349 16 366 1.32e-56 189
Msa0501510 MtrunA17_Chr1g0156931 34.659 352 210 8 7 346 9 352 7.00e-56 186
Msa0501510 MtrunA17_Chr3g0085881 36.705 346 189 11 26 363 28 351 2.13e-55 185
Msa0501510 MtrunA17_Chr5g0396511 32.153 339 213 7 33 363 48 377 5.36e-55 185
Msa0501510 MtrunA17_Chr1g0156911 36.335 322 186 8 30 343 36 346 1.89e-54 182
Msa0501510 MtrunA17_Chr3g0085231 33.983 359 210 12 11 363 11 348 2.89e-54 182
Msa0501510 MtrunA17_Chr8g0371491 34.925 335 194 10 19 342 24 345 8.52e-54 181
Msa0501510 MtrunA17_Chr1g0156921 32.964 361 219 10 1 346 4 356 2.44e-53 180
Msa0501510 MtrunA17_Chr8g0341001 33.531 337 208 10 18 346 18 346 2.54e-53 180
Msa0501510 MtrunA17_Chr3g0105401 32.754 345 211 11 11 346 10 342 4.67e-53 179
Msa0501510 MtrunA17_Chr5g0420811 35.152 330 187 12 25 347 27 336 6.61e-52 176
Msa0501510 MtrunA17_Chr5g0438631 33.636 330 194 10 29 346 26 342 1.38e-51 175
Msa0501510 MtrunA17_Chr5g0438621 32.335 334 208 9 13 336 8 333 2.39e-50 172
Msa0501510 MtrunA17_Chr5g0432101 34.154 325 186 10 28 338 30 340 4.19e-50 171
Msa0501510 MtrunA17_Chr1g0156901 34.472 322 192 8 30 343 49 359 1.16e-49 171
Msa0501510 MtrunA17_Chr5g0405831 34.188 351 200 12 10 342 16 353 1.27e-49 170
Msa0501510 MtrunA17_Chr2g0330781 33.631 336 205 10 21 346 18 345 1.87e-49 169
Msa0501510 MtrunA17_Chr1g0156891 35.655 359 196 10 4 340 5 350 2.98e-49 169
Msa0501510 MtrunA17_Chr5g0405821 32.931 331 204 9 27 348 39 360 6.54e-49 168
Msa0501510 MtrunA17_Chr3g0120861 31.818 330 209 9 24 346 31 351 1.23e-48 167
Msa0501510 MtrunA17_Chr8g0380031 30.831 373 212 13 11 365 62 406 2.19e-48 168
Msa0501510 MtrunA17_Chr2g0284951 31.436 369 220 12 8 363 5 353 3.49e-48 167
Msa0501510 MtrunA17_Chr8g0344931 31.034 348 212 9 27 365 33 361 1.24e-46 162
Msa0501510 MtrunA17_Chr2g0285001 30.563 373 226 12 7 363 4 359 2.04e-46 162
Msa0501510 MtrunA17_Chr8g0349341 33.333 366 214 10 11 362 13 362 9.19e-46 160
Msa0501510 MtrunA17_Chr4g0027521 31.804 327 206 9 29 346 25 343 1.24e-45 159
Msa0501510 MtrunA17_Chr8g0371481 31.420 331 202 10 30 348 40 357 3.17e-45 159
Msa0501510 MtrunA17_Chr2g0284921 31.624 351 213 12 25 365 28 361 4.65e-45 158
Msa0501510 MtrunA17_Chr5g0438641 32.298 322 204 9 26 341 27 340 7.00e-45 157
Msa0501510 MtrunA17_Chr3g0142941 33.742 326 189 11 30 343 46 356 1.69e-44 157
Msa0501510 MtrunA17_Chr3g0142921 33.645 321 187 9 30 338 35 341 2.26e-44 156
Msa0501510 MtrunA17_Chr8g0371471 30.675 326 206 9 30 346 40 354 7.91e-44 155
Msa0501510 MtrunA17_Chr2g0284991 30.481 374 224 13 7 363 4 358 8.03e-44 155
Msa0501510 MtrunA17_Chr2g0284941 31.903 373 199 16 7 363 4 337 1.39e-43 154
Msa0501510 MtrunA17_Chr8g0344941 30.699 329 205 9 31 348 41 357 8.95e-43 152
Msa0501510 MtrunA17_Chr5g0437421 29.394 330 210 8 28 344 29 348 1.34e-42 152
Msa0501510 MtrunA17_Chr8g0370961 32.627 236 155 3 131 364 11 244 1.28e-41 146
Msa0501510 MtrunA17_Chr8g0349321 30.874 366 223 10 11 362 13 362 4.01e-41 148
Msa0501510 MtrunA17_Chr8g0349301 33.333 324 183 10 6 313 1 307 5.77e-37 135
Msa0501510 MtrunA17_Chr1g0157001 31.447 318 184 10 36 338 41 339 6.94e-36 134
Msa0501510 MtrunA17_Chr8g0349331 29.945 364 197 12 11 362 13 330 4.33e-35 131
Msa0501510 MtrunA17_Chr7g0226911 29.178 353 200 11 31 349 35 371 1.82e-32 125
Msa0501510 MtrunA17_Chr1g0160011 30.548 347 198 13 30 349 39 369 8.42e-31 120
Msa0501510 MtrunA17_Chr1g0160101 28.718 390 214 17 12 359 18 385 4.90e-30 119
Msa0501510 MtrunA17_Chr7g0226941 28.212 358 207 14 30 356 32 370 1.62e-29 117
Msa0501510 MtrunA17_Chr6g0459921 31.429 245 152 9 131 365 123 361 2.02e-29 116
Msa0501510 MtrunA17_Chr1g0160031 29.745 353 193 12 30 349 38 368 2.74e-29 116
Msa0501510 MtrunA17_Chr1g0159991 29.444 360 199 13 30 356 35 372 2.81e-29 116
Msa0501510 MtrunA17_Chr6g0455661 31.276 243 151 9 133 365 236 472 3.09e-29 117
Msa0501510 MtrunA17_Chr6g0455661 44.681 141 61 5 5 141 1 128 3.97e-23 100
Msa0501510 MtrunA17_Chr7g0226931 26.923 364 205 11 31 349 38 385 4.06e-29 116
Msa0501510 MtrunA17_Chr6g0450701 31.054 351 188 14 30 349 38 365 1.05e-28 114
Msa0501510 MtrunA17_Chr1g0178931 27.052 329 204 12 29 346 35 338 1.87e-27 110
Msa0501510 MtrunA17_Chr1g0189921 45.455 132 60 4 5 136 11 130 3.88e-27 105
Msa0501510 MtrunA17_Chr6g0450721 27.019 359 213 13 15 349 13 346 1.28e-26 108
Msa0501510 MtrunA17_Chr7g0275291 25.141 354 218 12 31 356 33 367 1.35e-26 108
Msa0501510 MtrunA17_Chr8g0370971 44.595 148 67 6 15 150 16 160 1.53e-26 103
Msa0501510 MtrunA17_Chr1g0159981 27.624 362 203 13 30 356 45 382 1.66e-26 108
Msa0501510 MtrunA17_Chr3g0112821 30.871 379 216 17 1 355 1 357 4.89e-26 107
Msa0501510 MtrunA17_Chr3g0104821 28.736 348 203 14 31 350 44 374 9.68e-26 106
Msa0501510 MtrunA17_Chr2g0283511 28.736 348 204 17 36 356 36 366 3.84e-25 105
Msa0501510 MtrunA17_Chr6g0450711 27.841 352 198 13 30 349 121 448 4.87e-25 105
Msa0501510 MtrunA17_Chr6g0450731 26.741 359 216 14 15 349 13 348 7.02e-25 103
Msa0501510 MtrunA17_Chr2g0283481 28.696 345 206 14 31 350 47 376 9.57e-25 103
Msa0501510 MtrunA17_Chr8g0352901 28.775 351 201 12 30 349 27 359 9.83e-25 103
Msa0501510 MtrunA17_Chr3g0093031 29.443 377 215 16 12 355 4 362 1.15e-24 103
Msa0501510 MtrunA17_Chr7g0229591 38.503 187 99 7 29 213 28 200 1.18e-24 100
Msa0501510 MtrunA17_Chr7g0254461 27.100 369 209 16 30 359 42 389 1.42e-24 103
Msa0501510 MtrunA17_Chr8g0347751 27.809 356 198 14 31 349 36 369 2.97e-24 102
Msa0501510 MtrunA17_Chr7g0266061 25.836 329 203 15 32 346 43 344 4.61e-24 101
Msa0501510 MtrunA17_Chr4g0027571 29.245 212 144 4 140 346 3 213 1.02e-23 97.8
Msa0501510 MtrunA17_Chr4g0057991 28.421 380 226 14 3 356 8 367 1.19e-23 100
Msa0501510 MtrunA17_Chr2g0317271 28.883 367 212 17 10 350 2 345 2.51e-23 99.8
Msa0501510 MtrunA17_Chr2g0301581 28.763 372 212 14 1 350 7 347 3.97e-23 99.0
Msa0501510 MtrunA17_Chr1g0198351 26.685 356 209 16 3 336 8 333 5.01e-23 98.6
Msa0501510 MtrunA17_Chr1g0189911 33.333 150 90 4 222 365 1 146 1.61e-22 92.4
Msa0501510 MtrunA17_Chr1g0191461 26.901 342 197 13 30 338 30 351 2.11e-22 97.1
