AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0650640


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0650640 MtrunA17_Chr4g0042971 61.842 152 39 3 1 133 1 152 5.67e-47 151
Msa0650640 MtrunA17_Chr4g0042971 43.396 159 61 5 65 202 6 156 1.37e-18 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score

Find 48 sgRNAs with CRISPR-Local

Find 600 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACTTGGTAGAAACTTATT+TGG 0.193374 4_3:-57871550 None:intergenic
CACACCTGCTTCTTCGGTTT+TGG 0.199931 4_3:-57871731 None:intergenic
GTTTCTACCAAGTGAGGTTT+TGG 0.234806 4_3:+57871558 Msa0650640:CDS
TCGGGTTTGGCTGGCTCTTC+TGG 0.238096 4_3:-57874015 None:intergenic
AAAACCAAAGGTGCGGTTAA+TGG 0.283737 4_3:+57879717 Msa0650640:CDS
TTTGGCTGGCTCTTCTGGTT+TGG 0.325140 4_3:-57874010 None:intergenic
ATCAAGCACACCTGCTTCTT+CGG 0.347454 4_3:-57871737 None:intergenic
TTTGCCAATAGGATCTGGTT+TGG 0.364938 4_3:-57879697 None:intergenic
TTTGGCAGGCTCCACAGGTT+TGG 0.367487 4_3:-57871713 None:intergenic
CTGGCTCTTCTGGTTTGGAC+TGG 0.372877 4_3:-57874005 None:intergenic
ACCAATCACACCTTCGGGTT+TGG 0.373855 4_3:-57874028 None:intergenic
TTGCCAATAGGATCTGGTTT+GGG 0.376061 4_3:-57879696 None:intergenic
AGCACCACCAATCACACCTT+CGG 0.387425 4_3:-57874034 None:intergenic
AGCACCATTAACCGCACCTT+TGG 0.426753 4_3:-57879721 None:intergenic
CAGTTGTAGAGCAAATTGAT+AGG 0.431190 4_3:+57871671 Msa0650640:CDS
GCTTCAGCACAAACAACTAT+AGG 0.435825 4_3:+57873919 Msa0650640:CDS
GCACCACCAATCACACCTTC+GGG 0.442267 4_3:-57874033 None:intergenic
ATCACACCTTCGGGTTTGGC+TGG 0.446616 4_3:-57874024 None:intergenic
AAACCCAAACCAGATCCTAT+TGG 0.473112 4_3:+57879693 Msa0650640:CDS
GCCAAACCCGAAGGTGTGAT+TGG 0.484923 4_3:+57874027 Msa0650640:CDS
CTGGACAAAATCAGCAGCCT+TGG 0.492880 4_3:-57873986 None:intergenic
GAAGAAGCAGGTGTGCTTGA+TGG 0.500199 4_3:+57871739 Msa0650640:CDS
GAATCAGCACAAACAACTGT+AGG 0.517261 4_3:+57871601 Msa0650640:CDS
GCACTCCCCAAAACCTCACT+TGG 0.541506 4_3:-57871565 None:intergenic
CCTGCCAAAACCGAAGAAGC+AGG 0.546448 4_3:+57871727 Msa0650640:CDS
GGTGCTACAAAGTCTGTTGG+AGG 0.564564 4_3:+57879738 Msa0650640:CDS
ACTGTAGGAAATGCTGCAGC+TGG 0.565617 4_3:+57879588 Msa0650640:CDS
CAAACAACTGTAGGGAAACA+AGG 0.566889 4_3:+57871610 Msa0650640:CDS
AAATAAGTTTCTACCAAGTG+AGG 0.567992 4_3:+57871552 Msa0650640:CDS
GCTGGTGTTCATAAGACTGT+AGG 0.573068 4_3:+57879639 Msa0650640:CDS
AATGGTGCTACAAAGTCTGT+TGG 0.575777 4_3:+57879735 Msa0650640:CDS
ACTGTGGGAAATGCTGCAGC+TGG 0.580044 4_3:+57879621 Msa0650640:CDS
AGTTGTAGAGCAAATTGATA+GGG 0.586465 4_3:+57871672 Msa0650640:CDS
TTATGTTCATTCCAAACCTG+TGG 0.590330 4_3:+57871702 Msa0650640:CDS
GCTTCAGCACAGAAAACTGT+AGG 0.594928 4_3:+57879573 Msa0650640:CDS
GATCCTATTGGCAAAACCAA+AGG 0.604323 4_3:+57879705 Msa0650640:CDS
CTTGGTAGCATACTCTCCTA+CGG 0.606883 4_3:-57873968 None:intergenic
GAAGAGCCAGCCAAACCCGA+AGG 0.622241 4_3:+57874018 Msa0650640:CDS
AATCAGCACAAACAACTGTA+GGG 0.628168 4_3:+57871602 Msa0650640:CDS
GAAGGTTGCAACTTCTGCAG+AGG 0.629564 4_3:+57871636 Msa0650640:CDS
CGTAGGAGAGTATGCTACCA+AGG 0.632082 4_3:+57873969 Msa0650640:CDS
TGTAGGGAAACAAGGTGAGA+AGG 0.638781 4_3:+57871618 Msa0650640:CDS
GCTAATGTTCAGAAGACCGT+AGG 0.649202 4_3:+57873952 Msa0650640:CDS
AGCTGGTGCCCAGAAAACTG+TGG 0.654418 4_3:+57879605 Msa0650640:CDS
TGTAGGAGACTATGCTACCA+TGG 0.655972 4_3:+57879656 Msa0650640:CDS
AAACCCGAAGGTGTGATTGG+TGG 0.660272 4_3:+57874030 Msa0650640:CDS
TATTGGCAAAACCAAAGGTG+CGG 0.681681 4_3:+57879710 Msa0650640:CDS
GCTGGTGCCCAGAAAACTGT+GGG 0.683027 4_3:+57879606 Msa0650640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTAATTAATTAATTAATA+AGG + chr4_3:57874111-57874130 Msa0650640:intron 0.0%
!!! TTTTCTTTTTTAAGAAAAAA+TGG - chr4_3:57873250-57873269 None:intergenic 10.0%
!! AAAAAGAAAAAAAAAGAAAA+AGG + chr4_3:57873260-57873279 Msa0650640:intron 10.0%
!!! TTTTTCTAATATATTATTTG+AGG - chr4_3:57873594-57873613 None:intergenic 10.0%
!! TGTATATTAATAGAAAAATA+TGG + chr4_3:57873689-57873708 Msa0650640:intron 10.0%
!! TTTAAATATACTATAAAATG+AGG - chr4_3:57874463-57874482 None:intergenic 10.0%
!!! AGTTATATTTTGATTATATA+TGG - chr4_3:57875013-57875032 None:intergenic 10.0%
!! TATAACTATGTAAAAAAAAT+TGG - chr4_3:57876235-57876254 None:intergenic 10.0%
!! TGATAATATGTATATAAAAA+AGG - chr4_3:57876272-57876291 None:intergenic 10.0%
!! AAAGATTAATCATTATTAAA+CGG - chr4_3:57876649-57876668 None:intergenic 10.0%
!! AATTTGTAACAATAATTTAA+GGG - chr4_3:57879143-57879162 None:intergenic 10.0%
!!! TAATTTGTAACAATAATTTA+AGG - chr4_3:57879144-57879163 None:intergenic 10.0%
!! ATTAATTAAAAAATAATGAG+TGG + chr4_3:57879241-57879260 Msa0650640:intron 10.0%
!!! TAAGAAACAATTAACTTTTT+TGG - chr4_3:57872363-57872382 None:intergenic 15.0%
!!! GTTAATTGTTTCTTATAATA+AGG + chr4_3:57872368-57872387 Msa0650640:intron 15.0%
!! TATTGTATTGAAAAATGAAA+TGG + chr4_3:57872506-57872525 Msa0650640:intron 15.0%
!! ATACCTAAAAAAACAATATT+TGG + chr4_3:57872875-57872894 Msa0650640:intron 15.0%
!!! AATCCAAATATTGTTTTTTT+AGG - chr4_3:57872881-57872900 None:intergenic 15.0%
!!! ATAATATTTTATGTGGTTTT+AGG + chr4_3:57873220-57873239 Msa0650640:intron 15.0%
!!! TAATATTTTATGTGGTTTTA+GGG + chr4_3:57873221-57873240 Msa0650640:intron 15.0%
!! AAAAAAAAAGAAAAAGGAAT+GGG + chr4_3:57873266-57873285 Msa0650640:intron 15.0%
!! ATGCATTAAAATACATAATA+AGG - chr4_3:57873554-57873573 None:intergenic 15.0%
!!! AAAATTACACATTTTCAAAT+AGG + chr4_3:57873729-57873748 Msa0650640:intron 15.0%
!! TATTATTTAAGAAATGAGAT+AGG + chr4_3:57874073-57874092 Msa0650640:intron 15.0%
!! ATTAATGACAAAAATTAGTT+CGG - chr4_3:57874349-57874368 None:intergenic 15.0%
!! AACAAAAAATTTGTAACTTT+GGG + chr4_3:57874703-57874722 Msa0650640:intron 15.0%
!! ACATTTCGTATTATATAAAT+CGG + chr4_3:57874742-57874761 Msa0650640:intron 15.0%
!! AATAAGATAGTAAATAGAAT+TGG - chr4_3:57875682-57875701 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr4_3:57876012-57876031 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:57876011-57876030 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:57876011-57876030 None:intergenic 15.0%
!! GAAAACTAAAATAAACATAA+GGG - chr4_3:57876012-57876031 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG - chr4_3:57876011-57876030 None:intergenic 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:57876011-57876030 Msa0650640:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:57876012-57876031 Msa0650640:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:57876011-57876030 Msa0650640:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:57876012-57876031 Msa0650640:intron 15.0%
