Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790640 | XP_013446398.1 | 98.246 | 228 | 2 | 1 | 1 | 228 | 1 | 226 | 1.07e-162 | 458 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790640 | sp|Q9LFF9|IPYR4_ARATH | 80.189 | 212 | 38 | 2 | 17 | 228 | 9 | 216 | 7.92e-124 | 352 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790640 | I3SMR6 | 98.246 | 228 | 2 | 1 | 1 | 228 | 1 | 226 | 5.12e-163 | 458 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004340 | Msa0790640 | 0.811667 | 6.243148e-51 | -8.615850e-47 |
| Msa0012380 | Msa0790640 | 0.840666 | 7.579332e-58 | -8.615850e-47 |
| Msa0014410 | Msa0790640 | 0.855521 | 5.966009e-62 | -8.615850e-47 |
| Msa0035290 | Msa0790640 | 0.805373 | 1.377292e-49 | -8.615850e-47 |
| Msa0044180 | Msa0790640 | 0.869342 | 3.326586e-66 | -8.615850e-47 |
| Msa0046050 | Msa0790640 | 0.810711 | 1.006055e-50 | -8.615850e-47 |
| Msa0064550 | Msa0790640 | 0.881196 | 2.935401e-70 | -8.615850e-47 |
| Msa0068410 | Msa0790640 | 0.803230 | 3.849471e-49 | -8.615850e-47 |
| Msa0072830 | Msa0790640 | 0.816722 | 4.776279e-52 | -8.615850e-47 |
| Msa0072860 | Msa0790640 | 0.818671 | 1.735901e-52 | -8.615850e-47 |
| Msa0090860 | Msa0790640 | 0.862924 | 3.590630e-64 | -8.615850e-47 |
| Msa0096020 | Msa0790640 | 0.814069 | 1.858568e-51 | -8.615850e-47 |
| Msa0096510 | Msa0790640 | 0.800383 | 1.478825e-48 | -8.615850e-47 |
| Msa0108070 | Msa0790640 | 0.834674 | 2.614677e-56 | -8.615850e-47 |
| Msa0109490 | Msa0790640 | 0.848194 | 7.158946e-60 | -8.615850e-47 |
| Msa0604880 | Msa0790640 | 0.858995 | 5.615547e-63 | -8.615850e-47 |
| Msa0605250 | Msa0790640 | 0.868999 | 4.300114e-66 | -8.615850e-47 |
| Msa0609790 | Msa0790640 | 0.875203 | 3.706969e-68 | -8.615850e-47 |
| Msa0610780 | Msa0790640 | 0.835006 | 2.156893e-56 | -8.615850e-47 |
| Msa0610810 | Msa0790640 | 0.830805 | 2.387397e-55 | -8.615850e-47 |
| Msa0614980 | Msa0790640 | 0.815331 | 9.763549e-52 | -8.615850e-47 |
| Msa0617120 | Msa0790640 | 0.816230 | 6.155508e-52 | -8.615850e-47 |
| Msa0621780 | Msa0790640 | 0.802422 | 5.652501e-49 | -8.615850e-47 |
| Msa0622250 | Msa0790640 | 0.858771 | 6.552565e-63 | -8.615850e-47 |
| Msa0624040 | Msa0790640 | 0.836205 | 1.072539e-56 | -8.615850e-47 |
| Msa0627050 | Msa0790640 | 0.848347 | 6.493716e-60 | -8.615850e-47 |
| Msa0628100 | Msa0790640 | 0.806857 | 6.711003e-50 | -8.615850e-47 |
| Msa0636720 | Msa0790640 | 0.862592 | 4.544442e-64 | -8.615850e-47 |
| Msa0644630 | Msa0790640 | 0.805457 | 1.322403e-49 | -8.615850e-47 |
| Msa0645410 | Msa0790640 | 0.824831 | 6.523052e-54 | -8.615850e-47 |
| Msa0646190 | Msa0790640 | 0.870063 | 1.936196e-66 | -8.615850e-47 |
| Msa0646340 | Msa0790640 | 0.816501 | 5.352207e-52 | -8.615850e-47 |
| Msa0649310 | Msa0790640 | 0.838455 | 2.846447e-57 | -8.615850e-47 |
| Msa0650890 | Msa0790640 | 0.802219 | 6.222812e-49 | -8.615850e-47 |
| Msa0651310 | Msa0790640 | 0.847076 | 1.453708e-59 | -8.615850e-47 |
| Msa0659520 | Msa0790640 | 0.813939 | 1.985422e-51 | -8.615850e-47 |
| Msa0662120 | Msa0790640 | 0.805201 | 1.496216e-49 | -8.615850e-47 |
| Msa0665790 | Msa0790640 | 0.800295 | 1.541110e-48 | -8.615850e-47 |
| Msa0675010 | Msa0790640 | 0.818887 | 1.550438e-52 | -8.615850e-47 |
| Msa0676100 | Msa0790640 | 0.846511 | 2.075134e-59 | -8.615850e-47 |
| Msa0679780 | Msa0790640 | 0.838644 | 2.544354e-57 | -8.615850e-47 |
| Msa0681210 | Msa0790640 | 0.860557 | 1.901514e-63 | -8.615850e-47 |
| Msa0685890 | Msa0790640 | 0.849806 | 2.552503e-60 | -8.615850e-47 |
| Msa0693400 | Msa0790640 | 0.861918 | 7.319859e-64 | -8.615850e-47 |
| Msa0693500 | Msa0790640 | 0.842047 | 3.281766e-58 | -8.615850e-47 |
| Msa0705810 | Msa0790640 | 0.844048 | 9.622307e-59 | -8.615850e-47 |
| Msa0713210 | Msa0790640 | 0.830296 | 3.180579e-55 | -8.615850e-47 |
| Msa0713220 | Msa0790640 | 0.840201 | 1.002601e-57 | -8.615850e-47 |
| Msa0715510 | Msa0790640 | -0.811367 | 7.252988e-51 | -8.615850e-47 |
| Msa0742090 | Msa0790640 | 0.808714 | 2.703466e-50 | -8.615850e-47 |
| Msa0746980 | Msa0790640 | 0.819022 | 1.444674e-52 | -8.615850e-47 |
| Msa0748330 | Msa0790640 | 0.853061 | 3.063793e-61 | -8.615850e-47 |
| Msa0748980 | Msa0790640 | 0.824709 | 6.967380e-54 | -8.615850e-47 |
| Msa0754350 | Msa0790640 | 0.817487 | 3.215609e-52 | -8.615850e-47 |
| Msa0755090 | Msa0790640 | 0.803802 | 2.929314e-49 | -8.615850e-47 |
| Msa0772500 | Msa0790640 | 0.810663 | 1.030673e-50 | -8.615850e-47 |
| Msa0786100 | Msa0790640 | 0.801363 | 9.329357e-49 | -8.615850e-47 |
| Msa0790640 | Msa0793100 | 0.840724 | 7.318272e-58 | -8.615850e-47 |
| Msa0790640 | Msa0795710 | 0.803040 | 4.213680e-49 | -8.615850e-47 |
