Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650640 | RHN62028.1 | 43.396 | 159 | 61 | 5 | 65 | 202 | 6 | 156 | 1.49e-14 | 79.0 |
Msa0650640 | RHN62028.1 | 61.842 | 152 | 39 | 3 | 1 | 133 | 1 | 152 | 6.17e-43 | 151 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650640 | A0A396IB81 | 43.396 | 159 | 61 | 5 | 65 | 202 | 6 | 156 | 7.11e-15 | 79.0 |
Msa0650640 | A0A396IB81 | 61.842 | 152 | 39 | 3 | 1 | 133 | 1 | 152 | 2.95e-43 | 151 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0604880 | Msa0650640 | 0.831001 | 2.137603e-55 | -8.615850e-47 |
Msa0614980 | Msa0650640 | 0.940847 | 1.156413e-100 | -8.615850e-47 |
Msa0621780 | Msa0650640 | 0.814894 | 1.221032e-51 | -8.615850e-47 |
Msa0629440 | Msa0650640 | -0.816122 | 6.507795e-52 | -8.615850e-47 |
Msa0646190 | Msa0650640 | 0.800963 | 1.126065e-48 | -8.615850e-47 |
Msa0650640 | Msa0650730 | 0.804935 | 1.700793e-49 | -8.615850e-47 |
Msa0650640 | Msa0713210 | 0.852355 | 4.874320e-61 | -8.615850e-47 |
Msa0650640 | Msa0713220 | 0.812463 | 4.185716e-51 | -8.615850e-47 |
Msa0650640 | Msa0713230 | 0.847826 | 9.041771e-60 | -8.615850e-47 |
Msa0650640 | Msa0714360 | -0.802492 | 5.468261e-49 | -8.615850e-47 |
Msa0650640 | Msa0715510 | -0.838643 | 2.545177e-57 | -8.615850e-47 |
Msa0650640 | Msa0755080 | 0.831283 | 1.822156e-55 | -8.615850e-47 |
Msa0650640 | Msa0755090 | 0.804565 | 2.032348e-49 | -8.615850e-47 |
Msa0650640 | Msa0793100 | 0.818372 | 2.028877e-52 | -8.615850e-47 |
Msa0650640 | Msa0795710 | 0.815225 | 1.030833e-51 | -8.615850e-47 |
Msa0650640 | Msa0796950 | 0.811545 | 6.636708e-51 | -8.615850e-47 |
Msa0650640 | Msa0797000 | 0.847822 | 9.064956e-60 | -8.615850e-47 |
Msa0650640 | Msa0833450 | 0.810427 | 1.159228e-50 | -8.615850e-47 |
Msa0650640 | Msa0834450 | 0.826748 | 2.288568e-54 | -8.615850e-47 |
Msa0650640 | Msa0834460 | 0.801600 | 8.339945e-49 | -8.615850e-47 |
Msa0650640 | Msa0964580 | 0.810111 | 1.355628e-50 | -8.615850e-47 |
Msa0650640 | Msa0984000 | 0.816948 | 4.249010e-52 | -8.615850e-47 |
Msa0650640 | Msa1053690 | 0.824893 | 6.307168e-54 | -8.615850e-47 |
Msa0650640 | Msa1073060 | -0.809487 | 1.846903e-50 | -8.615850e-47 |
Msa0650640 | Msa1160780 | -0.808279 | 3.348916e-50 | -8.615850e-47 |
Msa0650640 | Msa1206830 | 0.801739 | 7.811776e-49 | -8.615850e-47 |
Msa0650640 | Msa1257100 | 0.804007 | 2.655467e-49 | -8.615850e-47 |
Msa0650640 | Msa1347870 | -0.812488 | 4.133618e-51 | -8.615850e-47 |
Msa0650640 | Msa1349810 | 0.815864 | 7.429984e-52 | -8.615850e-47 |
Msa0650640 | Msa1354090 | 0.813248 | 2.818172e-51 | -8.615850e-47 |
Msa0650640 | Msa1356180 | 0.836513 | 8.953900e-57 | -8.615850e-47 |
Msa0650640 | Msa1359890 | 0.800948 | 1.133973e-48 | -8.615850e-47 |
Msa0650640 | Msa1363690 | -0.815448 | 9.197332e-52 | -8.615850e-47 |
Msa0650640 | Msa1370930 | -0.807518 | 4.859792e-50 | -8.615850e-47 |
Msa0650640 | Msa1396550 | -0.821836 | 3.266840e-53 | -8.615850e-47 |
Msa0650640 | Msa1406990 | 0.803902 | 2.792372e-49 | -8.615850e-47 |
Msa0650640 | Msa1454410 | -0.835857 | 1.314028e-56 | -8.615850e-47 |
Msa0650640 | Msa1460970 | -0.809760 | 1.613327e-50 | -8.615850e-47 |
Msa0154270 | Msa0650640 | 0.807468 | 4.981224e-50 | -8.615850e-47 |
Msa0197050 | Msa0650640 | -0.857096 | 2.060146e-62 | -8.615850e-47 |
Msa0276730 | Msa0650640 | -0.813875 | 2.051159e-51 | -8.615850e-47 |
Msa0316630 | Msa0650640 | -0.828278 | 9.825229e-55 | -8.615850e-47 |
Msa0336430 | Msa0650640 | -0.803223 | 3.862085e-49 | -8.615850e-47 |
Msa0501510 | Msa0650640 | 0.831561 | 1.556519e-55 | -8.615850e-47 |
Msa0521940 | Msa0650640 | -0.806226 | 9.116010e-50 | -8.615850e-47 |
Msa0525280 | Msa0650640 | 0.800553 | 1.365260e-48 | -8.615850e-47 |
Msa0536410 | Msa0650640 | -0.812248 | 4.665174e-51 | -8.615850e-47 |
Msa0549540 | Msa0650640 | 0.830914 | 2.245651e-55 | -8.615850e-47 |
Msa0563970 | Msa0650640 | -0.828271 | 9.866538e-55 | -8.615850e-47 |
Msa0569050 | Msa0650640 | -0.806493 | 8.008030e-50 | -8.615850e-47 |
Msa0579350 | Msa0650640 | 0.835704 | 1.437417e-56 | -8.615850e-47 |
Msa0579360 | Msa0650640 | 0.970879 | 2.717890e-132 | -8.615850e-47 |
Msa0580540 | Msa0650640 | 0.813399 | 2.611010e-51 | -8.615850e-47 |
Msa0592510 | Msa0650640 | -0.849625 | 2.868376e-60 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0650640 | MtrunA17_Chr4g0042971 | 61.842 | 152 | 39 | 3 | 1 | 133 | 1 | 152 | 5.67e-47 | 151 |
Msa0650640 | MtrunA17_Chr4g0042971 | 43.396 | 159 | 61 | 5 | 65 | 202 | 6 | 156 | 1.37e-18 | 79.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 48 sgRNAs with CRISPR-Local
Find 600 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCACTTGGTAGAAACTTATT+TGG | 0.193374 | 4_3:-57871550 | None:intergenic |
CACACCTGCTTCTTCGGTTT+TGG | 0.199931 | 4_3:-57871731 | None:intergenic |
GTTTCTACCAAGTGAGGTTT+TGG | 0.234806 | 4_3:+57871558 | Msa0650640:CDS |
TCGGGTTTGGCTGGCTCTTC+TGG | 0.238096 | 4_3:-57874015 | None:intergenic |
AAAACCAAAGGTGCGGTTAA+TGG | 0.283737 | 4_3:+57879717 | Msa0650640:CDS |
TTTGGCTGGCTCTTCTGGTT+TGG | 0.325140 | 4_3:-57874010 | None:intergenic |
ATCAAGCACACCTGCTTCTT+CGG | 0.347454 | 4_3:-57871737 | None:intergenic |
TTTGCCAATAGGATCTGGTT+TGG | 0.364938 | 4_3:-57879697 | None:intergenic |
TTTGGCAGGCTCCACAGGTT+TGG | 0.367487 | 4_3:-57871713 | None:intergenic |
CTGGCTCTTCTGGTTTGGAC+TGG | 0.372877 | 4_3:-57874005 | None:intergenic |
ACCAATCACACCTTCGGGTT+TGG | 0.373855 | 4_3:-57874028 | None:intergenic |
TTGCCAATAGGATCTGGTTT+GGG | 0.376061 | 4_3:-57879696 | None:intergenic |
AGCACCACCAATCACACCTT+CGG | 0.387425 | 4_3:-57874034 | None:intergenic |
AGCACCATTAACCGCACCTT+TGG | 0.426753 | 4_3:-57879721 | None:intergenic |
CAGTTGTAGAGCAAATTGAT+AGG | 0.431190 | 4_3:+57871671 | Msa0650640:CDS |
GCTTCAGCACAAACAACTAT+AGG | 0.435825 | 4_3:+57873919 | Msa0650640:CDS |
GCACCACCAATCACACCTTC+GGG | 0.442267 | 4_3:-57874033 | None:intergenic |
ATCACACCTTCGGGTTTGGC+TGG | 0.446616 | 4_3:-57874024 | None:intergenic |
AAACCCAAACCAGATCCTAT+TGG | 0.473112 | 4_3:+57879693 | Msa0650640:CDS |
GCCAAACCCGAAGGTGTGAT+TGG | 0.484923 | 4_3:+57874027 | Msa0650640:CDS |
CTGGACAAAATCAGCAGCCT+TGG | 0.492880 | 4_3:-57873986 | None:intergenic |
GAAGAAGCAGGTGTGCTTGA+TGG | 0.500199 | 4_3:+57871739 | Msa0650640:CDS |
GAATCAGCACAAACAACTGT+AGG | 0.517261 | 4_3:+57871601 | Msa0650640:CDS |
GCACTCCCCAAAACCTCACT+TGG | 0.541506 | 4_3:-57871565 | None:intergenic |
CCTGCCAAAACCGAAGAAGC+AGG | 0.546448 | 4_3:+57871727 | Msa0650640:CDS |
GGTGCTACAAAGTCTGTTGG+AGG | 0.564564 | 4_3:+57879738 | Msa0650640:CDS |
ACTGTAGGAAATGCTGCAGC+TGG | 0.565617 | 4_3:+57879588 | Msa0650640:CDS |
CAAACAACTGTAGGGAAACA+AGG | 0.566889 | 4_3:+57871610 | Msa0650640:CDS |
AAATAAGTTTCTACCAAGTG+AGG | 0.567992 | 4_3:+57871552 | Msa0650640:CDS |
GCTGGTGTTCATAAGACTGT+AGG | 0.573068 | 4_3:+57879639 | Msa0650640:CDS |
AATGGTGCTACAAAGTCTGT+TGG | 0.575777 | 4_3:+57879735 | Msa0650640:CDS |
ACTGTGGGAAATGCTGCAGC+TGG | 0.580044 | 4_3:+57879621 | Msa0650640:CDS |
AGTTGTAGAGCAAATTGATA+GGG | 0.586465 | 4_3:+57871672 | Msa0650640:CDS |
TTATGTTCATTCCAAACCTG+TGG | 0.590330 | 4_3:+57871702 | Msa0650640:CDS |
GCTTCAGCACAGAAAACTGT+AGG | 0.594928 | 4_3:+57879573 | Msa0650640:CDS |
GATCCTATTGGCAAAACCAA+AGG | 0.604323 | 4_3:+57879705 | Msa0650640:CDS |
CTTGGTAGCATACTCTCCTA+CGG | 0.606883 | 4_3:-57873968 | None:intergenic |
GAAGAGCCAGCCAAACCCGA+AGG | 0.622241 | 4_3:+57874018 | Msa0650640:CDS |
AATCAGCACAAACAACTGTA+GGG | 0.628168 | 4_3:+57871602 | Msa0650640:CDS |
GAAGGTTGCAACTTCTGCAG+AGG | 0.629564 | 4_3:+57871636 | Msa0650640:CDS |
CGTAGGAGAGTATGCTACCA+AGG | 0.632082 | 4_3:+57873969 | Msa0650640:CDS |
TGTAGGGAAACAAGGTGAGA+AGG | 0.638781 | 4_3:+57871618 | Msa0650640:CDS |
GCTAATGTTCAGAAGACCGT+AGG | 0.649202 | 4_3:+57873952 | Msa0650640:CDS |
AGCTGGTGCCCAGAAAACTG+TGG | 0.654418 | 4_3:+57879605 | Msa0650640:CDS |
TGTAGGAGACTATGCTACCA+TGG | 0.655972 | 4_3:+57879656 | Msa0650640:CDS |