!! TGAAAACTAAAATAAACATA+AGG + chr4_3:57876011-57876030 Msa0650640:intron 15.0%
!! GAAAACTAAAATAAACATAA+GGG + chr4_3:57876012-57876031 Msa0650640:intron 15.0%
!! AAATAAAATGAAAGATTCAA+AGG + chr4_3:57877261-57877280 Msa0650640:intron 15.0%
!! GATTGTTAATATTTCATTAA+GGG + chr4_3:57878575-57878594 Msa0650640:intron 15.0%
!!! AACTGTTATTTATAATATGA+GGG - chr4_3:57879445-57879464 None:intergenic 15.0%
!! AGCATCTTGATTAATTAATA+AGG + chr4_3:57871799-57871818 Msa0650640:intron 20.0%
!! TATCTTATCATGTAATCTAT+AGG + chr4_3:57871861-57871880 Msa0650640:intron 20.0%
!!! ACTTTAAAACATAAACAAAC+AGG - chr4_3:57871970-57871989 None:intergenic 20.0%
!! GTACTAATTAGAGTTATAAA+AGG + chr4_3:57872467-57872486 Msa0650640:intron 20.0%
!!! TGAACTCATAATATTTTATG+TGG + chr4_3:57873213-57873232 Msa0650640:intron 20.0%
!!! AATATTTTATGTGGTTTTAG+GGG + chr4_3:57873222-57873241 Msa0650640:intron 20.0%
!! GAAAAAAAAAGAAAAAGGAA+TGG + chr4_3:57873265-57873284 Msa0650640:intron 20.0%
!! AAAAAAAAGAAAAAGGAATG+GGG + chr4_3:57873267-57873286 Msa0650640:intron 20.0%
!! CATACATAAATAATACAGTA+GGG - chr4_3:57873407-57873426 None:intergenic 20.0%
!! TCATACATAAATAATACAGT+AGG - chr4_3:57873408-57873427 None:intergenic 20.0%
!!! GTTGAAGATTTTAATAATGT+GGG - chr4_3:57873445-57873464 None:intergenic 20.0%
!! ACTTATACACATACTTAAAA+GGG - chr4_3:57874153-57874172 None:intergenic 20.0%
!! AACTTATACACATACTTAAA+AGG - chr4_3:57874154-57874173 None:intergenic 20.0%
!! ATAAATTATGCAACAGAATT+AGG - chr4_3:57874265-57874284 None:intergenic 20.0%
!! TAATCTAAAAATGAACAAAG+TGG - chr4_3:57874617-57874636 None:intergenic 20.0%
!!! ATCGTGTATAAATGAAATTT+TGG + chr4_3:57874647-57874666 Msa0650640:intron 20.0%
!! GAACAAAAAATTTGTAACTT+TGG + chr4_3:57874702-57874721 Msa0650640:intron 20.0%
!! ACAAAAAATTTGTAACTTTG+GGG + chr4_3:57874704-57874723 Msa0650640:intron 20.0%
!! CAAATAGACAATAATCAATA+TGG - chr4_3:57874952-57874971 None:intergenic 20.0%
!!! TTTTGTACAATTTGGATATT+TGG - chr4_3:57875063-57875082 None:intergenic 20.0%
!!! TATCTTATTATGTTCTCTTT+TGG + chr4_3:57875693-57875712 Msa0650640:intron 20.0%
!!! ATTAAGCCGTATTTTTATTT+AGG - chr4_3:57875778-57875797 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:57875817-57875836 Msa0650640:intron 20.0%
!!! TGAAAACTTTTAAAACGTAA+GGG - chr4_3:57875873-57875892 None:intergenic 20.0%
!!! TTGAAAACTTTTAAAACGTA+AGG - chr4_3:57875874-57875893 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG + chr4_3:57875817-57875836 Msa0650640:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+CGG + chr4_3:57875817-57875836 Msa0650640:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:57875817-57875836 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:57875817-57875836 None:intergenic 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:57875817-57875836 None:intergenic 20.0%
!! TGAAAACTAAAATAAACGTA+TGG + chr4_3:57876102-57876121 Msa0650640:intron 20.0%
!! GAAAACTAAAATAAACGTAT+GGG + chr4_3:57876103-57876122 Msa0650640:intron 20.0%
!! TTGAAACTTTCAAAACATAA+GGG + chr4_3:57876132-57876151 Msa0650640:intron 20.0%
!!! GTTTATTTTAGTTTTCAAGT+TGG - chr4_3:57875817-57875836 None:intergenic 20.0%
!!! TAAGAAGTGTATATAGTAAT+AGG + chr4_3:57876332-57876351 Msa0650640:intron 20.0%
!!! AAGAAGTGTATATAGTAATA+GGG + chr4_3:57876333-57876352 Msa0650640:intron 20.0%
!! ATAATGATTAATCTTTGTTG+AGG + chr4_3:57876653-57876672 Msa0650640:intron 20.0%
!! AATCCATTAATAAATGTGAA+TGG + chr4_3:57876883-57876902 Msa0650640:intron 20.0%
!!! CACTTCGATTATATTTTTAA+GGG - chr4_3:57877029-57877048 None:intergenic 20.0%
!!! ACACTTCGATTATATTTTTA+AGG - chr4_3:57877030-57877049 None:intergenic 20.0%
!! TAAAAATATAATCGAAGTGT+TGG + chr4_3:57877030-57877049 Msa0650640:intron 20.0%
!!! GATCATCTCAAATTATATTT+TGG - chr4_3:57877059-57877078 None:intergenic 20.0%
!!! AAAGAATCTAAAATGTACAA+TGG + chr4_3:57877496-57877515 Msa0650640:intron 20.0%
!!! ACAATACTAGAATTTTTGAA+AGG + chr4_3:57877681-57877700 Msa0650640:intron 20.0%
!!! CAATACTAGAATTTTTGAAA+GGG + chr4_3:57877682-57877701 Msa0650640:intron 20.0%
!! TAACGAATATATCCATAAAA+AGG + chr4_3:57878247-57878266 Msa0650640:intron 20.0%
!! TAACGAATATATCCATAAAA+GGG - chr4_3:57878247-57878266 None:intergenic 20.0%
!! ATAACGAATATATCCATAAA+AGG - chr4_3:57878246-57878265 None:intergenic 20.0%
!! GGATTGTTAATATTTCATTA+AGG + chr4_3:57878574-57878593 Msa0650640:intron 20.0%
!!! AAAATATTTGATAGTACTTG+CGG - chr4_3:57878863-57878882 None:intergenic 20.0%
!! TCATTGTTATCAATATCATT+TGG - chr4_3:57878904-57878923 None:intergenic 20.0%
!! TTTCTTTATTGTGATTTAGT+GGG - chr4_3:57879055-57879074 None:intergenic 20.0%
!!! TTTTCTTTATTGTGATTTAG+TGG - chr4_3:57879056-57879075 None:intergenic 20.0%
!! TTTATATATTCTTCATGCTT+GGG + chr4_3:57879079-57879098 Msa0650640:intron 20.0%
!! TAATACCAAATAATACAGTA+GGG - chr4_3:57879334-57879353 None:intergenic 20.0%
!! ATAATACCAAATAATACAGT+AGG - chr4_3:57879335-57879354 None:intergenic 20.0%
!!! TATTTATGTATGAGTTGATA+TGG + chr4_3:57879352-57879371 Msa0650640:intron 20.0%
!!! GAACTGTTATTTATAATATG+AGG - chr4_3:57879446-57879465 None:intergenic 20.0%
! ACAATCAATACTTAAAGAGA+TGG - chr4_3:57871837-57871856 None:intergenic 25.0%
! TATCATGTAATCTATAGGAT+AGG + chr4_3:57871866-57871885 Msa0650640:intron 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG + chr4_3:57872373-57872392 Msa0650640:intron 25.0%
! TGCAAATGGTTCAATTATTA+TGG + chr4_3:57872554-57872573 Msa0650640:intron 25.0%
! GCAAATGGTTCAATTATTAT+GGG + chr4_3:57872555-57872574 Msa0650640:intron 25.0%
!! CTTTTCTACAATTATATGCA+GGG - chr4_3:57872642-57872661 None:intergenic 25.0%
!! ACTTTTCTACAATTATATGC+AGG - chr4_3:57872643-57872662 None:intergenic 25.0%
! AAAATAACAAGTTTAGCAGT+AGG + chr4_3:57872746-57872765 Msa0650640:intron 25.0%
!!! ATATTTTATGTGGTTTTAGG+GGG + chr4_3:57873223-57873242 Msa0650640:intron 25.0%
! GAACCACAAAAAAGAAAAAA+TGG - chr4_3:57873294-57873313 None:intergenic 25.0%
! CTGTATTATTTATGTATGAG+TGG + chr4_3:57873409-57873428 Msa0650640:intron 25.0%
! TATTTATGTATGAGTGGATA+TGG + chr4_3:57873415-57873434 Msa0650640:intron 25.0%
!!! GGTTGAAGATTTTAATAATG+TGG - chr4_3:57873446-57873465 None:intergenic 25.0%
! GAAAATATCTACTGAAATTG+TGG - chr4_3:57873467-57873486 None:intergenic 25.0%
!! TTTCAGTAGATATTTTCTCT+TGG + chr4_3:57873470-57873489 Msa0650640:intron 25.0%
! TCAACTGTGTCAAATATTAT+GGG - chr4_3:57873531-57873550 None:intergenic 25.0%
! TGAATCTATGAATGATGATA+GGG - chr4_3:57873821-57873840 None:intergenic 25.0%
! ATGAATCTATGAATGATGAT+AGG - chr4_3:57873822-57873841 None:intergenic 25.0%