| Msa0790640 | Msa0797000 | 0.808362 | 3.214816e-50 | -8.615850e-47 |
| Msa0790640 | Msa0806720 | 0.831061 | 2.065804e-55 | -8.615850e-47 |
| Msa0790640 | Msa0806760 | 0.824701 | 6.999919e-54 | -8.615850e-47 |
| Msa0790640 | Msa0812970 | 0.804304 | 2.304021e-49 | -8.615850e-47 |
| Msa0790640 | Msa0818550 | 0.811477 | 6.867030e-51 | -8.615850e-47 |
| Msa0790640 | Msa0825520 | 0.828236 | 1.005533e-54 | -8.615850e-47 |
| Msa0790640 | Msa0828570 | 0.800846 | 1.189934e-48 | -8.615850e-47 |
| Msa0790640 | Msa0853480 | 0.808339 | 3.251656e-50 | -8.615850e-47 |
| Msa0790640 | Msa0864730 | 0.828832 | 7.218744e-55 | -8.615850e-47 |
| Msa0790640 | Msa0864750 | 0.830117 | 3.518046e-55 | -8.615850e-47 |
| Msa0790640 | Msa0879650 | 0.842900 | 1.949030e-58 | -8.615850e-47 |
| Msa0790640 | Msa0882700 | 0.805339 | 1.400109e-49 | -8.615850e-47 |
| Msa0790640 | Msa0892020 | 0.836643 | 8.299058e-57 | -8.615850e-47 |
| Msa0790640 | Msa0899700 | 0.801035 | 1.088806e-48 | -8.615850e-47 |
| Msa0790640 | Msa0899730 | 0.827643 | 1.396921e-54 | -8.615850e-47 |
| Msa0790640 | Msa0904630 | 0.800746 | 1.247469e-48 | -8.615850e-47 |
| Msa0790640 | Msa0909720 | 0.804952 | 1.687130e-49 | -8.615850e-47 |
| Msa0790640 | Msa0928940 | 0.823825 | 1.124631e-53 | -8.615850e-47 |
| Msa0790640 | Msa0928970 | 0.838333 | 3.061415e-57 | -8.615850e-47 |
| Msa0790640 | Msa0944690 | 0.830430 | 2.949549e-55 | -8.615850e-47 |
| Msa0790640 | Msa0945960 | 0.820594 | 6.316139e-53 | -8.615850e-47 |
| Msa0790640 | Msa0956910 | 0.812049 | 5.155443e-51 | -8.615850e-47 |
| Msa0790640 | Msa0964650 | 0.838484 | 2.797812e-57 | -8.615850e-47 |
| Msa0790640 | Msa0968780 | 0.833540 | 5.029713e-56 | -8.615850e-47 |
| Msa0790640 | Msa0973890 | 0.810160 | 1.323134e-50 | -8.615850e-47 |
| Msa0790640 | Msa0984000 | 0.869576 | 2.792303e-66 | -8.615850e-47 |
| Msa0790640 | Msa1004210 | 0.805353 | 1.390727e-49 | -8.615850e-47 |
| Msa0790640 | Msa1031150 | 0.833523 | 5.077405e-56 | -8.615850e-47 |
| Msa0790640 | Msa1036250 | 0.807821 | 4.190850e-50 | -8.615850e-47 |
| Msa0790640 | Msa1053690 | 0.805904 | 1.065877e-49 | -8.615850e-47 |
| Msa0790640 | Msa1070250 | 0.824340 | 8.511360e-54 | -8.615850e-47 |
| Msa0790640 | Msa1076520 | 0.812759 | 3.607287e-51 | -8.615850e-47 |
| Msa0790640 | Msa1082150 | 0.841503 | 4.566957e-58 | -8.615850e-47 |
| Msa0790640 | Msa1119570 | 0.842331 | 2.759970e-58 | -8.615850e-47 |
| Msa0790640 | Msa1122720 | 0.809368 | 1.959009e-50 | -8.615850e-47 |
| Msa0790640 | Msa1134560 | 0.803140 | 4.017986e-49 | -8.615850e-47 |
| Msa0790640 | Msa1137940 | 0.800322 | 1.522001e-48 | -8.615850e-47 |
| Msa0790640 | Msa1144730 | 0.893067 | 8.875625e-75 | -8.615850e-47 |
| Msa0790640 | Msa1158090 | 0.860777 | 1.630168e-63 | -8.615850e-47 |
| Msa0790640 | Msa1165810 | 0.805391 | 1.365605e-49 | -8.615850e-47 |
| Msa0790640 | Msa1173380 | 0.847125 | 1.409559e-59 | -8.615850e-47 |
| Msa0790640 | Msa1177240 | 0.826034 | 3.384519e-54 | -8.615850e-47 |
| Msa0790640 | Msa1180050 | 0.830654 | 2.600457e-55 | -8.615850e-47 |
| Msa0790640 | Msa1181510 | 0.810666 | 1.029298e-50 | -8.615850e-47 |
| Msa0790640 | Msa1182800 | 0.819168 | 1.337805e-52 | -8.615850e-47 |
| Msa0790640 | Msa1182830 | 0.813274 | 2.780817e-51 | -8.615850e-47 |
| Msa0790640 | Msa1184010 | 0.818851 | 1.580039e-52 | -8.615850e-47 |
| Msa0790640 | Msa1198720 | 0.807592 | 4.688845e-50 | -8.615850e-47 |
| Msa0790640 | Msa1219060 | 0.834183 | 3.472604e-56 | -8.615850e-47 |
| Msa0790640 | Msa1219780 | -0.802692 | 4.973217e-49 | -8.615850e-47 |
| Msa0790640 | Msa1226880 | 0.802430 | 5.630556e-49 | -8.615850e-47 |
| Msa0790640 | Msa1228350 | 0.825702 | 4.059316e-54 | -8.615850e-47 |
| Msa0790640 | Msa1232270 | 0.850071 | 2.152132e-60 | -8.615850e-47 |
| Msa0790640 | Msa1236860 | 0.804694 | 1.909979e-49 | -8.615850e-47 |
| Msa0790640 | Msa1239900 | 0.840844 | 6.806921e-58 | -8.615850e-47 |
| Msa0790640 | Msa1241820 | 0.804463 | 2.134183e-49 | -8.615850e-47 |
| Msa0790640 | Msa1248220 | 0.801548 | 8.546830e-49 | -8.615850e-47 |
| Msa0790640 | Msa1255020 | 0.896803 | 2.596606e-76 | -8.615850e-47 |
| Msa0790640 | Msa1270770 | 0.832495 | 9.152462e-56 | -8.615850e-47 |
| Msa0790640 | Msa1272340 | 0.808061 | 3.726454e-50 | -8.615850e-47 |
| Msa0790640 | Msa1272950 | 0.839155 | 1.876205e-57 | -8.615850e-47 |
| Msa0790640 | Msa1281270 | 0.835438 | 1.678274e-56 | -8.615850e-47 |
| Msa0790640 | Msa1295470 | 0.891695 | 3.140312e-74 | -8.615850e-47 |
| Msa0790640 | Msa1306190 | 0.814133 | 1.799442e-51 | -8.615850e-47 |
| Msa0790640 | Msa1306200 | 0.822643 | 2.122840e-53 | -8.615850e-47 |