Msa0501510 MtrunA17_Chr2g0301541 28.877 374 209 15 1 350 7 347 2.38e-22 96.7
Msa0501510 MtrunA17_Chr1g0178941 26.888 331 204 14 32 346 41 349 4.05e-22 96.3
Msa0501510 MtrunA17_Chr1g0198381 26.524 328 201 14 32 346 3 303 7.05e-22 94.7
Msa0501510 MtrunA17_Chr7g0271551 25.070 359 208 14 26 356 31 356 7.48e-22 95.5
Msa0501510 MtrunA17_Chr2g0321991 54.000 100 41 3 25 124 27 121 9.96e-22 89.7
Msa0501510 MtrunA17_Chr2g0283531 28.947 380 220 19 1 350 1 360 2.51e-21 94.0
Msa0501510 MtrunA17_Chr2g0283501 29.539 369 215 19 16 356 14 365 6.53e-21 92.8
Msa0501510 MtrunA17_Chr8g0381581 25.568 352 214 13 30 349 39 374 7.06e-21 93.2
Msa0501510 MtrunA17_Chr6g0469511 45.455 121 58 5 30 149 29 142 1.29e-20 87.0
Msa0501510 MtrunA17_Chr7g0273101 25.210 357 219 12 30 356 28 366 1.84e-20 91.7
Msa0501510 MtrunA17_Chr5g0440501 26.971 241 162 6 136 363 10 249 4.09e-20 88.6
Msa0501510 MtrunA17_Chr4g0027561 51.515 99 41 4 30 127 29 121 5.45e-19 82.8
Msa0501510 MtrunA17_Chr7g0229581 32.143 140 90 3 211 346 8 146 5.25e-18 80.5
Msa0501510 MtrunA17_Chr7g0228261 40.244 82 49 0 284 365 11 92 8.41e-18 77.8
Msa0501510 MtrunA17_Chr8g0339251 29.333 300 171 12 30 313 27 301 1.89e-17 82.4
Msa0501510 MtrunA17_Chr1g0198391 25.287 348 203 14 20 336 22 343 7.13e-17 80.9
Msa0501510 MtrunA17_Chr3g0112691 27.926 376 220 17 12 355 4 360 6.57e-15 75.1
Msa0501510 MtrunA17_Chr3g0096551 26.649 379 222 16 12 349 4 367 3.82e-14 73.2
Msa0501510 MtrunA17_Chr3g0104831 27.068 266 156 12 113 350 38 293 6.13e-14 71.6
Msa0501510 MtrunA17_Chr2g0301571 26.280 293 174 10 78 350 33 303 1.88e-13 70.5
Msa0501510 MtrunA17_Chr2g0301551 26.621 293 173 10 78 350 33 303 3.00e-13 69.7
Msa0501510 MtrunA17_Chr4g0018561 47.826 69 32 2 16 81 12 79 1.61e-12 63.2
Msa0501510 MtrunA17_Chr4g0018571 27.397 146 95 4 208 346 28 169 1.81e-12 65.5
Msa0501510 MtrunA17_Chr2g0308201 44.706 85 45 2 1 85 5 87 9.35e-12 60.8
Msa0501510 MtrunA17_Chr1g0198401 26.778 239 146 8 112 336 29 252 1.44e-11 64.3
Msa0501510 MtrunA17_Chr2g0308211 33.582 134 79 7 83 212 20 147 5.42e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0501510 AT5G55050.1 52.507 339 156 4 30 364 38 375 1.03e-114 338
Msa0501510 AT5G37690.1 37.461 323 182 7 33 347 29 339 6.65e-72 228
Msa0501510 AT3G50400.1 38.873 355 195 12 25 365 28 374 1.89e-70 225
Msa0501510 AT5G08460.1 34.349 361 219 6 17 365 31 385 2.90e-69 222
Msa0501510 AT1G29660.1 37.363 364 202 11 15 365 14 364 1.05e-68 220
Msa0501510 AT5G37690.2 36.842 323 176 8 33 347 29 331 1.07e-66 214
Msa0501510 AT5G18430.1 35.027 374 222 9 1 365 1 362 2.27e-65 211
Msa0501510 AT2G23540.1 37.283 346 194 10 31 362 48 384 1.97e-64 210
Msa0501510 AT4G28780.1 34.278 353 213 9 23 365 20 363 2.74e-64 209
Msa0501510 AT3G04290.1 34.341 364 218 8 11 365 10 361 5.76e-64 208
Msa0501510 AT1G29670.1 35.890 365 206 11 16 365 12 363 1.21e-63 207
Msa0501510 AT1G29670.2 35.890 365 206 11 16 365 80 431 7.84e-63 207
Msa0501510 AT5G33370.1 34.503 342 208 7 31 365 30 362 3.22e-62 203
Msa0501510 AT1G74460.1 34.615 338 207 6 15 346 7 336 3.13e-61 201
Msa0501510 AT5G45670.1 34.933 375 215 11 7 365 1 362 5.18e-61 200
Msa0501510 AT1G33811.1 33.687 377 216 11 13 365 4 370 5.81e-61 200
Msa0501510 AT1G71250.1 33.721 344 214 6 28 365 38 373 2.94e-60 199
Msa0501510 AT4G18970.1 35.613 351 197 11 29 365 26 361 1.42e-59 196
Msa0501510 AT4G18970.2 35.613 351 197 11 29 365 26 361 9.91e-59 196
Msa0501510 AT1G71691.2 33.724 341 212 7 29 365 53 383 5.32e-58 193
Msa0501510 AT4G10950.2 32.362 343 215 7 29 363 69 402 6.36e-58 193
Msa0501510 AT5G22810.1 36.127 346 201 11 12 346 14 350 1.38e-56 189
Msa0501510 AT5G45960.1 35.443 316 186 9 31 336 47 354 5.64e-56 187
Msa0501510 AT3G53100.1 36.111 324 193 9 29 346 27 342 8.66e-56 186
Msa0501510 AT5G15720.1 34.483 348 204 10 30 365 29 364 4.38e-55 185
Msa0501510 AT4G10950.1 32.070 343 212 8 29 363 69 398 2.87e-54 184
Msa0501510 AT1G20132.1 34.503 342 199 11 27 358 57 383 3.01e-54 183
Msa0501510 AT1G20120.1 35.474 327 189 10 30 346 77 391 3.96e-54 183
Msa0501510 AT1G75890.2 34.535 333 193 9 27 347 43 362 6.02e-54 182
Msa0501510 AT5G42170.1 35.714 322 192 9 30 346 49 360 1.20e-53 181
Msa0501510 AT1G75890.3 34.535 333 193 9 27 347 72 391 1.43e-53 182
Msa0501510 AT5G03820.1 33.146 356 217 10 1 346 4 348 1.48e-52 178
Msa0501510 AT5G41890.1 33.060 366 217 10 16 362 16 372 1.61e-52 178
Msa0501510 AT5G03820.2 33.146 356 217 10 1 346 32 376 3.22e-52 178
Msa0501510 AT5G03810.1 32.295 353 221 9 1 346 3 344 3.30e-52 177
Msa0501510 AT1G06990.1 33.228 316 196 7 30 338 36 343 5.28e-52 177
Msa0501510 AT2G40250.1 33.951 324 190 9 31 341 36 348 8.10e-52 176
Msa0501510 AT1G75890.1 33.333 345 194 9 27 347 43 375 9.23e-52 177
Msa0501510 AT3G14820.1 33.787 367 210 15 1 353 1 348 9.96e-52 176
Msa0501510 AT5G40990.1 33.067 375 218 11 12 365 11 373 5.37e-51 174
Msa0501510 AT3G16370.1 34.756 328 199 9 26 346 25 344 1.25e-50 173
Msa0501510 AT1G71120.1 32.565 347 211 10 25 363 25 356 5.60e-50 171
Msa0501510 AT1G75880.2 34.650 329 193 9 30 348 51 367 7.86e-50 171
Msa0501510 AT1G53920.1 33.048 351 205 10 31 365 48 384 1.04e-49 171
Msa0501510 AT2G03980.2 34.675 323 189 9 30 343 42 351 1.82e-49 170
Msa0501510 AT2G03980.3 34.675 323 189 9 30 343 42 351 1.82e-49 170
Msa0501510 AT2G03980.1 34.675 323 189 9 30 343 42 351 1.82e-49 170
Msa0501510 AT2G03980.4 34.675 323 189 9 30 343 42 351 1.82e-49 170
Msa0501510 AT2G42990.1 32.743 339 210 9 17 347 14 342 2.39e-49 169
Msa0501510 AT1G75880.1 34.043 329 196 8 30 348 51 368 2.88e-49 170
Msa0501510 AT2G30310.1 32.602 319 195 8 30 338 33 341 3.17e-49 169
Msa0501510 AT1G75900.1 33.025 324 204 7 30 348 42 357 6.06e-49 169
Msa0501510 AT1G20130.1 34.743 331 191 11 25 340 198 518 1.14e-48 172
Msa0501510 AT1G20130.2 34.743 331 191 11 25 340 178 498 1.80e-48 171
Msa0501510 AT1G75920.2 34.615 338 193 11 18 346 16 334 2.34e-48 167
Msa0501510 AT1G58430.1 32.471 348 201 11 13 338 7 342 3.96e-48 167
Msa0501510 AT2G04570.1 31.897 348 215 10 11 348 8 343 3.32e-47 164
Msa0501510 AT4G30140.1 33.043 345 201 12 25 363 27 347 9.77e-47 162