! TTCAAACAACAAAGAAACAA+TGG + chr4_3:57873846-57873865 Msa0650640:intron 25.0%
! AAGAGAACAAAATAAGAGAA+AGG - chr4_3:57874303-57874322 None:intergenic 25.0%
!!! TCTCTTATTTTGTTCTCTTT+TGG + chr4_3:57874304-57874323 Msa0650640:intron 25.0%
!! TTTGTTCGAACTTAGAATTT+TGG + chr4_3:57874394-57874413 Msa0650640:intron 25.0%
! GTTAAGTTAGAAGAGATAAA+GGG + chr4_3:57874416-57874435 Msa0650640:intron 25.0%
! AGGGTATATCATCTAATTAT+TGG + chr4_3:57874435-57874454 Msa0650640:intron 25.0%
! GGGTATATCATCTAATTATT+GGG + chr4_3:57874436-57874455 Msa0650640:intron 25.0%
!! TCAAGTACTTTTGTACAATT+TGG - chr4_3:57875071-57875090 None:intergenic 25.0%
! ATACAATTTCATAAACCTAC+TGG + chr4_3:57875105-57875124 Msa0650640:intron 25.0%
! TACAATTTCATAAACCTACT+GGG + chr4_3:57875106-57875125 Msa0650640:intron 25.0%
! TGTAAAGTCATCCAATATTA+AGG + chr4_3:57875585-57875604 Msa0650640:intron 25.0%
! TGCAAAGAAACATAAACAAA+CGG - chr4_3:57875649-57875668 None:intergenic 25.0%
! ACTCCTCCTAAATAAAAATA+CGG + chr4_3:57875769-57875788 Msa0650640:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG - chr4_3:57876072-57876091 None:intergenic 25.0%
!!! CGTTTTAAAAGTTTTCAAGT+TGG + chr4_3:57875876-57875895 Msa0650640:intron 25.0%
! TTGAAACTTTCAAAACGTAA+GGG - chr4_3:57876072-57876091 None:intergenic 25.0%
! TTGAAACTTTCAAAACGTAA+GGG + chr4_3:57876072-57876091 Msa0650640:intron 25.0%
!!! ATGTTTTGAAAGTTTCAAGT+TGG - chr4_3:57876130-57876149 None:intergenic 25.0%
! CTTGAAACTTTCAAAACATA+AGG + chr4_3:57876131-57876150 Msa0650640:intron 25.0%
! TTAGAATCTAATTGCATGTT+TGG - chr4_3:57876190-57876209 None:intergenic 25.0%
! AGATAAAGAACAAAACACTT+AGG - chr4_3:57876418-57876437 None:intergenic 25.0%
! AATTGAAGTTACCATGTTAT+CGG + chr4_3:57876559-57876578 Msa0650640:intron 25.0%
!!! TAAGTTTTATACCGATAACA+TGG - chr4_3:57876573-57876592 None:intergenic 25.0%
! AAAATGTTATACAGAGAACA+TGG - chr4_3:57876621-57876640 None:intergenic 25.0%
! GATTAATCATTATTAAACGG+TGG - chr4_3:57876646-57876665 None:intergenic 25.0%
! AATCTTTGTTGAGGAATATA+TGG + chr4_3:57876662-57876681 Msa0650640:intron 25.0%
! ATCTTTGTTGAGGAATATAT+GGG + chr4_3:57876663-57876682 Msa0650640:intron 25.0%
! GTACCATTCACATTTATTAA+TGG - chr4_3:57876889-57876908 None:intergenic 25.0%
! CCATATAAACATCTCAAATT+TGG - chr4_3:57876989-57877008 None:intergenic 25.0%
!! CCAAATTTGAGATGTTTATA+TGG + chr4_3:57876986-57877005 Msa0650640:intron 25.0%
! TTGAGATGATCATACAAATA+TGG + chr4_3:57877068-57877087 Msa0650640:intron 25.0%
! TCCACAGAAAAATGAAAATT+GGG + chr4_3:57877113-57877132 Msa0650640:intron 25.0%
!!! TTATAATCTTTGGGTTTTTC+CGG - chr4_3:57877362-57877381 None:intergenic 25.0%
! CTTGATAGGTTATAATCTTT+GGG - chr4_3:57877371-57877390 None:intergenic 25.0%
! AAAGCAAGAATAAAACAACA+AGG + chr4_3:57877404-57877423 Msa0650640:intron 25.0%
! TTGATATTGATCTTTGTCAA+GGG - chr4_3:57877437-57877456 None:intergenic 25.0%
!!! AAAAAAACTTGTTAGTCCAT+TGG + chr4_3:57877566-57877585 Msa0650640:intron 25.0%
!! AATTCTCATATTTTCAGAGA+GGG - chr4_3:57877597-57877616 None:intergenic 25.0%
! AAAATTCTAGTATTGTTGCT+TGG - chr4_3:57877677-57877696 None:intergenic 25.0%
! CAACTCCAATTCTTATTATA+GGG + chr4_3:57877740-57877759 Msa0650640:intron 25.0%
! AGATACCCTATAATAAGAAT+TGG - chr4_3:57877748-57877767 None:intergenic 25.0%
!!! GATAAAGGTGCTAATTATTT+AGG - chr4_3:57877842-57877861 None:intergenic 25.0%
!!! TTTAAGAGTTTTATTTCTCC+AGG - chr4_3:57877995-57878014 None:intergenic 25.0%
! TATGGATATATTCGTTATAC+CGG - chr4_3:57878366-57878385 None:intergenic 25.0%
! TATGGATATATTCGTTATAC+CGG + chr4_3:57878366-57878385 Msa0650640:intron 25.0%
! CAGATAATACATTAACATAG+AGG - chr4_3:57878480-57878499 None:intergenic 25.0%
! ATGTCTTGAAAATGATTTCA+AGG - chr4_3:57878799-57878818 None:intergenic 25.0%
! GAGTACAATATAGAAAACTA+GGG - chr4_3:57878839-57878858 None:intergenic 25.0%
! TGAGTACAATATAGAAAACT+AGG - chr4_3:57878840-57878859 None:intergenic 25.0%
!!! TTGAGGTTTTAAGTAAATCT+TGG - chr4_3:57878964-57878983 None:intergenic 25.0%
! TTCCATTTCTATTATACAGT+TGG - chr4_3:57879011-57879030 None:intergenic 25.0%
! CTTTATATATTCTTCATGCT+TGG + chr4_3:57879078-57879097 Msa0650640:intron 25.0%
! CAAATTATATTCTTAGCCAA+AGG + chr4_3:57879157-57879176 Msa0650640:intron 25.0%
! GTTAGTTAGTACTCTATTTA+AGG - chr4_3:57879218-57879237 None:intergenic 25.0%
! AAATAATGAGTGGTAGTTAA+AGG + chr4_3:57879251-57879270 Msa0650640:intron 25.0%
! CAAACAGTACTATATTTCAA+AGG + chr4_3:57879299-57879318 Msa0650640:intron 25.0%
!!! TGTAGTTGGAGATTTTAATA+CGG - chr4_3:57879383-57879402 None:intergenic 25.0%
! TTGCAAAGAGAAAATATCTA+CGG - chr4_3:57879410-57879429 None:intergenic 25.0%
! GTTATTTATAATATGAGGGA+AGG - chr4_3:57879441-57879460 None:intergenic 25.0%
!! CTTTTAAACAACAAAATCGA+TGG + chr4_3:57879509-57879528 Msa0650640:intron 25.0%
TCACTTGGTAGAAACTTATT+TGG - chr4_3:57871553-57871572 None:intergenic 30.0%
AAATAAGTTTCTACCAAGTG+AGG + chr4_3:57871552-57871571 Msa0650640:CDS 30.0%
AGTTGTAGAGCAAATTGATA+GGG + chr4_3:57871672-57871691 Msa0650640:CDS 30.0%
TAAAGTGGAACCTTACATAT+TGG - chr4_3:57871925-57871944 None:intergenic 30.0%
!! TGTTGATTCAAACTGTAAAG+TGG - chr4_3:57871940-57871959 None:intergenic 30.0%
AACCCACTTTATTAATCCTT+TGG + chr4_3:57872118-57872137 Msa0650640:intron 30.0%
TGCCAAAGGATTAATAAAGT+GGG - chr4_3:57872123-57872142 None:intergenic 30.0%
ATGCCAAAGGATTAATAAAG+TGG - chr4_3:57872124-57872143 None:intergenic 30.0%
TGAGTAAGTAATCTCGAAAA+AGG + chr4_3:57872143-57872162 Msa0650640:intron 30.0%
ACCTAAAAAGTCAACTTTGA+GGG - chr4_3:57872278-57872297 None:intergenic 30.0%
AACCTAAAAAGTCAACTTTG+AGG - chr4_3:57872279-57872298 None:intergenic 30.0%
CCACTTTACATTTATGATAG+TGG - chr4_3:57872419-57872438 None:intergenic 30.0%
CCACTATCATAAATGTAAAG+TGG + chr4_3:57872416-57872435 Msa0650640:intron 30.0%
! ATGAAATGGCTCAGTTATTT+TGG + chr4_3:57872520-57872539 Msa0650640:intron 30.0%
!! TGAAATGGCTCAGTTATTTT+GGG + chr4_3:57872521-57872540 Msa0650640:intron 30.0%
ATGGTTCAATTATTATGGGA+CGG + chr4_3:57872559-57872578 Msa0650640:intron 30.0%
! CAGAGACAAGATGTAATTTT+CGG + chr4_3:57872792-57872811 Msa0650640:intron 30.0%
!! GAGGATATTTTTGTCAATTG+AGG + chr4_3:57872830-57872849 Msa0650640:intron 30.0%
!!! GTTCATGGTCTATTTTTTTG+TGG - chr4_3:57873165-57873184 None:intergenic 30.0%
AAAATGAAATCACGAGTTCA+TGG - chr4_3:57873180-57873199 None:intergenic 30.0%
!!! GGTCCATTTTTTCTTTTTTG+TGG + chr4_3:57873288-57873307 Msa0650640:intron 30.0%
CACTGTTTGTTTATTGATGT+CGG - chr4_3:57873366-57873385 None:intergenic 30.0%
