Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579360 | RHN62028.1 | 58.788 | 165 | 45 | 4 | 1 | 151 | 1 | 156 | 3.77e-44 | 153 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579360 | A0A396IB81 | 58.788 | 165 | 45 | 4 | 1 | 151 | 1 | 156 | 1.80e-44 | 153 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0058370 | Msa0579360 | -0.800494 | 1.403532e-48 | -8.615850e-47 |
| Msa0197050 | Msa0579360 | -0.854693 | 1.038712e-61 | -8.615850e-47 |
| Msa0388200 | Msa0579360 | 0.801144 | 1.034061e-48 | -8.615850e-47 |
| Msa0420430 | Msa0579360 | -0.815525 | 8.843103e-52 | -8.615850e-47 |
| Msa0453280 | Msa0579360 | 0.801930 | 7.136836e-49 | -8.615850e-47 |
| Msa0271500 | Msa0579360 | -0.811302 | 7.493944e-51 | -8.615850e-47 |
| Msa0276730 | Msa0579360 | -0.812385 | 4.354066e-51 | -8.615850e-47 |
| Msa0316630 | Msa0579360 | -0.825752 | 3.950133e-54 | -8.615850e-47 |
| Msa0336430 | Msa0579360 | -0.828811 | 7.306131e-55 | -8.615850e-47 |
| Msa0336520 | Msa0579360 | -0.821630 | 3.645025e-53 | -8.615850e-47 |
| Msa0501510 | Msa0579360 | 0.845983 | 2.888685e-59 | -8.615850e-47 |
| Msa0521570 | Msa0579360 | 0.802434 | 5.620677e-49 | -8.615850e-47 |
| Msa0521940 | Msa0579360 | -0.811056 | 8.471659e-51 | -8.615850e-47 |
| Msa0536410 | Msa0579360 | -0.818836 | 1.592215e-52 | -8.615850e-47 |
| Msa0549540 | Msa0579360 | 0.814218 | 1.722680e-51 | -8.615850e-47 |
| Msa0557850 | Msa0579360 | -0.819148 | 1.352011e-52 | -8.615850e-47 |
| Msa0560570 | Msa0579360 | -0.802933 | 4.434390e-49 | -8.615850e-47 |
| Msa0563970 | Msa0579360 | -0.806753 | 7.059198e-50 | -8.615850e-47 |
| Msa0579350 | Msa0579360 | 0.831084 | 2.039347e-55 | -8.615850e-47 |
| Msa0579360 | Msa0580540 | 0.808219 | 3.448304e-50 | -8.615850e-47 |
| Msa0579360 | Msa0592510 | -0.861481 | 9.952894e-64 | -8.615850e-47 |
| Msa0579360 | Msa0604880 | 0.808984 | 2.367084e-50 | -8.615850e-47 |
| Msa0579360 | Msa0614980 | 0.955744 | 1.495111e-113 | -8.615850e-47 |
| Msa0579360 | Msa0621780 | 0.809393 | 1.934772e-50 | -8.615850e-47 |
| Msa0579360 | Msa0629440 | -0.800278 | 1.553598e-48 | -8.615850e-47 |
| Msa0579360 | Msa0650640 | 0.970879 | 2.717890e-132 | -8.615850e-47 |
| Msa0579360 | Msa0653160 | -0.803103 | 4.090017e-49 | -8.615850e-47 |
| Msa0579360 | Msa0713210 | 0.857080 | 2.081956e-62 | -8.615850e-47 |
| Msa0579360 | Msa0713220 | 0.816894 | 4.370816e-52 | -8.615850e-47 |
| Msa0579360 | Msa0713230 | 0.842197 | 2.996247e-58 | -8.615850e-47 |
| Msa0579360 | Msa0715510 | -0.842446 | 2.573679e-58 | -8.615850e-47 |
| Msa0579360 | Msa0742090 | 0.804037 | 2.617968e-49 | -8.615850e-47 |
| Msa0579360 | Msa0754350 | 0.805517 | 1.285070e-49 | -8.615850e-47 |
| Msa0579360 | Msa0755080 | 0.828131 | 1.065914e-54 | -8.615850e-47 |
| Msa0579360 | Msa0793100 | 0.831474 | 1.635676e-55 | -8.615850e-47 |
| Msa0579360 | Msa0795710 | 0.809976 | 1.449678e-50 | -8.615850e-47 |
| Msa0579360 | Msa0797000 | 0.819072 | 1.407495e-52 | -8.615850e-47 |
| Msa0579360 | Msa0833450 | 0.803857 | 2.853025e-49 | -8.615850e-47 |
| Msa0579360 | Msa0834450 | 0.824780 | 6.705055e-54 | -8.615850e-47 |
| Msa0579360 | Msa0929900 | -0.806428 | 8.267141e-50 | -8.615850e-47 |
| Msa0579360 | Msa0930950 | 0.830045 | 3.663730e-55 | -8.615850e-47 |
| Msa0579360 | Msa0964580 | 0.801723 | 7.871227e-49 | -8.615850e-47 |
| Msa0579360 | Msa1008850 | -0.800253 | 1.572043e-48 | -8.615850e-47 |
| Msa0579360 | Msa1033420 | -0.833345 | 5.625868e-56 | -8.615850e-47 |
| Msa0579360 | Msa1046120 | -0.803299 | 3.725128e-49 | -8.615850e-47 |
| Msa0579360 | Msa1053690 | 0.827468 | 1.538524e-54 | -8.615850e-47 |
| Msa0579360 | Msa1073060 | -0.849815 | 2.538172e-60 | -8.615850e-47 |
| Msa0579360 | Msa1091050 | -0.812615 | 3.877929e-51 | -8.615850e-47 |
| Msa0579360 | Msa1133970 | -0.813789 | 2.142651e-51 | -8.615850e-47 |
| Msa0579360 | Msa1134040 | -0.812799 | 3.534749e-51 | -8.615850e-47 |
| Msa0579360 | Msa1160780 | -0.867912 | 9.642270e-66 | -8.615850e-47 |
| Msa0579360 | Msa1257100 | 0.800994 | 1.109851e-48 | -8.615850e-47 |
| Msa0579360 | Msa1278030 | -0.801325 | 9.495098e-49 | -8.615850e-47 |
| Msa0579360 | Msa1288970 | 0.808791 | 2.604124e-50 | -8.615850e-47 |
| Msa0579360 | Msa1349810 | 0.806926 | 6.488727e-50 | -8.615850e-47 |
| Msa0579360 | Msa1349850 | 0.823567 | 1.292357e-53 | -8.615850e-47 |
| Msa0579360 | Msa1354090 | 0.809673 | 1.684243e-50 | -8.615850e-47 |
| Msa0579360 | Msa1356180 | 0.810792 | 9.663261e-51 | -8.615850e-47 |
| Msa0579360 | Msa1363690 | -0.826609 | 2.469288e-54 | -8.615850e-47 |
| Msa0579360 | Msa1373390 | 0.802193 | 6.302166e-49 | -8.615850e-47 |
| Msa0579360 | Msa1387520 | 0.800438 | 1.441350e-48 | -8.615850e-47 |
| Msa0579360 | Msa1396550 | -0.825632 | 4.216835e-54 | -8.615850e-47 |
| Msa0579360 | Msa1406990 | 0.800336 | 1.512156e-48 | -8.615850e-47 |
| Msa0579360 | Msa1454410 | -0.831223 | 1.885740e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0579360 | MtrunA17_Chr4g0042971 | 58.788 | 165 | 45 | 4 | 1 | 151 | 1 | 156 | 3.47e-48 | 153 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 494 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGGTAGAAACTTATT+TGG | 0.193374 | 4_1:+84012487 | None:intergenic |
| AGACTTGAACTGTTATTTAT+AGG | 0.194286 | 4_1:+84005261 | None:intergenic |
| CACACCTGCTTCTTCGGTTT+TGG | 0.199931 | 4_1:+84012306 | None:intergenic |
| GTTTCTACCAAGTGAGGTTT+TGG | 0.234806 | 4_1:-84012479 | Msa0579360:CDS |
| TCGGGTTTGGCTGGCTCTTC+TGG | 0.238096 | 4_1:+84010021 | None:intergenic |
| TTTGGCTGGCTCTTCTGGTT+TGG | 0.325140 | 4_1:+84010026 | None:intergenic |
| ATCAAGCACACCTGCTTCTT+CGG | 0.347454 | 4_1:+84012300 | None:intergenic |
| TTTGGCAGGCTCCACAGGTT+TGG | 0.367487 | 4_1:+84012324 | None:intergenic |
| CTGGCTCTTCTGGTTTGGAC+TGG | 0.372877 | 4_1:+84010031 | None:intergenic |
| ACCAATCACACCTTCGGGTT+TGG | 0.373855 | 4_1:+84010008 | None:intergenic |
| AGCACCACCAATCACACCTT+CGG | 0.387425 | 4_1:+84010002 | None:intergenic |
| CAGTTGTAGAGCAAATTGAT+AGG | 0.431190 | 4_1:-84012366 | Msa0579360:CDS |
| GCTTCAGCACAAACAACTAT+AGG | 0.435825 | 4_1:-84010117 | Msa0579360:CDS |
| GCACCACCAATCACACCTTC+GGG | 0.442267 | 4_1:+84010003 | None:intergenic |
| AAAGAAACAATGGCATCAAC+TGG | 0.442857 | 4_1:-84010180 | Msa0579360:intron |
| ATCACACCTTCGGGTTTGGC+TGG | 0.446616 | 4_1:+84010012 | None:intergenic |
| GCCAAACCCGAAGGTGTGAT+TGG | 0.484923 | 4_1:-84010009 | Msa0579360:CDS |
| CTGGACAAAATCAGCAGCCT+TGG | 0.492880 | 4_1:+84010050 | None:intergenic |
| GAAGAAGCAGGTGTGCTTGA+TGG | 0.500199 | 4_1:-84012298 | Msa0579360:intron |
| GCACTCCCCAAAACCTCACT+TGG | 0.541506 | 4_1:+84012472 | None:intergenic |
| CCTGCCAAAACCGAAGAAGC+AGG | 0.546448 | 4_1:-84012310 | Msa0579360:CDS |
| GAATCAGCACAAACAACGGT+AGG | 0.546825 | 4_1:-84012436 | Msa0579360:CDS |