Msa0501510 AT2G30220.1 32.609 322 195 8 30 340 32 342 1.11e-46 162
Msa0501510 AT1G20135.1 32.219 329 199 10 17 340 15 324 4.11e-46 160
Msa0501510 AT2G19060.1 32.378 349 204 12 24 363 23 348 4.61e-46 161
Msa0501510 AT2G24560.1 32.710 321 192 9 30 338 33 341 5.87e-46 161
Msa0501510 AT1G59406.1 33.533 334 202 9 30 357 29 348 7.10e-46 160
Msa0501510 AT1G59030.1 33.533 334 202 9 30 357 29 348 7.10e-46 160
Msa0501510 AT1G58725.1 33.533 334 202 9 30 357 29 348 7.10e-46 160
Msa0501510 AT1G53990.1 30.446 381 226 11 7 365 1 364 8.63e-46 160
Msa0501510 AT4G26790.1 31.515 330 202 11 28 346 26 342 3.25e-45 159
Msa0501510 AT4G26790.2 31.515 330 202 11 28 346 26 342 3.25e-45 159
Msa0501510 AT2G31540.1 32.537 335 199 10 30 349 34 356 1.09e-44 157
Msa0501510 AT3G43570.1 32.424 330 182 9 30 357 29 319 2.09e-44 155
Msa0501510 AT1G75920.1 32.857 350 198 11 18 346 11 344 2.14e-44 157
Msa0501510 AT5G45950.1 31.661 319 202 8 31 345 40 346 5.09e-44 155
Msa0501510 AT1G58520.3 33.234 334 196 10 30 357 29 341 6.99e-44 155
Msa0501510 AT1G58525.1 33.234 334 196 10 30 357 29 341 6.99e-44 155
Msa0501510 AT3G14225.1 30.286 350 220 9 31 365 37 377 9.17e-44 155
Msa0501510 AT3G14225.2 30.460 348 218 9 31 365 37 373 1.15e-43 155
Msa0501510 AT2G19010.1 31.014 345 212 11 11 349 10 334 3.45e-43 153
Msa0501510 AT1G75910.1 32.317 328 191 11 30 346 27 334 4.26e-43 153
Msa0501510 AT2G19010.2 31.014 345 212 11 11 349 40 364 6.74e-43 153
Msa0501510 AT4G16230.1 37.815 238 132 7 17 246 16 245 1.62e-42 149
Msa0501510 AT1G75930.1 31.195 343 204 11 11 341 7 329 6.63e-42 150
Msa0501510 AT5G63170.1 31.804 327 195 10 19 338 16 321 1.97e-41 148
Msa0501510 AT1G71691.1 30.035 283 193 4 87 365 1 282 4.90e-41 146
Msa0501510 AT2G19050.1 31.143 350 205 13 26 365 26 349 2.04e-40 146
Msa0501510 AT1G53940.2 32.184 348 212 11 31 365 39 375 4.03e-40 146
Msa0501510 AT1G75920.3 31.454 337 174 10 18 346 16 303 1.21e-39 143
Msa0501510 AT1G54030.1 28.274 336 214 8 32 365 53 363 1.14e-38 143
Msa0501510 AT1G73610.1 32.743 339 184 14 16 336 13 325 1.30e-38 141
Msa0501510 AT5G15720.3 30.872 298 179 9 83 365 48 333 7.08e-38 139
Msa0501510 AT1G75920.4 33.446 296 170 10 60 346 29 306 3.74e-37 136
Msa0501510 AT1G71691.3 33.457 269 165 7 29 293 53 311 9.61e-37 135
Msa0501510 AT2G04020.2 32.698 315 154 9 30 338 42 304 1.89e-36 135
Msa0501510 AT5G33370.2 34.177 237 145 5 31 262 30 260 2.82e-36 134
Msa0501510 AT5G15720.2 35.484 279 150 11 30 293 29 292 2.62e-35 131
Msa0501510 AT1G54000.1 27.920 351 220 9 24 363 27 355 1.10e-34 131
Msa0501510 AT2G04020.1 39.216 204 112 4 30 231 42 235 1.54e-34 128
Msa0501510 AT1G54010.1 27.957 372 237 9 2 363 5 355 1.81e-34 131
Msa0501510 AT1G54020.2 26.757 370 241 9 1 363 1 347 2.95e-34 130
Msa0501510 AT2G19050.2 33.080 263 152 9 26 281 26 271 2.83e-31 120
Msa0501510 AT1G23500.1 29.107 347 214 11 15 352 19 342 5.80e-31 120
Msa0501510 AT3G43550.1 33.086 269 164 7 30 293 29 286 5.91e-31 119
Msa0501510 AT3G27950.1 28.883 367 207 14 17 349 11 357 8.14e-31 120
Msa0501510 AT5G14450.1 28.531 354 199 14 30 349 40 373 6.88e-30 118
Msa0501510 AT1G56670.1 28.610 374 205 15 4 341 3 350 1.45e-29 117
Msa0501510 AT2G24560.2 31.071 280 169 9 30 297 33 300 2.53e-29 115
Msa0501510 AT1G54790.3 26.667 390 234 14 7 362 4 375 3.85e-28 114
Msa0501510 AT1G54030.2 28.517 263 163 6 32 292 53 292 4.40e-28 112
Msa0501510 AT1G28610.2 30.649 385 212 18 4 356 3 364 1.64e-27 112
Msa0501510 AT2G27360.1 29.111 371 222 15 7 350 8 364 6.70e-27 110
Msa0501510 AT3G14220.1 25.762 361 237 11 13 364 14 352 1.06e-26 109
Msa0501510 AT3G48460.1 28.000 350 207 15 32 356 39 368 4.51e-26 107
Msa0501510 AT3G14210.1 26.879 346 216 12 31 363 36 357 5.83e-26 107
Msa0501510 AT3G62280.1 28.329 353 211 13 25 358 30 359 2.84e-25 105
Msa0501510 AT1G67830.1 28.291 357 204 16 30 352 29 367 3.02e-25 105
Msa0501510 AT1G28660.1 28.496 379 225 15 7 356 8 369 1.38e-24 103
Msa0501510 AT1G28660.2 28.647 377 226 14 7 356 8 368 4.18e-24 102
Msa0501510 AT1G28650.1 27.933 358 215 14 25 356 31 371 6.33e-24 102
Msa0501510 AT1G28640.1 29.091 385 215 20 7 356 8 369 7.38e-24 102
Msa0501510 AT1G53940.1 31.985 272 167 10 31 295 39 299 8.86e-24 100
Msa0501510 AT1G09390.1 27.761 335 204 12 26 341 32 347 1.32e-23 100
Msa0501510 AT2G31550.1 30.890 191 121 5 164 346 22 209 1.60e-23 97.4
Msa0501510 AT5G03610.1 27.726 321 198 15 32 340 44 342 3.30e-23 99.8
Msa0501510 AT1G54020.1 26.667 255 170 6 113 363 20 261 3.61e-23 98.2
Msa0501510 AT1G54020.5 26.667 255 170 6 113 363 20 261 3.61e-23 98.2
Msa0501510 AT1G54020.3 26.667 255 170 6 113 363 20 261 3.61e-23 98.2
Msa0501510 AT1G28670.1 28.385 384 220 18 7 356 8 370 4.21e-23 99.8
Msa0501510 AT1G28580.1 27.596 366 223 15 12 350 17 367 8.45e-23 99.0
Msa0501510 AT1G54790.1 25.620 363 222 13 30 362 30 374 2.47e-22 97.4
Msa0501510 AT3G05180.1 26.870 361 217 13 30 359 35 379 2.54e-22 97.4
Msa0501510 AT1G28570.1 29.023 348 202 15 31 350 34 364 4.65e-22 96.7
Msa0501510 AT4G16233.1 39.370 127 75 2 240 365 5 130 4.88e-22 90.9
Msa0501510 AT1G28600.1 28.286 350 211 15 31 356 31 364 1.78e-21 95.1
Msa0501510 AT1G54020.4 26.829 205 145 3 163 363 9 212 1.81e-21 92.4
Msa0501510 AT4G01130.1 24.927 341 205 10 31 338 34 356 2.57e-21 94.7
Msa0501510 AT1G56670.2 27.414 321 176 13 4 293 3 297 7.62e-21 92.0
Msa0501510 AT1G28590.1 28.736 348 203 15 31 350 36 366 1.32e-20 92.8
Msa0501510 AT1G31550.2 27.441 379 229 18 1 350 4 365 2.02e-20 92.0
Msa0501510 AT3G14210.2 28.571 210 140 6 163 363 21 229 6.79e-19 85.9
Msa0501510 AT5G03600.2 26.286 350 208 15 10 340 22 340 9.03e-19 87.0
Msa0501510 AT5G03600.1 26.284 331 200 15 23 340 6 305 1.14e-18 86.3
Msa0501510 AT1G31550.1 26.893 383 223 19 1 350 4 362 5.81e-18 84.7
Msa0501510 AT1G54790.2 24.165 389 221 15 30 362 30 400 1.25e-17 84.0
Msa0501510 AT4G16220.1 43.689 103 49 4 24 125 23 117 9.50e-15 73.6
Msa0501510 AT2G36325.1 27.907 344 185 19 22 340 39 344 1.14e-14 74.7
Msa0501510 AT4G01130.3 23.664 262 161 7 110 338 15 270 1.20e-14 74.3
Msa0501510 AT5G03590.2 32.500 160 85 8 25 181 29 168 3.83e-12 65.1