GTCAACTGTGTCAAATATTA+TGG - chr4_3:57873532-57873551 None:intergenic 30.0%
TTCAAATAGGTCATCTATTG+CGG + chr4_3:57873742-57873761 Msa0650640:intron 30.0%
GGAAAAACATAAACAATCAG+AGG - chr4_3:57874244-57874263 None:intergenic 30.0%
GGTTAAGTTAGAAGAGATAA+AGG + chr4_3:57874415-57874434 Msa0650640:intron 30.0%
ACATCTCAGATTATATAAGC+TGG - chr4_3:57874785-57874804 None:intergenic 30.0%
ATAAATATTCTCAGTACTGC+TGG - chr4_3:57874832-57874851 None:intergenic 30.0%
GCATGTGTAAAATATGTGTT+TGG + chr4_3:57874879-57874898 Msa0650640:intron 30.0%
TTGTAAAGTCATCAAAGATG+AGG + chr4_3:57875523-57875542 Msa0650640:intron 30.0%
GCAAAGAAACATAAACAAAC+GGG - chr4_3:57875648-57875667 None:intergenic 30.0%
!! AAGCCGTATTTTTATTTAGG+AGG - chr4_3:57875775-57875794 None:intergenic 30.0%
CTTGAAACTTTCAAAACGTA+AGG - chr4_3:57876071-57876090 None:intergenic 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG + chr4_3:57875846-57875865 Msa0650640:intron 30.0%
CTTGAAACTTTCAAAACGTA+AGG - chr4_3:57876071-57876090 None:intergenic 30.0%
!!! ACGTTTTGAAAGTTTCAAGT+TGG + chr4_3:57875846-57875865 Msa0650640:intron 30.0%
CTTGAAACTTTCAAAACGTA+AGG + chr4_3:57876071-57876090 Msa0650640:intron 30.0%
TAAGTCTAATGACTTAGTTC+TGG + chr4_3:57876591-57876610 Msa0650640:intron 30.0%
! AAGTCTAATGACTTAGTTCT+GGG + chr4_3:57876592-57876611 Msa0650640:intron 30.0%
TCTTTGTTGAGGAATATATG+GGG + chr4_3:57876664-57876683 Msa0650640:intron 30.0%
AAAACAATTGATTGAGAGAG+GGG - chr4_3:57876704-57876723 None:intergenic 30.0%
GAAAACAATTGATTGAGAGA+GGG - chr4_3:57876705-57876724 None:intergenic 30.0%
ACTTATAGACAGAAAACAGT+TGG + chr4_3:57876923-57876942 Msa0650640:intron 30.0%
CTTATAGACAGAAAACAGTT+GGG + chr4_3:57876924-57876943 Msa0650640:intron 30.0%
TTATAGACAGAAAACAGTTG+GGG + chr4_3:57876925-57876944 Msa0650640:intron 30.0%
GTCCACAGAAAAATGAAAAT+TGG + chr4_3:57877112-57877131 Msa0650640:intron 30.0%
!! TCCCAATTTTCATTTTTCTG+TGG - chr4_3:57877117-57877136 None:intergenic 30.0%
! TGAATGTTATTGTTGATAGG+TGG - chr4_3:57877228-57877247 None:intergenic 30.0%
ACCTATCAACAATAACATTC+AGG + chr4_3:57877227-57877246 Msa0650640:intron 30.0%
TCCTGAATGTTATTGTTGAT+AGG - chr4_3:57877231-57877250 None:intergenic 30.0%
!!! TTCCCTTGATTATTTTGGTT+GGG - chr4_3:57877311-57877330 None:intergenic 30.0%
! TTGAGTTCCCTTGATTATTT+TGG - chr4_3:57877316-57877335 None:intergenic 30.0%
TGCCTCATTAAAAATCTTTC+CGG + chr4_3:57877340-57877359 Msa0650640:intron 30.0%
! TTCCGGAAAGATTTTTAATG+AGG - chr4_3:57877345-57877364 None:intergenic 30.0%
CCTTGATAGGTTATAATCTT+TGG - chr4_3:57877372-57877391 None:intergenic 30.0%
CCAAAGATTATAACCTATCA+AGG + chr4_3:57877369-57877388 Msa0650640:intron 30.0%
! TATAGACTTTTCTCCTTGAT+AGG - chr4_3:57877385-57877404 None:intergenic 30.0%
AGAATAAAACAACAAGGAAG+AGG + chr4_3:57877410-57877429 Msa0650640:intron 30.0%
GTTGATATTGATCTTTGTCA+AGG - chr4_3:57877438-57877457 None:intergenic 30.0%
TTCAACAAAATGATTCGACT+TGG - chr4_3:57877534-57877553 None:intergenic 30.0%
! AAGTCGAATCATTTTGTTGA+AGG + chr4_3:57877533-57877552 Msa0650640:intron 30.0%
! ATTCTCATATTTTCAGAGAG+GGG - chr4_3:57877596-57877615 None:intergenic 30.0%
! GAATTCTCATATTTTCAGAG+AGG - chr4_3:57877598-57877617 None:intergenic 30.0%
ATAAGAATTGGAGTTGGATT+TGG - chr4_3:57877736-57877755 None:intergenic 30.0%
CCTATAATAAGAATTGGAGT+TGG - chr4_3:57877742-57877761 None:intergenic 30.0%
CCAACTCCAATTCTTATTAT+AGG + chr4_3:57877739-57877758 Msa0650640:intron 30.0%
! GCAGAGATTTTCATAGATAA+AGG - chr4_3:57877857-57877876 None:intergenic 30.0%
GCTTTAACAATTTCCTAGAT+GGG - chr4_3:57878069-57878088 None:intergenic 30.0%
TGCTTTAACAATTTCCTAGA+TGG - chr4_3:57878070-57878089 None:intergenic 30.0%
TTTCTATGAACGTTCATTGA+TGG - chr4_3:57878130-57878149 None:intergenic 30.0%
TTCATAGAAATATAGCCCTA+AGG + chr4_3:57878140-57878159 Msa0650640:intron 30.0%
TCATAGAAATATAGCCCTAA+GGG + chr4_3:57878141-57878160 Msa0650640:intron 30.0%
AAAAATCACTTTGCCCTTAT+AGG + chr4_3:57878195-57878214 Msa0650640:intron 30.0%
ATTATCTGCAAGTACATTTG+TGG + chr4_3:57878492-57878511 Msa0650640:intron 30.0%
! CGAAATGGTTTAAGTTAAGT+TGG - chr4_3:57878522-57878541 None:intergenic 30.0%
CTTGAAAATGATTTCAAGGT+GGG - chr4_3:57878795-57878814 None:intergenic 30.0%
TCTTGAAAATGATTTCAAGG+TGG - chr4_3:57878796-57878815 None:intergenic 30.0%
ATGACCACTACTTTACATTA+CGG + chr4_3:57878935-57878954 Msa0650640:intron 30.0%
TTAAAACCTCAATCATAGTG+TGG + chr4_3:57878972-57878991 Msa0650640:intron 30.0%
GTCCAACTGTATAATAGAAA+TGG + chr4_3:57879006-57879025 Msa0650640:intron 30.0%
!! GTGATTTAGTGGGTAAATTT+TGG - chr4_3:57879045-57879064 None:intergenic 30.0%
AACAATAATTTAAGGGTTCG+AGG - chr4_3:57879136-57879155 None:intergenic 30.0%
GTATTCCCTACTGTATTATT+TGG + chr4_3:57873399-57873418 Msa0650640:intron 30.0%
!! GTAGTTGGAGATTTTAATAC+GGG - chr4_3:57879382-57879401 None:intergenic 30.0%
ATATCTACGGAAATTGTAGT+TGG - chr4_3:57879397-57879416 None:intergenic 30.0%
! TTTCTACCAAGTGAGGTTTT+GGG + chr4_3:57871559-57871578 Msa0650640:CDS 35.0%
AATCAGCACAAACAACTGTA+GGG + chr4_3:57871602-57871621 Msa0650640:CDS 35.0%
CAGTTGTAGAGCAAATTGAT+AGG + chr4_3:57871671-57871690 Msa0650640:CDS 35.0%
TTATGTTCATTCCAAACCTG+TGG + chr4_3:57871702-57871721 Msa0650640:CDS 35.0%
! GATGGTGTTAAAAAGACTGT+TGG + chr4_3:57871757-57871776 Msa0650640:intron 35.0%
!! GATGATGGATCCAATATGTA+AGG + chr4_3:57871912-57871931 Msa0650640:intron 35.0%
AAACATAAACAAACAGGAGC+AGG - chr4_3:57871964-57871983 None:intergenic 35.0%
AGATTACTTACTCATGCCAA+AGG - chr4_3:57872137-57872156 None:intergenic 35.0%
GTAAGTAATCTCGAAAAAGG+TGG + chr4_3:57872146-57872165 Msa0650640:intron 35.0%
AAGAGTCTAGTGAGTTTAGT+GGG - chr4_3:57872201-57872220 None:intergenic 35.0%
AAAGAGTCTAGTGAGTTTAG+TGG - chr4_3:57872202-57872221 None:intergenic 35.0%
! AAACTCACTAGACTCTTTTG+TGG + chr4_3:57872204-57872223 Msa0650640:intron 35.0%
! AACTCACTAGACTCTTTTGT+GGG + chr4_3:57872205-57872224 Msa0650640:intron 35.0%
!! AAATCCCTAATCGCTTTTGA+GGG - chr4_3:57872247-57872266 None:intergenic 35.0%
!! AAAATCCCTAATCGCTTTTG+AGG - chr4_3:57872248-57872267 None:intergenic 35.0%
! AAAGTCAACTTTGAGGGAAT+AGG - chr4_3:57872272-57872291 None:intergenic 35.0%
!! TCCCTCAAAGTTGACTTTTT+AGG + chr4_3:57872274-57872293 Msa0650640:intron 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr4_3:57872376-57872395 Msa0650640:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr4_3:57872377-57872396 Msa0650640:intron 35.0%
AAATACACAAATACTCCCTC+CGG - chr4_3:57872395-57872414 None:intergenic 35.0%
!!! TGGGACACTTTTTTTGCAAA+TGG + chr4_3:57872540-57872559 Msa0650640:intron 35.0%