AAACCCGAAGGTGTGATTGG+TGG | 0.660272 | 4_3:+57874030 | Msa0650640:CDS |
TATTGGCAAAACCAAAGGTG+CGG | 0.681681 | 4_3:+57879710 | Msa0650640:CDS |
GCTGGTGCCCAGAAAACTGT+GGG | 0.683027 | 4_3:+57879606 | Msa0650640:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATTAATTAATTAATTAATA+AGG | + | chr4_3:57874111-57874130 | Msa0650640:intron | 0.0% |
!!! | TTTTCTTTTTTAAGAAAAAA+TGG | - | chr4_3:57873250-57873269 | None:intergenic | 10.0% |
!! | AAAAAGAAAAAAAAAGAAAA+AGG | + | chr4_3:57873260-57873279 | Msa0650640:intron | 10.0% |
!!! | TTTTTCTAATATATTATTTG+AGG | - | chr4_3:57873594-57873613 | None:intergenic | 10.0% |
!! | TGTATATTAATAGAAAAATA+TGG | + | chr4_3:57873689-57873708 | Msa0650640:intron | 10.0% |
!! | TTTAAATATACTATAAAATG+AGG | - | chr4_3:57874463-57874482 | None:intergenic | 10.0% |
!!! | AGTTATATTTTGATTATATA+TGG | - | chr4_3:57875013-57875032 | None:intergenic | 10.0% |
!! | TATAACTATGTAAAAAAAAT+TGG | - | chr4_3:57876235-57876254 | None:intergenic | 10.0% |
!! | TGATAATATGTATATAAAAA+AGG | - | chr4_3:57876272-57876291 | None:intergenic | 10.0% |
!! | AAAGATTAATCATTATTAAA+CGG | - | chr4_3:57876649-57876668 | None:intergenic | 10.0% |
!! | AATTTGTAACAATAATTTAA+GGG | - | chr4_3:57879143-57879162 | None:intergenic | 10.0% |
!!! | TAATTTGTAACAATAATTTA+AGG | - | chr4_3:57879144-57879163 | None:intergenic | 10.0% |
!! | ATTAATTAAAAAATAATGAG+TGG | + | chr4_3:57879241-57879260 | Msa0650640:intron | 10.0% |
!!! | TAAGAAACAATTAACTTTTT+TGG | - | chr4_3:57872363-57872382 | None:intergenic | 15.0% |
!!! | GTTAATTGTTTCTTATAATA+AGG | + | chr4_3:57872368-57872387 | Msa0650640:intron | 15.0% |
!! | TATTGTATTGAAAAATGAAA+TGG | + | chr4_3:57872506-57872525 | Msa0650640:intron | 15.0% |
!! | ATACCTAAAAAAACAATATT+TGG | + | chr4_3:57872875-57872894 | Msa0650640:intron | 15.0% |
!!! | AATCCAAATATTGTTTTTTT+AGG | - | chr4_3:57872881-57872900 | None:intergenic | 15.0% |
!!! | ATAATATTTTATGTGGTTTT+AGG | + | chr4_3:57873220-57873239 | Msa0650640:intron | 15.0% |
!!! | TAATATTTTATGTGGTTTTA+GGG | + | chr4_3:57873221-57873240 | Msa0650640:intron | 15.0% |
!! | AAAAAAAAAGAAAAAGGAAT+GGG | + | chr4_3:57873266-57873285 | Msa0650640:intron | 15.0% |
!! | ATGCATTAAAATACATAATA+AGG | - | chr4_3:57873554-57873573 | None:intergenic | 15.0% |
!!! | AAAATTACACATTTTCAAAT+AGG | + | chr4_3:57873729-57873748 | Msa0650640:intron | 15.0% |
!! | TATTATTTAAGAAATGAGAT+AGG | + | chr4_3:57874073-57874092 | Msa0650640:intron | 15.0% |
!! | ATTAATGACAAAAATTAGTT+CGG | - | chr4_3:57874349-57874368 | None:intergenic | 15.0% |
!! | AACAAAAAATTTGTAACTTT+GGG | + | chr4_3:57874703-57874722 | Msa0650640:intron | 15.0% |
!! | ACATTTCGTATTATATAAAT+CGG | + | chr4_3:57874742-57874761 | Msa0650640:intron | 15.0% |
!! | AATAAGATAGTAAATAGAAT+TGG | - | chr4_3:57875682-57875701 | None:intergenic | 15.0% |
!! | GAAAACTAAAATAAACATAA+GGG | - | chr4_3:57876012-57876031 | None:intergenic | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | - | chr4_3:57876011-57876030 | None:intergenic | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | - | chr4_3:57876011-57876030 | None:intergenic | 15.0% |
!! | GAAAACTAAAATAAACATAA+GGG | - | chr4_3:57876012-57876031 | None:intergenic | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | - | chr4_3:57876011-57876030 | None:intergenic | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | + | chr4_3:57876011-57876030 | Msa0650640:intron | 15.0% |
!! | GAAAACTAAAATAAACATAA+GGG | + | chr4_3:57876012-57876031 | Msa0650640:intron | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | + | chr4_3:57876011-57876030 | Msa0650640:intron | 15.0% |
!! | GAAAACTAAAATAAACATAA+GGG | + | chr4_3:57876012-57876031 | Msa0650640:intron | 15.0% |
!! | TGAAAACTAAAATAAACATA+AGG | + | chr4_3:57876011-57876030 | Msa0650640:intron | 15.0% |
!! | GAAAACTAAAATAAACATAA+GGG | + | chr4_3:57876012-57876031 | Msa0650640:intron | 15.0% |
!! | AAATAAAATGAAAGATTCAA+AGG | + | chr4_3:57877261-57877280 | Msa0650640:intron | 15.0% |
!! | GATTGTTAATATTTCATTAA+GGG | + | chr4_3:57878575-57878594 | Msa0650640:intron | 15.0% |
!!! | AACTGTTATTTATAATATGA+GGG | - | chr4_3:57879445-57879464 | None:intergenic | 15.0% |
!! | AGCATCTTGATTAATTAATA+AGG | + | chr4_3:57871799-57871818 | Msa0650640:intron | 20.0% |
!! | TATCTTATCATGTAATCTAT+AGG | + | chr4_3:57871861-57871880 | Msa0650640:intron | 20.0% |
!!! | ACTTTAAAACATAAACAAAC+AGG | - | chr4_3:57871970-57871989 | None:intergenic | 20.0% |
!! | GTACTAATTAGAGTTATAAA+AGG | + | chr4_3:57872467-57872486 | Msa0650640:intron | 20.0% |
!!! | TGAACTCATAATATTTTATG+TGG | + | chr4_3:57873213-57873232 | Msa0650640:intron | 20.0% |
!!! | AATATTTTATGTGGTTTTAG+GGG | + | chr4_3:57873222-57873241 | Msa0650640:intron | 20.0% |
!! | GAAAAAAAAAGAAAAAGGAA+TGG | + | chr4_3:57873265-57873284 | Msa0650640:intron | 20.0% |
!! | AAAAAAAAGAAAAAGGAATG+GGG | + | chr4_3:57873267-57873286 | Msa0650640:intron | 20.0% |
!! | CATACATAAATAATACAGTA+GGG | - | chr4_3:57873407-57873426 | None:intergenic | 20.0% |
!! | TCATACATAAATAATACAGT+AGG | - | chr4_3:57873408-57873427 | None:intergenic | 20.0% |
!!! | GTTGAAGATTTTAATAATGT+GGG | - | chr4_3:57873445-57873464 | None:intergenic | 20.0% |
!! | ACTTATACACATACTTAAAA+GGG | - | chr4_3:57874153-57874172 | None:intergenic | 20.0% |
!! | AACTTATACACATACTTAAA+AGG | - | chr4_3:57874154-57874173 | None:intergenic | 20.0% |
!! | ATAAATTATGCAACAGAATT+AGG | - | chr4_3:57874265-57874284 | None:intergenic | 20.0% |
!! | TAATCTAAAAATGAACAAAG+TGG | - | chr4_3:57874617-57874636 | None:intergenic | 20.0% |
!!! | ATCGTGTATAAATGAAATTT+TGG | + | chr4_3:57874647-57874666 | Msa0650640:intron | 20.0% |
!! | GAACAAAAAATTTGTAACTT+TGG | + | chr4_3:57874702-57874721 | Msa0650640:intron | 20.0% |
!! | ACAAAAAATTTGTAACTTTG+GGG | + | chr4_3:57874704-57874723 | Msa0650640:intron | 20.0% |
!! | CAAATAGACAATAATCAATA+TGG | - | chr4_3:57874952-57874971 | None:intergenic | 20.0% |
!!! | TTTTGTACAATTTGGATATT+TGG | - | chr4_3:57875063-57875082 | None:intergenic | 20.0% |
!!! | TATCTTATTATGTTCTCTTT+TGG | + | chr4_3:57875693-57875712 | Msa0650640:intron | 20.0% |
!!! | ATTAAGCCGTATTTTTATTT+AGG | - | chr4_3:57875778-57875797 | None:intergenic | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr4_3:57875817-57875836 | Msa0650640:intron | 20.0% |
!!! | TGAAAACTTTTAAAACGTAA+GGG | - | chr4_3:57875873-57875892 | None:intergenic | 20.0% |
!!! | TTGAAAACTTTTAAAACGTA+AGG | - | chr4_3:57875874-57875893 | None:intergenic | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | + | chr4_3:57875817-57875836 | Msa0650640:intron | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+CGG | + | chr4_3:57875817-57875836 | Msa0650640:intron | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr4_3:57875817-57875836 | None:intergenic | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr4_3:57875817-57875836 | None:intergenic | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr4_3:57875817-57875836 | None:intergenic | 20.0% |
!! | TGAAAACTAAAATAAACGTA+TGG | + | chr4_3:57876102-57876121 | Msa0650640:intron | 20.0% |
!! | GAAAACTAAAATAAACGTAT+GGG | + | chr4_3:57876103-57876122 | Msa0650640:intron | 20.0% |
!! | TTGAAACTTTCAAAACATAA+GGG | + | chr4_3:57876132-57876151 | Msa0650640:intron | 20.0% |
!!! | GTTTATTTTAGTTTTCAAGT+TGG | - | chr4_3:57875817-57875836 | None:intergenic | 20.0% |
!!! | TAAGAAGTGTATATAGTAAT+AGG | + | chr4_3:57876332-57876351 | Msa0650640:intron | 20.0% |
!!! | AAGAAGTGTATATAGTAATA+GGG | + | chr4_3:57876333-57876352 | Msa0650640:intron | 20.0% |
!! | ATAATGATTAATCTTTGTTG+AGG | + | chr4_3:57876653-57876672 | Msa0650640:intron | 20.0% |
!! | AATCCATTAATAAATGTGAA+TGG | + | chr4_3:57876883-57876902 | Msa0650640:intron | 20.0% |
!!! | CACTTCGATTATATTTTTAA+GGG | - | chr4_3:57877029-57877048 | None:intergenic | 20.0% |