Msa0501510 AT1G28580.2 25.086 291 180 12 84 350 10 286 7.24e-12 66.2

Find 75 sgRNAs with CRISPR-Local

Find 280 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACTCCAGCTATTTATGTATT+TGG 0.105963 3_4:-42792501 Msa0501510:CDS
AACTATGGAAATATCCATTT+TGG 0.162466 3_4:+42792590 None:intergenic
TCCAATCACAACAGCAAATA+TGG 0.234293 3_4:+42790756 None:intergenic
TTGTCAATTAAATATAATAA+AGG 0.246975 3_4:-42789819 Msa0501510:CDS
ATATTTAATTGACAATAAAT+TGG 0.255835 3_4:+42789827 None:intergenic
ACTAGTTGTTCCATATTAAT+AGG 0.257116 3_4:+42787929 None:intergenic
ATACACATCTCCTATTAATA+TGG 0.267773 3_4:-42787939 Msa0501510:CDS
TTGTTCTTGAGCCTGCTTAT+TGG 0.276527 3_4:+42789870 None:intergenic
TGTTCTTGAGCCTGCTTATT+GGG 0.281967 3_4:+42789871 None:intergenic
ATTGGAAGCAATGATATATT+TGG 0.284679 3_4:-42790739 Msa0501510:CDS
GAAATTCCTTATCATAACTA+TGG 0.328037 3_4:+42792575 None:intergenic
CTCCCAGTTGGTTTCTTAGT+TGG 0.330907 3_4:+42792393 None:intergenic
GTGGAGGTTGTGATGGCTTT+GGG 0.346523 3_4:+42792635 None:intergenic
AAGGCAATTCTTCCTTACTA+TGG 0.347610 3_4:-42792426 Msa0501510:CDS
TTCAATTGTTAACAAATAAC+CGG 0.350127 3_4:+42787853 None:intergenic
CATGGTGTTAACTTTGCATC+TGG 0.361603 3_4:-42791421 Msa0501510:CDS
TGTCAATTAAATATAATAAA+GGG 0.365897 3_4:-42789818 Msa0501510:CDS
ATTGTTGGTGTTGGTCCAAT+TGG 0.381303 3_4:-42789900 Msa0501510:CDS
TGTGGAGGTTGTGATGGCTT+TGG 0.384757 3_4:+42792634 None:intergenic
TTTGTTGATAGACTTTATAA+TGG 0.392522 3_4:-42787971 Msa0501510:CDS
TCCATATTTGCTGTTGTGAT+TGG 0.392832 3_4:-42790757 Msa0501510:CDS
CTTGACTCTTTCTCTTGTAA+AGG 0.417918 3_4:-42792445 Msa0501510:CDS
AACTTTGCATCTGGAGGTGC+TGG 0.420986 3_4:-42791412 Msa0501510:CDS
AATTCTGAATGATGTCTTGT+AGG 0.421416 3_4:+42789718 None:intergenic
CTTATTGGGCAGCATCCAAT+TGG 0.428003 3_4:+42789885 None:intergenic
GAATTTGATCTTAGATACTA+AGG 0.434238 3_4:+42791465 None:intergenic
AACACAATTGTAGCGCAATC+TGG 0.436536 3_4:-42787747 Msa0501510:three_prime_UTR
AAAGATGCTTGTTGTGGACT+TGG 0.443661 3_4:-42788103 Msa0501510:CDS
TTTCCAACTAAGAAACCAAC+TGG 0.449783 3_4:-42792396 Msa0501510:CDS
ATTCAGAATTCAATTTCTTA+CGG 0.453903 3_4:-42789705 Msa0501510:intron
GCAAGGAAATTTGAGATTGT+TGG 0.456704 3_4:-42789915 Msa0501510:CDS
TTGTAGCGCAATCTGGTAGA+AGG 0.458799 3_4:-42787740 Msa0501510:intron
CAATTTCCATTCTTTCAACA+TGG 0.458884 3_4:+42789788 None:intergenic
TTCTTCATCTTTATAAGCTT+AGG 0.464361 3_4:-42792543 Msa0501510:CDS
TTCAATCCATGTTGAAAGAA+TGG 0.464395 3_4:-42789794 Msa0501510:CDS
TTGGCACAAAGTCTTGAAAC+TGG 0.467886 3_4:+42788052 None:intergenic
ATATTTCCATAGTTATGATA+AGG 0.479736 3_4:-42792581 Msa0501510:CDS
ATATGTTTAGTTCTAGTTGA+GGG 0.486563 3_4:-42787611 Msa0501510:three_prime_UTR
GGAAAGTCAATGCCATAGTA+AGG 0.495108 3_4:+42792414 None:intergenic
TTAGTTTATGCAGTTGTTCG+AGG 0.501654 3_4:-42787814 Msa0501510:three_prime_UTR
TCTCCAAATACATAAATAGC+TGG 0.502551 3_4:+42792498 None:intergenic
TTGGATGCTGCCCAATAAGC+AGG 0.504039 3_4:-42789881 Msa0501510:CDS
GCTGCCTCAGTAGGATGGAC+TGG 0.510638 3_4:+42788004 None:intergenic
ATTTGGTTACTATAACTCAA+TGG 0.512877 3_4:-42790722 Msa0501510:CDS
TGTGTGTGTGGAGGTTGTGA+TGG 0.523508 3_4:+42792628 None:intergenic
AAACACCCCACAACAATATG+TGG 0.527276 3_4:-42790686 Msa0501510:CDS
CCATTGCTAAACCTCCCAGT+TGG 0.530428 3_4:+42792381 None:intergenic
GGTAAGGTGGTGACGTGGCA+AGG 0.533117 3_4:+42791491 None:intergenic
TGGAATCCACATATTGTTGT+GGG 0.533182 3_4:+42790680 None:intergenic
GGAGACTCACTTGTTGATGT+TGG 0.541601 3_4:-42792480 Msa0501510:CDS
GATATGTTTAGTTCTAGTTG+AGG 0.543368 3_4:-42787612 Msa0501510:three_prime_UTR
ATACGCATGGCTGCCTCAGT+AGG 0.545791 3_4:+42787995 None:intergenic
AATATCTTTGACAAAGCAAG+TGG 0.550682 3_4:-42790854 Msa0501510:CDS
ATGGAATCCACATATTGTTG+TGG 0.560825 3_4:+42790679 None:intergenic
AAATTTGAGATTGTTGGTGT+TGG 0.567264 3_4:-42789909 Msa0501510:CDS
TATGTTTAGTTCTAGTTGAG+GGG 0.572112 3_4:-42787610 Msa0501510:three_prime_UTR
ATTCTGAATGATGTCTTGTA+GGG 0.572631 3_4:+42789719 None:intergenic
TTAGATACTAAGGAGAGGTA+AGG 0.573518 3_4:+42791475 None:intergenic
GCATGGCTGCCTCAGTAGGA+TGG 0.576802 3_4:+42787999 None:intergenic
AGAATGGAAATTGCAGAACA+AGG 0.576957 3_4:-42789778 Msa0501510:CDS
GGTGTTAACTTTGCATCTGG+AGG 0.589960 3_4:-42791418 Msa0501510:CDS
ACAACTAGTAGCTCTTTGAA+TGG 0.590397 3_4:-42787915 Msa0501510:exon
GACTATATAACAATGGTGCA+AGG 0.608673 3_4:-42789932 Msa0501510:CDS
AAGAATATATCATTCTTGCA+TGG 0.614230 3_4:-42791439 Msa0501510:CDS
TGGCAGAGACTATATAACAA+TGG 0.619822 3_4:-42789939 Msa0501510:intron
GATACTAAGGAGAGGTAAGG+TGG 0.626001 3_4:+42791478 None:intergenic
TCTATCAACAAAGATACGCA+TGG 0.635800 3_4:+42787982 None:intergenic
GGAGAGGTAAGGTGGTGACG+TGG 0.671631 3_4:+42791486 None:intergenic
CAACTAAGAAACCAACTGGG+AGG 0.671928 3_4:-42792392 Msa0501510:CDS
TGATCTTAGATACTAAGGAG+AGG 0.675757 3_4:+42791470 None:intergenic
CCAACTGGGAGGTTTAGCAA+TGG 0.692546 3_4:-42792381 Msa0501510:CDS
GATGTGAAAGATGCTTGTTG+TGG 0.694359 3_4:-42788109 Msa0501510:CDS
TTCCAACTAAGAAACCAACT+GGG 0.701712 3_4:-42792395 Msa0501510:CDS
GGAATCCACATATTGTTGTG+GGG 0.712103 3_4:+42790681 None:intergenic
GGATCCAGTCCATCCTACTG+AGG 0.712223 3_4:-42788008 Msa0501510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATATATATTTTTTAT+TGG - chr3_4:42788581-42788600 Msa0501510:intron 0.0%
!! ATATTTATGAATGAAAAAAT+TGG + chr3_4:42787642-42787661 None:intergenic 10.0%
!!! ATTTTATAATACGTATAAAA+TGG - chr3_4:42790084-42790103 Msa0501510:intron 10.0%
!! ATATTTAATTGACAATAAAT+TGG + chr3_4:42790476-42790495 None:intergenic 10.0%
!! TTGTCAATTAAATATAATAA+AGG - chr3_4:42790481-42790500 Msa0501510:intron 10.0%
!! TGTCAATTAAATATAATAAA+GGG - chr3_4:42790482-42790501 Msa0501510:intron 10.0%
!!! ACTTATTTTATTTTTCTTTT+GGG - chr3_4:42791965-42791984 Msa0501510:intron 10.0%
!!! TTGAATTTTTATTTTTTTTC+CGG - chr3_4:42792428-42792447 Msa0501510:CDS 10.0%
!!! TTTTATCTTTCTTTTTACAA+AGG + chr3_4:42788507-42788526 None:intergenic 15.0%
!! TTCAAAACGATATATAATTT+GGG + chr3_4:42789723-42789742 None:intergenic 15.0%
!!! CAAAATTGTTTCTTATAATA+AGG - chr3_4:42789951-42789970 Msa0501510:intron 15.0%