| Msa0790640 | Msa1317030 | 0.805202 | 1.495628e-49 | -8.615850e-47 |
| Msa0790640 | Msa1317240 | 0.804508 | 2.088561e-49 | -8.615850e-47 |
| Msa0790640 | Msa1320380 | 0.847555 | 1.073982e-59 | -8.615850e-47 |
| Msa0790640 | Msa1326400 | 0.822271 | 2.590160e-53 | -8.615850e-47 |
| Msa0790640 | Msa1338590 | 0.807032 | 6.160756e-50 | -8.615850e-47 |
| Msa0790640 | Msa1349810 | 0.888377 | 6.233413e-73 | -8.615850e-47 |
| Msa0790640 | Msa1354090 | 0.858288 | 9.130752e-63 | -8.615850e-47 |
| Msa0790640 | Msa1358340 | 0.862900 | 3.652256e-64 | -8.615850e-47 |
| Msa0790640 | Msa1359890 | 0.868743 | 5.203472e-66 | -8.615850e-47 |
| Msa0790640 | Msa1369180 | 0.841555 | 4.427187e-58 | -8.615850e-47 |
| Msa0790640 | Msa1373390 | 0.829936 | 3.893979e-55 | -8.615850e-47 |
| Msa0790640 | Msa1375780 | 0.855458 | 6.225457e-62 | -8.615850e-47 |
| Msa0790640 | Msa1378470 | 0.844369 | 7.892315e-59 | -8.615850e-47 |
| Msa0790640 | Msa1381210 | -0.809397 | 1.931309e-50 | -8.615850e-47 |
| Msa0790640 | Msa1384620 | 0.828950 | 6.759481e-55 | -8.615850e-47 |
| Msa0790640 | Msa1387520 | 0.832565 | 8.792092e-56 | -8.615850e-47 |
| Msa0790640 | Msa1388520 | 0.814467 | 1.518351e-51 | -8.615850e-47 |
| Msa0790640 | Msa1394900 | 0.858055 | 1.071316e-62 | -8.615850e-47 |
| Msa0790640 | Msa1403950 | 0.801471 | 8.862872e-49 | -8.615850e-47 |
| Msa0790640 | Msa1405380 | 0.815694 | 8.107497e-52 | -8.615850e-47 |
| Msa0790640 | Msa1407210 | -0.802307 | 5.969381e-49 | -8.615850e-47 |
| Msa0790640 | Msa1421870 | 0.813583 | 2.378021e-51 | -8.615850e-47 |
| Msa0790640 | Msa1434660 | 0.856394 | 3.313654e-62 | -8.615850e-47 |
| Msa0790640 | Msa1439070 | 0.804227 | 2.389736e-49 | -8.615850e-47 |
| Msa0790640 | Msa1459540 | 0.846571 | 1.998249e-59 | -8.615850e-47 |
| Msa0790640 | Msa1462600 | 0.809450 | 1.881441e-50 | -8.615850e-47 |
| Msa0790640 | Msa1466350 | 0.849516 | 3.075819e-60 | -8.615850e-47 |
| Msa0129360 | Msa0790640 | 0.808500 | 3.004410e-50 | -8.615850e-47 |
| Msa0140290 | Msa0790640 | 0.858892 | 6.031123e-63 | -8.615850e-47 |
| Msa0154200 | Msa0790640 | 0.805697 | 1.177950e-49 | -8.615850e-47 |
| Msa0154220 | Msa0790640 | 0.869343 | 3.324772e-66 | -8.615850e-47 |
| Msa0154240 | Msa0790640 | 0.850568 | 1.561039e-60 | -8.615850e-47 |
| Msa0154270 | Msa0790640 | 0.889710 | 1.897227e-73 | -8.615850e-47 |
| Msa0155610 | Msa0790640 | 0.853843 | 1.827828e-61 | -8.615850e-47 |
| Msa0166570 | Msa0790640 | 0.808842 | 2.539410e-50 | -8.615850e-47 |
| Msa0171920 | Msa0790640 | 0.824055 | 9.929380e-54 | -8.615850e-47 |
| Msa0176040 | Msa0790640 | 0.806417 | 8.310639e-50 | -8.615850e-47 |
| Msa0183560 | Msa0790640 | 0.860535 | 1.930207e-63 | -8.615850e-47 |
| Msa0187980 | Msa0790640 | 0.847424 | 1.167012e-59 | -8.615850e-47 |
| Msa0197030 | Msa0790640 | 0.831580 | 1.539811e-55 | -8.615850e-47 |
| Msa0199740 | Msa0790640 | 0.805574 | 1.250269e-49 | -8.615850e-47 |
| Msa0202740 | Msa0790640 | 0.812358 | 4.414350e-51 | -8.615850e-47 |
| Msa0212730 | Msa0790640 | 0.841848 | 3.705148e-58 | -8.615850e-47 |
| Msa0216210 | Msa0790640 | 0.809958 | 1.462559e-50 | -8.615850e-47 |
| Msa0224370 | Msa0790640 | 0.830893 | 2.271878e-55 | -8.615850e-47 |
| Msa0224400 | Msa0790640 | 0.839026 | 2.026936e-57 | -8.615850e-47 |
| Msa0225880 | Msa0790640 | 0.829210 | 5.847071e-55 | -8.615850e-47 |
| Msa0373220 | Msa0790640 | 0.812316 | 4.508904e-51 | -8.615850e-47 |
| Msa0377280 | Msa0790640 | 0.814664 | 1.372941e-51 | -8.615850e-47 |
| Msa0380650 | Msa0790640 | 0.818979 | 1.477477e-52 | -8.615850e-47 |
| Msa0382590 | Msa0790640 | 0.838762 | 2.372115e-57 | -8.615850e-47 |
| Msa0387970 | Msa0790640 | 0.801992 | 6.931150e-49 | -8.615850e-47 |
| Msa0388200 | Msa0790640 | 0.834054 | 3.740141e-56 | -8.615850e-47 |
| Msa0392050 | Msa0790640 | 0.893528 | 5.779042e-75 | -8.615850e-47 |
| Msa0392540 | Msa0790640 | 0.817001 | 4.134031e-52 | -8.615850e-47 |
| Msa0401340 | Msa0790640 | 0.864387 | 1.261200e-64 | -8.615850e-47 |
| Msa0404060 | Msa0790640 | 0.809884 | 1.517412e-50 | -8.615850e-47 |
| Msa0404070 | Msa0790640 | 0.850993 | 1.185261e-60 | -8.615850e-47 |
| Msa0404690 | Msa0790640 | 0.817809 | 2.719778e-52 | -8.615850e-47 |
| Msa0412190 | Msa0790640 | 0.824907 | 6.259247e-54 | -8.615850e-47 |
| Msa0416540 | Msa0790640 | 0.828229 | 1.009577e-54 | -8.615850e-47 |
| Msa0418430 | Msa0790640 | 0.807704 | 4.438359e-50 | -8.615850e-47 |
| Msa0421720 | Msa0790640 | 0.815661 | 8.244855e-52 | -8.615850e-47 |
| Msa0430290 | Msa0790640 | 0.821123 | 4.772817e-53 | -8.615850e-47 |
| Msa0432720 | Msa0790640 | 0.833579 | 4.919127e-56 | -8.615850e-47 |
| Msa0433670 | Msa0790640 | 0.845019 | 5.271396e-59 | -8.615850e-47 |