!!! | ACACTTCGATTATATTTTTA+AGG | - | chr4_3:57877030-57877049 | None:intergenic | 20.0% |
!! | TAAAAATATAATCGAAGTGT+TGG | + | chr4_3:57877030-57877049 | Msa0650640:intron | 20.0% |
!!! | GATCATCTCAAATTATATTT+TGG | - | chr4_3:57877059-57877078 | None:intergenic | 20.0% |
!!! | AAAGAATCTAAAATGTACAA+TGG | + | chr4_3:57877496-57877515 | Msa0650640:intron | 20.0% |
!!! | ACAATACTAGAATTTTTGAA+AGG | + | chr4_3:57877681-57877700 | Msa0650640:intron | 20.0% |
!!! | CAATACTAGAATTTTTGAAA+GGG | + | chr4_3:57877682-57877701 | Msa0650640:intron | 20.0% |
!! | TAACGAATATATCCATAAAA+AGG | + | chr4_3:57878247-57878266 | Msa0650640:intron | 20.0% |
!! | TAACGAATATATCCATAAAA+GGG | - | chr4_3:57878247-57878266 | None:intergenic | 20.0% |
!! | ATAACGAATATATCCATAAA+AGG | - | chr4_3:57878246-57878265 | None:intergenic | 20.0% |
!! | GGATTGTTAATATTTCATTA+AGG | + | chr4_3:57878574-57878593 | Msa0650640:intron | 20.0% |
!!! | AAAATATTTGATAGTACTTG+CGG | - | chr4_3:57878863-57878882 | None:intergenic | 20.0% |
!! | TCATTGTTATCAATATCATT+TGG | - | chr4_3:57878904-57878923 | None:intergenic | 20.0% |
!! | TTTCTTTATTGTGATTTAGT+GGG | - | chr4_3:57879055-57879074 | None:intergenic | 20.0% |
!!! | TTTTCTTTATTGTGATTTAG+TGG | - | chr4_3:57879056-57879075 | None:intergenic | 20.0% |
!! | TTTATATATTCTTCATGCTT+GGG | + | chr4_3:57879079-57879098 | Msa0650640:intron | 20.0% |
!! | TAATACCAAATAATACAGTA+GGG | - | chr4_3:57879334-57879353 | None:intergenic | 20.0% |
!! | ATAATACCAAATAATACAGT+AGG | - | chr4_3:57879335-57879354 | None:intergenic | 20.0% |
!!! | TATTTATGTATGAGTTGATA+TGG | + | chr4_3:57879352-57879371 | Msa0650640:intron | 20.0% |
!!! | GAACTGTTATTTATAATATG+AGG | - | chr4_3:57879446-57879465 | None:intergenic | 20.0% |
! | ACAATCAATACTTAAAGAGA+TGG | - | chr4_3:57871837-57871856 | None:intergenic | 25.0% |
! | TATCATGTAATCTATAGGAT+AGG | + | chr4_3:57871866-57871885 | Msa0650640:intron | 25.0% |
!! | TTGTTTCTTATAATAAGGAC+CGG | + | chr4_3:57872373-57872392 | Msa0650640:intron | 25.0% |
! | TGCAAATGGTTCAATTATTA+TGG | + | chr4_3:57872554-57872573 | Msa0650640:intron | 25.0% |
! | GCAAATGGTTCAATTATTAT+GGG | + | chr4_3:57872555-57872574 | Msa0650640:intron | 25.0% |
!! | CTTTTCTACAATTATATGCA+GGG | - | chr4_3:57872642-57872661 | None:intergenic | 25.0% |
!! | ACTTTTCTACAATTATATGC+AGG | - | chr4_3:57872643-57872662 | None:intergenic | 25.0% |
! | AAAATAACAAGTTTAGCAGT+AGG | + | chr4_3:57872746-57872765 | Msa0650640:intron | 25.0% |
!!! | ATATTTTATGTGGTTTTAGG+GGG | + | chr4_3:57873223-57873242 | Msa0650640:intron | 25.0% |
! | GAACCACAAAAAAGAAAAAA+TGG | - | chr4_3:57873294-57873313 | None:intergenic | 25.0% |
! | CTGTATTATTTATGTATGAG+TGG | + | chr4_3:57873409-57873428 | Msa0650640:intron | 25.0% |
! | TATTTATGTATGAGTGGATA+TGG | + | chr4_3:57873415-57873434 | Msa0650640:intron | 25.0% |
!!! | GGTTGAAGATTTTAATAATG+TGG | - | chr4_3:57873446-57873465 | None:intergenic | 25.0% |
! | GAAAATATCTACTGAAATTG+TGG | - | chr4_3:57873467-57873486 | None:intergenic | 25.0% |
!! | TTTCAGTAGATATTTTCTCT+TGG | + | chr4_3:57873470-57873489 | Msa0650640:intron | 25.0% |
! | TCAACTGTGTCAAATATTAT+GGG | - | chr4_3:57873531-57873550 | None:intergenic | 25.0% |
! | TGAATCTATGAATGATGATA+GGG | - | chr4_3:57873821-57873840 | None:intergenic | 25.0% |
! | ATGAATCTATGAATGATGAT+AGG | - | chr4_3:57873822-57873841 | None:intergenic | 25.0% |
! | TTCAAACAACAAAGAAACAA+TGG | + | chr4_3:57873846-57873865 | Msa0650640:intron | 25.0% |
! | AAGAGAACAAAATAAGAGAA+AGG | - | chr4_3:57874303-57874322 | None:intergenic | 25.0% |
!!! | TCTCTTATTTTGTTCTCTTT+TGG | + | chr4_3:57874304-57874323 | Msa0650640:intron | 25.0% |
!! | TTTGTTCGAACTTAGAATTT+TGG | + | chr4_3:57874394-57874413 | Msa0650640:intron | 25.0% |
! | GTTAAGTTAGAAGAGATAAA+GGG | + | chr4_3:57874416-57874435 | Msa0650640:intron | 25.0% |
! | AGGGTATATCATCTAATTAT+TGG | + | chr4_3:57874435-57874454 | Msa0650640:intron | 25.0% |
! | GGGTATATCATCTAATTATT+GGG | + | chr4_3:57874436-57874455 | Msa0650640:intron | 25.0% |
!! | TCAAGTACTTTTGTACAATT+TGG | - | chr4_3:57875071-57875090 | None:intergenic | 25.0% |
! | ATACAATTTCATAAACCTAC+TGG | + | chr4_3:57875105-57875124 | Msa0650640:intron | 25.0% |
! | TACAATTTCATAAACCTACT+GGG | + | chr4_3:57875106-57875125 | Msa0650640:intron | 25.0% |
! | TGTAAAGTCATCCAATATTA+AGG | + | chr4_3:57875585-57875604 | Msa0650640:intron | 25.0% |
! | TGCAAAGAAACATAAACAAA+CGG | - | chr4_3:57875649-57875668 | None:intergenic | 25.0% |
! | ACTCCTCCTAAATAAAAATA+CGG | + | chr4_3:57875769-57875788 | Msa0650640:intron | 25.0% |
! | TTGAAACTTTCAAAACGTAA+GGG | - | chr4_3:57876072-57876091 | None:intergenic | 25.0% |
!!! | CGTTTTAAAAGTTTTCAAGT+TGG | + | chr4_3:57875876-57875895 | Msa0650640:intron | 25.0% |
! | TTGAAACTTTCAAAACGTAA+GGG | - | chr4_3:57876072-57876091 | None:intergenic | 25.0% |
! | TTGAAACTTTCAAAACGTAA+GGG | + | chr4_3:57876072-57876091 | Msa0650640:intron | 25.0% |
!!! | ATGTTTTGAAAGTTTCAAGT+TGG | - | chr4_3:57876130-57876149 | None:intergenic | 25.0% |
! | CTTGAAACTTTCAAAACATA+AGG | + | chr4_3:57876131-57876150 | Msa0650640:intron | 25.0% |
! | TTAGAATCTAATTGCATGTT+TGG | - | chr4_3:57876190-57876209 | None:intergenic | 25.0% |
! | AGATAAAGAACAAAACACTT+AGG | - | chr4_3:57876418-57876437 | None:intergenic | 25.0% |
! | AATTGAAGTTACCATGTTAT+CGG | + | chr4_3:57876559-57876578 | Msa0650640:intron | 25.0% |
!!! | TAAGTTTTATACCGATAACA+TGG | - | chr4_3:57876573-57876592 | None:intergenic | 25.0% |
! | AAAATGTTATACAGAGAACA+TGG | - | chr4_3:57876621-57876640 | None:intergenic | 25.0% |
! | GATTAATCATTATTAAACGG+TGG | - | chr4_3:57876646-57876665 | None:intergenic | 25.0% |
! | AATCTTTGTTGAGGAATATA+TGG | + | chr4_3:57876662-57876681 | Msa0650640:intron | 25.0% |
! | ATCTTTGTTGAGGAATATAT+GGG | + | chr4_3:57876663-57876682 | Msa0650640:intron | 25.0% |
! | GTACCATTCACATTTATTAA+TGG | - | chr4_3:57876889-57876908 | None:intergenic | 25.0% |
! | CCATATAAACATCTCAAATT+TGG | - | chr4_3:57876989-57877008 | None:intergenic | 25.0% |
!! | CCAAATTTGAGATGTTTATA+TGG | + | chr4_3:57876986-57877005 | Msa0650640:intron | 25.0% |
! | TTGAGATGATCATACAAATA+TGG | + | chr4_3:57877068-57877087 | Msa0650640:intron | 25.0% |
! | TCCACAGAAAAATGAAAATT+GGG | + | chr4_3:57877113-57877132 | Msa0650640:intron | 25.0% |
!!! | TTATAATCTTTGGGTTTTTC+CGG | - | chr4_3:57877362-57877381 | None:intergenic | 25.0% |
! | CTTGATAGGTTATAATCTTT+GGG | - | chr4_3:57877371-57877390 | None:intergenic | 25.0% |
! | AAAGCAAGAATAAAACAACA+AGG | + | chr4_3:57877404-57877423 | Msa0650640:intron | 25.0% |
! | TTGATATTGATCTTTGTCAA+GGG | - | chr4_3:57877437-57877456 | None:intergenic | 25.0% |
!!! | AAAAAAACTTGTTAGTCCAT+TGG | + | chr4_3:57877566-57877585 | Msa0650640:intron | 25.0% |
!! | AATTCTCATATTTTCAGAGA+GGG | - | chr4_3:57877597-57877616 | None:intergenic | 25.0% |
! | AAAATTCTAGTATTGTTGCT+TGG | - | chr4_3:57877677-57877696 | None:intergenic | 25.0% |
! | CAACTCCAATTCTTATTATA+GGG | + | chr4_3:57877740-57877759 | Msa0650640:intron | 25.0% |
! | AGATACCCTATAATAAGAAT+TGG | - | chr4_3:57877748-57877767 | None:intergenic | 25.0% |
!!! | GATAAAGGTGCTAATTATTT+AGG | - | chr4_3:57877842-57877861 | None:intergenic | 25.0% |
!!! | TTTAAGAGTTTTATTTCTCC+AGG | - | chr4_3:57877995-57878014 | None:intergenic | 25.0% |
! | TATGGATATATTCGTTATAC+CGG | - | chr4_3:57878366-57878385 | None:intergenic | 25.0% |
! | TATGGATATATTCGTTATAC+CGG | + | chr4_3:57878366-57878385 | Msa0650640:intron | 25.0% |
! | CAGATAATACATTAACATAG+AGG | - | chr4_3:57878480-57878499 | None:intergenic | 25.0% |
! | ATGTCTTGAAAATGATTTCA+AGG | - | chr4_3:57878799-57878818 | None:intergenic | 25.0% |
! | GAGTACAATATAGAAAACTA+GGG | - | chr4_3:57878839-57878858 | None:intergenic | 25.0% |
! | TGAGTACAATATAGAAAACT+AGG | - | chr4_3:57878840-57878859 | None:intergenic | 25.0% |
!!! | TTGAGGTTTTAAGTAAATCT+TGG | - | chr4_3:57878964-57878983 | None:intergenic | 25.0% |