!! ATTTCACTATATAGAATTAT+AGG + chr3_4:42790150-42790169 None:intergenic 15.0%
!! ATAATTTCATAAATGAGTAT+TGG - chr3_4:42790277-42790296 Msa0501510:intron 15.0%
!!! TTAAAATAATAATTTTGGGT+TGG - chr3_4:42790329-42790348 Msa0501510:intron 15.0%
!! AGTAAGATTTACTAAAAATA+GGG + chr3_4:42790870-42790889 None:intergenic 15.0%
!! TAGTAAGATTTACTAAAAAT+AGG + chr3_4:42790871-42790890 None:intergenic 15.0%
!!! ATTTTAAGTTTTGATTGATA+TGG + chr3_4:42791319-42791338 None:intergenic 15.0%
!!! TTTTCTTTTCATATTATAGT+TGG + chr3_4:42791347-42791366 None:intergenic 15.0%
!!! TTAACTATAACATGTTTTAA+TGG - chr3_4:42791532-42791551 Msa0501510:intron 15.0%
!!! CACTTATTTTATTTTTCTTT+TGG - chr3_4:42791964-42791983 Msa0501510:intron 15.0%
!! ATATGAAGTAAAATGTTTAT+TGG - chr3_4:42792105-42792124 Msa0501510:intron 15.0%
!! AGAAAAAACAAATTCCAAAA+TGG - chr3_4:42787696-42787715 Msa0501510:three_prime_UTR 20.0%
!! ATATTTCCATAGTTATGATA+AGG - chr3_4:42787719-42787738 Msa0501510:intron 20.0%
!!! GTGTTTGTTGTTATTATTAT+TGG - chr3_4:42788005-42788024 Msa0501510:CDS 20.0%
!!! CTTTTATAAATTTGATGCTT+GGG + chr3_4:42788437-42788456 None:intergenic 20.0%
!!! ACTTTTATAAATTTGATGCT+TGG + chr3_4:42788438-42788457 None:intergenic 20.0%
!!! AAAAAAACTTAAAAGCATGT+TGG - chr3_4:42788524-42788543 Msa0501510:intron 20.0%
!!! AAGACAAAAGCATTAAATTT+TGG + chr3_4:42788645-42788664 None:intergenic 20.0%
!!! GCATATTGATTATTGATATT+TGG - chr3_4:42788686-42788705 Msa0501510:intron 20.0%
!! ACATGTTAAAAAATTTAGCA+TGG - chr3_4:42789092-42789111 Msa0501510:intron 20.0%
!! CCGAAAATGTATATAATTTA+GGG + chr3_4:42789221-42789240 None:intergenic 20.0%
!!! CCCTAAATTATATACATTTT+CGG - chr3_4:42789218-42789237 Msa0501510:intron 20.0%
!! ACCGAAAATGTATATAATTT+AGG + chr3_4:42789222-42789241 None:intergenic 20.0%
!!! ATATACATTTTCGGTAAAAT+AGG - chr3_4:42789227-42789246 Msa0501510:intron 20.0%
!! CTTCAAAACGATATATAATT+TGG + chr3_4:42789724-42789743 None:intergenic 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG + chr3_4:42789843-42789862 None:intergenic 20.0%
!!! AGAAACAATTTTGACTTTTT+AGG + chr3_4:42789944-42789963 None:intergenic 20.0%
!! AAATATATCAAATGCATACA+AGG - chr3_4:42790166-42790185 Msa0501510:intron 20.0%
!! AATATATCAAATGCATACAA+GGG - chr3_4:42790167-42790186 Msa0501510:intron 20.0%
!!! TTTTGCATGCATTTTAATAT+TGG - chr3_4:42790205-42790224 Msa0501510:intron 20.0%
!! ATTCAGAATTCAATTTCTTA+CGG - chr3_4:42790595-42790614 Msa0501510:intron 20.0%
!!! TTTGAAGTAAAATGAGATAT+AGG + chr3_4:42790642-42790661 None:intergenic 20.0%
!!! ATATCTCATTTTACTTCAAA+TGG - chr3_4:42790642-42790661 Msa0501510:intron 20.0%
!! ATATGTATATCAAGAGTTAT+AGG - chr3_4:42790755-42790774 Msa0501510:CDS 20.0%
!! TATGTTCAAGCAAAATTTAA+TGG - chr3_4:42790808-42790827 Msa0501510:CDS 20.0%
!! TTCATATTATGTTACAATCT+TGG + chr3_4:42791142-42791161 None:intergenic 20.0%
!! ACTATAATTAGCTAGTTAAT+CGG - chr3_4:42791173-42791192 Msa0501510:intron 20.0%
!! ACTTATAAAATTAAAGTGAG+TGG - chr3_4:42791574-42791593 Msa0501510:intron 20.0%
!!! AGATGATAACTTATTTTGTT+TGG - chr3_4:42791765-42791784 Msa0501510:intron 20.0%
!!! TTTGTTGATAGACTTTATAA+TGG - chr3_4:42792329-42792348 Msa0501510:intron 20.0%
!! TTCAATTGTTAACAAATAAC+CGG + chr3_4:42792450-42792469 None:intergenic 20.0%
!!! TTTTCTTCTGTTTCAATTTT+TGG + chr3_4:42792534-42792553 None:intergenic 20.0%
!! AACTATGGAAATATCCATTT+TGG + chr3_4:42787713-42787732 None:intergenic 25.0%
! GAAATTCCTTATCATAACTA+TGG + chr3_4:42787728-42787747 None:intergenic 25.0%
! TTCTTCATCTTTATAAGCTT+AGG - chr3_4:42787757-42787776 Msa0501510:three_prime_UTR 25.0%
!! ATTATCTCTGGTGTTAATTT+AGG - chr3_4:42788191-42788210 Msa0501510:intron 25.0%
! AAAACATTTATGCATGCATA+TGG - chr3_4:42788470-42788489 Msa0501510:intron 25.0%
!!! ATTTTTTATTGGAAGACAAG+AGG - chr3_4:42788592-42788611 Msa0501510:intron 25.0%
!! TTGTCTTGTTGATATTATGT+TGG - chr3_4:42788658-42788677 Msa0501510:intron 25.0%
!! TGTCTTGTTGATATTATGTT+GGG - chr3_4:42788659-42788678 Msa0501510:intron 25.0%
! GAATTTGATCTTAGATACTA+AGG + chr3_4:42788838-42788857 None:intergenic 25.0%
! AAGAATATATCATTCTTGCA+TGG - chr3_4:42788861-42788880 Msa0501510:intron 25.0%
!! TAATGAGTTTTTCTATCATG+TGG - chr3_4:42789061-42789080 Msa0501510:intron 25.0%
!! TTTTCCTATGTTTTCATCTT+TGG + chr3_4:42789320-42789339 None:intergenic 25.0%
!! TCTTTACATTTTGAGCTTTT+TGG + chr3_4:42789350-42789369 None:intergenic 25.0%
! ATTGGAAGCAATGATATATT+TGG - chr3_4:42789561-42789580 Msa0501510:intron 25.0%
! ATTTGGTTACTATAACTCAA+TGG - chr3_4:42789578-42789597 Msa0501510:intron 25.0%
! AAACGATATATAATTTGGGA+GGG + chr3_4:42789719-42789738 None:intergenic 25.0%
! AAAACGATATATAATTTGGG+AGG + chr3_4:42789720-42789739 None:intergenic 25.0%
! TCATTAAGTATTACTCTATC+TGG - chr3_4:42789816-42789835 Msa0501510:CDS 25.0%
!! GTCATATAATTTGGGATTAA+AGG - chr3_4:42790114-42790133 Msa0501510:intron 25.0%
!!! CATGCATTTTAATATTGGAT+AGG - chr3_4:42790210-42790229 Msa0501510:intron 25.0%
! CTTTATCATCTACTGTTATT+TGG - chr3_4:42790676-42790695 Msa0501510:CDS 25.0%
! ATCTTTCAGTAATTGTTCAA+AGG + chr3_4:42790952-42790971 None:intergenic 25.0%
!!! AGTTGTGTAGTTTCTTTTTT+AGG + chr3_4:42791047-42791066 None:intergenic 25.0%
!! TCTTCTTTGATGATATATTC+GGG + chr3_4:42791092-42791111 None:intergenic 25.0%
!! CTCTTCTTTGATGATATATT+CGG + chr3_4:42791093-42791112 None:intergenic 25.0%
!! TATCATCAAAGAAGAGATTT+TGG - chr3_4:42791097-42791116 Msa0501510:intron 25.0%
! ATATTATGTTACAATCTTGG+AGG + chr3_4:42791139-42791158 None:intergenic 25.0%
! CATGTTATAGTTAAACTAGT+GGG + chr3_4:42791526-42791545 None:intergenic 25.0%
! ACATGTTATAGTTAAACTAG+TGG + chr3_4:42791527-42791546 None:intergenic 25.0%
! AGGATATTCATTCAATGATT+TGG + chr3_4:42791633-42791652 None:intergenic 25.0%
! TTTGCTTTCTATTGAAAAGT+AGG + chr3_4:42791653-42791672 None:intergenic 25.0%
!!! TTGTTATTTGATTTCATGTG+CGG + chr3_4:42791682-42791701 None:intergenic 25.0%
!! TTTCATTTTCTTCATTGAAG+GGG + chr3_4:42791846-42791865 None:intergenic 25.0%
!! CTTTCATTTTCTTCATTGAA+GGG + chr3_4:42791847-42791866 None:intergenic 25.0%
!! TCTTTCATTTTCTTCATTGA+AGG + chr3_4:42791848-42791867 None:intergenic 25.0%