| Msa0437550 | Msa0790640 | 0.855633 | 5.533255e-62 | -8.615850e-47 |
| Msa0437790 | Msa0790640 | 0.824718 | 6.936239e-54 | -8.615850e-47 |
| Msa0440310 | Msa0790640 | 0.802054 | 6.729921e-49 | -8.615850e-47 |
| Msa0448120 | Msa0790640 | 0.855577 | 5.748295e-62 | -8.615850e-47 |
| Msa0456760 | Msa0790640 | 0.817108 | 3.911514e-52 | -8.615850e-47 |
| Msa0463150 | Msa0790640 | 0.803210 | 3.885736e-49 | -8.615850e-47 |
| Msa0465800 | Msa0790640 | 0.831833 | 1.334178e-55 | -8.615850e-47 |
| Msa0468020 | Msa0790640 | 0.807932 | 3.969869e-50 | -8.615850e-47 |
| Msa0469950 | Msa0790640 | 0.895487 | 9.144811e-76 | -8.615850e-47 |
| Msa0472740 | Msa0790640 | 0.818599 | 1.802509e-52 | -8.615850e-47 |
| Msa0477550 | Msa0790640 | 0.831087 | 2.035711e-55 | -8.615850e-47 |
| Msa0481490 | Msa0790640 | 0.840763 | 7.148321e-58 | -8.615850e-47 |
| Msa0238860 | Msa0790640 | 0.823399 | 1.414356e-53 | -8.615850e-47 |
| Msa0242290 | Msa0790640 | 0.804860 | 1.763322e-49 | -8.615850e-47 |
| Msa0253160 | Msa0790640 | 0.873938 | 9.972050e-68 | -8.615850e-47 |
| Msa0260190 | Msa0790640 | 0.845672 | 3.509990e-59 | -8.615850e-47 |
| Msa0260470 | Msa0790640 | 0.828510 | 8.636981e-55 | -8.615850e-47 |
| Msa0265580 | Msa0790640 | 0.840933 | 6.449437e-58 | -8.615850e-47 |
| Msa0276590 | Msa0790640 | 0.818998 | 1.463090e-52 | -8.615850e-47 |
| Msa0291940 | Msa0790640 | 0.869101 | 3.985165e-66 | -8.615850e-47 |
| Msa0295570 | Msa0790640 | 0.810547 | 1.091906e-50 | -8.615850e-47 |
| Msa0303440 | Msa0790640 | 0.853471 | 2.338477e-61 | -8.615850e-47 |
| Msa0303500 | Msa0790640 | 0.853861 | 1.805913e-61 | -8.615850e-47 |
| Msa0304110 | Msa0790640 | 0.841824 | 3.759529e-58 | -8.615850e-47 |
| Msa0316610 | Msa0790640 | 0.814419 | 1.555261e-51 | -8.615850e-47 |
| Msa0341190 | Msa0790640 | 0.839304 | 1.716248e-57 | -8.615850e-47 |
| Msa0344680 | Msa0790640 | 0.894088 | 3.426562e-75 | -8.615850e-47 |
| Msa0354390 | Msa0790640 | 0.825956 | 3.533415e-54 | -8.615850e-47 |
| Msa0358290 | Msa0790640 | 0.848623 | 5.445842e-60 | -8.615850e-47 |
| Msa0487490 | Msa0790640 | 0.810612 | 1.057171e-50 | -8.615850e-47 |
| Msa0501510 | Msa0790640 | 0.808791 | 2.603641e-50 | -8.615850e-47 |
| Msa0521570 | Msa0790640 | 0.833030 | 6.737586e-56 | -8.615850e-47 |
| Msa0525270 | Msa0790640 | 0.859623 | 3.639837e-63 | -8.615850e-47 |
| Msa0525280 | Msa0790640 | 0.866062 | 3.752705e-65 | -8.615850e-47 |
| Msa0530340 | Msa0790640 | 0.841821 | 3.765826e-58 | -8.615850e-47 |
| Msa0530950 | Msa0790640 | 0.808237 | 3.418856e-50 | -8.615850e-47 |
| Msa0545230 | Msa0790640 | 0.834553 | 2.804518e-56 | -8.615850e-47 |
| Msa0546080 | Msa0790640 | 0.850053 | 2.177237e-60 | -8.615850e-47 |
| Msa0548210 | Msa0790640 | 0.817125 | 3.877945e-52 | -8.615850e-47 |
| Msa0549110 | Msa0790640 | 0.810523 | 1.105088e-50 | -8.615850e-47 |
| Msa0549540 | Msa0790640 | 0.875850 | 2.226234e-68 | -8.615850e-47 |
| Msa0549760 | Msa0790640 | 0.881422 | 2.431945e-70 | -8.615850e-47 |
| Msa0556070 | Msa0790640 | 0.834666 | 2.626818e-56 | -8.615850e-47 |
| Msa0557490 | Msa0790640 | 0.819249 | 1.282303e-52 | -8.615850e-47 |
| Msa0570680 | Msa0790640 | 0.856429 | 3.237125e-62 | -8.615850e-47 |
| Msa0577050 | Msa0790640 | 0.817828 | 2.693789e-52 | -8.615850e-47 |
| Msa0580540 | Msa0790640 | 0.809891 | 1.512174e-50 | -8.615850e-47 |
| Msa0583740 | Msa0790640 | 0.823800 | 1.139663e-53 | -8.615850e-47 |
| Msa0584280 | Msa0790640 | 0.850088 | 2.128105e-60 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790640 | MtrunA17_Chr8g0372981 | 98.246 | 228 | 2 | 1 | 1 | 228 | 1 | 226 | 9.86e-167 | 458 |
| Msa0790640 | MtrunA17_Chr5g0404551 | 85.714 | 196 | 27 | 1 | 33 | 228 | 19 | 213 | 5.03e-127 | 357 |
| Msa0790640 | MtrunA17_Chr1g0182331 | 78.505 | 214 | 42 | 2 | 15 | 228 | 7 | 216 | 3.48e-123 | 348 |
| Msa0790640 | MtrunA17_Chr8g0345781 | 80.296 | 203 | 39 | 1 | 26 | 228 | 16 | 217 | 5.46e-123 | 347 |
| Msa0790640 | MtrunA17_Chr1g0200691 | 64.777 | 247 | 37 | 4 | 8 | 215 | 50 | 285 | 2.83e-107 | 310 |
| Msa0790640 | MtrunA17_Chr7g0276441 | 81.818 | 165 | 30 | 0 | 64 | 228 | 29 | 193 | 1.99e-99 | 287 |
| Msa0790640 | MtrunA17_Chr1g0210921 | 48.276 | 87 | 40 | 3 | 147 | 228 | 12 | 98 | 4.16e-18 | 77.4 |
| Msa0790640 | MtrunA17_Chr2g0280151 | 31.696 | 224 | 114 | 9 | 6 | 197 | 33 | 249 | 4.78e-17 | 78.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0790640 | AT3G53620.1 | 80.189 | 212 | 38 | 2 | 17 | 228 | 9 | 216 | 8.05e-125 | 352 |
| Msa0790640 | AT1G01050.1 | 81.000 | 200 | 37 | 1 | 29 | 228 | 14 | 212 | 3.27e-123 | 348 |
| Msa0790640 | AT1G01050.2 | 81.000 | 200 | 37 | 1 | 29 | 228 | 14 | 212 | 3.27e-123 | 348 |