! | TTCCATTTCTATTATACAGT+TGG | - | chr4_3:57879011-57879030 | None:intergenic | 25.0% |
! | CTTTATATATTCTTCATGCT+TGG | + | chr4_3:57879078-57879097 | Msa0650640:intron | 25.0% |
! | CAAATTATATTCTTAGCCAA+AGG | + | chr4_3:57879157-57879176 | Msa0650640:intron | 25.0% |
! | GTTAGTTAGTACTCTATTTA+AGG | - | chr4_3:57879218-57879237 | None:intergenic | 25.0% |
! | AAATAATGAGTGGTAGTTAA+AGG | + | chr4_3:57879251-57879270 | Msa0650640:intron | 25.0% |
! | CAAACAGTACTATATTTCAA+AGG | + | chr4_3:57879299-57879318 | Msa0650640:intron | 25.0% |
!!! | TGTAGTTGGAGATTTTAATA+CGG | - | chr4_3:57879383-57879402 | None:intergenic | 25.0% |
! | TTGCAAAGAGAAAATATCTA+CGG | - | chr4_3:57879410-57879429 | None:intergenic | 25.0% |
! | GTTATTTATAATATGAGGGA+AGG | - | chr4_3:57879441-57879460 | None:intergenic | 25.0% |
!! | CTTTTAAACAACAAAATCGA+TGG | + | chr4_3:57879509-57879528 | Msa0650640:intron | 25.0% |
TCACTTGGTAGAAACTTATT+TGG | - | chr4_3:57871553-57871572 | None:intergenic | 30.0% | |
AAATAAGTTTCTACCAAGTG+AGG | + | chr4_3:57871552-57871571 | Msa0650640:CDS | 30.0% | |
AGTTGTAGAGCAAATTGATA+GGG | + | chr4_3:57871672-57871691 | Msa0650640:CDS | 30.0% | |
TAAAGTGGAACCTTACATAT+TGG | - | chr4_3:57871925-57871944 | None:intergenic | 30.0% | |
!! | TGTTGATTCAAACTGTAAAG+TGG | - | chr4_3:57871940-57871959 | None:intergenic | 30.0% |
AACCCACTTTATTAATCCTT+TGG | + | chr4_3:57872118-57872137 | Msa0650640:intron | 30.0% | |
TGCCAAAGGATTAATAAAGT+GGG | - | chr4_3:57872123-57872142 | None:intergenic | 30.0% | |
ATGCCAAAGGATTAATAAAG+TGG | - | chr4_3:57872124-57872143 | None:intergenic | 30.0% | |
TGAGTAAGTAATCTCGAAAA+AGG | + | chr4_3:57872143-57872162 | Msa0650640:intron | 30.0% | |
ACCTAAAAAGTCAACTTTGA+GGG | - | chr4_3:57872278-57872297 | None:intergenic | 30.0% | |
AACCTAAAAAGTCAACTTTG+AGG | - | chr4_3:57872279-57872298 | None:intergenic | 30.0% | |
CCACTTTACATTTATGATAG+TGG | - | chr4_3:57872419-57872438 | None:intergenic | 30.0% | |
CCACTATCATAAATGTAAAG+TGG | + | chr4_3:57872416-57872435 | Msa0650640:intron | 30.0% | |
! | ATGAAATGGCTCAGTTATTT+TGG | + | chr4_3:57872520-57872539 | Msa0650640:intron | 30.0% |
!! | TGAAATGGCTCAGTTATTTT+GGG | + | chr4_3:57872521-57872540 | Msa0650640:intron | 30.0% |
ATGGTTCAATTATTATGGGA+CGG | + | chr4_3:57872559-57872578 | Msa0650640:intron | 30.0% | |
! | CAGAGACAAGATGTAATTTT+CGG | + | chr4_3:57872792-57872811 | Msa0650640:intron | 30.0% |
!! | GAGGATATTTTTGTCAATTG+AGG | + | chr4_3:57872830-57872849 | Msa0650640:intron | 30.0% |
!!! | GTTCATGGTCTATTTTTTTG+TGG | - | chr4_3:57873165-57873184 | None:intergenic | 30.0% |
AAAATGAAATCACGAGTTCA+TGG | - | chr4_3:57873180-57873199 | None:intergenic | 30.0% | |
!!! | GGTCCATTTTTTCTTTTTTG+TGG | + | chr4_3:57873288-57873307 | Msa0650640:intron | 30.0% |
CACTGTTTGTTTATTGATGT+CGG | - | chr4_3:57873366-57873385 | None:intergenic | 30.0% | |
GTCAACTGTGTCAAATATTA+TGG | - | chr4_3:57873532-57873551 | None:intergenic | 30.0% | |
TTCAAATAGGTCATCTATTG+CGG | + | chr4_3:57873742-57873761 | Msa0650640:intron | 30.0% | |
GGAAAAACATAAACAATCAG+AGG | - | chr4_3:57874244-57874263 | None:intergenic | 30.0% | |
GGTTAAGTTAGAAGAGATAA+AGG | + | chr4_3:57874415-57874434 | Msa0650640:intron | 30.0% | |
ACATCTCAGATTATATAAGC+TGG | - | chr4_3:57874785-57874804 | None:intergenic | 30.0% | |
ATAAATATTCTCAGTACTGC+TGG | - | chr4_3:57874832-57874851 | None:intergenic | 30.0% | |
GCATGTGTAAAATATGTGTT+TGG | + | chr4_3:57874879-57874898 | Msa0650640:intron | 30.0% | |
TTGTAAAGTCATCAAAGATG+AGG | + | chr4_3:57875523-57875542 | Msa0650640:intron | 30.0% | |
GCAAAGAAACATAAACAAAC+GGG | - | chr4_3:57875648-57875667 | None:intergenic | 30.0% | |
!! | AAGCCGTATTTTTATTTAGG+AGG | - | chr4_3:57875775-57875794 | None:intergenic | 30.0% |
CTTGAAACTTTCAAAACGTA+AGG | - | chr4_3:57876071-57876090 | None:intergenic | 30.0% | |
!!! | ACGTTTTGAAAGTTTCAAGT+TGG | + | chr4_3:57875846-57875865 | Msa0650640:intron | 30.0% |
CTTGAAACTTTCAAAACGTA+AGG | - | chr4_3:57876071-57876090 | None:intergenic | 30.0% | |
!!! | ACGTTTTGAAAGTTTCAAGT+TGG | + | chr4_3:57875846-57875865 | Msa0650640:intron | 30.0% |
CTTGAAACTTTCAAAACGTA+AGG | + | chr4_3:57876071-57876090 | Msa0650640:intron | 30.0% | |
TAAGTCTAATGACTTAGTTC+TGG | + | chr4_3:57876591-57876610 | Msa0650640:intron | 30.0% | |
! | AAGTCTAATGACTTAGTTCT+GGG | + | chr4_3:57876592-57876611 | Msa0650640:intron | 30.0% |
TCTTTGTTGAGGAATATATG+GGG | + | chr4_3:57876664-57876683 | Msa0650640:intron | 30.0% | |
AAAACAATTGATTGAGAGAG+GGG | - | chr4_3:57876704-57876723 | None:intergenic | 30.0% | |
GAAAACAATTGATTGAGAGA+GGG | - | chr4_3:57876705-57876724 | None:intergenic | 30.0% | |
ACTTATAGACAGAAAACAGT+TGG | + | chr4_3:57876923-57876942 | Msa0650640:intron | 30.0% | |
CTTATAGACAGAAAACAGTT+GGG | + | chr4_3:57876924-57876943 | Msa0650640:intron | 30.0% | |
TTATAGACAGAAAACAGTTG+GGG | + | chr4_3:57876925-57876944 | Msa0650640:intron | 30.0% | |
GTCCACAGAAAAATGAAAAT+TGG | + | chr4_3:57877112-57877131 | Msa0650640:intron | 30.0% | |
!! | TCCCAATTTTCATTTTTCTG+TGG | - | chr4_3:57877117-57877136 | None:intergenic | 30.0% |
! | TGAATGTTATTGTTGATAGG+TGG | - | chr4_3:57877228-57877247 | None:intergenic | 30.0% |
ACCTATCAACAATAACATTC+AGG | + | chr4_3:57877227-57877246 | Msa0650640:intron | 30.0% | |
TCCTGAATGTTATTGTTGAT+AGG | - | chr4_3:57877231-57877250 | None:intergenic | 30.0% | |
!!! | TTCCCTTGATTATTTTGGTT+GGG | - | chr4_3:57877311-57877330 | None:intergenic | 30.0% |
! | TTGAGTTCCCTTGATTATTT+TGG | - | chr4_3:57877316-57877335 | None:intergenic | 30.0% |
TGCCTCATTAAAAATCTTTC+CGG | + | chr4_3:57877340-57877359 | Msa0650640:intron | 30.0% | |
! | TTCCGGAAAGATTTTTAATG+AGG | - | chr4_3:57877345-57877364 | None:intergenic | 30.0% |
CCTTGATAGGTTATAATCTT+TGG | - | chr4_3:57877372-57877391 | None:intergenic | 30.0% | |
CCAAAGATTATAACCTATCA+AGG | + | chr4_3:57877369-57877388 | Msa0650640:intron | 30.0% | |
! | TATAGACTTTTCTCCTTGAT+AGG | - | chr4_3:57877385-57877404 | None:intergenic | 30.0% |
AGAATAAAACAACAAGGAAG+AGG | + | chr4_3:57877410-57877429 | Msa0650640:intron | 30.0% | |
GTTGATATTGATCTTTGTCA+AGG | - | chr4_3:57877438-57877457 | None:intergenic | 30.0% | |
TTCAACAAAATGATTCGACT+TGG | - | chr4_3:57877534-57877553 | None:intergenic | 30.0% | |
! | AAGTCGAATCATTTTGTTGA+AGG | + | chr4_3:57877533-57877552 | Msa0650640:intron | 30.0% |
! | ATTCTCATATTTTCAGAGAG+GGG | - | chr4_3:57877596-57877615 | None:intergenic | 30.0% |
! | GAATTCTCATATTTTCAGAG+AGG | - | chr4_3:57877598-57877617 | None:intergenic | 30.0% |
ATAAGAATTGGAGTTGGATT+TGG | - | chr4_3:57877736-57877755 | None:intergenic | 30.0% | |
CCTATAATAAGAATTGGAGT+TGG | - | chr4_3:57877742-57877761 | None:intergenic | 30.0% | |
CCAACTCCAATTCTTATTAT+AGG | + | chr4_3:57877739-57877758 | Msa0650640:intron | 30.0% | |
! | GCAGAGATTTTCATAGATAA+AGG | - | chr4_3:57877857-57877876 | None:intergenic | 30.0% |
GCTTTAACAATTTCCTAGAT+GGG | - | chr4_3:57878069-57878088 | None:intergenic | 30.0% | |
TGCTTTAACAATTTCCTAGA+TGG | - | chr4_3:57878070-57878089 | None:intergenic | 30.0% | |
TTTCTATGAACGTTCATTGA+TGG | - | chr4_3:57878130-57878149 | None:intergenic | 30.0% | |
TTCATAGAAATATAGCCCTA+AGG | + | chr4_3:57878140-57878159 | Msa0650640:intron | 30.0% | |
TCATAGAAATATAGCCCTAA+GGG | + | chr4_3:57878141-57878160 | Msa0650640:intron | 30.0% | |
AAAAATCACTTTGCCCTTAT+AGG | + | chr4_3:57878195-57878214 | Msa0650640:intron | 30.0% | |
ATTATCTGCAAGTACATTTG+TGG | + | chr4_3:57878492-57878511 | Msa0650640:intron | 30.0% | |
! | CGAAATGGTTTAAGTTAAGT+TGG | - | chr4_3:57878522-57878541 | None:intergenic | 30.0% |
CTTGAAAATGATTTCAAGGT+GGG | - | chr4_3:57878795-57878814 | None:intergenic | 30.0% | |
TCTTGAAAATGATTTCAAGG+TGG | - | chr4_3:57878796-57878815 | None:intergenic | 30.0% | |
ATGACCACTACTTTACATTA+CGG | + | chr4_3:57878935-57878954 | Msa0650640:intron | 30.0% | |