! GTCTGTTTAAATTCCAAAAA+GGG + chr3_4:42792074-42792093 None:intergenic 25.0%
! GTAAAATGTTTATTGGATTG+TGG - chr3_4:42792112-42792131 Msa0501510:intron 25.0%
! ACATCTTTAAATCCTGAAAA+GGG + chr3_4:42792176-42792195 None:intergenic 25.0%
!!! AAAAATATGGTCTTGTCTAT+TGG + chr3_4:42792270-42792289 None:intergenic 25.0%
!!! ATAGACAAGACCATATTTTT+TGG - chr3_4:42792270-42792289 Msa0501510:intron 25.0%
!!! TAGACAAGACCATATTTTTT+GGG - chr3_4:42792271-42792290 Msa0501510:intron 25.0%
! ATACACATCTCCTATTAATA+TGG - chr3_4:42792361-42792380 Msa0501510:CDS 25.0%
! ACTAGTTGTTCCATATTAAT+AGG + chr3_4:42792374-42792393 None:intergenic 25.0%
!!! ATATGTTTAGTTCTAGTTGA+GGG - chr3_4:42792689-42792708 Msa0501510:five_prime_UTR 25.0%
ACTCCAGCTATTTATGTATT+TGG - chr3_4:42787799-42787818 Msa0501510:three_prime_UTR 30.0%
TCTCCAAATACATAAATAGC+TGG + chr3_4:42787805-42787824 None:intergenic 30.0%
!! AAAAATGCTGCTGATTTGAT+TGG - chr3_4:42787943-42787962 Msa0501510:CDS 30.0%
!!! GACAAATTGACACTCTTTTT+TGG - chr3_4:42788033-42788052 Msa0501510:CDS 30.0%
AACATTACACAACCACTTAT+TGG - chr3_4:42788056-42788075 Msa0501510:CDS 30.0%
! ATGTGACTTTTTGAACCAAT+GGG + chr3_4:42788348-42788367 None:intergenic 30.0%
! AATGTGACTTTTTGAACCAA+TGG + chr3_4:42788349-42788368 None:intergenic 30.0%
AATGATAATTGATCCGATGA+TGG - chr3_4:42788385-42788404 Msa0501510:intron 30.0%
! ACTAGCTTATGCATCAATAT+TGG - chr3_4:42788410-42788429 Msa0501510:intron 30.0%
TGGGTGAATATGTACTATAA+AGG - chr3_4:42788618-42788637 Msa0501510:intron 30.0%
!!! AAATTTTGTTTGACTTGCCA+TGG - chr3_4:42788758-42788777 Msa0501510:intron 30.0%
! AGAACTACACTCACAATTTT+TGG + chr3_4:42788933-42788952 None:intergenic 30.0%
CAAACACGTAAATACAGAAT+TGG + chr3_4:42788975-42788994 None:intergenic 30.0%
TCAACCTTATTGACCAAAAA+AGG - chr3_4:42789269-42789288 Msa0501510:intron 30.0%
!!! TATCTAATGCTCTCCTTTTT+TGG + chr3_4:42789285-42789304 None:intergenic 30.0%
AATGCCAAAGATGAAAACAT+AGG - chr3_4:42789313-42789332 Msa0501510:intron 30.0%
AATATCTTTGACAAAGCAAG+TGG - chr3_4:42789446-42789465 Msa0501510:intron 30.0%
!!! TATTTTTAGTGAGGAAGTCA+TGG + chr3_4:42789643-42789662 None:intergenic 30.0%
!!! CTGTAGTTGTATTTTTAGTG+AGG + chr3_4:42789652-42789671 None:intergenic 30.0%
CTCACTAAAAATACAACTAC+AGG - chr3_4:42789650-42789669 Msa0501510:intron 30.0%
AATTGAATGAAAAGAGAGTC+TGG + chr3_4:42789978-42789997 None:intergenic 30.0%
! TTTTCTCATACCATTTGTCA+AGG - chr3_4:42790009-42790028 Msa0501510:intron 30.0%
ACAAAATTGTCCTTGACAAA+TGG + chr3_4:42790022-42790041 None:intergenic 30.0%
GCCAAAACGTCATATAATTT+GGG - chr3_4:42790106-42790125 Msa0501510:intron 30.0%
! TCCCAAATTATATGACGTTT+TGG + chr3_4:42790110-42790129 None:intergenic 30.0%
TATATAGTCTCTGCCAAAAA+AGG + chr3_4:42790357-42790376 None:intergenic 30.0%
! AAATTTGAGATTGTTGGTGT+TGG - chr3_4:42790391-42790410 Msa0501510:intron 30.0%
TTCAATCCATGTTGAAAGAA+TGG - chr3_4:42790506-42790525 Msa0501510:intron 30.0%
CAATTTCCATTCTTTCAACA+TGG + chr3_4:42790515-42790534 None:intergenic 30.0%
ATTCTGAATGATGTCTTGTA+GGG + chr3_4:42790584-42790603 None:intergenic 30.0%
AATTCTGAATGATGTCTTGT+AGG + chr3_4:42790585-42790604 None:intergenic 30.0%
!! TCTCTTTTTGGTGAAAAAAG+AGG - chr3_4:42791015-42791034 Msa0501510:intron 30.0%
!! CTCTTTTTGGTGAAAAAAGA+GGG - chr3_4:42791016-42791035 Msa0501510:intron 30.0%
ACATATGTTTCCTTCAAACA+AGG - chr3_4:42791197-42791216 Msa0501510:intron 30.0%
!! TTTTGATTGATATGGTTACC+GGG + chr3_4:42791311-42791330 None:intergenic 30.0%
!!! GTTTTGATTGATATGGTTAC+CGG + chr3_4:42791312-42791331 None:intergenic 30.0%
AAGATAAAAACCTTGTTCTC+TGG - chr3_4:42791365-42791384 Msa0501510:intron 30.0%
ATAGTTAAACTAGTGGGATA+AGG + chr3_4:42791520-42791539 None:intergenic 30.0%
AACCTAGAGAGAGAAAAATT+AGG - chr3_4:42791871-42791890 Msa0501510:intron 30.0%
ACCTAGAGAGAGAAAAATTA+GGG - chr3_4:42791872-42791891 Msa0501510:intron 30.0%
GGTCTGTTTAAATTCCAAAA+AGG + chr3_4:42792075-42792094 None:intergenic 30.0%
GAATGACATTTGTATGACTT+TGG - chr3_4:42792141-42792160 Msa0501510:intron 30.0%
CACATCTTTAAATCCTGAAA+AGG + chr3_4:42792177-42792196 None:intergenic 30.0%
!! ATAGGAGATGTGTATTTTGA+AGG + chr3_4:42792356-42792375 None:intergenic 30.0%
! CACTTCTATTCATCTTTTAG+TGG - chr3_4:42792643-42792662 Msa0501510:five_prime_UTR 30.0%
!! GATATGTTTAGTTCTAGTTG+AGG - chr3_4:42792688-42792707 Msa0501510:five_prime_UTR 30.0%
!! TATGTTTAGTTCTAGTTGAG+GGG - chr3_4:42792690-42792709 Msa0501510:five_prime_UTR 30.0%
!!! TTGTTTTTTCTGTGTGTGTG+TGG + chr3_4:42787687-42787706 None:intergenic 35.0%
CTTGACTCTTTCTCTTGTAA+AGG - chr3_4:42787855-42787874 Msa0501510:three_prime_UTR 35.0%
AAGGCAATTCTTCCTTACTA+TGG - chr3_4:42787874-42787893 Msa0501510:three_prime_UTR 35.0%
TTTCCAACTAAGAAACCAAC+TGG - chr3_4:42787904-42787923 Msa0501510:exon 35.0%
TTCCAACTAAGAAACCAACT+GGG - chr3_4:42787905-42787924 Msa0501510:exon 35.0%
GATTGCAAATGACCAATAAG+TGG + chr3_4:42788071-42788090 None:intergenic 35.0%
! ATCTCTGGTGTTAATTTAGG+TGG - chr3_4:42788194-42788213 Msa0501510:intron 35.0%
! TCTCTGGTGTTAATTTAGGT+GGG - chr3_4:42788195-42788214 Msa0501510:intron 35.0%
! ATAAGTGTCTTTTCACCCAT+TGG - chr3_4:42788330-42788349 Msa0501510:intron 35.0%
! CATAAGCTAGTTTCCATCAT+CGG + chr3_4:42788401-42788420 None:intergenic 35.0%
! AAAAGCATGTTGGCTATCAA+AGG - chr3_4:42788534-42788553 Msa0501510:intron 35.0%
! AAAGCATGTTGGCTATCAAA+GGG - chr3_4:42788535-42788554 Msa0501510:intron 35.0%
TATTGGAAGACAAGAGGAAA+TGG - chr3_4:42788598-42788617 Msa0501510:intron 35.0%
ATTGGAAGACAAGAGGAAAT+GGG - chr3_4:42788599-42788618 Msa0501510:intron 35.0%
!! TTGACTTGCCATGGTATATT+TGG - chr3_4:42788767-42788786 Msa0501510:intron 35.0%
TTAGATACTAAGGAGAGGTA+AGG + chr3_4:42788828-42788847 None:intergenic 35.0%
TGATCTTAGATACTAAGGAG+AGG + chr3_4:42788833-42788852 None:intergenic 35.0%
!!! CTCTCCTTTTTTGGTCAATA+AGG + chr3_4:42789276-42789295 None:intergenic 35.0%
ATTCTAACTGAGATTCCCAT+TGG - chr3_4:42789400-42789419 Msa0501510:intron 35.0%
CTGCAATAATTTCCACCAAT+GGG + chr3_4:42789418-42789437 None:intergenic 35.0%
TCTGCAATAATTTCCACCAA+TGG + chr3_4:42789419-42789438 None:intergenic 35.0%