TTCAATTATTATGGGACGGA+AGG + chr4_3:57872563-57872582 Msa0650640:intron 35.0%
TCTACAATTATATGCAGGGA+CGG - chr4_3:57872638-57872657 None:intergenic 35.0%
ATAACTCGTGATAGATGCAA+GGG - chr4_3:57872706-57872725 None:intergenic 35.0%
AATAACTCGTGATAGATGCA+AGG - chr4_3:57872707-57872726 None:intergenic 35.0%
ATAACAAGTTTAGCAGTAGG+TGG + chr4_3:57872749-57872768 Msa0650640:intron 35.0%
ATCTTGTCTCTGGTCATTAT+CGG - chr4_3:57872784-57872803 None:intergenic 35.0%
CGAAAATTACATCTTGTCTC+TGG - chr4_3:57872794-57872813 None:intergenic 35.0%
ATAATACAGTAGGGAATACG+TGG - chr4_3:57873398-57873417 None:intergenic 35.0%
CTGTGTCAAATATTATGGGA+CGG - chr4_3:57873527-57873546 None:intergenic 35.0%
TCAAATAGGTCATCTATTGC+GGG + chr4_3:57873743-57873762 Msa0650640:intron 35.0%
AAAGAAACAATGGCATCAAC+TGG + chr4_3:57873856-57873875 Msa0650640:intron 35.0%
!!! TGGACCCAATAACGATTTTT+TGG + chr4_3:57873876-57873895 Msa0650640:intron 35.0%
CCTGCCAAAAAATCGTTATT+GGG - chr4_3:57873883-57873902 None:intergenic 35.0%
ACCTGCCAAAAAATCGTTAT+TGG - chr4_3:57873884-57873903 None:intergenic 35.0%
!! GGTAATGGATCCAATATGTA+AGG + chr4_3:57874184-57874203 Msa0650640:intron 35.0%
AGCTCTGTTACCTTACATAT+TGG - chr4_3:57874197-57874216 None:intergenic 35.0%
AAACATAAACAATCAGAGGC+AGG - chr4_3:57874240-57874259 None:intergenic 35.0%
!! CGACGCACAATAAGTTTTAA+AGG + chr4_3:57874545-57874564 Msa0650640:intron 35.0%
AACAAAGTGGACGAAAAAGA+AGG - chr4_3:57874604-57874623 None:intergenic 35.0%
GTTATGTCTGTGATGCAATT+TGG - chr4_3:57874915-57874934 None:intergenic 35.0%
TTTGTAGCTGATCATTGTAG+AGG - chr4_3:57875187-57875206 None:intergenic 35.0%
! TGTATGTGTTGCTAAGACAT+GGG - chr4_3:57875374-57875393 None:intergenic 35.0%
! TTGTATGTGTTGCTAAGACA+TGG - chr4_3:57875375-57875394 None:intergenic 35.0%
AAACAACACATGGTTACATG+AGG - chr4_3:57875419-57875438 None:intergenic 35.0%
CAACACATGATCAAGAAACT+CGG + chr4_3:57875479-57875498 Msa0650640:intron 35.0%
GAGCTCTGTTACCTTAATAT+TGG - chr4_3:57875599-57875618 None:intergenic 35.0%
ATACGGCTTAATTGCATGTT+TGG + chr4_3:57875786-57875805 Msa0650640:intron 35.0%
GGAAAACAATTGATTGAGAG+AGG - chr4_3:57876706-57876725 None:intergenic 35.0%
TATAGACAGAAAACAGTTGG+GGG + chr4_3:57876926-57876945 Msa0650640:intron 35.0%
! TAAAGATTTCCGGCAAGTTT+TGG - chr4_3:57876953-57876972 None:intergenic 35.0%
! TTTGTCCCTCTAAAGATTTC+CGG - chr4_3:57876963-57876982 None:intergenic 35.0%
!! TTTTTCTGTGGACTATGTTG+AGG - chr4_3:57877105-57877124 None:intergenic 35.0%
CCAACATAGTTGAGATATCT+TGG - chr4_3:57877192-57877211 None:intergenic 35.0%
CCAAGATATCTCAACTATGT+TGG + chr4_3:57877189-57877208 Msa0650640:intron 35.0%
!! ATGAAAGATTCAAAGGCACT+TGG + chr4_3:57877268-57877287 Msa0650640:intron 35.0%
!!! GATTATTTTGGTTGGGGTTT+TGG - chr4_3:57877304-57877323 None:intergenic 35.0%
AACCCCAACCAAAATAATCA+AGG + chr4_3:57877305-57877324 Msa0650640:intron 35.0%
ACCCCAACCAAAATAATCAA+GGG + chr4_3:57877306-57877325 Msa0650640:intron 35.0%
!!! TCCCTTGATTATTTTGGTTG+GGG - chr4_3:57877310-57877329 None:intergenic 35.0%
!!! GTTCCCTTGATTATTTTGGT+TGG - chr4_3:57877312-57877331 None:intergenic 35.0%
!! ACAAAATGATTCGACTTGGA+TGG - chr4_3:57877530-57877549 None:intergenic 35.0%
GGTTATGTTAAGAGATGTCT+AGG - chr4_3:57877893-57877912 None:intergenic 35.0%
ACACTTGACCCAATTAAAGA+TGG + chr4_3:57877922-57877941 Msa0650640:intron 35.0%
CATAGAAATATAGCCCTAAG+GGG + chr4_3:57878142-57878161 Msa0650640:intron 35.0%
TACATATCCCTAAAGGTCTT+AGG - chr4_3:57878284-57878303 None:intergenic 35.0%
! TAAGACCTTTAGGGATATGT+AGG + chr4_3:57878283-57878302 Msa0650640:intron 35.0%
TAAGACCTACATATCCCTAA+AGG - chr4_3:57878291-57878310 None:intergenic 35.0%
ACTCGAGTAATGAGATCTAT+GGG - chr4_3:57878324-57878343 None:intergenic 35.0%
AGATACGAGAAAGACAGTTT+CGG - chr4_3:57878663-57878682 None:intergenic 35.0%
AAACTGTCTTTCTCGTATCT+TGG + chr4_3:57878663-57878682 Msa0650640:intron 35.0%
AACTGTCTTTCTCGTATCTT+GGG + chr4_3:57878664-57878683 Msa0650640:intron 35.0%
AACTAGGGTTCGATCTATTT+AGG - chr4_3:57878824-57878843 None:intergenic 35.0%
TAACATCCACACTATGATTG+AGG - chr4_3:57878981-57879000 None:intergenic 35.0%
AATCATAGTGTGGATGTTAC+TGG + chr4_3:57878982-57879001 Msa0650640:intron 35.0%
TGAGTGGTAGTTAAAGGAAT+TGG + chr4_3:57879257-57879276 Msa0650640:intron 35.0%
GAGTGGTAGTTAAAGGAATT+GGG + chr4_3:57879258-57879277 Msa0650640:intron 35.0%
AGTGGTAGTTAAAGGAATTG+GGG + chr4_3:57879259-57879278 Msa0650640:intron 35.0%
GTACTGTTTGCTTCTTATGT+CGG - chr4_3:57879289-57879308 None:intergenic 35.0%
ATAATACAGTAGGGAATACG+TGG - chr4_3:57873398-57873417 None:intergenic 35.0%
TAAACAACAAAATCGATGGC+TGG + chr4_3:57879513-57879532 Msa0650640:intron 35.0%
! TTTTACATAATCAGCAGCCA+TGG - chr4_3:57879676-57879695 None:intergenic 35.0%
! GTTTCTACCAAGTGAGGTTT+TGG + chr4_3:57871558-57871577 Msa0650640:CDS 40.0%
! TTCTACCAAGTGAGGTTTTG+GGG + chr4_3:57871560-57871579 Msa0650640:CDS 40.0%
GAATCAGCACAAACAACTGT+AGG + chr4_3:57871601-57871620 Msa0650640:CDS 40.0%
CAAACAACTGTAGGGAAACA+AGG + chr4_3:57871610-57871629 Msa0650640:CDS 40.0%
GGTGTTAAAAAGACTGTTGG+AGG + chr4_3:57871760-57871779 Msa0650640:intron 40.0%
AGTTACCACATGTCTGATGA+TGG + chr4_3:57871897-57871916 Msa0650640:intron 40.0%
TCTCGAAAAAGGTGGCTTAT+AGG + chr4_3:57872154-57872173 Msa0650640:intron 40.0%
AAAACCCCTCAAAAGCGATT+AGG + chr4_3:57872239-57872258 Msa0650640:intron 40.0%
AAACCCCTCAAAAGCGATTA+GGG + chr4_3:57872240-57872259 Msa0650640:intron 40.0%
!! AATCCCTAATCGCTTTTGAG+GGG - chr4_3:57872246-57872265 None:intergenic 40.0%
ATCCAGACTTTAGGTACATG+TGG - chr4_3:57872615-57872634 None:intergenic 40.0%
TCTTGTCTCTGGTCATTATC+GGG - chr4_3:57872783-57872802 None:intergenic 40.0%
TCGGTCGAAACAGAAAATTG+AGG + chr4_3:57872811-57872830 Msa0650640:intron 40.0%
AAACACGTGAGACAATGTCA+CGG - chr4_3:57873316-57873335 None:intergenic 40.0%
GTCAAATATTATGGGACGGA+AGG - chr4_3:57873523-57873542 None:intergenic 40.0%
!!! CCCAATAACGATTTTTTGGC+AGG + chr4_3:57873880-57873899 Msa0650640:intron 40.0%
GCTTCAGCACAAACAACTAT+AGG + chr4_3:57873919-57873938 Msa0650640:CDS 40.0%
GTGTATAAGTTAGCACTGTC+TGG + chr4_3:57874163-57874182 Msa0650640:intron 40.0%
AAGTTAGCACTGTCTGGTAA+TGG + chr4_3:57874169-57874188 Msa0650640:intron 40.0%
GACCTGAGCCTACAAATTAT+AGG + chr4_3:57874496-57874515 Msa0650640:intron 40.0%
! GTGCTAGGCCTATAATTTGT+AGG - chr4_3:57874507-57874526 None:intergenic 40.0%
TTCTCAGTACTGCTGGAAAA+TGG - chr4_3:57874825-57874844 None:intergenic 40.0%
GCAACTGGGTTACTAATTAG+TGG - chr4_3:57875242-57875261 None:intergenic 40.0%
GCATCAAGACATTAGCAACT+GGG - chr4_3:57875256-57875275 None:intergenic 40.0%