TTAAAACCTCAATCATAGTG+TGG | + | chr4_3:57878972-57878991 | Msa0650640:intron | 30.0% | |
GTCCAACTGTATAATAGAAA+TGG | + | chr4_3:57879006-57879025 | Msa0650640:intron | 30.0% | |
!! | GTGATTTAGTGGGTAAATTT+TGG | - | chr4_3:57879045-57879064 | None:intergenic | 30.0% |
AACAATAATTTAAGGGTTCG+AGG | - | chr4_3:57879136-57879155 | None:intergenic | 30.0% | |
GTATTCCCTACTGTATTATT+TGG | + | chr4_3:57873399-57873418 | Msa0650640:intron | 30.0% | |
!! | GTAGTTGGAGATTTTAATAC+GGG | - | chr4_3:57879382-57879401 | None:intergenic | 30.0% |
ATATCTACGGAAATTGTAGT+TGG | - | chr4_3:57879397-57879416 | None:intergenic | 30.0% | |
! | TTTCTACCAAGTGAGGTTTT+GGG | + | chr4_3:57871559-57871578 | Msa0650640:CDS | 35.0% |
AATCAGCACAAACAACTGTA+GGG | + | chr4_3:57871602-57871621 | Msa0650640:CDS | 35.0% | |
CAGTTGTAGAGCAAATTGAT+AGG | + | chr4_3:57871671-57871690 | Msa0650640:CDS | 35.0% | |
TTATGTTCATTCCAAACCTG+TGG | + | chr4_3:57871702-57871721 | Msa0650640:CDS | 35.0% | |
! | GATGGTGTTAAAAAGACTGT+TGG | + | chr4_3:57871757-57871776 | Msa0650640:intron | 35.0% |
!! | GATGATGGATCCAATATGTA+AGG | + | chr4_3:57871912-57871931 | Msa0650640:intron | 35.0% |
AAACATAAACAAACAGGAGC+AGG | - | chr4_3:57871964-57871983 | None:intergenic | 35.0% | |
AGATTACTTACTCATGCCAA+AGG | - | chr4_3:57872137-57872156 | None:intergenic | 35.0% | |
GTAAGTAATCTCGAAAAAGG+TGG | + | chr4_3:57872146-57872165 | Msa0650640:intron | 35.0% | |
AAGAGTCTAGTGAGTTTAGT+GGG | - | chr4_3:57872201-57872220 | None:intergenic | 35.0% | |
AAAGAGTCTAGTGAGTTTAG+TGG | - | chr4_3:57872202-57872221 | None:intergenic | 35.0% | |
! | AAACTCACTAGACTCTTTTG+TGG | + | chr4_3:57872204-57872223 | Msa0650640:intron | 35.0% |
! | AACTCACTAGACTCTTTTGT+GGG | + | chr4_3:57872205-57872224 | Msa0650640:intron | 35.0% |
!! | AAATCCCTAATCGCTTTTGA+GGG | - | chr4_3:57872247-57872266 | None:intergenic | 35.0% |
!! | AAAATCCCTAATCGCTTTTG+AGG | - | chr4_3:57872248-57872267 | None:intergenic | 35.0% |
! | AAAGTCAACTTTGAGGGAAT+AGG | - | chr4_3:57872272-57872291 | None:intergenic | 35.0% |
!! | TCCCTCAAAGTTGACTTTTT+AGG | + | chr4_3:57872274-57872293 | Msa0650640:intron | 35.0% |
TTTCTTATAATAAGGACCGG+AGG | + | chr4_3:57872376-57872395 | Msa0650640:intron | 35.0% | |
TTCTTATAATAAGGACCGGA+GGG | + | chr4_3:57872377-57872396 | Msa0650640:intron | 35.0% | |
AAATACACAAATACTCCCTC+CGG | - | chr4_3:57872395-57872414 | None:intergenic | 35.0% | |
!!! | TGGGACACTTTTTTTGCAAA+TGG | + | chr4_3:57872540-57872559 | Msa0650640:intron | 35.0% |
TTCAATTATTATGGGACGGA+AGG | + | chr4_3:57872563-57872582 | Msa0650640:intron | 35.0% | |
TCTACAATTATATGCAGGGA+CGG | - | chr4_3:57872638-57872657 | None:intergenic | 35.0% | |
ATAACTCGTGATAGATGCAA+GGG | - | chr4_3:57872706-57872725 | None:intergenic | 35.0% | |
AATAACTCGTGATAGATGCA+AGG | - | chr4_3:57872707-57872726 | None:intergenic | 35.0% | |
ATAACAAGTTTAGCAGTAGG+TGG | + | chr4_3:57872749-57872768 | Msa0650640:intron | 35.0% | |
ATCTTGTCTCTGGTCATTAT+CGG | - | chr4_3:57872784-57872803 | None:intergenic | 35.0% | |
CGAAAATTACATCTTGTCTC+TGG | - | chr4_3:57872794-57872813 | None:intergenic | 35.0% | |
ATAATACAGTAGGGAATACG+TGG | - | chr4_3:57873398-57873417 | None:intergenic | 35.0% | |
CTGTGTCAAATATTATGGGA+CGG | - | chr4_3:57873527-57873546 | None:intergenic | 35.0% | |
TCAAATAGGTCATCTATTGC+GGG | + | chr4_3:57873743-57873762 | Msa0650640:intron | 35.0% | |
AAAGAAACAATGGCATCAAC+TGG | + | chr4_3:57873856-57873875 | Msa0650640:intron | 35.0% | |
!!! | TGGACCCAATAACGATTTTT+TGG | + | chr4_3:57873876-57873895 | Msa0650640:intron | 35.0% |
CCTGCCAAAAAATCGTTATT+GGG | - | chr4_3:57873883-57873902 | None:intergenic | 35.0% | |
ACCTGCCAAAAAATCGTTAT+TGG | - | chr4_3:57873884-57873903 | None:intergenic | 35.0% | |
!! | GGTAATGGATCCAATATGTA+AGG | + | chr4_3:57874184-57874203 | Msa0650640:intron | 35.0% |
AGCTCTGTTACCTTACATAT+TGG | - | chr4_3:57874197-57874216 | None:intergenic | 35.0% | |
AAACATAAACAATCAGAGGC+AGG | - | chr4_3:57874240-57874259 | None:intergenic | 35.0% | |
!! | CGACGCACAATAAGTTTTAA+AGG | + | chr4_3:57874545-57874564 | Msa0650640:intron | 35.0% |
AACAAAGTGGACGAAAAAGA+AGG | - | chr4_3:57874604-57874623 | None:intergenic | 35.0% | |
GTTATGTCTGTGATGCAATT+TGG | - | chr4_3:57874915-57874934 | None:intergenic | 35.0% | |
TTTGTAGCTGATCATTGTAG+AGG | - | chr4_3:57875187-57875206 | None:intergenic | 35.0% | |
! | TGTATGTGTTGCTAAGACAT+GGG | - | chr4_3:57875374-57875393 | None:intergenic | 35.0% |
! | TTGTATGTGTTGCTAAGACA+TGG | - | chr4_3:57875375-57875394 | None:intergenic | 35.0% |
AAACAACACATGGTTACATG+AGG | - | chr4_3:57875419-57875438 | None:intergenic | 35.0% | |
CAACACATGATCAAGAAACT+CGG | + | chr4_3:57875479-57875498 | Msa0650640:intron | 35.0% | |
GAGCTCTGTTACCTTAATAT+TGG | - | chr4_3:57875599-57875618 | None:intergenic | 35.0% | |
ATACGGCTTAATTGCATGTT+TGG | + | chr4_3:57875786-57875805 | Msa0650640:intron | 35.0% | |
GGAAAACAATTGATTGAGAG+AGG | - | chr4_3:57876706-57876725 | None:intergenic | 35.0% | |
TATAGACAGAAAACAGTTGG+GGG | + | chr4_3:57876926-57876945 | Msa0650640:intron | 35.0% | |
! | TAAAGATTTCCGGCAAGTTT+TGG | - | chr4_3:57876953-57876972 | None:intergenic | 35.0% |
! | TTTGTCCCTCTAAAGATTTC+CGG | - | chr4_3:57876963-57876982 | None:intergenic | 35.0% |
!! | TTTTTCTGTGGACTATGTTG+AGG | - | chr4_3:57877105-57877124 | None:intergenic | 35.0% |
CCAACATAGTTGAGATATCT+TGG | - | chr4_3:57877192-57877211 | None:intergenic | 35.0% | |
CCAAGATATCTCAACTATGT+TGG | + | chr4_3:57877189-57877208 | Msa0650640:intron | 35.0% | |
!! | ATGAAAGATTCAAAGGCACT+TGG | + | chr4_3:57877268-57877287 | Msa0650640:intron | 35.0% |
!!! | GATTATTTTGGTTGGGGTTT+TGG | - | chr4_3:57877304-57877323 | None:intergenic | 35.0% |
AACCCCAACCAAAATAATCA+AGG | + | chr4_3:57877305-57877324 | Msa0650640:intron | 35.0% | |
ACCCCAACCAAAATAATCAA+GGG | + | chr4_3:57877306-57877325 | Msa0650640:intron | 35.0% | |
!!! | TCCCTTGATTATTTTGGTTG+GGG | - | chr4_3:57877310-57877329 | None:intergenic | 35.0% |
!!! | GTTCCCTTGATTATTTTGGT+TGG | - | chr4_3:57877312-57877331 | None:intergenic | 35.0% |
!! | ACAAAATGATTCGACTTGGA+TGG | - | chr4_3:57877530-57877549 | None:intergenic | 35.0% |
GGTTATGTTAAGAGATGTCT+AGG | - | chr4_3:57877893-57877912 | None:intergenic | 35.0% | |
ACACTTGACCCAATTAAAGA+TGG | + | chr4_3:57877922-57877941 | Msa0650640:intron | 35.0% | |
CATAGAAATATAGCCCTAAG+GGG | + | chr4_3:57878142-57878161 | Msa0650640:intron | 35.0% | |
TACATATCCCTAAAGGTCTT+AGG | - | chr4_3:57878284-57878303 | None:intergenic | 35.0% | |
! | TAAGACCTTTAGGGATATGT+AGG | + | chr4_3:57878283-57878302 | Msa0650640:intron | 35.0% |
TAAGACCTACATATCCCTAA+AGG | - | chr4_3:57878291-57878310 | None:intergenic | 35.0% | |
ACTCGAGTAATGAGATCTAT+GGG | - | chr4_3:57878324-57878343 | None:intergenic | 35.0% | |
AGATACGAGAAAGACAGTTT+CGG | - | chr4_3:57878663-57878682 | None:intergenic | 35.0% | |
AAACTGTCTTTCTCGTATCT+TGG | + | chr4_3:57878663-57878682 | Msa0650640:intron | 35.0% | |
AACTGTCTTTCTCGTATCTT+GGG | + | chr4_3:57878664-57878683 | Msa0650640:intron | 35.0% | |
AACTAGGGTTCGATCTATTT+AGG | - | chr4_3:57878824-57878843 | None:intergenic | 35.0% | |
TAACATCCACACTATGATTG+AGG | - | chr4_3:57878981-57879000 | None:intergenic | 35.0% | |
AATCATAGTGTGGATGTTAC+TGG | + | chr4_3:57878982-57879001 | Msa0650640:intron | 35.0% | |
TGAGTGGTAGTTAAAGGAAT+TGG | + | chr4_3:57879257-57879276 | Msa0650640:intron | 35.0% | |
GAGTGGTAGTTAAAGGAATT+GGG | + | chr4_3:57879258-57879277 | Msa0650640:intron | 35.0% | |
AGTGGTAGTTAAAGGAATTG+GGG | + | chr4_3:57879259-57879278 | Msa0650640:intron | 35.0% | |
GTACTGTTTGCTTCTTATGT+CGG | - | chr4_3:57879289-57879308 | None:intergenic | 35.0% | |
ATAATACAGTAGGGAATACG+TGG | - | chr4_3:57873398-57873417 | None:intergenic | 35.0% | |
TAAACAACAAAATCGATGGC+TGG | + | chr4_3:57879513-57879532 | Msa0650640:intron | 35.0% | |
! | TTTTACATAATCAGCAGCCA+TGG | - | chr4_3:57879676-57879695 | None:intergenic | 35.0% |