! CAGCAAATATGGATTTTGAG+AGG + chr3_4:42789536-42789555 None:intergenic 35.0%
!! TCCATATTTGCTGTTGTGAT+TGG - chr3_4:42789543-42789562 Msa0501510:intron 35.0%
TCCAATCACAACAGCAAATA+TGG + chr3_4:42789547-42789566 None:intergenic 35.0%
TGGAATCCACATATTGTTGT+GGG + chr3_4:42789623-42789642 None:intergenic 35.0%
ATGGAATCCACATATTGTTG+TGG + chr3_4:42789624-42789643 None:intergenic 35.0%
ACAACTACAGGTAAACACAA+TGG - chr3_4:42789662-42789681 Msa0501510:intron 35.0%
GATATATAATTTGGGAGGGA+GGG + chr3_4:42789715-42789734 None:intergenic 35.0%
GGCCAAAACGTCATATAATT+TGG - chr3_4:42790105-42790124 Msa0501510:intron 35.0%
ATTGGATAGGTACCTATACA+TGG - chr3_4:42790223-42790242 Msa0501510:intron 35.0%
TTTACCATTGAGCCATGTAT+AGG + chr3_4:42790238-42790257 None:intergenic 35.0%
!!! TTTTGGGTTGGTACCTTTTT+TGG - chr3_4:42790341-42790360 Msa0501510:intron 35.0%
TGGCAGAGACTATATAACAA+TGG - chr3_4:42790361-42790380 Msa0501510:intron 35.0%
GACTATATAACAATGGTGCA+AGG - chr3_4:42790368-42790387 Msa0501510:intron 35.0%
! GCAAGGAAATTTGAGATTGT+TGG - chr3_4:42790385-42790404 Msa0501510:intron 35.0%
AGAATGGAAATTGCAGAACA+AGG - chr3_4:42790522-42790541 Msa0501510:intron 35.0%
TTTAATGGCGTCGTCTAATA+TGG - chr3_4:42790823-42790842 Msa0501510:CDS 35.0%
! CTTCTCTACTCTTCTCTTTT+TGG - chr3_4:42791003-42791022 Msa0501510:intron 35.0%
!!! AGATTTTGGAGTTCTCTAAG+AGG - chr3_4:42791111-42791130 Msa0501510:intron 35.0%
! TTCAAGTACACCTTGTTTGA+AGG + chr3_4:42791210-42791229 None:intergenic 35.0%
TTGCAAATTACCAGAGAACA+AGG + chr3_4:42791378-42791397 None:intergenic 35.0%
CTTCTTTGCTCTTCTCTATA+TGG - chr3_4:42791438-42791457 Msa0501510:CDS 35.0%
ATAGAGAGAAACAGATGATG+AGG - chr3_4:42791789-42791808 Msa0501510:intron 35.0%
TAGAGAGAAACAGATGATGA+GGG - chr3_4:42791790-42791809 Msa0501510:intron 35.0%
AAAAATTAGGGCCAACTTGT+TGG - chr3_4:42791884-42791903 Msa0501510:intron 35.0%
! ATATCCTCTCATTCCCTTTT+TGG - chr3_4:42792058-42792077 Msa0501510:intron 35.0%
AATTCCAAAAAGGGAATGAG+AGG + chr3_4:42792065-42792084 None:intergenic 35.0%
TCTATCAACAAAGATACGCA+TGG + chr3_4:42792321-42792340 None:intergenic 35.0%
ACAACTAGTAGCTCTTTGAA+TGG - chr3_4:42792385-42792404 Msa0501510:CDS 35.0%
TTAGTTTATGCAGTTGTTCG+AGG - chr3_4:42792486-42792505 Msa0501510:CDS 35.0%
!!! TTTTTTCTGTGTGTGTGTGG+AGG + chr3_4:42787684-42787703 None:intergenic 40.0%
GGAAAGTCAATGCCATAGTA+AGG + chr3_4:42787889-42787908 None:intergenic 40.0%
! TATTAGCTTCCTAACCCACA+TGG - chr3_4:42788110-42788129 Msa0501510:CDS 40.0%
! ATTAGCTTCCTAACCCACAT+GGG - chr3_4:42788111-42788130 Msa0501510:CDS 40.0%
! CCATTTTGCTTGTGCATGTT+AGG + chr3_4:42788297-42788316 None:intergenic 40.0%
CCTAACATGCACAAGCAAAA+TGG - chr3_4:42788294-42788313 Msa0501510:intron 40.0%
GGTGAAAAGACACTTATGTG+CGG + chr3_4:42788327-42788346 None:intergenic 40.0%
AGCTGCAACCAAATATACCA+TGG + chr3_4:42788778-42788797 None:intergenic 40.0%
TTGGTTGCAGCTGAAAAAGT+AGG - chr3_4:42788786-42788805 Msa0501510:intron 40.0%
! CATGGTGTTAACTTTGCATC+TGG - chr3_4:42788879-42788898 Msa0501510:intron 40.0%
AAACACCCCACAACAATATG+TGG - chr3_4:42789614-42789633 Msa0501510:intron 40.0%
GGAATCCACATATTGTTGTG+GGG + chr3_4:42789622-42789641 None:intergenic 40.0%
CGATATATAATTTGGGAGGG+AGG + chr3_4:42789716-42789735 None:intergenic 40.0%
!! ATTGTTGGTGTTGGTCCAAT+TGG - chr3_4:42790400-42790419 Msa0501510:intron 40.0%
TGTTCTTGAGCCTGCTTATT+GGG + chr3_4:42790432-42790451 None:intergenic 40.0%
TTGTTCTTGAGCCTGCTTAT+TGG + chr3_4:42790433-42790452 None:intergenic 40.0%
TCCATTAAGCTTACAACTCC+CGG - chr3_4:42791290-42791309 Msa0501510:intron 40.0%
AGAGAGAAACAGATGATGAG+GGG - chr3_4:42791791-42791810 Msa0501510:intron 40.0%
! GCCCTAATTTTTCTCTCTCT+AGG + chr3_4:42791876-42791895 None:intergenic 40.0%
!!! TGGTTTTATACGCCCTTTTC+AGG - chr3_4:42792161-42792180 Msa0501510:intron 40.0%
! GATGTGAAAGATGCTTGTTG+TGG - chr3_4:42792191-42792210 Msa0501510:intron 40.0%
!! AAAGATGCTTGTTGTGGACT+TGG - chr3_4:42792197-42792216 Msa0501510:intron 40.0%
TTGGCACAAAGTCTTGAAAC+TGG + chr3_4:42792251-42792270 None:intergenic 40.0%
GGACTGGATCCCAAAAAATA+TGG + chr3_4:42792283-42792302 None:intergenic 40.0%
AACACAATTGTAGCGCAATC+TGG - chr3_4:42792553-42792572 Msa0501510:CDS 40.0%
! GGAGACTCACTTGTTGATGT+TGG - chr3_4:42787820-42787839 Msa0501510:three_prime_UTR 45.0%
! CTCCCAGTTGGTTTCTTAGT+TGG + chr3_4:42787910-42787929 None:intergenic 45.0%
CAACTAAGAAACCAACTGGG+AGG - chr3_4:42787908-42787927 Msa0501510:exon 45.0%
ATAATCGAACCTGAGACCTG+AGG + chr3_4:42788176-42788195 None:intergenic 45.0%
GTCTCAGGTTCGATTATCTC+TGG - chr3_4:42788179-42788198 Msa0501510:intron 45.0%
! CATGTTGGCTATCAAAGGGT+AGG - chr3_4:42788539-42788558 Msa0501510:intron 45.0%
GATACTAAGGAGAGGTAAGG+TGG + chr3_4:42788825-42788844 None:intergenic 45.0%
GGTGTTAACTTTGCATCTGG+AGG - chr3_4:42788882-42788901 Msa0501510:intron 45.0%
CTAACTGAGATTCCCATTGG+TGG - chr3_4:42789403-42789422 Msa0501510:intron 45.0%
GGTACCTATACATGGCTCAA+TGG - chr3_4:42790231-42790250 Msa0501510:intron 45.0%
CTTATTGGGCAGCATCCAAT+TGG + chr3_4:42790418-42790437 None:intergenic 45.0%
CTAATATGGACCCGGTCTAA+AGG - chr3_4:42790837-42790856 Msa0501510:CDS 45.0%
TGTATCCGCCAGATCAATGT+AGG - chr3_4:42791261-42791280 Msa0501510:intron 45.0%
GTATCCGCCAGATCAATGTA+GGG - chr3_4:42791262-42791281 Msa0501510:intron 45.0%
ACATCCCTACATTGATCTGG+CGG + chr3_4:42791269-42791288 None:intergenic 45.0%
GACACATCCCTACATTGATC+TGG + chr3_4:42791272-42791291 None:intergenic 45.0%
ACCGGGAGTTGTAAGCTTAA+TGG + chr3_4:42791294-42791313 None:intergenic 45.0%
AAATGCGGGGATTGTGTACA+GGG + chr3_4:42791401-42791420 None:intergenic 45.0%
ATCCCCGCATTTCTACATGA+AGG - chr3_4:42791409-42791428 Msa0501510:CDS 45.0%
TGCCTTCATGTAGAAATGCG+GGG + chr3_4:42791414-42791433 None:intergenic 45.0%
CTGCCTTCATGTAGAAATGC+GGG + chr3_4:42791415-42791434 None:intergenic 45.0%
GCTGCCTTCATGTAGAAATG+CGG + chr3_4:42791416-42791435 None:intergenic 45.0%
GAGTGGAAGAGACATGACTT+TGG - chr3_4:42791591-42791610 Msa0501510:intron 45.0%
TTGTAGCGCAATCTGGTAGA+AGG - chr3_4:42792560-42792579 Msa0501510:CDS 45.0%
!!! ATTATTATTTTAAGAAAAAT+GGG + chr3_4:42790322-42790341 None:intergenic 5.0%