| CAAACAACGGTAGGGAAACA+AGG | 0.547166 | 4_1:-84012427 | Msa0579360:CDS |
| AAATAAGTTTCTACCAAGTG+AGG | 0.567992 | 4_1:-84012485 | Msa0579360:CDS |
| AGTTGTAGAGCAAATTGATA+GGG | 0.586465 | 4_1:-84012365 | Msa0579360:CDS |
| TTATGTTCATTCCAAACCTG+TGG | 0.590330 | 4_1:-84012335 | Msa0579360:CDS |
| TTCAAACAACAAAGAAACAA+TGG | 0.595371 | 4_1:-84010190 | Msa0579360:intron |
| CTTGGTAGCATACTCTCCTA+CGG | 0.606883 | 4_1:+84010068 | None:intergenic |
| AAGGTTGCAACTTCTGCAGA+GGG | 0.615194 | 4_1:-84012400 | Msa0579360:CDS |
| GAAGAGCCAGCCAAACCCGA+AGG | 0.622241 | 4_1:-84010018 | Msa0579360:CDS |
| CGTAGGAGAGTATGCTACCA+AGG | 0.632082 | 4_1:-84010067 | Msa0579360:CDS |
| GAAGGTTGCAACTTCTGCAG+AGG | 0.640521 | 4_1:-84012401 | Msa0579360:CDS |
| GCTAATGTTCAGAAGACCGT+AGG | 0.649202 | 4_1:-84010084 | Msa0579360:CDS |
| AATCAGCACAAACAACGGTA+GGG | 0.654805 | 4_1:-84012435 | Msa0579360:CDS |
| GGTAGGGAAACAAGGTGAGA+AGG | 0.656228 | 4_1:-84012419 | Msa0579360:CDS |
| AAACCCGAAGGTGTGATTGG+TGG | 0.660272 | 4_1:-84010006 | Msa0579360:CDS |
| AGCAGAATCAGCACAAACAA+CGG | 0.662614 | 4_1:-84012440 | Msa0579360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTCTTTTTTAAGAAAAAA+TGG | + | chr4_1:84006990-84007009 | None:intergenic | 10.0% |
| !!! | TTTTTCTAATATATTATTTG+AGG | + | chr4_1:84007336-84007355 | None:intergenic | 10.0% |
| !! | TGTATATTAATAGAAAAATA+TGG | - | chr4_1:84007431-84007450 | Msa0579360:intron | 10.0% |
| !!! | AAATTTGATTATATTTTACT+AGG | + | chr4_1:84008136-84008155 | None:intergenic | 10.0% |
| !!! | ATATTTATATTGACATATTT+TGG | - | chr4_1:84008692-84008711 | Msa0579360:intron | 10.0% |
| !!! | CTTTATATGTATTTTTATTT+AGG | + | chr4_1:84009294-84009313 | None:intergenic | 10.0% |
| !! | TGATAATATGTATATAAAAA+AGG | + | chr4_1:84009368-84009387 | None:intergenic | 10.0% |
| !! | AAAGATTAATCATTATTAAA+CGG | + | chr4_1:84009744-84009763 | None:intergenic | 10.0% |
| !! | AATTTGTAACAATAATTTAA+GGG | + | chr4_1:84012222-84012241 | None:intergenic | 10.0% |
| !!! | TAATTTGTAACAATAATTTA+AGG | + | chr4_1:84012223-84012242 | None:intergenic | 10.0% |
| !! | ATTAATTAAAAAATAATGAG+TGG | - | chr4_1:84012320-84012339 | Msa0579360:CDS | 10.0% |
| !! | TATTTGATATTATTTATGTA+TGG | - | chr4_1:84012421-84012440 | Msa0579360:CDS | 10.0% |
| !! | ATTTGATATTATTTATGTAT+GGG | - | chr4_1:84012422-84012441 | Msa0579360:CDS | 10.0% |
| !!! | TAAGAAACAATTAACTTTTT+TGG | + | chr4_1:84006104-84006123 | None:intergenic | 15.0% |
| !!! | GTTAATTGTTTCTTATAATA+AGG | - | chr4_1:84006109-84006128 | Msa0579360:intron | 15.0% |
| !! | TATTGTATTGAAAAATGAAA+TGG | - | chr4_1:84006247-84006266 | Msa0579360:intron | 15.0% |
| !! | ATACCTAAAAAAACAATATT+TGG | - | chr4_1:84006617-84006636 | Msa0579360:intron | 15.0% |
| !!! | AATCCAAATATTGTTTTTTT+AGG | + | chr4_1:84006623-84006642 | None:intergenic | 15.0% |
| !!! | ATAATATTTTATGTGGTTTT+AGG | - | chr4_1:84006960-84006979 | Msa0579360:intron | 15.0% |
| !!! | TAATATTTTATGTGGTTTTA+GGG | - | chr4_1:84006961-84006980 | Msa0579360:intron | 15.0% |
| !! | AAAGAAAAAAAAAAAAGGAA+TGG | - | chr4_1:84007002-84007021 | Msa0579360:intron | 15.0% |
| !! | AAGAAAAAAAAAAAAGGAAT+GGG | - | chr4_1:84007003-84007022 | Msa0579360:intron | 15.0% |
| !! | ATGCATTAAAATACATAATA+AGG | + | chr4_1:84007296-84007315 | None:intergenic | 15.0% |
| !!! | AAAATTACACATTTTCAAAT+AGG | - | chr4_1:84007471-84007490 | Msa0579360:intron | 15.0% |
| !!! | TCAAATTTTTAGTGATATAT+TGG | - | chr4_1:84008148-84008167 | Msa0579360:intron | 15.0% |
| !! | TAGTAAATAAAGCAAAATTA+GGG | + | chr4_1:84008211-84008230 | None:intergenic | 15.0% |
| !! | TTTAAACAAACTATAAAATG+AGG | + | chr4_1:84008312-84008331 | None:intergenic | 15.0% |
| !!! | ATCATGTATAAATGAAATTT+TGG | - | chr4_1:84008496-84008515 | Msa0579360:intron | 15.0% |
| !! | GATTTATGAAATTGTATTTA+TGG | + | chr4_1:84008975-84008994 | None:intergenic | 15.0% |
| !! | AATAAGATAGTAAATAGAAT+TGG | + | chr4_1:84009198-84009217 | None:intergenic | 15.0% |
| !!! | TTTATGTGATTTTTTTTCTT+TGG | + | chr4_1:84009325-84009344 | None:intergenic | 15.0% |
| !! | AAATAAAATGAAAGATTCAA+AGG | - | chr4_1:84010343-84010362 | Msa0579360:intron | 15.0% |
| !!! | ACAATACTAAATTTTTTGAA+AGG | - | chr4_1:84010762-84010781 | Msa0579360:intron | 15.0% |
| !!! | CAATACTAAATTTTTTGAAA+GGG | - | chr4_1:84010763-84010782 | Msa0579360:intron | 15.0% |
| !! | TAATATCAAATAATACAGTA+GGG | + | chr4_1:84012413-84012432 | None:intergenic | 15.0% |
| !! | ATAATATCAAATAATACAGT+AGG | + | chr4_1:84012414-84012433 | None:intergenic | 15.0% |
| !! | AGCATCTTGATTAATTAATA+AGG | - | chr4_1:84005540-84005559 | Msa0579360:intron | 20.0% |
| !! | TATCTTATCATGTAATCTAT+AGG | - | chr4_1:84005602-84005621 | Msa0579360:intron | 20.0% |
| !!! | ACTTTAAAACATAAACAAAC+AGG | + | chr4_1:84005711-84005730 | None:intergenic | 20.0% |
| !! | GTACTAATTAGAGTTATAAA+AGG | - | chr4_1:84006208-84006227 | Msa0579360:intron | 20.0% |
| !!! | TGAACTCATAATATTTTATG+TGG | - | chr4_1:84006953-84006972 | Msa0579360:intron | 20.0% |
| !!! | AATATTTTATGTGGTTTTAG+GGG | - | chr4_1:84006962-84006981 | Msa0579360:intron | 20.0% |
| !! | AGAAAAAAAAAAAAGGAATG+GGG | - | chr4_1:84007004-84007023 | Msa0579360:intron | 20.0% |
| !! | CATACATAAATAATACAGTA+GGG | + | chr4_1:84007151-84007170 | None:intergenic | 20.0% |
| !! | TCATACATAAATAATACAGT+AGG | + | chr4_1:84007152-84007171 | None:intergenic | 20.0% |
| !!! | GTTGAAGATTTTAATAATGT+GGG | + | chr4_1:84007189-84007208 | None:intergenic | 20.0% |
| !! | AACTTATACACATACTTAAA+GGG | + | chr4_1:84007904-84007923 | None:intergenic | 20.0% |
| !! | TAACTTATACACATACTTAA+AGG | + | chr4_1:84007905-84007924 | None:intergenic | 20.0% |
| !! | ATAAATTATGCAACAGAATT+AGG | + | chr4_1:84008015-84008034 | None:intergenic | 20.0% |
| !!! | TTTGATTATATTTTACTAGG+AGG | + | chr4_1:84008133-84008152 | None:intergenic | 20.0% |
| !! | CTAGTAAATAAAGCAAAATT+AGG | + | chr4_1:84008212-84008231 | None:intergenic | 20.0% |
| !!! | TTTGTTCAAACTTAGAATTT+TGG | - | chr4_1:84008240-84008259 | Msa0579360:intron | 20.0% |
| !!! | CATATCATTTAAGTGTTATT+GGG | - | chr4_1:84008285-84008304 | Msa0579360:intron | 20.0% |
| !! | TAATCTAAAAATGAACAAAG+TGG | + | chr4_1:84008466-84008485 | None:intergenic | 20.0% |
| !! | GAACAAAAAATTTGTAACTT+TGG | - | chr4_1:84008551-84008570 | Msa0579360:intron | 20.0% |
| !!! | ACATTTTGGATTATATAAAC+CGG | + | chr4_1:84008634-84008653 | None:intergenic | 20.0% |
| !!! | TTTTGTACAATTTGGATATT+TGG | + | chr4_1:84008935-84008954 | None:intergenic | 20.0% |
| !!! | TTAAGTACTTTTGTACAATT+TGG | + | chr4_1:84008943-84008962 | None:intergenic | 20.0% |
| !!! | AATTGTACAAAAGTACTTAA+AGG | - | chr4_1:84008943-84008962 | Msa0579360:intron | 20.0% |
| !! | ATACAATTTCATAAATCTAC+TGG | - | chr4_1:84008978-84008997 | Msa0579360:intron | 20.0% |