! | GTTTCTACCAAGTGAGGTTT+TGG | + | chr4_3:57871558-57871577 | Msa0650640:CDS | 40.0% |
! | TTCTACCAAGTGAGGTTTTG+GGG | + | chr4_3:57871560-57871579 | Msa0650640:CDS | 40.0% |
GAATCAGCACAAACAACTGT+AGG | + | chr4_3:57871601-57871620 | Msa0650640:CDS | 40.0% | |
CAAACAACTGTAGGGAAACA+AGG | + | chr4_3:57871610-57871629 | Msa0650640:CDS | 40.0% | |
GGTGTTAAAAAGACTGTTGG+AGG | + | chr4_3:57871760-57871779 | Msa0650640:intron | 40.0% | |
AGTTACCACATGTCTGATGA+TGG | + | chr4_3:57871897-57871916 | Msa0650640:intron | 40.0% | |
TCTCGAAAAAGGTGGCTTAT+AGG | + | chr4_3:57872154-57872173 | Msa0650640:intron | 40.0% | |
AAAACCCCTCAAAAGCGATT+AGG | + | chr4_3:57872239-57872258 | Msa0650640:intron | 40.0% | |
AAACCCCTCAAAAGCGATTA+GGG | + | chr4_3:57872240-57872259 | Msa0650640:intron | 40.0% | |
!! | AATCCCTAATCGCTTTTGAG+GGG | - | chr4_3:57872246-57872265 | None:intergenic | 40.0% |
ATCCAGACTTTAGGTACATG+TGG | - | chr4_3:57872615-57872634 | None:intergenic | 40.0% | |
TCTTGTCTCTGGTCATTATC+GGG | - | chr4_3:57872783-57872802 | None:intergenic | 40.0% | |
TCGGTCGAAACAGAAAATTG+AGG | + | chr4_3:57872811-57872830 | Msa0650640:intron | 40.0% | |
AAACACGTGAGACAATGTCA+CGG | - | chr4_3:57873316-57873335 | None:intergenic | 40.0% | |
GTCAAATATTATGGGACGGA+AGG | - | chr4_3:57873523-57873542 | None:intergenic | 40.0% | |
!!! | CCCAATAACGATTTTTTGGC+AGG | + | chr4_3:57873880-57873899 | Msa0650640:intron | 40.0% |
GCTTCAGCACAAACAACTAT+AGG | + | chr4_3:57873919-57873938 | Msa0650640:CDS | 40.0% | |
GTGTATAAGTTAGCACTGTC+TGG | + | chr4_3:57874163-57874182 | Msa0650640:intron | 40.0% | |
AAGTTAGCACTGTCTGGTAA+TGG | + | chr4_3:57874169-57874188 | Msa0650640:intron | 40.0% | |
GACCTGAGCCTACAAATTAT+AGG | + | chr4_3:57874496-57874515 | Msa0650640:intron | 40.0% | |
! | GTGCTAGGCCTATAATTTGT+AGG | - | chr4_3:57874507-57874526 | None:intergenic | 40.0% |
TTCTCAGTACTGCTGGAAAA+TGG | - | chr4_3:57874825-57874844 | None:intergenic | 40.0% | |
GCAACTGGGTTACTAATTAG+TGG | - | chr4_3:57875242-57875261 | None:intergenic | 40.0% | |
GCATCAAGACATTAGCAACT+GGG | - | chr4_3:57875256-57875275 | None:intergenic | 40.0% | |
TGCATCAAGACATTAGCAAC+TGG | - | chr4_3:57875257-57875276 | None:intergenic | 40.0% | |
! | CGTTTGACCAAGTCTAGAAT+CGG | + | chr4_3:57875284-57875303 | Msa0650640:intron | 40.0% |
! | GTTTGACCAAGTCTAGAATC+GGG | + | chr4_3:57875285-57875304 | Msa0650640:intron | 40.0% |
AGATTTCGATTGAAGAGGTG+GGG | - | chr4_3:57875313-57875332 | None:intergenic | 40.0% | |
GAGATTTCGATTGAAGAGGT+GGG | - | chr4_3:57875314-57875333 | None:intergenic | 40.0% | |
AGAGATTTCGATTGAAGAGG+TGG | - | chr4_3:57875315-57875334 | None:intergenic | 40.0% | |
TGCAGAGATTTCGATTGAAG+AGG | - | chr4_3:57875318-57875337 | None:intergenic | 40.0% | |
! | ACTTAGGAGATAGGGTGTTT+CGG | - | chr4_3:57875449-57875468 | None:intergenic | 40.0% |
CGAGTTTCTTGATCATGTGT+TGG | - | chr4_3:57875481-57875500 | None:intergenic | 40.0% | |
ATGATCAAGAAACTCGGCAT+AGG | + | chr4_3:57875485-57875504 | Msa0650640:intron | 40.0% | |
CTTTACAACAGATGTCTCTG+AGG | - | chr4_3:57875511-57875530 | None:intergenic | 40.0% | |
AAAGATGAGGCAGATATGAC+TGG | + | chr4_3:57875536-57875555 | Msa0650640:intron | 40.0% | |
AGAAACATAAACAAACGGGC+AGG | - | chr4_3:57875644-57875663 | None:intergenic | 40.0% | |
TCAAGTCGGTCCAAAACATA+AGG | + | chr4_3:57875980-57875999 | Msa0650640:intron | 40.0% | |
CAAGTCGGTCCAAAACATAA+GGG | + | chr4_3:57875981-57876000 | Msa0650640:intron | 40.0% | |
!!! | CAAGTTGGTCCCTTATGTTT+TGG | - | chr4_3:57875950-57875969 | None:intergenic | 40.0% |
AATATATGGGGCACGCAAAT+TGG | + | chr4_3:57876676-57876695 | Msa0650640:intron | 40.0% | |
! | TTGTTTTCGACTCTTGCGTA+CGG | - | chr4_3:57876727-57876746 | None:intergenic | 40.0% |
AACTTGCCGGAAATCTTTAG+AGG | + | chr4_3:57876954-57876973 | Msa0650640:intron | 40.0% | |
ACTTGCCGGAAATCTTTAGA+GGG | + | chr4_3:57876955-57876974 | Msa0650640:intron | 40.0% | |
CCTTTCAAGATGAGCTCTAT+GGG | - | chr4_3:57877787-57877806 | None:intergenic | 40.0% | |
GAAAATCTCTGCACAAGTTG+TGG | + | chr4_3:57877865-57877884 | Msa0650640:intron | 40.0% | |
TGGGTCAAGTGTCATATTGA+TGG | - | chr4_3:57877914-57877933 | None:intergenic | 40.0% | |
CTTGACCCAATTAAAGATGG+AGG | + | chr4_3:57877925-57877944 | Msa0650640:intron | 40.0% | |
GGCATCCTCCATCTTTAATT+GGG | - | chr4_3:57877933-57877952 | None:intergenic | 40.0% | |
TGGCATCCTCCATCTTTAAT+TGG | - | chr4_3:57877934-57877953 | None:intergenic | 40.0% | |
TGATTCTCCTTGTATCAAGG+AGG | - | chr4_3:57877962-57877981 | None:intergenic | 40.0% | |
TCCTTGATACAAGGAGAATC+AGG | + | chr4_3:57877961-57877980 | Msa0650640:intron | 40.0% | |
TCTTAGTATGTCTCCCATCT+AGG | + | chr4_3:57878053-57878072 | Msa0650640:intron | 40.0% | |
ATAGTGAGCTTCATCTGACT+TGG | - | chr4_3:57878171-57878190 | None:intergenic | 40.0% | |
! | GCAAGCTTATCGCCTTTTTA+TGG | - | chr4_3:57878262-57878281 | None:intergenic | 40.0% |
TAAGCTTGCCTAAGACCTTT+AGG | + | chr4_3:57878273-57878292 | Msa0650640:intron | 40.0% | |
AAGCTTGCCTAAGACCTTTA+GGG | + | chr4_3:57878274-57878293 | Msa0650640:intron | 40.0% | |
CACTCGAGTAATGAGATCTA+TGG | - | chr4_3:57878325-57878344 | None:intergenic | 40.0% | |
AGATCTCATTACTCGAGTGA+AGG | + | chr4_3:57878326-57878345 | Msa0650640:intron | 40.0% | |
!!! | AGAGCTACGTAGTTTTGTAC+CGG | - | chr4_3:57878388-57878407 | None:intergenic | 40.0% |
TCTGATTCCCTAAGACCTTT+CGG | + | chr4_3:57878405-57878424 | Msa0650640:intron | 40.0% | |
ACATATCCCGAAAGGTCTTA+GGG | - | chr4_3:57878415-57878434 | None:intergenic | 40.0% | |
TACATATCCCGAAAGGTCTT+AGG | - | chr4_3:57878416-57878435 | None:intergenic | 40.0% | |
TAAGACCTTTCGGGATATGT+AGG | + | chr4_3:57878415-57878434 | Msa0650640:intron | 40.0% | |
ATTTAGATGTGAGCTCGACA+AGG | - | chr4_3:57878452-57878471 | None:intergenic | 40.0% | |
AGTCTTGAAACAAGGCGAAA+TGG | - | chr4_3:57878537-57878556 | None:intergenic | 40.0% | |
TTGTTTCAAGACTCGTGCTT+GGG | + | chr4_3:57878544-57878563 | Msa0650640:intron | 40.0% | |
! | AGCCCTCTAGAAAGGTTTAT+TGG | + | chr4_3:57878604-57878623 | Msa0650640:intron | 40.0% |
GGCCAATAAACCTTTCTAGA+GGG | - | chr4_3:57878609-57878628 | None:intergenic | 40.0% | |
AGTTTCGGAGCTAAAAGCAA+GGG | - | chr4_3:57878648-57878667 | None:intergenic | 40.0% | |
ACTGTCTTTCTCGTATCTTG+GGG | + | chr4_3:57878665-57878684 | Msa0650640:intron | 40.0% | |
! | CTGGGGGTTTAAGTTACTTA+CGG | + | chr4_3:57878729-57878748 | Msa0650640:intron | 40.0% |
AAGTTACTTACGGCCTAAGT+CGG | + | chr4_3:57878739-57878758 | Msa0650640:intron | 40.0% | |
AGCTTATGATTTCCCGACTT+AGG | - | chr4_3:57878755-57878774 | None:intergenic | 40.0% | |
GGGAAATCATAAGCTCAAGA+GGG | + | chr4_3:57878760-57878779 | Msa0650640:intron | 40.0% | |
ACCACTACTTTACATTACGG+TGG | + | chr4_3:57878938-57878957 | Msa0650640:intron | 40.0% | |
GTCATTGAATGAGATGCCTT+TGG | - | chr4_3:57879176-57879195 | None:intergenic | 40.0% | |
GCACTTGCCAAAATATCGTT+AGG | - | chr4_3:57879540-57879559 | None:intergenic | 40.0% | |
!!! | CGATATTTTGGCAAGTGCAA+AGG | + | chr4_3:57879542-57879561 | Msa0650640:intron | 40.0% |
! | AGCATTTCCCACAGTTTTCT+GGG | - | chr4_3:57879616-57879635 | None:intergenic | 40.0% |
AAACCCAAACCAGATCCTAT+TGG | + | chr4_3:57879693-57879712 | Msa0650640:CDS | 40.0% | |
! | TTGCCAATAGGATCTGGTTT+GGG | - | chr4_3:57879699-57879718 | None:intergenic | 40.0% |
TTTGCCAATAGGATCTGGTT+TGG | - | chr4_3:57879700-57879719 | None:intergenic | 40.0% | |
!!! | TTGGTTTTGCCAATAGGATC+TGG | - | chr4_3:57879705-57879724 | None:intergenic | 40.0% |
GATCCTATTGGCAAAACCAA+AGG | + | chr4_3:57879705-57879724 | Msa0650640:CDS | 40.0% | |
TATTGGCAAAACCAAAGGTG+CGG | + | chr4_3:57879710-57879729 | Msa0650640:CDS | 40.0% | |
! | AAAACCAAAGGTGCGGTTAA+TGG | + | chr4_3:57879717-57879736 | Msa0650640:CDS | 40.0% |
!! | AATGGTGCTACAAAGTCTGT+TGG | + | chr4_3:57879735-57879754 | Msa0650640:CDS | 40.0% |