!!! AATTATTATTTTAAGAAAAA+TGG + chr3_4:42790323-42790342 None:intergenic 5.0%
!!! TTTTCTTAAAATAATAATTT+TGG - chr3_4:42790324-42790343 Msa0501510:intron 5.0%
!!! TTTCTTAAAATAATAATTTT+GGG - chr3_4:42790325-42790344 Msa0501510:intron 5.0%
GTGGAGGTTGTGATGGCTTT+GGG + chr3_4:42787668-42787687 None:intergenic 50.0%
TGTGGAGGTTGTGATGGCTT+TGG + chr3_4:42787669-42787688 None:intergenic 50.0%
TGTGTGTGTGGAGGTTGTGA+TGG + chr3_4:42787675-42787694 None:intergenic 50.0%
CCATTGCTAAACCTCCCAGT+TGG + chr3_4:42787922-42787941 None:intergenic 50.0%
CCAACTGGGAGGTTTAGCAA+TGG - chr3_4:42787919-42787938 Msa0501510:CDS 50.0%
!! TTGGCCTAGTGGCATTGACT+TGG - chr3_4:42788134-42788153 Msa0501510:intron 50.0%
!! TGGCCTAGTGGCATTGACTT+GGG - chr3_4:42788135-42788154 Msa0501510:intron 50.0%
AGTCCCAAGTCAATGCCACT+AGG + chr3_4:42788141-42788160 None:intergenic 50.0%
! GACTTGAGAGTGTGTTCCTC+AGG - chr3_4:42788157-42788176 Msa0501510:intron 50.0%
! AACTTTGCATCTGGAGGTGC+TGG - chr3_4:42788888-42788907 Msa0501510:intron 50.0%
TTGGATGCTGCCCAATAAGC+AGG - chr3_4:42790419-42790438 Msa0501510:intron 50.0%
ATATGGACCCGGTCTAAAGG+TGG - chr3_4:42790840-42790859 Msa0501510:CDS 50.0%
AGGGAGATCCACCTTTAGAC+CGG + chr3_4:42790851-42790870 None:intergenic 50.0%
GAAATGCGGGGATTGTGTAC+AGG + chr3_4:42791402-42791421 None:intergenic 50.0%
!! TTAGGGCCAACTTGTTGGAG+AGG - chr3_4:42791889-42791908 Msa0501510:intron 50.0%
!! TAGGGCCAACTTGTTGGAGA+GGG - chr3_4:42791890-42791909 Msa0501510:intron 50.0%
TTTCCCCCTCTCCAACAAGT+TGG + chr3_4:42791898-42791917 None:intergenic 50.0%
TTGGAGAGGGGGAAATAGAG+AGG - chr3_4:42791903-42791922 Msa0501510:intron 50.0%
GCTTCCTAACCCACATGGGT+TGG - chr3_4:42788115-42788134 Msa0501510:CDS 55.0%
TAGGCCAACCCATGTGGGTT+AGG + chr3_4:42788122-42788141 None:intergenic 55.0%
GAGTGTGTTCCTCAGGTCTC+AGG - chr3_4:42788164-42788183 Msa0501510:intron 55.0%
GGCGTCGTCTAATATGGACC+CGG - chr3_4:42790829-42790848 Msa0501510:CDS 55.0%
GGGAGATCCACCTTTAGACC+GGG + chr3_4:42790850-42790869 None:intergenic 55.0%
!! AGGGCCAACTTGTTGGAGAG+GGG - chr3_4:42791891-42791910 Msa0501510:intron 55.0%
GGATCCAGTCCATCCTACTG+AGG - chr3_4:42792292-42792311 Msa0501510:intron 55.0%
ATACGCATGGCTGCCTCAGT+AGG + chr3_4:42792308-42792327 None:intergenic 55.0%
!! ACCCACATGGGTTGGCCTAG+TGG - chr3_4:42788123-42788142 Msa0501510:intron 60.0%
GCCACTAGGCCAACCCATGT+GGG + chr3_4:42788127-42788146 None:intergenic 60.0%
TGCCACTAGGCCAACCCATG+TGG + chr3_4:42788128-42788147 None:intergenic 60.0%
! GGTAAGGTGGTGACGTGGCA+AGG + chr3_4:42788812-42788831 None:intergenic 60.0%
! GGAGAGGTAAGGTGGTGACG+TGG + chr3_4:42788817-42788836 None:intergenic 60.0%
!! GGGCCAACTTGTTGGAGAGG+GGG - chr3_4:42791892-42791911 Msa0501510:intron 60.0%
GCTGCCTCAGTAGGATGGAC+TGG + chr3_4:42792299-42792318 None:intergenic 60.0%
GCATGGCTGCCTCAGTAGGA+TGG + chr3_4:42792304-42792323 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 42787602 42792720 42787602 ID=Msa0501510;Name=Msa0501510
chr3_4 mRNA 42787602 42792720 42787602 ID=Msa0501510-mRNA-1;Parent=Msa0501510;Name=Msa0501510-mRNA-1;_AED=0.29;_eAED=0.29;_QI=113|1|1|1|0.8|0.66|6|294|365
chr3_4 exon 42787602 42787717 42787602 ID=Msa0501510-mRNA-1:exon:9071;Parent=Msa0501510-mRNA-1
chr3_4 exon 42787741 42788139 42787741 ID=Msa0501510-mRNA-1:exon:9070;Parent=Msa0501510-mRNA-1
chr3_4 exon 42789706 42789955 42789706 ID=Msa0501510-mRNA-1:exon:9069;Parent=Msa0501510-mRNA-1
chr3_4 exon 42790651 42790884 42790651 ID=Msa0501510-mRNA-1:exon:9068;Parent=Msa0501510-mRNA-1
chr3_4 exon 42791384 42791526 42791384 ID=Msa0501510-mRNA-1:exon:9067;Parent=Msa0501510-mRNA-1
chr3_4 exon 42792358 42792720 42792358 ID=Msa0501510-mRNA-1:exon:9066;Parent=Msa0501510-mRNA-1
chr3_4 five_prime_UTR 42792608 42792720 42792608 ID=Msa0501510-mRNA-1:five_prime_utr;Parent=Msa0501510-mRNA-1
chr3_4 CDS 42792358 42792607 42792358 ID=Msa0501510-mRNA-1:cds;Parent=Msa0501510-mRNA-1
chr3_4 CDS 42791384 42791526 42791384 ID=Msa0501510-mRNA-1:cds;Parent=Msa0501510-mRNA-1
chr3_4 CDS 42790651 42790884 42790651 ID=Msa0501510-mRNA-1:cds;Parent=Msa0501510-mRNA-1
chr3_4 CDS 42789706 42789955 42789706 ID=Msa0501510-mRNA-1:cds;Parent=Msa0501510-mRNA-1
chr3_4 CDS 42787919 42788139 42787919 ID=Msa0501510-mRNA-1:cds;Parent=Msa0501510-mRNA-1
chr3_4 three_prime_UTR 42787741 42787918 42787741 ID=Msa0501510-mRNA-1:three_prime_utr;Parent=Msa0501510-mRNA-1
chr3_4 three_prime_UTR 42787602 42787717 42787602 ID=Msa0501510-mRNA-1:three_prime_utr;Parent=Msa0501510-mRNA-1
Gene Sequence

>Msa0501510

ATGGATATTTCCATAGTTATGATAAGGAATTTCTTTCTATCTTTCTTCATCTTTATAAGCTTAGGATTCTTAGAAGCTCAAAAGACTCCAGCTATTTATGTATTTGGAGACTCACTTGTTGATGTTGGCAACAACAATCACTTGACTCTTTCTCTTGTAAAGGCAATTCTTCCTTACTATGGCATTGACTTTCCAACTAAGAAACCAACTGGGAGGTTTAGCAATGGCAAAAATGCTGCTGATTTGATTGCTGAAAAAGTAGGCCTTGCCACGTCACCACCTTACCTCTCCTTAGTATCTAAGATCAAATTCAACAAGAATATATCATTCTTGCATGGTGTTAACTTTGCATCTGGAGGTGCTGGAATATTTAATCGCACAGATCCAAAAATTAGACAATCAATATCTTTGACAAAGCAAGTGGACTATTATTCACAAGTGCATGAAAAATTGACACAACAAACAGAAGCATCTACACTTCAGAAACACCTCTCAAAATCCATATTTGCTGTTGTGATTGGAAGCAATGATATATTTGGTTACTATAACTCAATGGATCTTCAAAAGAAAAACACCCCACAACAATATGTGGATTCCATGACTTCCTCACTAAAAATACAACTACAGAGACTATATAACAATGGTGCAAGGAAATTTGAGATTGTTGGTGTTGGTCCAATTGGATGCTGCCCAATAAGCAGGCTCAAGAACAAAACAGAATGTTTTTCACAAACCAATTTATTGTCAATTAAATATAATAAAGGGCTTCAATCCATGTTGAAAGAATGGAAATTGCAGAACAAGGACTTAATAAGTTACTCATATTTTGATAGTTTTGCTGCCCTACAAGACATCATTCAGAATTCAATTTCTTACGGATTTAAAGATGTGAAAGATGCTTGTTGTGGACTTGGTGAGCTGAATGCTCAATTTTTTTGTACACCAGTTTCAAGACTTTGTGCCAATAGACAAGACCATATTTTTTGGGATCCAGTCCATCCTACTGAGGCAGCCATGCGTATCTTTGTTGATAGACTTTATAATGGACCTTCAAAATACACATCTCCTATTAATATGGAACAACTAGTAGCTCTTTGA
Protein sequence

>Msa0501510

MDISIVMIRNFFLSFFIFISLGFLEAQKTPAIYVFGDSLVDVGNNNHLTLSLVKAILPYYGIDFPTKKPTGRFSNGKNAADLIAEKVGLATSPPYLSLVSKIKFNKNISFLHGVNFASGGAGIFNRTDPKIRQSISLTKQVDYYSQVHEKLTQQTEASTLQKHLSKSIFAVVIGSNDIFGYYNSMDLQKKNTPQQYVDSMTSSLKIQLQRLYNNGARKFEIVGVGPIGCCPISRLKNKTECFSQTNLLSIKYNKGLQSMLKEWKLQNKDLISYSYFDSFAALQDIIQNSISYGFKDVKDACCGLGELNAQFFCTPVSRLCANRQDHIFWDPVHPTEAAMRIFVDRLYNGPSKYTSPINMEQLVAL*