| !! | TACAATTTCATAAATCTACT+GGG | - | chr4_1:84008979-84008998 | Msa0579360:intron | 20.0% |
| !!! | TATCTTATTATGTTCTCTTT+TGG | - | chr4_1:84009209-84009228 | Msa0579360:intron | 20.0% |
| !!! | TAAGAAGTGTATATAGTAAT+AGG | - | chr4_1:84009428-84009447 | Msa0579360:intron | 20.0% |
| !!! | AAGAAGTGTATATAGTAATA+GGG | - | chr4_1:84009429-84009448 | Msa0579360:intron | 20.0% |
| !!! | AAAATTTTATATCGAGAACA+TGG | + | chr4_1:84009716-84009735 | None:intergenic | 20.0% |
| !! | ATAATGATTAATCTTTGTTG+AGG | - | chr4_1:84009748-84009767 | Msa0579360:intron | 20.0% |
| !! | AATCCATTAATAAATGTGAA+TGG | - | chr4_1:84009980-84009999 | Msa0579360:intron | 20.0% |
| !!! | GATCATCTCAAATTATATTT+TGG | + | chr4_1:84010152-84010171 | None:intergenic | 20.0% |
| !! | TCCATAGAAAAATGAAAATT+GGG | - | chr4_1:84010206-84010225 | Msa0579360:intron | 20.0% |
| !!! | TCTTTTAAAATGAAAGAGTT+TGG | - | chr4_1:84010247-84010266 | Msa0579360:intron | 20.0% |
| !!! | AAAGAATCTAAAATGTACAA+TGG | - | chr4_1:84010573-84010592 | Msa0579360:intron | 20.0% |
| !! | AAAAATTTAGTATTGTTGCT+TGG | + | chr4_1:84010758-84010777 | None:intergenic | 20.0% |
| !! | AGATAACCTATAATAAGAAT+TGG | + | chr4_1:84010829-84010848 | None:intergenic | 20.0% |
| !! | TATGGATATATTCGTTATAT+CGG | + | chr4_1:84011325-84011344 | None:intergenic | 20.0% |
| !! | ATAACGAATATATCCATAAA+AGG | - | chr4_1:84011327-84011346 | Msa0579360:intron | 20.0% |
| !! | TAACGAATATATCCATAAAA+GGG | - | chr4_1:84011328-84011347 | Msa0579360:intron | 20.0% |
| !! | TAACGAATATATCCATAAAA+GGG | + | chr4_1:84011328-84011347 | None:intergenic | 20.0% |
| !! | ATAACGAATATATCCATAAA+AGG | + | chr4_1:84011327-84011346 | None:intergenic | 20.0% |
| !! | GATTGTCAATATTTCATTAA+GGG | - | chr4_1:84011656-84011675 | Msa0579360:intron | 20.0% |
| !! | TTTCTTTATTGTGATTTACT+GGG | + | chr4_1:84012135-84012154 | None:intergenic | 20.0% |
| !!! | TTTTCTTTATTGTGATTTAC+TGG | + | chr4_1:84012136-84012155 | None:intergenic | 20.0% |
| ! | ACAATCAATACTTAAAGAGA+TGG | + | chr4_1:84005578-84005597 | None:intergenic | 25.0% |
| ! | TATCATGTAATCTATAGGAT+AGG | - | chr4_1:84005607-84005626 | Msa0579360:intron | 25.0% |
| !! | TTGTTTCTTATAATAAGGAC+CGG | - | chr4_1:84006114-84006133 | Msa0579360:intron | 25.0% |
| ! | TGCAAATGGTTCAATTATTA+TGG | - | chr4_1:84006295-84006314 | Msa0579360:intron | 25.0% |
| ! | GCAAATGGTTCAATTATTAT+GGG | - | chr4_1:84006296-84006315 | Msa0579360:intron | 25.0% |
| !! | CTTTTCTACAATTATATGCA+GGG | + | chr4_1:84006383-84006402 | None:intergenic | 25.0% |
| !! | ACTTTTCTACAATTATATGC+AGG | + | chr4_1:84006384-84006403 | None:intergenic | 25.0% |
| ! | AAAATGAAATCATGAGTTCA+TGG | + | chr4_1:84006920-84006939 | None:intergenic | 25.0% |
| !!! | ATATTTTATGTGGTTTTAGG+GGG | - | chr4_1:84006963-84006982 | Msa0579360:intron | 25.0% |
| ! | GAACCACAAAAAAGAAAAAA+TGG | + | chr4_1:84007031-84007050 | None:intergenic | 25.0% |
| ! | CTGTATTATTTATGTATGAG+TGG | - | chr4_1:84007153-84007172 | Msa0579360:intron | 25.0% |
| ! | TATTTATGTATGAGTGGATA+TGG | - | chr4_1:84007159-84007178 | Msa0579360:intron | 25.0% |
| !!! | GGTTGAAGATTTTAATAATG+TGG | + | chr4_1:84007190-84007209 | None:intergenic | 25.0% |
| !! | AATCAGTAGATATTTTCTCT+TGG | - | chr4_1:84007212-84007231 | Msa0579360:intron | 25.0% |
| ! | TCAACTGTGTCAAATATTAT+TGG | + | chr4_1:84007273-84007292 | None:intergenic | 25.0% |
| ! | TGAATCTATGAATGATGATA+GGG | + | chr4_1:84007563-84007582 | None:intergenic | 25.0% |
| ! | ATGAATCTATGAATGATGAT+AGG | + | chr4_1:84007564-84007583 | None:intergenic | 25.0% |
| ! | TTCAAACAACAAAGAAACAA+TGG | - | chr4_1:84007588-84007607 | Msa0579360:intron | 25.0% |
| ! | AAGAGAACAAAATAAGAGAA+AGG | + | chr4_1:84008053-84008072 | None:intergenic | 25.0% |
| !!! | TCTCTTATTTTGTTCTCTTT+TGG | - | chr4_1:84008054-84008073 | Msa0579360:intron | 25.0% |
| ! | GCATATCATTTAAGTGTTAT+TGG | - | chr4_1:84008284-84008303 | Msa0579360:intron | 25.0% |
| !! | AAACACATATTTTACACATG+CGG | + | chr4_1:84008728-84008747 | None:intergenic | 25.0% |
| ! | GTTATGTTTGTGTTACAATT+TGG | + | chr4_1:84008763-84008782 | None:intergenic | 25.0% |
| ! | TAGTTCAACAATAATCGATA+CGG | + | chr4_1:84008800-84008819 | None:intergenic | 25.0% |
| ! | AAAGAAACATAAACAAACAG+GGG | + | chr4_1:84009162-84009181 | None:intergenic | 25.0% |
| ! | CAAAGAAACATAAACAAACA+GGG | + | chr4_1:84009163-84009182 | None:intergenic | 25.0% |
| ! | AGATAAAGAACAAAACACTT+AGG | + | chr4_1:84009514-84009533 | None:intergenic | 25.0% |
| ! | AATTGAAGTTACCATGTTAT+CGG | - | chr4_1:84009654-84009673 | Msa0579360:intron | 25.0% |
| !!! | TAAGTTTTATACCGATAACA+TGG | + | chr4_1:84009668-84009687 | None:intergenic | 25.0% |
| ! | GATTAATCATTATTAAACGG+CGG | + | chr4_1:84009741-84009760 | None:intergenic | 25.0% |
| ! | AATCTTTGTTGAGGAATATA+TGG | - | chr4_1:84009757-84009776 | Msa0579360:intron | 25.0% |
| ! | ATCTTTGTTGAGGAATATAT+GGG | - | chr4_1:84009758-84009777 | Msa0579360:intron | 25.0% |
| ! | GTACCATTCACATTTATTAA+TGG | + | chr4_1:84009986-84010005 | None:intergenic | 25.0% |
| !! | ACCAAATTTGAGATGTTTAT+AGG | - | chr4_1:84010078-84010097 | Msa0579360:CDS | 25.0% |
| !! | CCAAATTTGAGATGTTTATA+GGG | - | chr4_1:84010079-84010098 | Msa0579360:CDS | 25.0% |
| !!! | CACTTCGGTTATATTTTTAA+GGG | + | chr4_1:84010122-84010141 | None:intergenic | 25.0% |
| !!! | ACACTTCGGTTATATTTTTA+AGG | + | chr4_1:84010123-84010142 | None:intergenic | 25.0% |
| ! | TAAAAATATAACCGAAGTGT+TGG | - | chr4_1:84010123-84010142 | Msa0579360:CDS | 25.0% |
| ! | TTGAGATGATCATACAAAAA+TGG | - | chr4_1:84010161-84010180 | Msa0579360:CDS | 25.0% |
| !!! | TTTTTCTATGGACTATTTTG+AGG | + | chr4_1:84010198-84010217 | None:intergenic | 25.0% |
| ! | GTCCATAGAAAAATGAAAAT+TGG | - | chr4_1:84010205-84010224 | Msa0579360:intron | 25.0% |
| !!! | TCCCAATTTTCATTTTTCTA+TGG | + | chr4_1:84010210-84010229 | None:intergenic | 25.0% |
| ! | ACCTATCAATAATAACATTC+AGG | - | chr4_1:84010309-84010328 | Msa0579360:intron | 25.0% |
| ! | TCCTGAATGTTATTATTGAT+AGG | + | chr4_1:84010313-84010332 | None:intergenic | 25.0% |
| !!! | TTTGAGTGGTTATTTTAGTT+GGG | + | chr4_1:84010393-84010412 | None:intergenic | 25.0% |
| !!! | TTTTAATCTTTGGGTTTTTC+CGG | + | chr4_1:84010438-84010457 | None:intergenic | 25.0% |
| !!! | CTTGATAGGTTTTAATCTTT+GGG | + | chr4_1:84010447-84010466 | None:intergenic | 25.0% |
| ! | AAGCAAGAATAAAAACAACA+AGG | - | chr4_1:84010481-84010500 | Msa0579360:intron | 25.0% |
| !!! | AAAAAAACTTGTTAGTCCAT+TGG | - | chr4_1:84010647-84010666 | Msa0579360:intron | 25.0% |
| !! | AATTCTCATATTTTCAGAGA+GGG | + | chr4_1:84010678-84010697 | None:intergenic | 25.0% |
| !! | GCATAGATTTTCATAGATAA+AGG | + | chr4_1:84010938-84010957 | None:intergenic | 25.0% |
| !!! | TTTAAGAGTTTTATTTCTCC+AGG | + | chr4_1:84011076-84011095 | None:intergenic | 25.0% |