TGTAGGGAAACAAGGTGAGA+AGG | + | chr4_3:57871618-57871637 | Msa0650640:CDS | 45.0% | |
ATCAAGCACACCTGCTTCTT+CGG | - | chr4_3:57871740-57871759 | None:intergenic | 45.0% | |
TGGATCCATCATCAGACATG+TGG | - | chr4_3:57871905-57871924 | None:intergenic | 45.0% | |
!! | TCGCTTTTGAGGGGTTTTGA+GGG | - | chr4_3:57872237-57872256 | None:intergenic | 45.0% |
!! | ATCGCTTTTGAGGGGTTTTG+AGG | - | chr4_3:57872238-57872257 | None:intergenic | 45.0% |
CTCCACATGTACCTAAAGTC+TGG | + | chr4_3:57872610-57872629 | Msa0650640:intron | 45.0% | |
!! | TGTCTCACGTGTTTCTAGCA+TGG | + | chr4_3:57873322-57873341 | Msa0650640:intron | 45.0% |
!! | GTCTCACGTGTTTCTAGCAT+GGG | + | chr4_3:57873323-57873342 | Msa0650640:intron | 45.0% |
TATTATGGGACGGAAGGAGA+AGG | - | chr4_3:57873517-57873536 | None:intergenic | 45.0% | |
!!! | CGATTTTTTGGCAGGTGCAA+AGG | + | chr4_3:57873888-57873907 | Msa0650640:intron | 45.0% |
GCTAATGTTCAGAAGACCGT+AGG | + | chr4_3:57873952-57873971 | Msa0650640:CDS | 45.0% | |
! | CTTGGTAGCATACTCTCCTA+CGG | - | chr4_3:57873971-57873990 | None:intergenic | 45.0% |
! | GGTGGTGCTAAAAATGCTGT+TGG | + | chr4_3:57874048-57874067 | Msa0650640:CDS | 45.0% |
! | GGCCTATAATTTGTAGGCTC+AGG | - | chr4_3:57874501-57874520 | None:intergenic | 45.0% |
AATTATAGGCCTAGCACCCT+TGG | + | chr4_3:57874510-57874529 | Msa0650640:intron | 45.0% | |
!! | TGCTGGAAAATGGTGTCATG+GGG | - | chr4_3:57874815-57874834 | None:intergenic | 45.0% |
!! | CTGCTGGAAAATGGTGTCAT+GGG | - | chr4_3:57874816-57874835 | None:intergenic | 45.0% |
! | ACTGCTGGAAAATGGTGTCA+TGG | - | chr4_3:57874817-57874836 | None:intergenic | 45.0% |
! | TTGTACCGATGGAGGATGAA+GGG | - | chr4_3:57875150-57875169 | None:intergenic | 45.0% |
AGTGAGGAATGTTGTACCGA+TGG | - | chr4_3:57875161-57875180 | None:intergenic | 45.0% | |
ATCATTGTAGAGGCTCAGTG+AGG | - | chr4_3:57875177-57875196 | None:intergenic | 45.0% | |
GTTACTAATTAGTGGCCACG+AGG | - | chr4_3:57875234-57875253 | None:intergenic | 45.0% | |
GTTACATGAGGTGGTATACG+AGG | - | chr4_3:57875407-57875426 | None:intergenic | 45.0% | |
CAACACATGGTTACATGAGG+TGG | - | chr4_3:57875416-57875435 | None:intergenic | 45.0% | |
! | TTAGGAGATAGGGTGTTTCG+GGG | - | chr4_3:57875447-57875466 | None:intergenic | 45.0% |
! | CTTAGGAGATAGGGTGTTTC+GGG | - | chr4_3:57875448-57875467 | None:intergenic | 45.0% |
CACAGAGGACTTAGGAGATA+GGG | - | chr4_3:57875457-57875476 | None:intergenic | 45.0% | |
TCACAGAGGACTTAGGAGAT+AGG | - | chr4_3:57875458-57875477 | None:intergenic | 45.0% | |
! | TGATCATGTGTTGGTCACAG+AGG | - | chr4_3:57875472-57875491 | None:intergenic | 45.0% |
GCAGATATGACTGGATGCTT+GGG | + | chr4_3:57875545-57875564 | Msa0650640:intron | 45.0% | |
TATGACTGGATGCTTGGGAA+TGG | + | chr4_3:57875550-57875569 | Msa0650640:intron | 45.0% | |
TCAACTATGTTGGCATCCCT+TGG | + | chr4_3:57877199-57877218 | Msa0650640:intron | 45.0% | |
! | TGTTGATAGGTGGTGACCAA+GGG | - | chr4_3:57877218-57877237 | None:intergenic | 45.0% |
! | TTGTTGATAGGTGGTGACCA+AGG | - | chr4_3:57877219-57877238 | None:intergenic | 45.0% |
TTCAGAGAGGGGAAAACCAA+TGG | - | chr4_3:57877585-57877604 | None:intergenic | 45.0% | |
! | GTATTGTTGCTTGGCACATG+AGG | - | chr4_3:57877668-57877687 | None:intergenic | 45.0% |
CCCATAGAGCTCATCTTGAA+AGG | + | chr4_3:57877784-57877803 | Msa0650640:intron | 45.0% | |
GCCTTTCAAGATGAGCTCTA+TGG | - | chr4_3:57877788-57877807 | None:intergenic | 45.0% | |
!! | CTTGTATCAAGGAGGTGTTG+TGG | - | chr4_3:57877954-57877973 | None:intergenic | 45.0% |
CACAACACCTCCTTGATACA+AGG | + | chr4_3:57877952-57877971 | Msa0650640:intron | 45.0% | |
GCCTGATTCTCCTTGTATCA+AGG | - | chr4_3:57877965-57877984 | None:intergenic | 45.0% | |
! | GCAAGCTTATCGCCCTTTTA+TGG | + | chr4_3:57878348-57878367 | Msa0650640:intron | 45.0% |
CTGATTCCCTAAGACCTTTC+GGG | + | chr4_3:57878406-57878425 | Msa0650640:intron | 45.0% | |
CAAGCACGAGTCTTGAAACA+AGG | - | chr4_3:57878545-57878564 | None:intergenic | 45.0% | |
CTTGTTTCAAGACTCGTGCT+TGG | + | chr4_3:57878543-57878562 | Msa0650640:intron | 45.0% | |
TGTTTCAAGACTCGTGCTTG+GGG | + | chr4_3:57878545-57878564 | Msa0650640:intron | 45.0% | |
GGGCCAATAAACCTTTCTAG+AGG | - | chr4_3:57878610-57878629 | None:intergenic | 45.0% | |
AGGTTTATTGGCCCTCTGTT+AGG | + | chr4_3:57878616-57878635 | Msa0650640:intron | 45.0% | |
GGTTTATTGGCCCTCTGTTA+GGG | + | chr4_3:57878617-57878636 | Msa0650640:intron | 45.0% | |
GTTTCGGAGCTAAAAGCAAG+GGG | - | chr4_3:57878647-57878666 | None:intergenic | 45.0% | |
CAGTTTCGGAGCTAAAAGCA+AGG | - | chr4_3:57878649-57878668 | None:intergenic | 45.0% | |
AGTAACTTAAACCCCCAGTC+AGG | - | chr4_3:57878727-57878746 | None:intergenic | 45.0% | |
AGTTACTTACGGCCTAAGTC+GGG | + | chr4_3:57878740-57878759 | Msa0650640:intron | 45.0% | |
CGGGAAATCATAAGCTCAAG+AGG | + | chr4_3:57878759-57878778 | Msa0650640:intron | 45.0% | |
GCCACCGTAATGTAAAGTAG+TGG | - | chr4_3:57878942-57878961 | None:intergenic | 45.0% | |
AAGGGTTCGAGGTTTCAACA+TGG | - | chr4_3:57879125-57879144 | None:intergenic | 45.0% | |
! | GGCTGGACCTAACGATATTT+TGG | + | chr4_3:57879530-57879549 | Msa0650640:intron | 45.0% |
GCTTCAGCACAGAAAACTGT+AGG | + | chr4_3:57879573-57879592 | Msa0650640:CDS | 45.0% | |
! | CAGCATTTCCCACAGTTTTC+TGG | - | chr4_3:57879617-57879636 | None:intergenic | 45.0% |
GCTGGTGTTCATAAGACTGT+AGG | + | chr4_3:57879639-57879658 | Msa0650640:CDS | 45.0% | |
TGTAGGAGACTATGCTACCA+TGG | + | chr4_3:57879656-57879675 | Msa0650640:CDS | 45.0% | |
!!! | GCACCTTTGGTTTTGCCAAT+AGG | - | chr4_3:57879711-57879730 | None:intergenic | 45.0% |
!!! | TAATTTTATTTTTTTTTTGA+AGG | - | chr4_3:57872994-57873013 | None:intergenic | 5.0% |
!!! | TTTTAGTTAATATTTAAATT+TGG | + | chr4_3:57876389-57876408 | Msa0650640:intron | 5.0% |
!! | TTTAGTTAATATTTAAATTT+GGG | + | chr4_3:57876390-57876409 | Msa0650640:intron | 5.0% |
!!! | TTTTTTATTTCTATTTAATT+TGG | + | chr4_3:57876438-57876457 | Msa0650640:intron | 5.0% |
!!! | TGAGGTTTTGGGGAGTGCAA+AGG | + | chr4_3:57871570-57871589 | Msa0650640:CDS | 50.0% |
GAAGGTTGCAACTTCTGCAG+AGG | + | chr4_3:57871636-57871655 | Msa0650640:CDS | 50.0% | |
! | CACACCTGCTTCTTCGGTTT+TGG | - | chr4_3:57871734-57871753 | None:intergenic | 50.0% |
GAAGAAGCAGGTGTGCTTGA+TGG | + | chr4_3:57871739-57871758 | Msa0650640:CDS | 50.0% | |
!!! | CGCTTTTGAGGGGTTTTGAG+GGG | - | chr4_3:57872236-57872255 | None:intergenic | 50.0% |
!! | ACGTGTTTCTAGCATGGGAC+AGG | + | chr4_3:57873328-57873347 | Msa0650640:intron | 50.0% |
TCTAGCATGGGACAGGAACA+AGG | + | chr4_3:57873335-57873354 | Msa0650640:intron | 50.0% | |
CTAGCATGGGACAGGAACAA+GGG | + | chr4_3:57873336-57873355 | Msa0650640:intron | 50.0% | |
! | CGTAGGAGAGTATGCTACCA+AGG | + | chr4_3:57873969-57873988 | Msa0650640:CDS | 50.0% |
CTGGACAAAATCAGCAGCCT+TGG | - | chr4_3:57873989-57874008 | None:intergenic | 50.0% | |
! | TTTGGCTGGCTCTTCTGGTT+TGG | - | chr4_3:57874013-57874032 | None:intergenic | 50.0% |
! | ACCAATCACACCTTCGGGTT+TGG | - | chr4_3:57874031-57874050 | None:intergenic | 50.0% |
! | AAACCCGAAGGTGTGATTGG+TGG | + | chr4_3:57874030-57874049 | Msa0650640:CDS | 50.0% |
AGCACCACCAATCACACCTT+CGG | - | chr4_3:57874037-57874056 | None:intergenic | 50.0% | |
AGGCTCAGGTCACTCACTTA+TGG | - | chr4_3:57874487-57874506 | None:intergenic | 50.0% | |
!! | TTTCCCACCTTTGAAGCCTC+CGG | + | chr4_3:57874574-57874593 | Msa0650640:intron | 50.0% |
!! | GCTGGAAAATGGTGTCATGG+GGG | - | chr4_3:57874814-57874833 | None:intergenic | 50.0% |
TAGAGGTCGTGTTACCCAGT+AGG | - | chr4_3:57875123-57875142 | None:intergenic | 50.0% | |
! | TGTACCGATGGAGGATGAAG+GGG | - | chr4_3:57875149-57875168 | None:intergenic | 50.0% |
! | GTTGTACCGATGGAGGATGA+AGG | - | chr4_3:57875151-57875170 | None:intergenic | 50.0% |
! | GAGGAATGTTGTACCGATGG+AGG | - | chr4_3:57875158-57875177 | None:intergenic | 50.0% |
GCAAGGGGTTCAATTCGGAA+AGG | - | chr4_3:57875210-57875229 | None:intergenic | 50.0% | |
GAGGAGCAAGGGGTTCAATT+CGG | - | chr4_3:57875215-57875234 | None:intergenic | 50.0% | |