| Msa0790640 | AT2G46860.1 | 75.455 | 220 | 48 | 2 | 9 | 228 | 3 | 216 | 3.02e-121 | 343 |
| Msa0790640 | AT2G18230.1 | 79.500 | 200 | 40 | 1 | 29 | 228 | 20 | 218 | 7.51e-119 | 337 |
| Msa0790640 | AT4G01480.1 | 78.000 | 200 | 43 | 1 | 29 | 228 | 18 | 216 | 2.55e-117 | 333 |
| Msa0790640 | AT4G01480.2 | 78.000 | 200 | 43 | 1 | 29 | 228 | 18 | 216 | 2.55e-117 | 333 |
| Msa0790640 | AT5G09650.1 | 31.937 | 191 | 105 | 6 | 29 | 197 | 72 | 259 | 6.16e-17 | 78.2 |
Find 64 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGTTCATTGTTGTTAT+TGG | 0.218964 | 5_3:+1518146 | None:intergenic |
| TCATCTTCACAAAGGGTTCT+TGG | 0.252123 | 5_3:+1516891 | None:intergenic |
| CAAGAAAAGTGGACTTATTA+AGG | 0.257685 | 5_3:-1517571 | Msa0790640:intron |
| TTCCTCCGTGCACGTGCTAT+TGG | 0.272225 | 5_3:-1516714 | Msa0790640:CDS |
| CCAAGATACTTTAGATGATA+TGG | 0.313590 | 5_3:-1515369 | Msa0790640:three_prime_UTR |
| AAATCATCATCAAGTGAAAA+TGG | 0.320291 | 5_3:-1518172 | Msa0790640:exon |
| TTATTGTAGGTGGTTGAAAT+TGG | 0.337416 | 5_3:-1517624 | Msa0790640:intron |
| CTTTCATTCAACGCAACAAC+TGG | 0.383599 | 5_3:+1518069 | None:intergenic |
| CAAAAGATTTAGGCGTCAAT+TGG | 0.397892 | 5_3:+1515434 | None:intergenic |
| TGAAATTAGAAGATTCTTTG+AGG | 0.414965 | 5_3:-1515967 | Msa0790640:CDS |
| TCCTTGTAATGGCGGTACTC+AGG | 0.424425 | 5_3:+1516020 | None:intergenic |
| CCATATCATCTAAAGTATCT+TGG | 0.427749 | 5_3:+1515369 | None:intergenic |
| GTTGTCTATCCACATAACTA+TGG | 0.433655 | 5_3:-1516921 | Msa0790640:CDS |
| ACCAGCTGAAGCTGCTGTTA+AGG | 0.443366 | 5_3:-1515749 | Msa0790640:CDS |
| TCGCGCTATGCTACAATGAT+TGG | 0.451765 | 5_3:-1515463 | Msa0790640:three_prime_UTR |
| CCATGGCATGACTTAGAGAT+TGG | 0.459125 | 5_3:-1518003 | Msa0790640:intron |
| GCCTTAACAGCAGCTTCAGC+TGG | 0.472264 | 5_3:+1515748 | None:intergenic |
| GCTCCTTGATGTCCTTGTAA+TGG | 0.493887 | 5_3:+1516009 | None:intergenic |
| CTTATGTGGTCGGAAACTTA+AGG | 0.494470 | 5_3:-1515589 | Msa0790640:CDS |
| AACCGAAGAAAATGAATGAA+TGG | 0.494902 | 5_3:+1518299 | None:intergenic |
| TGAAAGAATACTTTCTTCCA+TGG | 0.509143 | 5_3:-1518052 | Msa0790640:CDS |
| GGGATCTTCATCTTCACAAA+GGG | 0.509751 | 5_3:+1516884 | None:intergenic |
| TTAGATGATATGGTAGTGTA+TGG | 0.510341 | 5_3:-1515359 | Msa0790640:three_prime_UTR |
| AATCAAATCCTACCCTCCTC+TGG | 0.511415 | 5_3:+1515290 | None:intergenic |
| TTGAAAACAGATGGAGCTCC+TGG | 0.514131 | 5_3:+1517878 | None:intergenic |
| TATGAACTCGACAAGAAAAG+TGG | 0.514162 | 5_3:-1517582 | Msa0790640:CDS |
| CTAATTTCAGCAAGCCTATG+TGG | 0.515314 | 5_3:+1515981 | None:intergenic |
| CCCTGAGTACCGCCATTACA+AGG | 0.516953 | 5_3:-1516021 | Msa0790640:CDS |
| TTATTACCTGCATCAGAACT+AGG | 0.520797 | 5_3:+1516853 | None:intergenic |
| ATCCTACCCTCCTCTGGAGG+GGG | 0.526776 | 5_3:+1515296 | None:intergenic |
| CTATATGCTGCTTATGTGGT+CGG | 0.528555 | 5_3:-1515599 | Msa0790640:CDS |
| CTTACACAATTGAAAACAGA+TGG | 0.534311 | 5_3:+1517869 | None:intergenic |
| AGCATCTTTCTTATCAGCCA+TGG | 0.534889 | 5_3:+1518035 | None:intergenic |
| GCTGAATAACTTAGGTTGAT+CGG | 0.541616 | 5_3:-1516959 | Msa0790640:intron |
| GAATAGGAGCCTGTGATACC+TGG | 0.543718 | 5_3:-1516741 | Msa0790640:intron |
| CCTTGTAATGGCGGTACTCA+GGG | 0.545314 | 5_3:+1516021 | None:intergenic |
| TTGTGAAGATGAAGATCCCT+TGG | 0.546662 | 5_3:-1516880 | Msa0790640:CDS |
| AAGATGCTGCTGCTCATCCA+TGG | 0.549543 | 5_3:-1518020 | Msa0790640:CDS |
| GGATCTATATGCTGCTTATG+TGG | 0.565028 | 5_3:-1515603 | Msa0790640:CDS |
| CCAATCTCTAAGTCATGCCA+TGG | 0.565311 | 5_3:+1518003 | None:intergenic |
| TATCATCTAAAGTATCTTGG+AGG | 0.565550 | 5_3:+1515372 | None:intergenic |
| GGAATAAAACCATAGTTATG+TGG | 0.568906 | 5_3:+1516912 | None:intergenic |
| AATCCTGTCACAGGGAGAGA+AGG | 0.570938 | 5_3:-1516075 | Msa0790640:intron |
| AAATCCTACCCTCCTCTGGA+GGG | 0.572627 | 5_3:+1515294 | None:intergenic |
| CAAATCCTACCCTCCTCTGG+AGG | 0.575980 | 5_3:+1515293 | None:intergenic |
| GGATGTCCTAGTTCTGATGC+AGG | 0.576726 | 5_3:-1516859 | Msa0790640:intron |
| AATCCTACCCTCCTCTGGAG+GGG | 0.581469 | 5_3:+1515295 | None:intergenic |
| AGGAAACAACCAGGTATCAC+AGG | 0.592281 | 5_3:+1516732 | None:intergenic |
| TCAAGGAGCTCCCTCCACAT+AGG | 0.592591 | 5_3:-1515995 | Msa0790640:CDS |
| CTACTGAGATAGTGAAGTAA+CGG | 0.594092 | 5_3:+1518360 | None:intergenic |
| CATCAGAACTAGGACATCCA+AGG | 0.602800 | 5_3:+1516863 | None:intergenic |
| TAGGTGGTTGAAATTGGCAA+AGG | 0.605186 | 5_3:-1517618 | Msa0790640:CDS |
| CCGCCATTACAAGGACATCA+AGG | 0.609112 | 5_3:-1516012 | Msa0790640:CDS |
| AGGGATCTTCATCTTCACAA+AGG | 0.609244 | 5_3:+1516883 | None:intergenic |
| TCAATCCAATAGCACGTGCA+CGG | 0.614476 | 5_3:+1516709 | None:intergenic |