| ! | TATGGATATATTCGTTATAC+CGG | - | chr4_1:84011447-84011466 | Msa0579360:intron | 25.0% |
| ! | CAGATAATACATTAACATAG+AGG | + | chr4_1:84011561-84011580 | None:intergenic | 25.0% |
| ! | GGATTGTCAATATTTCATTA+AGG | - | chr4_1:84011655-84011674 | Msa0579360:intron | 25.0% |
| !! | ATGTCTTGAGAATGATTTTA+AGG | + | chr4_1:84011880-84011899 | None:intergenic | 25.0% |
| ! | GAGTACAATATAGAAAACTA+GGG | + | chr4_1:84011920-84011939 | None:intergenic | 25.0% |
| ! | TGAGTACAATATAGAAAACT+AGG | + | chr4_1:84011921-84011940 | None:intergenic | 25.0% |
| ! | AAATTATTTGACAGTACTTG+CGG | + | chr4_1:84011944-84011963 | None:intergenic | 25.0% |
| ! | TATCATTTGGTATTGTAGAA+AGG | + | chr4_1:84011971-84011990 | None:intergenic | 25.0% |
| ! | TCATTGTGATCAATATCATT+TGG | + | chr4_1:84011984-84012003 | None:intergenic | 25.0% |
| !!! | TTGAGGTTTTAAGTAAATCT+AGG | + | chr4_1:84012044-84012063 | None:intergenic | 25.0% |
| ! | TTCCATTTCTATTATACAGT+TGG | + | chr4_1:84012091-84012110 | None:intergenic | 25.0% |
| ! | CTTTATATATTCTTCATGCT+TGG | - | chr4_1:84012158-84012177 | Msa0579360:intron | 25.0% |
| ! | CAAATTATATTCTTAGCCAA+AGG | - | chr4_1:84012236-84012255 | Msa0579360:intron | 25.0% |
| ! | GTTAGTTAGTACTCTATTTA+AGG | + | chr4_1:84012297-84012316 | None:intergenic | 25.0% |
| ! | AAATAATGAGTGGTAGTTAA+AGG | - | chr4_1:84012330-84012349 | Msa0579360:CDS | 25.0% |
| ! | CAAACAGTACTATATTTCAA+AGG | - | chr4_1:84012378-84012397 | Msa0579360:CDS | 25.0% |
| !!! | TGTAGTTGGAGATTTTAATA+CGG | + | chr4_1:84012462-84012481 | None:intergenic | 25.0% |
| ! | TTGCAAAGAGAAAATATCTA+CGG | + | chr4_1:84012489-84012508 | None:intergenic | 25.0% |
| TCACTTGGTAGAAACTTATT+TGG | + | chr4_1:84005294-84005313 | None:intergenic | 30.0% | |
| AAATAAGTTTCTACCAAGTG+AGG | - | chr4_1:84005293-84005312 | Msa0579360:intron | 30.0% | |
| AGTTGTAGAGCAAATTGATA+GGG | - | chr4_1:84005413-84005432 | Msa0579360:intron | 30.0% | |
| TAAAGTGGAACCTTACATAT+TGG | + | chr4_1:84005666-84005685 | None:intergenic | 30.0% | |
| !! | TGTTGATTCAAACTGTAAAG+TGG | + | chr4_1:84005681-84005700 | None:intergenic | 30.0% |
| AACCCACTTTATTAATCCTT+TGG | - | chr4_1:84005859-84005878 | Msa0579360:intron | 30.0% | |
| TGCCAAAGGATTAATAAAGT+GGG | + | chr4_1:84005864-84005883 | None:intergenic | 30.0% | |
| ATGCCAAAGGATTAATAAAG+TGG | + | chr4_1:84005865-84005884 | None:intergenic | 30.0% | |
| TGAGTAAGTAATCTCGAAAA+AGG | - | chr4_1:84005884-84005903 | Msa0579360:intron | 30.0% | |
| ACCTAAAAAGTCAACTTTGA+GGG | + | chr4_1:84006019-84006038 | None:intergenic | 30.0% | |
| AACCTAAAAAGTCAACTTTG+AGG | + | chr4_1:84006020-84006039 | None:intergenic | 30.0% | |
| CCACTTTACATTTATGATAG+TGG | + | chr4_1:84006160-84006179 | None:intergenic | 30.0% | |
| CCACTATCATAAATGTAAAG+TGG | - | chr4_1:84006157-84006176 | Msa0579360:intron | 30.0% | |
| ! | ATGAAATGGCTCAGTTATTT+TGG | - | chr4_1:84006261-84006280 | Msa0579360:intron | 30.0% |
| !! | TGAAATGGCTCAGTTATTTT+GGG | - | chr4_1:84006262-84006281 | Msa0579360:intron | 30.0% |
| !!! | TGGGACATTTTTTTTGCAAA+TGG | - | chr4_1:84006281-84006300 | Msa0579360:intron | 30.0% |
| ATGGTTCAATTATTATGGGA+CGG | - | chr4_1:84006300-84006319 | Msa0579360:intron | 30.0% | |
| ATAACAAGTTTAGCAGTATG+TGG | - | chr4_1:84006491-84006510 | Msa0579360:intron | 30.0% | |
| ! | CAGAGACAAGATGTAATTTT+CGG | - | chr4_1:84006534-84006553 | Msa0579360:intron | 30.0% |
| !! | GAGGATATTTTTGTCAATTG+AGG | - | chr4_1:84006572-84006591 | Msa0579360:intron | 30.0% |
| !!! | GTTCATGGTCTATTTTTTTG+TGG | + | chr4_1:84006905-84006924 | None:intergenic | 30.0% |
| !!! | GGTCCATTTTTTCTTTTTTG+TGG | - | chr4_1:84007025-84007044 | Msa0579360:intron | 30.0% |
| CACTGTTTGTTTATTGATGT+CGG | + | chr4_1:84007110-84007129 | None:intergenic | 30.0% | |
| ! | GAGAAAATATCTACTGATTG+TGG | + | chr4_1:84007211-84007230 | None:intergenic | 30.0% |
| CTGTGTCAAATATTATTGGA+CGG | + | chr4_1:84007269-84007288 | None:intergenic | 30.0% | |
| TTCAAATAGGTCATCTATTG+CGG | - | chr4_1:84007484-84007503 | Msa0579360:intron | 30.0% | |
| GGAAAAACATAAACAATCAG+AGG | + | chr4_1:84007994-84008013 | None:intergenic | 30.0% | |
| ! | AGACATATGTTTTACACATC+CGG | - | chr4_1:84008612-84008631 | Msa0579360:intron | 30.0% |
| TTCTCAATACTGCTGAAAAT+TGG | + | chr4_1:84008673-84008692 | None:intergenic | 30.0% | |
| GCATGTGTAAAATATGTGTT+TGG | - | chr4_1:84008727-84008746 | Msa0579360:intron | 30.0% | |
| TTGATATGTGTGTTGCAATT+AGG | + | chr4_1:84008827-84008846 | None:intergenic | 30.0% | |
| GTAAAGTCATCCAATATGTA+AGG | - | chr4_1:84009099-84009118 | Msa0579360:intron | 30.0% | |
| GCAAAGAAACATAAACAAAC+AGG | + | chr4_1:84009164-84009183 | None:intergenic | 30.0% | |
| TCTTTGTTGAGGAATATATG+GGG | - | chr4_1:84009759-84009778 | Msa0579360:intron | 30.0% | |
| ACTTATAGACAGAAAACAGT+TGG | - | chr4_1:84010016-84010035 | Msa0579360:CDS | 30.0% | |
| CTTATAGACAGAAAACAGTT+GGG | - | chr4_1:84010017-84010036 | Msa0579360:CDS | 30.0% | |
| TTATAGACAGAAAACAGTTG+GGG | - | chr4_1:84010018-84010037 | Msa0579360:CDS | 30.0% | |
| CCCTATAAACATCTCAAATT+TGG | + | chr4_1:84010082-84010101 | None:intergenic | 30.0% | |
| !!! | TTGAGTGGTTATTTTAGTTG+GGG | + | chr4_1:84010392-84010411 | None:intergenic | 30.0% |
| !!! | CTTTGAGTGGTTATTTTAGT+TGG | + | chr4_1:84010394-84010413 | None:intergenic | 30.0% |
| TGCCTCATTAAAAATCTTTC+CGG | - | chr4_1:84010416-84010435 | Msa0579360:intron | 30.0% | |
| ! | TTCCGGAAAGATTTTTAATG+AGG | + | chr4_1:84010421-84010440 | None:intergenic | 30.0% |
| !! | CCTTGATAGGTTTTAATCTT+TGG | + | chr4_1:84010448-84010467 | None:intergenic | 30.0% |
| CCAAAGATTAAAACCTATCA+AGG | - | chr4_1:84010445-84010464 | Msa0579360:intron | 30.0% | |
| ! | TATAGACTTTTCTCCTTGAT+AGG | + | chr4_1:84010461-84010480 | None:intergenic | 30.0% |
| GAATAAAAACAACAAGGAAG+AGG | - | chr4_1:84010487-84010506 | Msa0579360:intron | 30.0% | |
| TTGATGTTGATCTTTGTCAA+GGG | + | chr4_1:84010514-84010533 | None:intergenic | 30.0% | |
| TTCAACAAAATGATTCGACT+TGG | + | chr4_1:84010611-84010630 | None:intergenic | 30.0% | |
| ! | AAGTCGAATCATTTTGTTGA+AGG | - | chr4_1:84010610-84010629 | Msa0579360:intron | 30.0% |
| ! | ATTCTCATATTTTCAGAGAG+GGG | + | chr4_1:84010677-84010696 | None:intergenic | 30.0% |
| ! | GAATTCTCATATTTTCAGAG+AGG | + | chr4_1:84010679-84010698 | None:intergenic | 30.0% |
| ATAAGAATTGGAGTTGGATT+TGG | + | chr4_1:84010817-84010836 | None:intergenic | 30.0% | |
| CCTATAATAAGAATTGGAGT+TGG | + | chr4_1:84010823-84010842 | None:intergenic | 30.0% | |
| CCAACTCCAATTCTTATTAT+AGG | - | chr4_1:84010820-84010839 | Msa0579360:intron | 30.0% | |
| !! | GATAAAGGTGCTAATTATTC+AGG | + | chr4_1:84010923-84010942 | None:intergenic | 30.0% |
| GCTTTAACAATTTCCTAGAT+GGG | + | chr4_1:84011150-84011169 | None:intergenic | 30.0% | |