! | TAGGAGATAGGGTGTTTCGG+GGG | - | chr4_3:57875446-57875465 | None:intergenic | 50.0% |
! | GTGTTGGTCACAGAGGACTT+AGG | - | chr4_3:57875465-57875484 | None:intergenic | 50.0% |
GGCAGATATGACTGGATGCT+TGG | + | chr4_3:57875544-57875563 | Msa0650640:intron | 50.0% | |
AACGGGCAGGATCACTAAAG+TGG | - | chr4_3:57875631-57875650 | None:intergenic | 50.0% | |
!! | TCTGACTTGGTCTCCCCTTA+GGG | - | chr4_3:57878158-57878177 | None:intergenic | 50.0% |
!! | ATCTGACTTGGTCTCCCCTT+AGG | - | chr4_3:57878159-57878178 | None:intergenic | 50.0% |
CTGGTCCTACATATCCCGAA+AGG | - | chr4_3:57878423-57878442 | None:intergenic | 50.0% | |
GAGCTCGACAAGGATTTCTC+TGG | - | chr4_3:57878442-57878461 | None:intergenic | 50.0% | |
GTTTCAAGACTCGTGCTTGG+GGG | + | chr4_3:57878546-57878565 | Msa0650640:intron | 50.0% | |
! | GGCTTACTAGCCCTCTAGAA+AGG | + | chr4_3:57878596-57878615 | Msa0650640:intron | 50.0% |
ACTGTAGGAAATGCTGCAGC+TGG | + | chr4_3:57879588-57879607 | Msa0650640:CDS | 50.0% | |
AGCACCATTAACCGCACCTT+TGG | - | chr4_3:57879724-57879743 | None:intergenic | 50.0% | |
! | GGTGCTACAAAGTCTGTTGG+AGG | + | chr4_3:57879738-57879757 | Msa0650640:CDS | 50.0% |
GCACTCCCCAAAACCTCACT+TGG | - | chr4_3:57871568-57871587 | None:intergenic | 55.0% | |
!!! | GGTTTTGGGGAGTGCAAAGG+TGG | + | chr4_3:57871573-57871592 | Msa0650640:CDS | 55.0% |
TTTGGCAGGCTCCACAGGTT+TGG | - | chr4_3:57871716-57871735 | None:intergenic | 55.0% | |
!! | CCTGCTTCTTCGGTTTTGGC+AGG | - | chr4_3:57871730-57871749 | None:intergenic | 55.0% |
CCTGCCAAAACCGAAGAAGC+AGG | + | chr4_3:57871727-57871746 | Msa0650640:CDS | 55.0% | |
CAGGGACGGATCCAGACTTT+AGG | - | chr4_3:57872624-57872643 | None:intergenic | 55.0% | |
ATGGGACGGAAGGAGAAGGA+GGG | - | chr4_3:57873513-57873532 | None:intergenic | 55.0% | |
TATGGGACGGAAGGAGAAGG+AGG | - | chr4_3:57873514-57873533 | None:intergenic | 55.0% | |
!! | CTGGCTCTTCTGGTTTGGAC+TGG | - | chr4_3:57874008-57874027 | None:intergenic | 55.0% |
! | ATCACACCTTCGGGTTTGGC+TGG | - | chr4_3:57874027-57874046 | None:intergenic | 55.0% |
! | GCCAAACCCGAAGGTGTGAT+TGG | + | chr4_3:57874027-57874046 | Msa0650640:CDS | 55.0% |
GCACCACCAATCACACCTTC+GGG | - | chr4_3:57874036-57874055 | None:intergenic | 55.0% | |
ATAGGCCTAGCACCCTTGGA+TGG | + | chr4_3:57874514-57874533 | Msa0650640:intron | 55.0% | |
!! | TCTAGCCATCCAAGGGTGCT+AGG | - | chr4_3:57874522-57874541 | None:intergenic | 55.0% |
! | GTCGAGCTCTAGCCATCCAA+GGG | - | chr4_3:57874529-57874548 | None:intergenic | 55.0% |
AGCACCCCTTCATCCTCCAT+CGG | + | chr4_3:57875142-57875161 | Msa0650640:intron | 55.0% | |
ATTGAACCCCTTGCTCCTCG+TGG | + | chr4_3:57875216-57875235 | Msa0650640:intron | 55.0% | |
TTAGTGGCCACGAGGAGCAA+GGG | - | chr4_3:57875226-57875245 | None:intergenic | 55.0% | |
ATTAGTGGCCACGAGGAGCA+AGG | - | chr4_3:57875227-57875246 | None:intergenic | 55.0% | |
GGGGAACCCGATTCTAGACT+TGG | - | chr4_3:57875294-57875313 | None:intergenic | 55.0% | |
! | CCTTCTCCTCAGCTAGCCTA+GGG | + | chr4_3:57875342-57875361 | Msa0650640:intron | 55.0% |
! | CTTCTCCTCAGCTAGCCTAG+GGG | + | chr4_3:57875343-57875362 | Msa0650640:intron | 55.0% |
AAGACATGGGTGAGACCCCT+AGG | - | chr4_3:57875361-57875380 | None:intergenic | 55.0% | |
! | AGATAGGGTGTTTCGGGGGT+GGG | - | chr4_3:57875442-57875461 | None:intergenic | 55.0% |
GTTGGGGGACCAAAACTTGC+CGG | + | chr4_3:57876941-57876960 | Msa0650640:intron | 55.0% | |
GAGAATCAGGCGCATGAACC+TGG | + | chr4_3:57877974-57877993 | Msa0650640:intron | 55.0% | |
CCCAAGCACGAGGCCTATAA+GGG | - | chr4_3:57878211-57878230 | None:intergenic | 55.0% | |
CCCTTATAGGCCTCGTGCTT+GGG | + | chr4_3:57878208-57878227 | Msa0650640:intron | 55.0% | |
TCCCAAGCACGAGGCCTATA+AGG | - | chr4_3:57878212-57878231 | None:intergenic | 55.0% | |
TTATAGGCCTCGTGCTTGGG+AGG | + | chr4_3:57878211-57878230 | Msa0650640:intron | 55.0% | |
TAGCACGCGCATTTCCTGAC+TGG | + | chr4_3:57878710-57878729 | Msa0650640:intron | 55.0% | |
AGCACGCGCATTTCCTGACT+GGG | + | chr4_3:57878711-57878730 | Msa0650640:intron | 55.0% | |
AGCTGGTGCCCAGAAAACTG+TGG | + | chr4_3:57879605-57879624 | Msa0650640:CDS | 55.0% | |
GCTGGTGCCCAGAAAACTGT+GGG | + | chr4_3:57879606-57879625 | Msa0650640:CDS | 55.0% | |
ACTGTGGGAAATGCTGCAGC+TGG | + | chr4_3:57879621-57879640 | Msa0650640:CDS | 55.0% | |
!! | TCGGTTTTGGCAGGCTCCAC+AGG | - | chr4_3:57871721-57871740 | None:intergenic | 60.0% |
ACGGAAGGAGAAGGAGGGGA+GGG | - | chr4_3:57873508-57873527 | None:intergenic | 60.0% | |
TGGGACGGAAGGAGAAGGAG+GGG | - | chr4_3:57873512-57873531 | None:intergenic | 60.0% | |
! | TCGGGTTTGGCTGGCTCTTC+TGG | - | chr4_3:57874018-57874037 | None:intergenic | 60.0% |
GAAGAGCCAGCCAAACCCGA+AGG | + | chr4_3:57874018-57874037 | Msa0650640:CDS | 60.0% | |
! | CGTCGAGCTCTAGCCATCCA+AGG | - | chr4_3:57874530-57874549 | None:intergenic | 60.0% |
GGACGAAAAAGAAGGCCCGC+CGG | - | chr4_3:57874596-57874615 | None:intergenic | 60.0% | |
!! | GGAGGATGAAGGGGTGCTAG+AGG | - | chr4_3:57875140-57875159 | None:intergenic | 60.0% |
TAGTGGCCACGAGGAGCAAG+GGG | - | chr4_3:57875225-57875244 | None:intergenic | 60.0% | |
! | GCCTTCTCCTCAGCTAGCCT+AGG | + | chr4_3:57875341-57875360 | Msa0650640:intron | 60.0% |
! | CCCTAGGCTAGCTGAGGAGA+AGG | - | chr4_3:57875345-57875364 | None:intergenic | 60.0% |
! | TGAGACCCCTAGGCTAGCTG+AGG | - | chr4_3:57875351-57875370 | None:intergenic | 60.0% |
CGGGGGTGGGAAACAACACA+TGG | - | chr4_3:57875429-57875448 | None:intergenic | 60.0% | |
! | GAGATAGGGTGTTTCGGGGG+TGG | - | chr4_3:57875443-57875462 | None:intergenic | 60.0% |
GCCCTTATAGGCCTCGTGCT+TGG | + | chr4_3:57878207-57878226 | Msa0650640:intron | 60.0% | |
TCCACAACCTCCCAAGCACG+AGG | - | chr4_3:57878221-57878240 | None:intergenic | 60.0% | |
GTGCTTGGGAGGTTGTGGAC+CGG | + | chr4_3:57878222-57878241 | Msa0650640:intron | 60.0% | |
GCACGCGCATTTCCTGACTG+GGG | + | chr4_3:57878712-57878731 | Msa0650640:intron | 60.0% | |
CACGCGCATTTCCTGACTGG+GGG | + | chr4_3:57878713-57878732 | Msa0650640:intron | 60.0% | |
GACGGAAGGAGAAGGAGGGG+AGG | - | chr4_3:57873509-57873528 | None:intergenic | 65.0% | |
CCGCCGGAGGCTTCAAAGGT+GGG | - | chr4_3:57874580-57874599 | None:intergenic | 65.0% | |
!! | CCCACCTTTGAAGCCTCCGG+CGG | + | chr4_3:57874577-57874596 | Msa0650640:intron | 65.0% |
!! | CCACCTTTGAAGCCTCCGGC+GGG | + | chr4_3:57874578-57874597 | Msa0650640:intron | 65.0% |
CGAAAAAGAAGGCCCGCCGG+AGG | - | chr4_3:57874593-57874612 | None:intergenic | 65.0% | |
GCCTCGTGCTTGGGAGGTTG+TGG | + | chr4_3:57878217-57878236 | Msa0650640:intron | 65.0% | |
GACTCGTGCTTGGGGGACTG+TGG | + | chr4_3:57878553-57878572 | Msa0650640:intron | 65.0% | |
! | AAGGGGCGCGCCCTAACAGA+GGG | - | chr4_3:57878630-57878649 | None:intergenic | 65.0% |
CCCGCCGGAGGCTTCAAAGG+TGG | - | chr4_3:57874581-57874600 | None:intergenic | 70.0% | |
AGGCCCGCCGGAGGCTTCAA+AGG | - | chr4_3:57874584-57874603 | None:intergenic | 70.0% | |
! | CAAGGGGCGCGCCCTAACAG+AGG | - | chr4_3:57878631-57878650 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4_3 | gene | 57871532 | 57879773 | 57871532 | ID=Msa0650640;Name=Msa0650640 |
chr4_3 | mRNA | 57871532 | 57879773 | 57871532 | ID=Msa0650640-mRNA-1;Parent=Msa0650640;Name=Msa0650640-mRNA-1;_AED=0.27;_eAED=0.28;_QI=0|0|0|1|0|0|3|0|202 |
chr4_3 | exon | 57871532 | 57871760 | 57871532 | ID=Msa0650640-mRNA-1:exon:15176;Parent=Msa0650640-mRNA-1 |
chr4_3 | exon | 57873902 | 57874071 | 57873902 | ID=Msa0650640-mRNA-1:exon:15177;Parent=Msa0650640-mRNA-1 |
chr4_3 | exon | 57879564 | 57879773 | 57879564 | ID=Msa0650640-mRNA-1:exon:15178;Parent=Msa0650640-mRNA-1 |
chr4_3 | CDS | 57871532 | 57871760 | 57871532 | ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1 |
chr4_3 | CDS | 57873902 | 57874071 | 57873902 | ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1 |
chr4_3 | CDS | 57879564 | 57879773 | 57879564 | ID=Msa0650640-mRNA-1:cds;Parent=Msa0650640-mRNA-1 |
Gene Sequence |
Protein sequence |