| TCATTCAACGCAACAACTGG+AGG | 0.618816 | 5_3:+1518072 | None:intergenic |
| CGAAGAAAATGAATGAATGG+AGG | 0.626555 | 5_3:+1518302 | None:intergenic |
| CCTTGATGTCCTTGTAATGG+CGG | 0.630944 | 5_3:+1516012 | None:intergenic |
| ATCAGAACTAGGACATCCAA+GGG | 0.638473 | 5_3:+1516864 | None:intergenic |
| TTTCAGCAAGCCTATGTGGA+GGG | 0.639456 | 5_3:+1515985 | None:intergenic |
| ATTTCAGCAAGCCTATGTGG+AGG | 0.655457 | 5_3:+1515984 | None:intergenic |
| ATTGATGCCTATGATTGACC+AGG | 0.665376 | 5_3:-1516691 | Msa0790640:intron |
| CGTGCACGGAGGAAACAACC+AGG | 0.680684 | 5_3:+1516723 | None:intergenic |
| ATCCAATAGCACGTGCACGG+AGG | 0.699526 | 5_3:+1516712 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTGTTAATGTTTAATGTTT+AGG | - | chr5_3:1516337-1516356 | Msa0790640:intron | 15.0% |
| !!! | ATTTTCTTAAATCATTTGTT+AGG | - | chr5_3:1516548-1516567 | Msa0790640:intron | 15.0% |
| !! | AAAAACAAATCAAAAGATTT+AGG | + | chr5_3:1518247-1518266 | None:intergenic | 15.0% |
| !!! | TCAATTTTACATGTTTGTAT+AGG | - | chr5_3:1515462-1515481 | Msa0790640:three_prime_UTR | 20.0% |
| !!! | GATAATTAAACATTTTCGTA+AGG | - | chr5_3:1515876-1515895 | Msa0790640:intron | 20.0% |
| !! | AAACAAATCCTTAATAAATG+TGG | - | chr5_3:1515963-1515982 | Msa0790640:intron | 20.0% |
| !! | ACGATTGAAAAGTTATAATT+GGG | + | chr5_3:1516139-1516158 | None:intergenic | 20.0% |
| !! | AACGATTGAAAAGTTATAAT+TGG | + | chr5_3:1516140-1516159 | None:intergenic | 20.0% |
| !!! | AAATGAATCAACCATATTTT+CGG | + | chr5_3:1516177-1516196 | None:intergenic | 20.0% |
| !!! | TATAAAGGTCATTTCTTTTA+AGG | - | chr5_3:1516207-1516226 | Msa0790640:intron | 20.0% |
| !!! | ATAAAGGTCATTTCTTTTAA+GGG | - | chr5_3:1516208-1516227 | Msa0790640:intron | 20.0% |
| !! | AAAATATCAGATACAATCTA+GGG | + | chr5_3:1517123-1517142 | None:intergenic | 20.0% |
| !! | TAAAATATCAGATACAATCT+AGG | + | chr5_3:1517124-1517143 | None:intergenic | 20.0% |
| !! | ATGAATCATTTGATCATTAA+TGG | + | chr5_3:1517998-1518017 | None:intergenic | 20.0% |
| ! | CTTTATTAGACAACAAGTTA+TGG | + | chr5_3:1515421-1515440 | None:intergenic | 25.0% |
| ! | AAATCATCATCAAGTGAAAA+TGG | - | chr5_3:1515496-1515515 | Msa0790640:three_prime_UTR | 25.0% |
| !! | TTCTTGTTCATTGTTGTTAT+TGG | + | chr5_3:1515525-1515544 | None:intergenic | 25.0% |
| ! | ATTCATGCATAATATTGCTT+AGG | - | chr5_3:1515850-1515869 | Msa0790640:intron | 25.0% |
| ! | TTCATGCATAATATTGCTTA+GGG | - | chr5_3:1515851-1515870 | Msa0790640:intron | 25.0% |
| ! | TGAGATTACCACATTTATTA+AGG | + | chr5_3:1515974-1515993 | None:intergenic | 25.0% |
| !! | AATATGGTTGATTCATTTGA+TGG | - | chr5_3:1516179-1516198 | Msa0790640:intron | 25.0% |
| !! | ATATGGTTGATTCATTTGAT+GGG | - | chr5_3:1516180-1516199 | Msa0790640:intron | 25.0% |
| ! | CATTTGATGGGAAAATATAA+AGG | - | chr5_3:1516192-1516211 | Msa0790640:intron | 25.0% |
| ! | ATAAGTCCTCACAATTAATT+TGG | + | chr5_3:1516268-1516287 | None:intergenic | 25.0% |
| ! | AAGCTTAGACATGTAAAATA+TGG | + | chr5_3:1516306-1516325 | None:intergenic | 25.0% |
| !! | TTTTACATGTCTAAGCTTTT+AGG | - | chr5_3:1516308-1516327 | Msa0790640:intron | 25.0% |
| ! | AAACATTATCTACATAAAGC+AGG | + | chr5_3:1516633-1516652 | None:intergenic | 25.0% |
| !! | GCTTTATGTAGATAATGTTT+TGG | - | chr5_3:1516633-1516652 | Msa0790640:intron | 25.0% |
| !!! | CTTATTTTGAAGCTAGTTTA+TGG | - | chr5_3:1516849-1516868 | Msa0790640:intron | 25.0% |
| !!! | TTGAAACTTGTGTTTTGAAT+AGG | - | chr5_3:1516911-1516930 | Msa0790640:CDS | 25.0% |
| ! | TAATCTTCATTTCAAATCAC+AGG | + | chr5_3:1517095-1517114 | None:intergenic | 25.0% |
| ! | GTAAGGGATTAAAATGTTAA+TGG | + | chr5_3:1517169-1517188 | None:intergenic | 25.0% |
| ! | CTCTTAAGCTAAAATTGTAA+GGG | + | chr5_3:1517185-1517204 | None:intergenic | 25.0% |
| ! | ACTCTTAAGCTAAAATTGTA+AGG | + | chr5_3:1517186-1517205 | None:intergenic | 25.0% |
| ! | TGAAATTAGAAGATTCTTTG+AGG | - | chr5_3:1517701-1517720 | Msa0790640:intron | 25.0% |
| ! | CTCCATTCATTCATTTTCTT+CGG | - | chr5_3:1515367-1515386 | Msa0790640:three_prime_UTR | 30.0% |
| AACCGAAGAAAATGAATGAA+TGG | + | chr5_3:1515372-1515391 | None:intergenic | 30.0% | |
| TGAAAGAATACTTTCTTCCA+TGG | - | chr5_3:1515616-1515635 | Msa0790640:intron | 30.0% | |
| CTTTCAATTCTCATAAATGC+AGG | - | chr5_3:1515766-1515785 | Msa0790640:CDS | 30.0% | |
| CTTACACAATTGAAAACAGA+TGG | + | chr5_3:1515802-1515821 | None:intergenic | 30.0% | |
| TAACAAATCTGTCCCATTAA+TGG | - | chr5_3:1516005-1516024 | Msa0790640:CDS | 30.0% | |
| TTATTGTAGGTGGTTGAAAT+TGG | - | chr5_3:1516044-1516063 | Msa0790640:CDS | 30.0% | |
| ! | CAAGAAAAGTGGACTTATTA+AGG | - | chr5_3:1516097-1516116 | Msa0790640:intron | 30.0% |