TGCATCAAGACATTAGCAAC+TGG - chr4_3:57875257-57875276 None:intergenic 40.0%
! CGTTTGACCAAGTCTAGAAT+CGG + chr4_3:57875284-57875303 Msa0650640:intron 40.0%
! GTTTGACCAAGTCTAGAATC+GGG + chr4_3:57875285-57875304 Msa0650640:intron 40.0%
AGATTTCGATTGAAGAGGTG+GGG - chr4_3:57875313-57875332 None:intergenic 40.0%
GAGATTTCGATTGAAGAGGT+GGG - chr4_3:57875314-57875333 None:intergenic 40.0%
AGAGATTTCGATTGAAGAGG+TGG - chr4_3:57875315-57875334 None:intergenic 40.0%
TGCAGAGATTTCGATTGAAG+AGG - chr4_3:57875318-57875337 None:intergenic 40.0%
! ACTTAGGAGATAGGGTGTTT+CGG - chr4_3:57875449-57875468 None:intergenic 40.0%
CGAGTTTCTTGATCATGTGT+TGG - chr4_3:57875481-57875500 None:intergenic 40.0%
ATGATCAAGAAACTCGGCAT+AGG + chr4_3:57875485-57875504 Msa0650640:intron 40.0%
CTTTACAACAGATGTCTCTG+AGG - chr4_3:57875511-57875530 None:intergenic 40.0%
AAAGATGAGGCAGATATGAC+TGG + chr4_3:57875536-57875555 Msa0650640:intron 40.0%
AGAAACATAAACAAACGGGC+AGG - chr4_3:57875644-57875663 None:intergenic 40.0%
TCAAGTCGGTCCAAAACATA+AGG + chr4_3:57875980-57875999 Msa0650640:intron 40.0%
CAAGTCGGTCCAAAACATAA+GGG + chr4_3:57875981-57876000 Msa0650640:intron 40.0%
!!! CAAGTTGGTCCCTTATGTTT+TGG - chr4_3:57875950-57875969 None:intergenic 40.0%
AATATATGGGGCACGCAAAT+TGG + chr4_3:57876676-57876695 Msa0650640:intron 40.0%
! TTGTTTTCGACTCTTGCGTA+CGG - chr4_3:57876727-57876746 None:intergenic 40.0%
AACTTGCCGGAAATCTTTAG+AGG + chr4_3:57876954-57876973 Msa0650640:intron 40.0%
ACTTGCCGGAAATCTTTAGA+GGG + chr4_3:57876955-57876974 Msa0650640:intron 40.0%
CCTTTCAAGATGAGCTCTAT+GGG - chr4_3:57877787-57877806 None:intergenic 40.0%
GAAAATCTCTGCACAAGTTG+TGG + chr4_3:57877865-57877884 Msa0650640:intron 40.0%
TGGGTCAAGTGTCATATTGA+TGG - chr4_3:57877914-57877933 None:intergenic 40.0%
CTTGACCCAATTAAAGATGG+AGG + chr4_3:57877925-57877944 Msa0650640:intron 40.0%
GGCATCCTCCATCTTTAATT+GGG - chr4_3:57877933-57877952 None:intergenic 40.0%
TGGCATCCTCCATCTTTAAT+TGG - chr4_3:57877934-57877953 None:intergenic 40.0%
TGATTCTCCTTGTATCAAGG+AGG - chr4_3:57877962-57877981 None:intergenic 40.0%
TCCTTGATACAAGGAGAATC+AGG + chr4_3:57877961-57877980 Msa0650640:intron 40.0%
TCTTAGTATGTCTCCCATCT+AGG + chr4_3:57878053-57878072 Msa0650640:intron 40.0%
ATAGTGAGCTTCATCTGACT+TGG - chr4_3:57878171-57878190 None:intergenic 40.0%
! GCAAGCTTATCGCCTTTTTA+TGG - chr4_3:57878262-57878281 None:intergenic 40.0%
TAAGCTTGCCTAAGACCTTT+AGG + chr4_3:57878273-57878292 Msa0650640:intron 40.0%
AAGCTTGCCTAAGACCTTTA+GGG + chr4_3:57878274-57878293 Msa0650640:intron 40.0%
CACTCGAGTAATGAGATCTA+TGG - chr4_3:57878325-57878344 None:intergenic 40.0%
AGATCTCATTACTCGAGTGA+AGG + chr4_3:57878326-57878345 Msa0650640:intron 40.0%
!!! AGAGCTACGTAGTTTTGTAC+CGG - chr4_3:57878388-57878407 None:intergenic 40.0%
TCTGATTCCCTAAGACCTTT+CGG + chr4_3:57878405-57878424 Msa0650640:intron 40.0%
ACATATCCCGAAAGGTCTTA+GGG - chr4_3:57878415-57878434 None:intergenic 40.0%
TACATATCCCGAAAGGTCTT+AGG - chr4_3:57878416-57878435 None:intergenic 40.0%
TAAGACCTTTCGGGATATGT+AGG + chr4_3:57878415-57878434 Msa0650640:intron 40.0%
ATTTAGATGTGAGCTCGACA+AGG - chr4_3:57878452-57878471 None:intergenic 40.0%
AGTCTTGAAACAAGGCGAAA+TGG - chr4_3:57878537-57878556 None:intergenic 40.0%
TTGTTTCAAGACTCGTGCTT+GGG + chr4_3:57878544-57878563 Msa0650640:intron 40.0%
! AGCCCTCTAGAAAGGTTTAT+TGG + chr4_3:57878604-57878623 Msa0650640:intron 40.0%
GGCCAATAAACCTTTCTAGA+GGG - chr4_3:57878609-57878628 None:intergenic 40.0%
AGTTTCGGAGCTAAAAGCAA+GGG - chr4_3:57878648-57878667 None:intergenic 40.0%
ACTGTCTTTCTCGTATCTTG+GGG + chr4_3:57878665-57878684 Msa0650640:intron 40.0%
! CTGGGGGTTTAAGTTACTTA+CGG + chr4_3:57878729-57878748 Msa0650640:intron 40.0%
AAGTTACTTACGGCCTAAGT+CGG + chr4_3:57878739-57878758 Msa0650640:intron 40.0%
AGCTTATGATTTCCCGACTT+AGG - chr4_3:57878755-57878774 None:intergenic 40.0%
GGGAAATCATAAGCTCAAGA+GGG + chr4_3:57878760-57878779 Msa0650640:intron 40.0%
ACCACTACTTTACATTACGG+TGG + chr4_3:57878938-57878957 Msa0650640:intron 40.0%
GTCATTGAATGAGATGCCTT+TGG - chr4_3:57879176-57879195 None:intergenic 40.0%
GCACTTGCCAAAATATCGTT+AGG - chr4_3:57879540-57879559 None:intergenic 40.0%
!!! CGATATTTTGGCAAGTGCAA+AGG + chr4_3:57879542-57879561 Msa0650640:intron 40.0%
! AGCATTTCCCACAGTTTTCT+GGG - chr4_3:57879616-57879635 None:intergenic 40.0%
AAACCCAAACCAGATCCTAT+TGG + chr4_3:57879693-57879712 Msa0650640:CDS 40.0%
! TTGCCAATAGGATCTGGTTT+GGG - chr4_3:57879699-57879718 None:intergenic 40.0%
TTTGCCAATAGGATCTGGTT+TGG - chr4_3:57879700-57879719 None:intergenic 40.0%
!!! TTGGTTTTGCCAATAGGATC+TGG - chr4_3:57879705-57879724 None:intergenic 40.0%
GATCCTATTGGCAAAACCAA+AGG + chr4_3:57879705-57879724 Msa0650640:CDS 40.0%
TATTGGCAAAACCAAAGGTG+CGG + chr4_3:57879710-57879729 Msa0650640:CDS 40.0%
! AAAACCAAAGGTGCGGTTAA+TGG + chr4_3:57879717-57879736 Msa0650640:CDS 40.0%
!! AATGGTGCTACAAAGTCTGT+TGG + chr4_3:57879735-57879754 Msa0650640:CDS 40.0%
TGTAGGGAAACAAGGTGAGA+AGG + chr4_3:57871618-57871637 Msa0650640:CDS 45.0%
ATCAAGCACACCTGCTTCTT+CGG - chr4_3:57871740-57871759 None:intergenic 45.0%
TGGATCCATCATCAGACATG+TGG - chr4_3:57871905-57871924 None:intergenic 45.0%
!! TCGCTTTTGAGGGGTTTTGA+GGG - chr4_3:57872237-57872256 None:intergenic 45.0%
!! ATCGCTTTTGAGGGGTTTTG+AGG - chr4_3:57872238-57872257 None:intergenic 45.0%
CTCCACATGTACCTAAAGTC+TGG + chr4_3:57872610-57872629 Msa0650640:intron 45.0%
!! TGTCTCACGTGTTTCTAGCA+TGG + chr4_3:57873322-57873341 Msa0650640:intron 45.0%
!! GTCTCACGTGTTTCTAGCAT+GGG + chr4_3:57873323-57873342 Msa0650640:intron 45.0%
TATTATGGGACGGAAGGAGA+AGG - chr4_3:57873517-57873536 None:intergenic 45.0%
!!! CGATTTTTTGGCAGGTGCAA+AGG + chr4_3:57873888-57873907 Msa0650640:intron 45.0%
GCTAATGTTCAGAAGACCGT+AGG + chr4_3:57873952-57873971 Msa0650640:CDS 45.0%
! CTTGGTAGCATACTCTCCTA+CGG - chr4_3:57873971-57873990 None:intergenic 45.0%
! GGTGGTGCTAAAAATGCTGT+TGG + chr4_3:57874048-57874067 Msa0650640:CDS 45.0%
! GGCCTATAATTTGTAGGCTC+AGG - chr4_3:57874501-57874520 None:intergenic 45.0%
AATTATAGGCCTAGCACCCT+TGG + chr4_3:57874510-57874529 Msa0650640:intron 45.0%
!! TGCTGGAAAATGGTGTCATG+GGG - chr4_3:57874815-57874834 None:intergenic 45.0%
!! CTGCTGGAAAATGGTGTCAT+GGG - chr4_3:57874816-57874835 None:intergenic 45.0%
! ACTGCTGGAAAATGGTGTCA+TGG - chr4_3:57874817-57874836 None:intergenic 45.0%
! TTGTACCGATGGAGGATGAA+GGG - chr4_3:57875150-57875169 None:intergenic 45.0%
AGTGAGGAATGTTGTACCGA+TGG - chr4_3:57875161-57875180 None:intergenic 45.0%