| TGCTTTAACAATTTCCTAGA+TGG | + | chr4_1:84011151-84011170 | None:intergenic | 30.0% | |
| TTTCTATGAAGGTTCATTGA+TGG | + | chr4_1:84011211-84011230 | None:intergenic | 30.0% | |
| ! | TTAGGGCTATATTTCTATGA+AGG | + | chr4_1:84011222-84011241 | None:intergenic | 30.0% |
| TTCATAGAAATATAGCCCTA+AGG | - | chr4_1:84011221-84011240 | Msa0579360:intron | 30.0% | |
| TCATAGAAATATAGCCCTAA+GGG | - | chr4_1:84011222-84011241 | Msa0579360:intron | 30.0% | |
| ACTCAAGTAATGAGATCTAT+GGG | + | chr4_1:84011405-84011424 | None:intergenic | 30.0% | |
| ACATATCCTTAAAGGTCTTA+GGG | + | chr4_1:84011496-84011515 | None:intergenic | 30.0% | |
| TACATATCCTTAAAGGTCTT+AGG | + | chr4_1:84011497-84011516 | None:intergenic | 30.0% | |
| ! | TAAGACCTTTAAGGATATGT+AGG | - | chr4_1:84011496-84011515 | Msa0579360:intron | 30.0% |
| ATTATCTGCAAGTACATTTG+TGG | - | chr4_1:84011573-84011592 | Msa0579360:intron | 30.0% | |
| !! | AATGGTTTAAGTTAAGTTGG+CGG | + | chr4_1:84011600-84011619 | None:intergenic | 30.0% |
| ! | CGAAATGGTTTAAGTTAAGT+TGG | + | chr4_1:84011603-84011622 | None:intergenic | 30.0% |
| ATATTTCATTAAGGGCTTAC+TGG | - | chr4_1:84011664-84011683 | Msa0579360:intron | 30.0% | |
| !!! | CTTGAGAATGATTTTAAGGT+GGG | + | chr4_1:84011876-84011895 | None:intergenic | 30.0% |
| !! | TCTTGAGAATGATTTTAAGG+TGG | + | chr4_1:84011877-84011896 | None:intergenic | 30.0% |
| CAATATAGAAAACTAGGGTT+TGG | + | chr4_1:84011915-84011934 | None:intergenic | 30.0% | |
| TTAAAACCTCAATCATAGTG+TGG | - | chr4_1:84012052-84012071 | Msa0579360:intron | 30.0% | |
| GTCCAACTGTATAATAGAAA+TGG | - | chr4_1:84012086-84012105 | Msa0579360:intron | 30.0% | |
| ! | GTGATTTACTGGGTAAATTT+TGG | + | chr4_1:84012125-84012144 | None:intergenic | 30.0% |
| AACAATAATTTAAGGGTTCG+AGG | + | chr4_1:84012215-84012234 | None:intergenic | 30.0% | |
| TATTTATGTATGGGTCGATA+TGG | - | chr4_1:84012431-84012450 | Msa0579360:CDS | 30.0% | |
| !! | GTAGTTGGAGATTTTAATAC+GGG | + | chr4_1:84012461-84012480 | None:intergenic | 30.0% |
| ATATCTACGGAAATTGTAGT+TGG | + | chr4_1:84012476-84012495 | None:intergenic | 30.0% | |
| ! | TTTCTACCAAGTGAGGTTTT+GGG | - | chr4_1:84005300-84005319 | Msa0579360:intron | 35.0% |
| CAGTTGTAGAGCAAATTGAT+AGG | - | chr4_1:84005412-84005431 | Msa0579360:intron | 35.0% | |
| TTATGTTCATTCCAAACCTG+TGG | - | chr4_1:84005443-84005462 | Msa0579360:intron | 35.0% | |
| ! | GATGGTGTTAAAAAGACTGT+TGG | - | chr4_1:84005498-84005517 | Msa0579360:intron | 35.0% |
| !! | GATGATGGATCCAATATGTA+AGG | - | chr4_1:84005653-84005672 | Msa0579360:intron | 35.0% |
| AAACATAAACAAACAGGAGC+AGG | + | chr4_1:84005705-84005724 | None:intergenic | 35.0% | |
| AGATTACTTACTCATGCCAA+AGG | + | chr4_1:84005878-84005897 | None:intergenic | 35.0% | |
| GTAAGTAATCTCGAAAAAGG+TGG | - | chr4_1:84005887-84005906 | Msa0579360:intron | 35.0% | |
| AAGAGTCTAGTGAGTTTAGT+GGG | + | chr4_1:84005942-84005961 | None:intergenic | 35.0% | |
| AAAGAGTCTAGTGAGTTTAG+TGG | + | chr4_1:84005943-84005962 | None:intergenic | 35.0% | |
| ! | AAACTCACTAGACTCTTTTG+TGG | - | chr4_1:84005945-84005964 | Msa0579360:intron | 35.0% |
| ! | AACTCACTAGACTCTTTTGT+GGG | - | chr4_1:84005946-84005965 | Msa0579360:intron | 35.0% |
| !! | AAATCCCTAATCGCTTTTGA+GGG | + | chr4_1:84005988-84006007 | None:intergenic | 35.0% |
| !! | AAAATCCCTAATCGCTTTTG+AGG | + | chr4_1:84005989-84006008 | None:intergenic | 35.0% |
| ! | AAAGTCAACTTTGAGGGAAT+AGG | + | chr4_1:84006013-84006032 | None:intergenic | 35.0% |
| !! | TCCCTCAAAGTTGACTTTTT+AGG | - | chr4_1:84006015-84006034 | Msa0579360:intron | 35.0% |
| TTTCTTATAATAAGGACCGG+AGG | - | chr4_1:84006117-84006136 | Msa0579360:intron | 35.0% | |
| TTCTTATAATAAGGACCGGA+GGG | - | chr4_1:84006118-84006137 | Msa0579360:intron | 35.0% | |
| AAATACACAAATACTCCCTC+CGG | + | chr4_1:84006136-84006155 | None:intergenic | 35.0% | |
| TTCAATTATTATGGGACGGA+AGG | - | chr4_1:84006304-84006323 | Msa0579360:intron | 35.0% | |
| TCTACAATTATATGCAGGGA+CGG | + | chr4_1:84006379-84006398 | None:intergenic | 35.0% | |
| ATAACTCGTGATAGATGCAA+GGG | + | chr4_1:84006447-84006466 | None:intergenic | 35.0% | |
| AATAACTCGTGATAGATGCA+AGG | + | chr4_1:84006448-84006467 | None:intergenic | 35.0% | |
| ATCTTGTCTCTGGTCATTAT+CGG | + | chr4_1:84006526-84006545 | None:intergenic | 35.0% | |
| CGAAAATTACATCTTGTCTC+TGG | + | chr4_1:84006536-84006555 | None:intergenic | 35.0% | |
| ! | GTGTTTCTACTTTCTAGCAT+GGG | - | chr4_1:84007067-84007086 | Msa0579360:intron | 35.0% |
| ATAATACAGTAGGGAATACG+TGG | + | chr4_1:84007142-84007161 | None:intergenic | 35.0% | |
| GTCAAATATTATTGGACGGA+AGG | + | chr4_1:84007265-84007284 | None:intergenic | 35.0% | |
| TCAAATAGGTCATCTATTGC+GGG | - | chr4_1:84007485-84007504 | Msa0579360:intron | 35.0% | |
| AAAGAAACAATGGCATCAAC+TGG | - | chr4_1:84007598-84007617 | Msa0579360:intron | 35.0% | |
| !!! | TGGACCCAATAACGATTTTT+TGG | - | chr4_1:84007618-84007637 | Msa0579360:intron | 35.0% |
| CCTGCCAAAAAATCGTTATT+GGG | + | chr4_1:84007625-84007644 | None:intergenic | 35.0% | |
| ACCTGCCAAAAAATCGTTAT+TGG | + | chr4_1:84007626-84007645 | None:intergenic | 35.0% | |
| !! | GGTAATGGATCCAATATGTA+AGG | - | chr4_1:84007934-84007953 | Msa0579360:intron | 35.0% |
| AGCTCTGTTACCTTACATAT+TGG | + | chr4_1:84007947-84007966 | None:intergenic | 35.0% | |
| AAACATAAACAATCAGAGGC+AGG | + | chr4_1:84007990-84008009 | None:intergenic | 35.0% | |
| GTTAAGTTAAAAGAGAGACG+TGG | - | chr4_1:84008262-84008281 | Msa0579360:intron | 35.0% | |
| !! | CGACGCACAATAAGTTTTAA+AGG | - | chr4_1:84008394-84008413 | Msa0579360:intron | 35.0% |
| AACAAAGTGGACGAAAAAGA+AGG | + | chr4_1:84008453-84008472 | None:intergenic | 35.0% | |
| ! | TCATGGGGTTTGATACATTT+TGG | + | chr4_1:84008648-84008667 | None:intergenic | 35.0% |
| AATGCAATGATCTAGATGCT+TGG | - | chr4_1:84009057-84009076 | Msa0579360:intron | 35.0% | |
| ATGCAATGATCTAGATGCTT+GGG | - | chr4_1:84009058-84009077 | Msa0579360:intron | 35.0% | |
| AGCTCTGTTACCTTACATAT+TGG | + | chr4_1:84007947-84007966 | None:intergenic | 35.0% | |
| !!! | ATCTTTTTTGGATGGCGAAA+AGG | - | chr4_1:84009625-84009644 | Msa0579360:intron | 35.0% |
| TAAGCCTAATGACTTAGTTC+TGG | - | chr4_1:84009686-84009705 | Msa0579360:intron | 35.0% | |
| ! | AAGCCTAATGACTTAGTTCT+GGG | - | chr4_1:84009687-84009706 | Msa0579360:intron | 35.0% |
| TAACCCAGAACTAAGTCATT+AGG | + | chr4_1:84009693-84009712 | None:intergenic | 35.0% | |
| AAACAACTGATTGAGAGAGA+GGG | + | chr4_1:84009800-84009819 | None:intergenic | 35.0% | |
| AAAACAACTGATTGAGAGAG+AGG | + | chr4_1:84009801-84009820 | None:intergenic | 35.0% | |
| !!! | TTGTTTTTGACTCTTGCGTA+CGG | + | chr4_1:84009824-84009843 | None:intergenic | 35.0% |
| TATAGACAGAAAACAGTTGG+GGG | - | chr4_1:84010019-84010038 | Msa0579360:CDS | 35.0% | |