| TTCATCTGATTCCGAAAATA+TGG | - | chr5_3:1516163-1516182 | Msa0790640:intron | 30.0% | |
| ATTCTGCCAAATTAATTGTG+AGG | - | chr5_3:1516259-1516278 | Msa0790640:intron | 30.0% | |
| !! | TTAATGTTTAGGTTGCAAAG+TGG | - | chr5_3:1516348-1516367 | Msa0790640:intron | 30.0% |
| !! | GTGTCATTTATAGTATAGAC+AGG | - | chr5_3:1516370-1516389 | Msa0790640:intron | 30.0% |
| TAGACAGGTAGAAGTTAAAA+AGG | - | chr5_3:1516385-1516404 | Msa0790640:intron | 30.0% | |
| CAAATACTTTGAATGCATTG+TGG | - | chr5_3:1516413-1516432 | Msa0790640:intron | 30.0% | |
| CTCAATAGTTATTGAGCTAT+AGG | - | chr5_3:1516585-1516604 | Msa0790640:intron | 30.0% | |
| TATTGAGCTATAGGATGTTT+CGG | - | chr5_3:1516594-1516613 | Msa0790640:intron | 30.0% | |
| !!! | GTAGATAATGTTTTGGTTTC+TGG | - | chr5_3:1516640-1516659 | Msa0790640:intron | 30.0% |
| GGAATAAAACCATAGTTATG+TGG | + | chr5_3:1516759-1516778 | None:intergenic | 30.0% | |
| TGAATTATACTTCAACTCTG+TGG | - | chr5_3:1517065-1517084 | Msa0790640:intron | 30.0% | |
| TAGCTTAAGAGTCATATGAT+TGG | - | chr5_3:1517194-1517213 | Msa0790640:intron | 30.0% | |
| AAGAGTCATATGATTGGAAT+AGG | - | chr5_3:1517200-1517219 | Msa0790640:intron | 30.0% | |
| AAATTGTTGCACGCATTATT+TGG | - | chr5_3:1517270-1517289 | Msa0790640:intron | 30.0% | |
| TTATTTGGCAATACCATTAG+AGG | - | chr5_3:1517285-1517304 | Msa0790640:intron | 30.0% | |
| TATTTGGCAATACCATTAGA+GGG | - | chr5_3:1517286-1517305 | Msa0790640:intron | 30.0% | |
| !! | CAATGGCAAAAGCATTTAAA+GGG | + | chr5_3:1517802-1517821 | None:intergenic | 30.0% |
| !! | TCAATGGCAAAAGCATTTAA+AGG | + | chr5_3:1517803-1517822 | None:intergenic | 30.0% |
| AATAGCACTAACAGAATCAA+TGG | + | chr5_3:1517819-1517838 | None:intergenic | 30.0% | |
| TAAGGACACACAACATATAT+GGG | + | chr5_3:1517842-1517861 | None:intergenic | 30.0% | |
| TTAAGGACACACAACATATA+TGG | + | chr5_3:1517843-1517862 | None:intergenic | 30.0% | |
| ! | TATCATCTAAAGTATCTTGG+AGG | + | chr5_3:1518299-1518318 | None:intergenic | 30.0% |
| ! | CCATATCATCTAAAGTATCT+TGG | + | chr5_3:1518302-1518321 | None:intergenic | 30.0% |
| CCAAGATACTTTAGATGATA+TGG | - | chr5_3:1518299-1518318 | Msa0790640:intron | 30.0% | |
| ! | TTAGATGATATGGTAGTGTA+TGG | - | chr5_3:1518309-1518328 | Msa0790640:five_prime_UTR | 30.0% |
| CTACTGAGATAGTGAAGTAA+CGG | + | chr5_3:1515311-1515330 | None:intergenic | 35.0% | |
| CGAAGAAAATGAATGAATGG+AGG | + | chr5_3:1515369-1515388 | None:intergenic | 35.0% | |
| TGTCCCATTAATGGTGTAAA+GGG | - | chr5_3:1516014-1516033 | Msa0790640:CDS | 35.0% | |
| ATCCCCTTTACACCATTAAT+GGG | + | chr5_3:1516020-1516039 | None:intergenic | 35.0% | |
| AATCCCCTTTACACCATTAA+TGG | + | chr5_3:1516021-1516040 | None:intergenic | 35.0% | |
| AAAGGGGATTCTGTTATTGT+AGG | - | chr5_3:1516031-1516050 | Msa0790640:CDS | 35.0% | |
| TATGAACTCGACAAGAAAAG+TGG | - | chr5_3:1516086-1516105 | Msa0790640:intron | 35.0% | |
| ATTTGGCAGAATCGTAGAAA+TGG | + | chr5_3:1516251-1516270 | None:intergenic | 35.0% | |
| GTAAAATATGGTGCTTGCAA+AGG | + | chr5_3:1516294-1516313 | None:intergenic | 35.0% | |
| ! | TCTGAAGCATAGCTAACAAA+TGG | - | chr5_3:1516686-1516705 | Msa0790640:intron | 35.0% |
| CTGAAGCATAGCTAACAAAT+GGG | - | chr5_3:1516687-1516706 | Msa0790640:intron | 35.0% | |
| !! | ACAAATGGGCTGAATAACTT+AGG | - | chr5_3:1516701-1516720 | Msa0790640:CDS | 35.0% |
| !! | GCTGAATAACTTAGGTTGAT+CGG | - | chr5_3:1516709-1516728 | Msa0790640:CDS | 35.0% |
| GTTGTCTATCCACATAACTA+TGG | - | chr5_3:1516747-1516766 | Msa0790640:intron | 35.0% | |
| TTATTACCTGCATCAGAACT+AGG | + | chr5_3:1516818-1516837 | None:intergenic | 35.0% | |
| ! | ACTTTTACCTGGTCAATCAT+AGG | + | chr5_3:1516987-1517006 | None:intergenic | 35.0% |
| ! | CCATTTTCTTTTACTCTCAG+AGG | + | chr5_3:1517242-1517261 | None:intergenic | 35.0% |
| ! | CCTCTGAGAGTAAAAGAAAA+TGG | - | chr5_3:1517239-1517258 | Msa0790640:intron | 35.0% |
| GAGTAAAAGAAAATGGTGCA+AGG | - | chr5_3:1517246-1517265 | Msa0790640:intron | 35.0% | |
| AACAGCTTAAGCTTATGAGT+AGG | + | chr5_3:1517338-1517357 | None:intergenic | 35.0% | |
| TTTGAATAATGCAACCAGCA+TGG | - | chr5_3:1517395-1517414 | Msa0790640:intron | 35.0% | |
| ! | AGAATGTCTGGTTCATGATT+TGG | + | chr5_3:1517459-1517478 | None:intergenic | 35.0% |
| !! | TAGTAAGCTTCTAGAATGTC+TGG | + | chr5_3:1517471-1517490 | None:intergenic | 35.0% |
| AGCTCTTCATTGCAAATAAC+AGG | + | chr5_3:1517734-1517753 | None:intergenic | 35.0% | |
| !! | CAAAAGCATTTAAAGGGTCA+TGG | + | chr5_3:1517796-1517815 | None:intergenic | 35.0% |
| TTGTCTAGTGTGGAAAGTTA+AGG | + | chr5_3:1517860-1517879 | None:intergenic | 35.0% | |
| ATATAGATCCCTGCAAAAAG+GGG | + | chr5_3:1518055-1518074 | None:intergenic | 35.0% | |
| CATATAGATCCCTGCAAAAA+GGG | + | chr5_3:1518056-1518075 | None:intergenic | 35.0% | |