ATCATTGTAGAGGCTCAGTG+AGG - chr4_3:57875177-57875196 None:intergenic 45.0%
GTTACTAATTAGTGGCCACG+AGG - chr4_3:57875234-57875253 None:intergenic 45.0%
GTTACATGAGGTGGTATACG+AGG - chr4_3:57875407-57875426 None:intergenic 45.0%
CAACACATGGTTACATGAGG+TGG - chr4_3:57875416-57875435 None:intergenic 45.0%
! TTAGGAGATAGGGTGTTTCG+GGG - chr4_3:57875447-57875466 None:intergenic 45.0%
! CTTAGGAGATAGGGTGTTTC+GGG - chr4_3:57875448-57875467 None:intergenic 45.0%
CACAGAGGACTTAGGAGATA+GGG - chr4_3:57875457-57875476 None:intergenic 45.0%
TCACAGAGGACTTAGGAGAT+AGG - chr4_3:57875458-57875477 None:intergenic 45.0%
! TGATCATGTGTTGGTCACAG+AGG - chr4_3:57875472-57875491 None:intergenic 45.0%
GCAGATATGACTGGATGCTT+GGG + chr4_3:57875545-57875564 Msa0650640:intron 45.0%
TATGACTGGATGCTTGGGAA+TGG + chr4_3:57875550-57875569 Msa0650640:intron 45.0%
TCAACTATGTTGGCATCCCT+TGG + chr4_3:57877199-57877218 Msa0650640:intron 45.0%
! TGTTGATAGGTGGTGACCAA+GGG - chr4_3:57877218-57877237 None:intergenic 45.0%
! TTGTTGATAGGTGGTGACCA+AGG - chr4_3:57877219-57877238 None:intergenic 45.0%
TTCAGAGAGGGGAAAACCAA+TGG - chr4_3:57877585-57877604 None:intergenic 45.0%
! GTATTGTTGCTTGGCACATG+AGG - chr4_3:57877668-57877687 None:intergenic 45.0%
CCCATAGAGCTCATCTTGAA+AGG + chr4_3:57877784-57877803 Msa0650640:intron 45.0%
GCCTTTCAAGATGAGCTCTA+TGG - chr4_3:57877788-57877807 None:intergenic 45.0%
!! CTTGTATCAAGGAGGTGTTG+TGG - chr4_3:57877954-57877973 None:intergenic 45.0%
CACAACACCTCCTTGATACA+AGG + chr4_3:57877952-57877971 Msa0650640:intron 45.0%
GCCTGATTCTCCTTGTATCA+AGG - chr4_3:57877965-57877984 None:intergenic 45.0%
! GCAAGCTTATCGCCCTTTTA+TGG + chr4_3:57878348-57878367 Msa0650640:intron 45.0%
CTGATTCCCTAAGACCTTTC+GGG + chr4_3:57878406-57878425 Msa0650640:intron 45.0%
CAAGCACGAGTCTTGAAACA+AGG - chr4_3:57878545-57878564 None:intergenic 45.0%
CTTGTTTCAAGACTCGTGCT+TGG + chr4_3:57878543-57878562 Msa0650640:intron 45.0%
TGTTTCAAGACTCGTGCTTG+GGG + chr4_3:57878545-57878564 Msa0650640:intron 45.0%
GGGCCAATAAACCTTTCTAG+AGG - chr4_3:57878610-57878629 None:intergenic 45.0%
AGGTTTATTGGCCCTCTGTT+AGG + chr4_3:57878616-57878635 Msa0650640:intron 45.0%
GGTTTATTGGCCCTCTGTTA+GGG + chr4_3:57878617-57878636 Msa0650640:intron 45.0%
GTTTCGGAGCTAAAAGCAAG+GGG - chr4_3:57878647-57878666 None:intergenic 45.0%
CAGTTTCGGAGCTAAAAGCA+AGG - chr4_3:57878649-57878668 None:intergenic 45.0%
AGTAACTTAAACCCCCAGTC+AGG - chr4_3:57878727-57878746 None:intergenic 45.0%
AGTTACTTACGGCCTAAGTC+GGG + chr4_3:57878740-57878759 Msa0650640:intron 45.0%
CGGGAAATCATAAGCTCAAG+AGG + chr4_3:57878759-57878778 Msa0650640:intron 45.0%
GCCACCGTAATGTAAAGTAG+TGG - chr4_3:57878942-57878961 None:intergenic 45.0%
AAGGGTTCGAGGTTTCAACA+TGG - chr4_3:57879125-57879144 None:intergenic 45.0%
! GGCTGGACCTAACGATATTT+TGG + chr4_3:57879530-57879549 Msa0650640:intron 45.0%
GCTTCAGCACAGAAAACTGT+AGG + chr4_3:57879573-57879592 Msa0650640:CDS 45.0%
! CAGCATTTCCCACAGTTTTC+TGG - chr4_3:57879617-57879636 None:intergenic 45.0%
GCTGGTGTTCATAAGACTGT+AGG + chr4_3:57879639-57879658 Msa0650640:CDS 45.0%
TGTAGGAGACTATGCTACCA+TGG + chr4_3:57879656-57879675 Msa0650640:CDS 45.0%
!!! GCACCTTTGGTTTTGCCAAT+AGG - chr4_3:57879711-57879730 None:intergenic 45.0%
!!! TAATTTTATTTTTTTTTTGA+AGG - chr4_3:57872994-57873013 None:intergenic 5.0%
!!! TTTTAGTTAATATTTAAATT+TGG + chr4_3:57876389-57876408 Msa0650640:intron 5.0%
!! TTTAGTTAATATTTAAATTT+GGG + chr4_3:57876390-57876409 Msa0650640:intron 5.0%
!!! TTTTTTATTTCTATTTAATT+TGG + chr4_3:57876438-57876457 Msa0650640:intron 5.0%
!!! TGAGGTTTTGGGGAGTGCAA+AGG + chr4_3:57871570-57871589 Msa0650640:CDS 50.0%
GAAGGTTGCAACTTCTGCAG+AGG + chr4_3:57871636-57871655 Msa0650640:CDS 50.0%
! CACACCTGCTTCTTCGGTTT+TGG - chr4_3:57871734-57871753 None:intergenic 50.0%
GAAGAAGCAGGTGTGCTTGA+TGG + chr4_3:57871739-57871758 Msa0650640:CDS 50.0%
!!! CGCTTTTGAGGGGTTTTGAG+GGG - chr4_3:57872236-57872255 None:intergenic 50.0%
!! ACGTGTTTCTAGCATGGGAC+AGG + chr4_3:57873328-57873347 Msa0650640:intron 50.0%
TCTAGCATGGGACAGGAACA+AGG + chr4_3:57873335-57873354 Msa0650640:intron 50.0%
CTAGCATGGGACAGGAACAA+GGG + chr4_3:57873336-57873355 Msa0650640:intron 50.0%
! CGTAGGAGAGTATGCTACCA+AGG + chr4_3:57873969-57873988 Msa0650640:CDS 50.0%
CTGGACAAAATCAGCAGCCT+TGG - chr4_3:57873989-57874008 None:intergenic 50.0%
! TTTGGCTGGCTCTTCTGGTT+TGG - chr4_3:57874013-57874032 None:intergenic 50.0%
! ACCAATCACACCTTCGGGTT+TGG - chr4_3:57874031-57874050 None:intergenic 50.0%
! AAACCCGAAGGTGTGATTGG+TGG + chr4_3:57874030-57874049 Msa0650640:CDS 50.0%
AGCACCACCAATCACACCTT+CGG - chr4_3:57874037-57874056 None:intergenic 50.0%
AGGCTCAGGTCACTCACTTA+TGG - chr4_3:57874487-57874506 None:intergenic 50.0%
!! TTTCCCACCTTTGAAGCCTC+CGG + chr4_3:57874574-57874593 Msa0650640:intron 50.0%
!! GCTGGAAAATGGTGTCATGG+GGG - chr4_3:57874814-57874833 None:intergenic 50.0%
TAGAGGTCGTGTTACCCAGT+AGG - chr4_3:57875123-57875142 None:intergenic 50.0%
! TGTACCGATGGAGGATGAAG+GGG - chr4_3:57875149-57875168 None:intergenic 50.0%
! GTTGTACCGATGGAGGATGA+AGG - chr4_3:57875151-57875170 None:intergenic 50.0%
! GAGGAATGTTGTACCGATGG+AGG - chr4_3:57875158-57875177 None:intergenic 50.0%
GCAAGGGGTTCAATTCGGAA+AGG - chr4_3:57875210-57875229 None:intergenic 50.0%
GAGGAGCAAGGGGTTCAATT+CGG - chr4_3:57875215-57875234 None:intergenic 50.0%
! TAGGAGATAGGGTGTTTCGG+GGG - chr4_3:57875446-57875465 None:intergenic 50.0%
! GTGTTGGTCACAGAGGACTT+AGG - chr4_3:57875465-57875484 None:intergenic 50.0%
GGCAGATATGACTGGATGCT+TGG + chr4_3:57875544-57875563 Msa0650640:intron 50.0%
AACGGGCAGGATCACTAAAG+TGG - chr4_3:57875631-57875650 None:intergenic 50.0%
!! TCTGACTTGGTCTCCCCTTA+GGG - chr4_3:57878158-57878177 None:intergenic 50.0%
!! ATCTGACTTGGTCTCCCCTT+AGG - chr4_3:57878159-57878178 None:intergenic 50.0%
CTGGTCCTACATATCCCGAA+AGG - chr4_3:57878423-57878442 None:intergenic 50.0%
GAGCTCGACAAGGATTTCTC+TGG - chr4_3:57878442-57878461 None:intergenic 50.0%
GTTTCAAGACTCGTGCTTGG+GGG + chr4_3:57878546-57878565 Msa0650640:intron 50.0%
! GGCTTACTAGCCCTCTAGAA+AGG + chr4_3:57878596-57878615 Msa0650640:intron 50.0%
ACTGTAGGAAATGCTGCAGC+TGG + chr4_3:57879588-57879607 Msa0650640:CDS 50.0%
AGCACCATTAACCGCACCTT+TGG - chr4_3:57879724-57879743 None:intergenic 50.0%
! GGTGCTACAAAGTCTGTTGG+AGG + chr4_3:57879738-57879757 Msa0650640:CDS 50.0%
GCACTCCCCAAAACCTCACT+TGG - chr4_3:57871568-57871587 None:intergenic 55.0%
!!! GGTTTTGGGGAGTGCAAAGG+TGG + chr4_3:57871573-57871592 Msa0650640:CDS 55.0%
TTTGGCAGGCTCCACAGGTT+TGG - chr4_3:57871716-57871735 None:intergenic 55.0%