| ! | TAAAGATTTCCGGCAAGTTT+TGG | + | chr4_1:84010046-84010065 | None:intergenic | 35.0% |
| ! | TTTGTCCCTCTAAAGATTTC+CGG | + | chr4_1:84010056-84010075 | None:intergenic | 35.0% |
| !! | TATTTTGGATGCCAACACTT+CGG | + | chr4_1:84010137-84010156 | None:intergenic | 35.0% |
| CCAACATAGTTGAGATATCT+TGG | + | chr4_1:84010285-84010304 | None:intergenic | 35.0% | |
| CCAAGATATCTCAACTATGT+TGG | - | chr4_1:84010282-84010301 | Msa0579360:intron | 35.0% | |
| !! | ATGAAAGATTCAAAGGCACT+TGG | - | chr4_1:84010350-84010369 | Msa0579360:intron | 35.0% |
| GTTGATGTTGATCTTTGTCA+AGG | + | chr4_1:84010515-84010534 | None:intergenic | 35.0% | |
| !! | ACAAAATGATTCGACTTGGA+TGG | + | chr4_1:84010607-84010626 | None:intergenic | 35.0% |
| GGTTATGTTAAGAGATGTCT+AGG | + | chr4_1:84010974-84010993 | None:intergenic | 35.0% | |
| ACACTTGACCCAATTAAAGA+TGG | - | chr4_1:84011003-84011022 | Msa0579360:intron | 35.0% | |
| CATAGAAATATAGCCCTAAG+GGG | - | chr4_1:84011223-84011242 | Msa0579360:intron | 35.0% | |
| CTCAAGTAATGAGATCTATG+GGG | + | chr4_1:84011404-84011423 | None:intergenic | 35.0% | |
| CACTCAAGTAATGAGATCTA+TGG | + | chr4_1:84011406-84011425 | None:intergenic | 35.0% | |
| AGATCTCATTACTTGAGTGA+AGG | - | chr4_1:84011407-84011426 | Msa0579360:intron | 35.0% | |
| CTGATCCTACATATCCTTAA+AGG | + | chr4_1:84011504-84011523 | None:intergenic | 35.0% | |
| AGTCTTAAAACAAGGCGAAA+TGG | + | chr4_1:84011618-84011637 | None:intergenic | 35.0% | |
| AGATACGAGAAAGACAGTTT+CGG | + | chr4_1:84011744-84011763 | None:intergenic | 35.0% | |
| AAACTGTCTTTCTCGTATCT+TGG | - | chr4_1:84011744-84011763 | Msa0579360:intron | 35.0% | |
| AACTGTCTTTCTCGTATCTT+GGG | - | chr4_1:84011745-84011764 | Msa0579360:intron | 35.0% | |
| GTATCTTGGGGCTAAATATT+CGG | - | chr4_1:84011758-84011777 | Msa0579360:intron | 35.0% | |
| TTGACCCCTACTTTACATTA+CGG | - | chr4_1:84012015-84012034 | Msa0579360:intron | 35.0% | |
| TAACATCCACACTATGATTG+AGG | + | chr4_1:84012061-84012080 | None:intergenic | 35.0% | |
| AATCATAGTGTGGATGTTAC+TGG | - | chr4_1:84012062-84012081 | Msa0579360:intron | 35.0% | |
| TGAGTGGTAGTTAAAGGAAT+CGG | - | chr4_1:84012336-84012355 | Msa0579360:CDS | 35.0% | |
| GTACTGTTTGCTTCTTATGT+CGG | + | chr4_1:84012368-84012387 | None:intergenic | 35.0% | |
| ATAATACAGTAGGGAATACG+TGG | + | chr4_1:84007142-84007161 | None:intergenic | 35.0% | |
| ! | GTTTCTACCAAGTGAGGTTT+TGG | - | chr4_1:84005299-84005318 | Msa0579360:intron | 40.0% |
| ! | TTCTACCAAGTGAGGTTTTG+GGG | - | chr4_1:84005301-84005320 | Msa0579360:intron | 40.0% |
| AGCAGAATCAGCACAAACAA+CGG | - | chr4_1:84005338-84005357 | Msa0579360:intron | 40.0% | |
| AATCAGCACAAACAACGGTA+GGG | - | chr4_1:84005343-84005362 | Msa0579360:intron | 40.0% | |
| GGTGTTAAAAAGACTGTTGG+AGG | - | chr4_1:84005501-84005520 | Msa0579360:intron | 40.0% | |
| AGTTACCACATGTCTGATGA+TGG | - | chr4_1:84005638-84005657 | Msa0579360:intron | 40.0% | |
| TCTCGAAAAAGGTGGCTTAT+AGG | - | chr4_1:84005895-84005914 | Msa0579360:intron | 40.0% | |
| AAAACCCCTCAAAAGCGATT+AGG | - | chr4_1:84005980-84005999 | Msa0579360:intron | 40.0% | |
| AAACCCCTCAAAAGCGATTA+GGG | - | chr4_1:84005981-84006000 | Msa0579360:intron | 40.0% | |
| !! | AATCCCTAATCGCTTTTGAG+GGG | + | chr4_1:84005987-84006006 | None:intergenic | 40.0% |
| ATCCAGACTTTAGGTACATG+TGG | + | chr4_1:84006356-84006375 | None:intergenic | 40.0% | |
| TCTTGTCTCTGGTCATTATC+GGG | + | chr4_1:84006525-84006544 | None:intergenic | 40.0% | |
| TCGGTCGAAACAGAAAATTG+AGG | - | chr4_1:84006553-84006572 | Msa0579360:intron | 40.0% | |
| AAACACGTGAGACAATGTCA+CGG | + | chr4_1:84007053-84007072 | None:intergenic | 40.0% | |
| ! | CGTGTTTCTACTTTCTAGCA+TGG | - | chr4_1:84007066-84007085 | Msa0579360:intron | 40.0% |
| TATTATTGGACGGAAGGAGA+AGG | + | chr4_1:84007259-84007278 | None:intergenic | 40.0% | |
| !!! | CCCAATAACGATTTTTTGGC+AGG | - | chr4_1:84007622-84007641 | Msa0579360:intron | 40.0% |
| GCTTCAGCACAAACAACTAT+AGG | - | chr4_1:84007661-84007680 | Msa0579360:intron | 40.0% | |
| GTGTATAAGTTAGCACTGTC+TGG | - | chr4_1:84007913-84007932 | Msa0579360:intron | 40.0% | |
| AAGTTAGCACTGTCTGGTAA+TGG | - | chr4_1:84007919-84007938 | Msa0579360:intron | 40.0% | |
| TAAACAATCAGAGGCAGGAT+CGG | + | chr4_1:84007985-84008004 | None:intergenic | 40.0% | |
| !! | AGGCCTATAATTTGTTGGCT+CGG | + | chr4_1:84008351-84008370 | None:intergenic | 40.0% |
| ! | GTGCTAGGCCTATAATTTGT+TGG | + | chr4_1:84008356-84008375 | None:intergenic | 40.0% |
| !! | TGCTGAAAATTGGTGTCATG+GGG | + | chr4_1:84008663-84008682 | None:intergenic | 40.0% |
| !! | CTGCTGAAAATTGGTGTCAT+GGG | + | chr4_1:84008664-84008683 | None:intergenic | 40.0% |
| !! | ACTGCTGAAAATTGGTGTCA+TGG | + | chr4_1:84008665-84008684 | None:intergenic | 40.0% |
| TCTAGATCATTGCATTGCAG+AGG | + | chr4_1:84009053-84009072 | None:intergenic | 40.0% | |
| ATGATCTAGATGCTTGGGAA+TGG | - | chr4_1:84009063-84009082 | Msa0579360:intron | 40.0% | |
| AAACATAAACAAACAGGGGC+AGG | + | chr4_1:84009158-84009177 | None:intergenic | 40.0% | |
| !!! | GTTGCACCGCTAATCTTTTT+TGG | - | chr4_1:84009613-84009632 | Msa0579360:intron | 40.0% |
| !!! | CACCGCTAATCTTTTTTGGA+TGG | - | chr4_1:84009617-84009636 | Msa0579360:intron | 40.0% |
| CGCCATCCAAAAAAGATTAG+CGG | + | chr4_1:84009622-84009641 | None:intergenic | 40.0% | |
| AATATATGGGGCACGCAAAT+TGG | - | chr4_1:84009771-84009790 | Msa0579360:intron | 40.0% | |
| AACAACTGATTGAGAGAGAG+GGG | + | chr4_1:84009799-84009818 | None:intergenic | 40.0% | |
| AACTTGCCGGAAATCTTTAG+AGG | - | chr4_1:84010047-84010066 | Msa0579360:CDS | 40.0% | |
| ACTTGCCGGAAATCTTTAGA+GGG | - | chr4_1:84010048-84010067 | Msa0579360:CDS | 40.0% | |
| TTAATGAGGCAGACTTTGAG+TGG | + | chr4_1:84010407-84010426 | None:intergenic | 40.0% | |
| ! | GTATTGTTGCTTGGCACATA+AGG | + | chr4_1:84010749-84010768 | None:intergenic | 40.0% |
| CCTTTCAAGATGAGCTCTAT+GGG | + | chr4_1:84010868-84010887 | None:intergenic | 40.0% | |
| TGGGTCAAGTGTCATATTGA+TGG | + | chr4_1:84010995-84011014 | None:intergenic | 40.0% | |
| CTTGACCCAATTAAAGATGG+AGG | - | chr4_1:84011006-84011025 | Msa0579360:intron | 40.0% | |
| ACCCAATTAAAGATGGAGGA+TGG | - | chr4_1:84011010-84011029 | Msa0579360:intron | 40.0% | |
| GCCATCCTCCATCTTTAATT+GGG | + | chr4_1:84011014-84011033 | None:intergenic | 40.0% | |
| TGCCATCCTCCATCTTTAAT+TGG | + | chr4_1:84011015-84011034 | None:intergenic | 40.0% | |
| TAATTCTCCTTGCATCAAGG+AGG | + | chr4_1:84011043-84011062 | None:intergenic | 40.0% | |
| TCCTTGATGCAAGGAGAATT+AGG | - | chr4_1:84011042-84011061 | Msa0579360:intron | 40.0% | |
| TCTTAGTATGTCTCCCATCT+AGG | - | chr4_1:84011134-84011153 | Msa0579360:intron | 40.0% | |
| TAAGCTTGCCTAAGACCTTT+AGG | - | chr4_1:84011354-84011373 | Msa0579360:intron | 40.0% | |
| AAGCTTGCCTAAGACCTTTA+GGG | - | chr4_1:84011355-84011374 | Msa0579360:intron | 40.0% | |
| TACGTATCCCTAAAGGTCTT+AGG | + | chr4_1:84011365-84011384 | None:intergenic | 40.0% | |
| ! | TAAGACCTTTAGGGATACGT+AGG | - | chr4_1:84011364-84011383 | Msa0579360:intron | 40.0% |
| TAAGACCTACGTATCCCTAA+AGG | + | chr4_1:84011372-84011391 | None:intergenic | 40.0% | |
| !!! | AGAGCTACGTAGTTTTGTAC+CGG | + | chr4_1:84011469-84011488 | None:intergenic | 40.0% |
| CTGATTCCCTAAGACCTTTA+AGG | - | chr4_1:84011487-84011506 | Msa0579360:intron | 40.0% | |
| ATTTAGATGTGAGCTCGACA+AGG | + | chr4_1:84011533-84011552 | None:intergenic | 40.0% | |
| !!! | TTGTTTTAAGACTCGTGCGT+GGG | - | chr4_1:84011625-84011644 | Msa0579360:intron | 40.0% |
| GGCCAATAAACCTTTCTAGA+GGG | + | chr4_1:84011690-84011709 | None:intergenic | 40.0% | |
| AAAGACAGTTTCGGAGCTAA+AGG | + | chr4_1:84011735-84011754 | None:intergenic | 40.0% | |
| ACTGTCTTTCTCGTATCTTG+GGG | - | chr4_1:84011746-84011765 | Msa0579360:intron | 40.0% | |
| ! | ACTGGGGGTTTAAGTTACTT+AGG | - | chr4_1:84011809-84011828 | Msa0579360:intron | 40.0% |
| ! | CTGGGGGTTTAAGTTACTTA+GGG | - | chr4_1:84011810-84011829 | Msa0579360:intron | 40.0% |
| AAGTTACTTAGGGCCTAAGT+CGG | - | chr4_1:84011820-84011839 | Msa0579360:intron | 40.0% | |
| AGCTTATGATTTCCCGACTT+AGG | + | chr4_1:84011836-84011855 | None:intergenic | 40.0% | |
| GGGAAATCATAAGCTCAAGA+GGG | - | chr4_1:84011841-84011860 | Msa0579360:intron | 40.0% | |
| ! | AACTAGGGTTTGGTCTGTTT+AGG | + | chr4_1:84011905-84011924 | None:intergenic | 40.0% |
| GTCATTGAATGAGATGCCTT+TGG | + | chr4_1:84012255-84012274 | None:intergenic | 40.0% | |
| GAGTGGTAGTTAAAGGAATC+GGG | - | chr4_1:84012337-84012356 | Msa0579360:CDS | 40.0% | |
| AGTGGTAGTTAAAGGAATCG+GGG | - | chr4_1:84012338-84012357 | Msa0579360:CDS | 40.0% | |
| GAATCAGCACAAACAACGGT+AGG | - | chr4_1:84005342-84005361 | Msa0579360:intron | 45.0% | |
| CAAACAACGGTAGGGAAACA+AGG | - | chr4_1:84005351-84005370 | Msa0579360:intron | 45.0% | |
| AAGGTTGCAACTTCTGCAGA+GGG | - | chr4_1:84005378-84005397 | Msa0579360:intron | 45.0% | |
| ATCAAGCACACCTGCTTCTT+CGG | + | chr4_1:84005481-84005500 | None:intergenic | 45.0% | |
| TGGATCCATCATCAGACATG+TGG | + | chr4_1:84005646-84005665 | None:intergenic | 45.0% | |
| !! | TCGCTTTTGAGGGGTTTTGA+GGG | + | chr4_1:84005978-84005997 | None:intergenic | 45.0% |
| !! | ATCGCTTTTGAGGGGTTTTG+AGG | + | chr4_1:84005979-84005998 | None:intergenic | 45.0% |
| CTCCACATGTACCTAAAGTC+TGG | - | chr4_1:84006351-84006370 | Msa0579360:intron | 45.0% | |
| ! | TCTACTTTCTAGCATGGGAC+AGG | - | chr4_1:84007072-84007091 | Msa0579360:intron | 45.0% |
| !!! | CGATTTTTTGGCAGGTGCAA+AGG | - | chr4_1:84007630-84007649 | Msa0579360:intron | 45.0% |
| GCTAATGTTCAGAAGACCGT+AGG | - | chr4_1:84007694-84007713 | Msa0579360:intron | 45.0% | |
| ! | CTTGGTAGCATACTCTCCTA+CGG | + | chr4_1:84007713-84007732 | None:intergenic | 45.0% |
| ! | GGTGGTGCTAAAAATGCTGT+TGG | - | chr4_1:84007790-84007809 | Msa0579360:intron | 45.0% |
| GGTGCTAAAAATGCTGTTGG+AGG | - | chr4_1:84007793-84007812 | Msa0579360:intron | 45.0% | |
| GACCCGAGCCAACAAATTAT+AGG | - | chr4_1:84008345-84008364 | Msa0579360:intron | 45.0% | |
| !! | GGCCTATAATTTGTTGGCTC+GGG | + | chr4_1:84008350-84008369 | None:intergenic | 45.0% |
| AATTATAGGCCTAGCACCCT+TGG | - | chr4_1:84008359-84008378 | Msa0579360:intron | 45.0% | |
| TTCAGAGAGGGGAAAACCAA+TGG | + | chr4_1:84010666-84010685 | None:intergenic | 45.0% | |
| CCCATAGAGCTCATCTTGAA+AGG | - | chr4_1:84010865-84010884 | Msa0579360:intron | 45.0% | |
| GCCTTTCAAGATGAGCTCTA+TGG | + | chr4_1:84010869-84010888 | None:intergenic | 45.0% | |
| GCCTAATTCTCCTTGCATCA+AGG | + | chr4_1:84011046-84011065 | None:intergenic | 45.0% | |
| ! | CCCAAGAAAGAGGCATGTAA+GGG | + | chr4_1:84011292-84011311 | None:intergenic | 45.0% |
| CCCTTACATGCCTCTTTCTT+GGG | - | chr4_1:84011289-84011308 | Msa0579360:intron | 45.0% | |
| ! | TCCCAAGAAAGAGGCATGTA+AGG | + | chr4_1:84011293-84011312 | None:intergenic | 45.0% |
| TTACATGCCTCTTTCTTGGG+AGG | - | chr4_1:84011292-84011311 | Msa0579360:intron | 45.0% | |
| ! | GCAAGCTTATCGCCCTTTTA+TGG | + | chr4_1:84011429-84011448 | None:intergenic | 45.0% |
| ! | GCAAGCTTATCGCCCTTTTA+TGG | - | chr4_1:84011429-84011448 | Msa0579360:intron | 45.0% |
| CACGCACGAGTCTTAAAACA+AGG | + | chr4_1:84011626-84011645 | None:intergenic | 45.0% | |
| !!! | CTTGTTTTAAGACTCGTGCG+TGG | - | chr4_1:84011624-84011643 | Msa0579360:intron | 45.0% |
| !!! | TGTTTTAAGACTCGTGCGTG+GGG | - | chr4_1:84011626-84011645 | Msa0579360:intron | 45.0% |
| ! | GGCCCTCTAGAAAGGTTTAT+TGG | - | chr4_1:84011685-84011704 | Msa0579360:intron | 45.0% |
| GGGCCAATAAACCTTTCTAG+AGG | + | chr4_1:84011691-84011710 | None:intergenic | 45.0% | |
| AGGTTTATTGGCCCTCTGTT+AGG | - | chr4_1:84011697-84011716 | Msa0579360:intron | 45.0% | |
| GGTTTATTGGCCCTCTGTTA+GGG | - | chr4_1:84011698-84011717 | Msa0579360:intron | 45.0% | |
| AGTTTCGGAGCTAAAGGCAA+GGG | + | chr4_1:84011729-84011748 | None:intergenic | 45.0% | |
| AGTAACTTAAACCCCCAGTC+AGG | + | chr4_1:84011808-84011827 | None:intergenic | 45.0% | |
| AGTTACTTAGGGCCTAAGTC+GGG | - | chr4_1:84011821-84011840 | Msa0579360:intron | 45.0% | |
| CGGGAAATCATAAGCTCAAG+AGG | - | chr4_1:84011840-84011859 | Msa0579360:intron | 45.0% | |
| ACCCCTACTTTACATTACGG+TGG | - | chr4_1:84012018-84012037 | Msa0579360:intron | 45.0% | |
| GCCACCGTAATGTAAAGTAG+GGG | + | chr4_1:84012022-84012041 | None:intergenic | 45.0% | |
| GGCCACCGTAATGTAAAGTA+GGG | + | chr4_1:84012023-84012042 | None:intergenic | 45.0% | |
| AGGCCACCGTAATGTAAAGT+AGG | + | chr4_1:84012024-84012043 | None:intergenic | 45.0% | |
| AAGGGTTCGAGGTTTCAACA+TGG | + | chr4_1:84012204-84012223 | None:intergenic | 45.0% | |
| !!! | TTAATTTTATTTTTTTTTGA+AGG | + | chr4_1:84006736-84006755 | None:intergenic | 5.0% |
| !! | TTAAAAAAGAAAAAAAAAAA+AGG | - | chr4_1:84006997-84007016 | Msa0579360:intron | 5.0% |
| !! | GATTAATTAATTAATTAATA+AGG | - | chr4_1:84007862-84007881 | Msa0579360:intron | 5.0% |
| !!! | TTTTAGTTAATATTTAAATT+TGG | - | chr4_1:84009485-84009504 | Msa0579360:intron | 5.0% |
| !! | TTTAGTTAATATTTAAATTT+GGG | - | chr4_1:84009486-84009505 | Msa0579360:intron | 5.0% |
| !!! | TTTTTTATTTCTATTTAATT+TGG | - | chr4_1:84009533-84009552 | Msa0579360:intron | 5.0% |
| !!! | TGAGGTTTTGGGGAGTGCAA+AGG | - | chr4_1:84005311-84005330 | Msa0579360:intron | 50.0% |
| GGTAGGGAAACAAGGTGAGA+AGG | - | chr4_1:84005359-84005378 | Msa0579360:intron | 50.0% | |
| GAAGGTTGCAACTTCTGCAG+AGG | - | chr4_1:84005377-84005396 | Msa0579360:intron | 50.0% | |
| ! | CACACCTGCTTCTTCGGTTT+TGG | + | chr4_1:84005475-84005494 | None:intergenic | 50.0% |
| GAAGAAGCAGGTGTGCTTGA+TGG | - | chr4_1:84005480-84005499 | Msa0579360:intron | 50.0% | |
| !!! | CGCTTTTGAGGGGTTTTGAG+GGG | + | chr4_1:84005977-84005996 | None:intergenic | 50.0% |