!! CCTGCTTCTTCGGTTTTGGC+AGG - chr4_3:57871730-57871749 None:intergenic 55.0%
CCTGCCAAAACCGAAGAAGC+AGG + chr4_3:57871727-57871746 Msa0650640:CDS 55.0%
CAGGGACGGATCCAGACTTT+AGG - chr4_3:57872624-57872643 None:intergenic 55.0%
ATGGGACGGAAGGAGAAGGA+GGG - chr4_3:57873513-57873532 None:intergenic 55.0%
TATGGGACGGAAGGAGAAGG+AGG - chr4_3:57873514-57873533 None:intergenic 55.0%
!! CTGGCTCTTCTGGTTTGGAC+TGG - chr4_3:57874008-57874027 None:intergenic 55.0%
! ATCACACCTTCGGGTTTGGC+TGG - chr4_3:57874027-57874046 None:intergenic 55.0%
! GCCAAACCCGAAGGTGTGAT+TGG + chr4_3:57874027-57874046 Msa0650640:CDS 55.0%
GCACCACCAATCACACCTTC+GGG - chr4_3:57874036-57874055 None:intergenic 55.0%
ATAGGCCTAGCACCCTTGGA+TGG + chr4_3:57874514-57874533 Msa0650640:intron 55.0%
!! TCTAGCCATCCAAGGGTGCT+AGG - chr4_3:57874522-57874541 None:intergenic 55.0%
! GTCGAGCTCTAGCCATCCAA+GGG - chr4_3:57874529-57874548 None:intergenic 55.0%
AGCACCCCTTCATCCTCCAT+CGG + chr4_3:57875142-57875161 Msa0650640:intron 55.0%
ATTGAACCCCTTGCTCCTCG+TGG + chr4_3:57875216-57875235 Msa0650640:intron 55.0%
TTAGTGGCCACGAGGAGCAA+GGG - chr4_3:57875226-57875245 None:intergenic 55.0%
ATTAGTGGCCACGAGGAGCA+AGG - chr4_3:57875227-57875246 None:intergenic 55.0%
GGGGAACCCGATTCTAGACT+TGG - chr4_3:57875294-57875313 None:intergenic 55.0%
! CCTTCTCCTCAGCTAGCCTA+GGG + chr4_3:57875342-57875361 Msa0650640:intron 55.0%
! CTTCTCCTCAGCTAGCCTAG+GGG + chr4_3:57875343-57875362 Msa0650640:intron 55.0%
AAGACATGGGTGAGACCCCT+AGG - chr4_3:57875361-57875380 None:intergenic 55.0%
! AGATAGGGTGTTTCGGGGGT+GGG - chr4_3:57875442-57875461 None:intergenic 55.0%
GTTGGGGGACCAAAACTTGC+CGG + chr4_3:57876941-57876960 Msa0650640:intron 55.0%
GAGAATCAGGCGCATGAACC+TGG + chr4_3:57877974-57877993 Msa0650640:intron 55.0%
CCCAAGCACGAGGCCTATAA+GGG - chr4_3:57878211-57878230 None:intergenic 55.0%
CCCTTATAGGCCTCGTGCTT+GGG + chr4_3:57878208-57878227 Msa0650640:intron 55.0%
TCCCAAGCACGAGGCCTATA+AGG - chr4_3:57878212-57878231 None:intergenic 55.0%
TTATAGGCCTCGTGCTTGGG+AGG + chr4_3:57878211-57878230 Msa0650640:intron 55.0%
TAGCACGCGCATTTCCTGAC+TGG + chr4_3:57878710-57878729 Msa0650640:intron 55.0%
AGCACGCGCATTTCCTGACT+GGG + chr4_3:57878711-57878730 Msa0650640:intron 55.0%
AGCTGGTGCCCAGAAAACTG+TGG + chr4_3:57879605-57879624 Msa0650640:CDS 55.0%
GCTGGTGCCCAGAAAACTGT+GGG + chr4_3:57879606-57879625 Msa0650640:CDS 55.0%
ACTGTGGGAAATGCTGCAGC+TGG + chr4_3:57879621-57879640 Msa0650640:CDS 55.0%
!! TCGGTTTTGGCAGGCTCCAC+AGG - chr4_3:57871721-57871740 None:intergenic 60.0%
ACGGAAGGAGAAGGAGGGGA+GGG - chr4_3:57873508-57873527 None:intergenic 60.0%
TGGGACGGAAGGAGAAGGAG+GGG - chr4_3:57873512-57873531 None:intergenic 60.0%
! TCGGGTTTGGCTGGCTCTTC+TGG - chr4_3:57874018-57874037 None:intergenic 60.0%
GAAGAGCCAGCCAAACCCGA+AGG + chr4_3:57874018-57874037 Msa0650640:CDS 60.0%
! CGTCGAGCTCTAGCCATCCA+AGG - chr4_3:57874530-57874549 None:intergenic 60.0%
GGACGAAAAAGAAGGCCCGC+CGG - chr4_3:57874596-57874615 None:intergenic 60.0%
!! GGAGGATGAAGGGGTGCTAG+AGG - chr4_3:57875140-57875159 None:intergenic 60.0%
TAGTGGCCACGAGGAGCAAG+GGG - chr4_3:57875225-57875244 None:intergenic 60.0%
! GCCTTCTCCTCAGCTAGCCT+AGG + chr4_3:57875341-57875360 Msa0650640:intron 60.0%
! CCCTAGGCTAGCTGAGGAGA+AGG - chr4_3:57875345-57875364 None:intergenic 60.0%
! TGAGACCCCTAGGCTAGCTG+AGG - chr4_3:57875351-57875370 None:intergenic 60.0%
CGGGGGTGGGAAACAACACA+TGG - chr4_3:57875429-57875448 None:intergenic 60.0%
! GAGATAGGGTGTTTCGGGGG+TGG - chr4_3:57875443-57875462 None:intergenic 60.0%
GCCCTTATAGGCCTCGTGCT+TGG + chr4_3:57878207-57878226 Msa0650640:intron 60.0%
TCCACAACCTCCCAAGCACG+AGG - chr4_3:57878221-57878240 None:intergenic 60.0%
GTGCTTGGGAGGTTGTGGAC+CGG + chr4_3:57878222-57878241 Msa0650640:intron 60.0%
GCACGCGCATTTCCTGACTG+GGG + chr4_3:57878712-57878731 Msa0650640:intron 60.0%
CACGCGCATTTCCTGACTGG+GGG + chr4_3:57878713-57878732 Msa0650640:intron 60.0%
GACGGAAGGAGAAGGAGGGG+AGG - chr4_3:57873509-57873528 None:intergenic 65.0%
CCGCCGGAGGCTTCAAAGGT+GGG - chr4_3:57874580-57874599 None:intergenic 65.0%
!! CCCACCTTTGAAGCCTCCGG+CGG + chr4_3:57874577-57874596 Msa0650640:intron 65.0%
!! CCACCTTTGAAGCCTCCGGC+GGG + chr4_3:57874578-57874597 Msa0650640:intron 65.0%
CGAAAAAGAAGGCCCGCCGG+AGG - chr4_3:57874593-57874612 None:intergenic 65.0%
GCCTCGTGCTTGGGAGGTTG+TGG + chr4_3:57878217-57878236 Msa0650640:intron 65.0%
GACTCGTGCTTGGGGGACTG+TGG + chr4_3:57878553-57878572 Msa0650640:intron 65.0%
! AAGGGGCGCGCCCTAACAGA+GGG - chr4_3:57878630-57878649 None:intergenic 65.0%
CCCGCCGGAGGCTTCAAAGG+TGG - chr4_3:57874581-57874600 None:intergenic 70.0%
AGGCCCGCCGGAGGCTTCAA+AGG - chr4_3:57874584-57874603 None:intergenic 70.0%
! CAAGGGGCGCGCCCTAACAG+AGG - chr4_3:57878631-57878650 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr4_3 gene 57871532 57879773 57871532 ID=Msa0650640;Name=Msa0650640
chr4_3 mRNA 57871532 57879773 57871532 ID=Msa0650640-mRNA-1;Parent=Msa0650640;Name=Msa0650640-mRNA-1;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|0|0|3|0|202
chr4_3 exon 57871532 57871760 57871532 ID=Msa0650640-mRNA-1:exon:15176;Parent=Msa0650640-mRNA-1
chr4_3 exon 57873902 57874071 57873902 ID=Msa0650640-mRNA-1:exon:15177;Parent=Msa0650640-mRNA-1
chr4_3 exon 57879564 57879773 57879564 ID=Msa0650640-mRNA-1:exon:15178;Parent=Msa0650640-mRNA-1
chr4_3 CDS 57871532 57871760 57871532 ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1
chr4_3 CDS 57873902 57874071 57873902 ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1
chr4_3 CDS 57879564 57879773 57879564 ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1
Gene Sequence

>Msa0650640

ATGGCAGCAAGCGGAGAACCAAATAAGTTTCTACCAAGTGAGGTTTTGGGGAGTGCAAAGGTGGCAGCAGAATCAGCACAAACAACTGTAGGGAAACAAGGTGAGAAGGTTGCAACTTCTGCAGAGGTTGTTAAGAAGACAGTTGTAGAGCAAATTGATAGGGCTGCTGATTATGTTCATTCCAAACCTGTGGAGCCTGCCAAAACCGAAGAAGCAGGTGTGCTTGATGGTGCAAAGGATGCAGCAGCTTCAGCACAAACAACTATAGGAGATGCTGCAGCTAATGTTCAGAAGACCGTAGGAGAGTATGCTACCAAGGCTGCTGATTTTGTCCAGTCCAAACCAGAAGAGCCAGCCAAACCCGAAGGTGTGATTGGTGGTGCTAAAAATGCTGTTGGAGATGCAGCAGCTTCAGCACAGAAAACTGTAGGAAATGCTGCAGCTGGTGCCCAGAAAACTGTGGGAAATGCTGCAGCTGGTGTTCATAAGACTGTAGGAGACTATGCTACCATGGCTGCTGATTATGTAAAACCCAAACCAGATCCTATTGGCAAAACCAAAGGTGCGGTTAATGGTGCTACAAAGTCTGTTGGAGGCTTATTTAAATGA

Protein sequence

>Msa0650640

MAASGEPNKFLPSEVLGSAKVAAESAQTTVGKQGEKVATSAEVVKKTVVEQIDRAADYVHSKPVEPAKTEEAGVLDGAKDAAASAQTTIGDAAANVQKTVGEYATKAADFVQSKPEEPAKPEGVIGGAKNAVGDAAASAQKTVGNAAAGAQKTVGNAAAGVHKTVGDYATMAADYVKPKPDPIGKTKGAVNGATKSVGGLFK*