| TCTAGCATGGGACAGGAACA+AGG | - | chr4_1:84007079-84007098 | Msa0579360:intron | 50.0% | |
| CTAGCATGGGACAGGAACAA+GGG | - | chr4_1:84007080-84007099 | Msa0579360:intron | 50.0% | |
| ATTGGACGGAAGGAGAAGGA+GGG | + | chr4_1:84007255-84007274 | None:intergenic | 50.0% | |
| TATTGGACGGAAGGAGAAGG+AGG | + | chr4_1:84007256-84007275 | None:intergenic | 50.0% | |
| ! | CGTAGGAGAGTATGCTACCA+AGG | - | chr4_1:84007711-84007730 | Msa0579360:intron | 50.0% |
| CTGGACAAAATCAGCAGCCT+TGG | + | chr4_1:84007731-84007750 | None:intergenic | 50.0% | |
| ! | TTTGGCTGGCTCTTCTGGTT+TGG | + | chr4_1:84007755-84007774 | None:intergenic | 50.0% |
| ! | ACCAATCACACCTTCGGGTT+TGG | + | chr4_1:84007773-84007792 | None:intergenic | 50.0% |
| ! | AAACCCGAAGGTGTGATTGG+TGG | - | chr4_1:84007772-84007791 | Msa0579360:intron | 50.0% |
| AGCACCACCAATCACACCTT+CGG | + | chr4_1:84007779-84007798 | None:intergenic | 50.0% | |
| TGGACGAAAAAGAAGGCTCG+CGG | + | chr4_1:84008446-84008465 | None:intergenic | 50.0% | |
| !! | GGAGGATAAAGAGGTGCTAG+AGG | + | chr4_1:84009013-84009032 | None:intergenic | 50.0% |
| AGCACCTCTTTATCCTCCCT+CGG | - | chr4_1:84009015-84009034 | Msa0579360:intron | 50.0% | |
| CACAACACCTCCTTGATGCA+AGG | - | chr4_1:84011033-84011052 | Msa0579360:intron | 50.0% | |
| GAGAATTAGGCGCATGAACC+TGG | - | chr4_1:84011055-84011074 | Msa0579360:intron | 50.0% | |
| ! | TCTGACTTGATCGCCCCTTA+GGG | + | chr4_1:84011239-84011258 | None:intergenic | 50.0% |
| ! | ATCTGACTTGATCGCCCCTT+AGG | + | chr4_1:84011240-84011259 | None:intergenic | 50.0% |
| ! | AGAGGCATGTAAGGGCAAAG+TGG | + | chr4_1:84011284-84011303 | None:intergenic | 50.0% |
| GCCCTTACATGCCTCTTTCT+TGG | - | chr4_1:84011288-84011307 | Msa0579360:intron | 50.0% | |
| TCCACAACCTCCCAAGAAAG+AGG | + | chr4_1:84011302-84011321 | None:intergenic | 50.0% | |
| !!! | GTTTTAAGACTCGTGCGTGG+GGG | - | chr4_1:84011627-84011646 | Msa0579360:intron | 50.0% |
| GTTTCGGAGCTAAAGGCAAG+GGG | + | chr4_1:84011728-84011747 | None:intergenic | 50.0% | |
| CAGTTTCGGAGCTAAAGGCA+AGG | + | chr4_1:84011730-84011749 | None:intergenic | 50.0% | |
| GCACTCCCCAAAACCTCACT+TGG | + | chr4_1:84005309-84005328 | None:intergenic | 55.0% | |
| !!! | GGTTTTGGGGAGTGCAAAGG+TGG | - | chr4_1:84005314-84005333 | Msa0579360:intron | 55.0% |
| TTTGGCAGGCTCCACAGGTT+TGG | + | chr4_1:84005457-84005476 | None:intergenic | 55.0% | |
| !! | CCTGCTTCTTCGGTTTTGGC+AGG | + | chr4_1:84005471-84005490 | None:intergenic | 55.0% |
| CCTGCCAAAACCGAAGAAGC+AGG | - | chr4_1:84005468-84005487 | Msa0579360:intron | 55.0% | |
| CAGGGACGGATCCAGACTTT+AGG | + | chr4_1:84006365-84006384 | None:intergenic | 55.0% | |
| TTGGACGGAAGGAGAAGGAG+GGG | + | chr4_1:84007254-84007273 | None:intergenic | 55.0% | |
| !! | CTGGCTCTTCTGGTTTGGAC+TGG | + | chr4_1:84007750-84007769 | None:intergenic | 55.0% |
| ! | ATCACACCTTCGGGTTTGGC+TGG | + | chr4_1:84007769-84007788 | None:intergenic | 55.0% |
| ! | GCCAAACCCGAAGGTGTGAT+TGG | - | chr4_1:84007769-84007788 | Msa0579360:intron | 55.0% |
| GCACCACCAATCACACCTTC+GGG | + | chr4_1:84007778-84007797 | None:intergenic | 55.0% | |
| ! | TGGCTCGGGTCACTCACTTA+TGG | + | chr4_1:84008336-84008355 | None:intergenic | 55.0% |
| ATAGGCCTAGCACCCTTGGA+TGG | - | chr4_1:84008363-84008382 | Msa0579360:intron | 55.0% | |
| !! | TCTAGCCATCCAAGGGTGCT+AGG | + | chr4_1:84008371-84008390 | None:intergenic | 55.0% |
| ! | GTCGAGCTCTAGCCATCCAA+GGG | + | chr4_1:84008378-84008397 | None:intergenic | 55.0% |
| GGACGAAAAAGAAGGCTCGC+GGG | + | chr4_1:84008445-84008464 | None:intergenic | 55.0% | |
| GGAACCGAGGGAGGATAAAG+AGG | + | chr4_1:84009022-84009041 | None:intergenic | 55.0% | |
| TGCATTGCAGAGGCTCAGTG+AGG | + | chr4_1:84009043-84009062 | None:intergenic | 55.0% | |
| CAGGGGCAGGATCACTAAAG+TGG | + | chr4_1:84009145-84009164 | None:intergenic | 55.0% | |
| GTTGGGGGACCAAAACTTGC+CGG | - | chr4_1:84010034-84010053 | Msa0579360:CDS | 55.0% | |
| GCCTCTTTCTTGGGAGGTTG+TGG | - | chr4_1:84011298-84011317 | Msa0579360:intron | 55.0% | |
| ! | GGCTTACTGGCCCTCTAGAA+AGG | - | chr4_1:84011677-84011696 | Msa0579360:intron | 55.0% |
| TAGCACGCGCATTTCCTGAC+TGG | - | chr4_1:84011791-84011810 | Msa0579360:intron | 55.0% | |
| AGCACGCGCATTTCCTGACT+GGG | - | chr4_1:84011792-84011811 | Msa0579360:intron | 55.0% | |
| !! | TCGGTTTTGGCAGGCTCCAC+AGG | + | chr4_1:84005462-84005481 | None:intergenic | 60.0% |
| ACGGAAGGAGAAGGAGGGGA+GGG | + | chr4_1:84007250-84007269 | None:intergenic | 60.0% | |
| ! | TCGGGTTTGGCTGGCTCTTC+TGG | + | chr4_1:84007760-84007779 | None:intergenic | 60.0% |
| GAAGAGCCAGCCAAACCCGA+AGG | - | chr4_1:84007760-84007779 | Msa0579360:intron | 60.0% | |
| ! | CGTCGAGCTCTAGCCATCCA+AGG | + | chr4_1:84008379-84008398 | None:intergenic | 60.0% |
| TCGCGGGACGCTTCAAAGGT+GGG | + | chr4_1:84008429-84008448 | None:intergenic | 60.0% | |
| GAGGCTCAGTGAGGAACCGA+GGG | + | chr4_1:84009034-84009053 | None:intergenic | 60.0% | |
| AGAGGCTCAGTGAGGAACCG+AGG | + | chr4_1:84009035-84009054 | None:intergenic | 60.0% | |
| GCACGCGCATTTCCTGACTG+GGG | - | chr4_1:84011793-84011812 | Msa0579360:intron | 60.0% | |
| CACGCGCATTTCCTGACTGG+GGG | - | chr4_1:84011794-84011813 | Msa0579360:intron | 60.0% | |
| GACGGAAGGAGAAGGAGGGG+AGG | + | chr4_1:84007251-84007270 | None:intergenic | 65.0% | |
| CTCGCGGGACGCTTCAAAGG+TGG | + | chr4_1:84008430-84008449 | None:intergenic | 65.0% | |
| AGGCTCGCGGGACGCTTCAA+AGG | + | chr4_1:84008433-84008452 | None:intergenic | 65.0% | |
| GCTCAGTGAGGAACCGAGGG+AGG | + | chr4_1:84009031-84009050 | None:intergenic | 65.0% | |
| ! | AAGGGGCGCGCCCTAACAGA+GGG | + | chr4_1:84011711-84011730 | None:intergenic | 65.0% |
| GACTCGTGCGTGGGGGACTG+TGG | - | chr4_1:84011634-84011653 | Msa0579360:intron | 70.0% | |
| ! | CAAGGGGCGCGCCCTAACAG+AGG | + | chr4_1:84011712-84011731 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 84005273 | 84012527 | 84005273 | ID=Msa0579360;Name=Msa0579360 |
| chr4_1 | mRNA | 84005273 | 84012527 | 84005273 | ID=Msa0579360-mRNA-1;Parent=Msa0579360;Name=Msa0579360-mRNA-1;_AED=0.38;_eAED=0.47;_QI=0|0|0|1|0|0|3|0|156 |
| chr4_1 | exon | 84012299 | 84012527 | 84012299 | ID=Msa0579360-mRNA-1:exon:30790;Parent=Msa0579360-mRNA-1 |
| chr4_1 | exon | 84009993 | 84010198 | 84009993 | ID=Msa0579360-mRNA-1:exon:30789;Parent=Msa0579360-mRNA-1 |
| chr4_1 | exon | 84005273 | 84005308 | 84005273 | ID=Msa0579360-mRNA-1:exon:30788;Parent=Msa0579360-mRNA-1 |
| chr4_1 | CDS | 84012299 | 84012527 | 84012299 | ID=Msa0579360-mRNA-1:cds;Parent=Msa0579360-mRNA-1 |
| chr4_1 | CDS | 84009993 | 84010198 | 84009993 | ID=Msa0579360-mRNA-1:cds;Parent=Msa0579360-mRNA-1 |
| chr4_1 | CDS | 84005273 | 84005308 | 84005273 | ID=Msa0579360-mRNA-1:cds;Parent=Msa0579360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