| !!! | GAAGTGACTTTTTTGCATAC+TGG | - | chr5_3:1518101-1518120 | Msa0790640:CDS | 35.0% |
| CAAAAGATTTAGGCGTCAAT+TGG | + | chr5_3:1518237-1518256 | None:intergenic | 35.0% | |
| CTTTCATTCAACGCAACAAC+TGG | + | chr5_3:1515602-1515621 | None:intergenic | 40.0% | |
| AGCATCTTTCTTATCAGCCA+TGG | + | chr5_3:1515636-1515655 | None:intergenic | 40.0% | |
| ATTCTCATAAATGCAGGACC+AGG | - | chr5_3:1515772-1515791 | Msa0790640:CDS | 40.0% | |
| CTGTCCCATTAATGGTGTAA+AGG | - | chr5_3:1516013-1516032 | Msa0790640:CDS | 40.0% | |
| GTCCCATTAATGGTGTAAAG+GGG | - | chr5_3:1516015-1516034 | Msa0790640:CDS | 40.0% | |
| TAGGTGGTTGAAATTGGCAA+AGG | - | chr5_3:1516050-1516069 | Msa0790640:CDS | 40.0% | |
| AGCTATGTACTTCAGATCGA+AGG | - | chr5_3:1516456-1516475 | Msa0790640:intron | 40.0% | |
| !! | GTGTTCGGTGTTCAATACAT+CGG | - | chr5_3:1516480-1516499 | Msa0790640:intron | 40.0% |
| CTGAATGCAATCACATGTGT+TGG | + | chr5_3:1516520-1516539 | None:intergenic | 40.0% | |
| TCATCTTCACAAAGGGTTCT+TGG | + | chr5_3:1516780-1516799 | None:intergenic | 40.0% | |
| GGGATCTTCATCTTCACAAA+GGG | + | chr5_3:1516787-1516806 | None:intergenic | 40.0% | |
| AGGGATCTTCATCTTCACAA+AGG | + | chr5_3:1516788-1516807 | None:intergenic | 40.0% | |
| TTGTGAAGATGAAGATCCCT+TGG | - | chr5_3:1516788-1516807 | Msa0790640:intron | 40.0% | |
| ATCAGAACTAGGACATCCAA+GGG | + | chr5_3:1516807-1516826 | None:intergenic | 40.0% | |
| ATTGATGCCTATGATTGACC+AGG | - | chr5_3:1516977-1516996 | Msa0790640:intron | 40.0% | |
| ! | AGTGGGAAACAACTTTTACC+TGG | + | chr5_3:1516998-1517017 | None:intergenic | 40.0% |
| TTTCACGTTGATCCCTCTAA+TGG | + | chr5_3:1517301-1517320 | None:intergenic | 40.0% | |
| GACAAAAGTTTGATCCATGC+TGG | + | chr5_3:1517412-1517431 | None:intergenic | 40.0% | |
| GGAAAAGTCAAAGCATGTCA+TGG | + | chr5_3:1517565-1517584 | None:intergenic | 40.0% | |
| CTAATTTCAGCAAGCCTATG+TGG | + | chr5_3:1517690-1517709 | None:intergenic | 40.0% | |
| CTCATTCTTCTTGTCTAGTG+TGG | + | chr5_3:1517870-1517889 | None:intergenic | 40.0% | |
| ACAAAGCATAGTAGCTCACA+TGG | + | chr5_3:1517957-1517976 | None:intergenic | 40.0% | |
| TATAGATCCCTGCAAAAAGG+GGG | + | chr5_3:1518054-1518073 | None:intergenic | 40.0% | |
| GCATATAGATCCCTGCAAAA+AGG | + | chr5_3:1518057-1518076 | None:intergenic | 40.0% | |
| ! | GGATCTATATGCTGCTTATG+TGG | - | chr5_3:1518065-1518084 | Msa0790640:CDS | 40.0% |
| ! | CTATATGCTGCTTATGTGGT+CGG | - | chr5_3:1518069-1518088 | Msa0790640:CDS | 40.0% |
| CTTATGTGGTCGGAAACTTA+AGG | - | chr5_3:1518079-1518098 | Msa0790640:CDS | 40.0% | |
| ! | TTTAAAATTTCCCCCTCCAG+AGG | - | chr5_3:1518362-1518381 | Msa0790640:five_prime_UTR | 40.0% |
| TCATTCAACGCAACAACTGG+AGG | + | chr5_3:1515599-1515618 | None:intergenic | 45.0% | |
| CCAATCTCTAAGTCATGCCA+TGG | + | chr5_3:1515668-1515687 | None:intergenic | 45.0% | |
| CCATGGCATGACTTAGAGAT+TGG | - | chr5_3:1515665-1515684 | Msa0790640:intron | 45.0% | |
| TTGAAAACAGATGGAGCTCC+TGG | + | chr5_3:1515793-1515812 | None:intergenic | 45.0% | |
| GGGGATTCTGTTATTGTAGG+TGG | - | chr5_3:1516034-1516053 | Msa0790640:CDS | 45.0% | |
| ! | CTTCAGATCGAAGGTGTGTT+CGG | - | chr5_3:1516465-1516484 | Msa0790640:intron | 45.0% |
| CATCAGAACTAGGACATCCA+AGG | + | chr5_3:1516808-1516827 | None:intergenic | 45.0% | |
| AGGAAACAACCAGGTATCAC+AGG | + | chr5_3:1516939-1516958 | None:intergenic | 45.0% | |
| TCAATCCAATAGCACGTGCA+CGG | + | chr5_3:1516962-1516981 | None:intergenic | 45.0% | |
| TCCCATTGAATCCTGTCACA+GGG | - | chr5_3:1517585-1517604 | Msa0790640:CDS | 45.0% | |
| TCCCTGTGACAGGATTCAAT+GGG | + | chr5_3:1517589-1517608 | None:intergenic | 45.0% | |
| CCTTGATGTCCTTGTAATGG+CGG | + | chr5_3:1517659-1517678 | None:intergenic | 45.0% | |
| GCTCCTTGATGTCCTTGTAA+TGG | + | chr5_3:1517662-1517681 | None:intergenic | 45.0% | |
| TTTCAGCAAGCCTATGTGGA+GGG | + | chr5_3:1517686-1517705 | None:intergenic | 45.0% | |
| ATTTCAGCAAGCCTATGTGG+AGG | + | chr5_3:1517687-1517706 | None:intergenic | 45.0% | |
| ! | TTCTCTTTCCCCCTTTTTGC+AGG | - | chr5_3:1518043-1518062 | Msa0790640:CDS | 45.0% |
| ! | TCTCTTTCCCCCTTTTTGCA+GGG | - | chr5_3:1518044-1518063 | Msa0790640:CDS | 45.0% |
| TCGCGCTATGCTACAATGAT+TGG | - | chr5_3:1518205-1518224 | Msa0790640:intron | 45.0% | |
| AAGATGCTGCTGCTCATCCA+TGG | - | chr5_3:1515648-1515667 | Msa0790640:intron | 50.0% | |
| !! | GGATGTCCTAGTTCTGATGC+AGG | - | chr5_3:1516809-1516828 | Msa0790640:intron | 50.0% |
| GAATAGGAGCCTGTGATACC+TGG | - | chr5_3:1516927-1516946 | Msa0790640:CDS | 50.0% | |
| CTGTGACAGGATTCAATGGG+AGG | + | chr5_3:1517586-1517605 | None:intergenic | 50.0% | |
| CTCCCATTGAATCCTGTCAC+AGG | - | chr5_3:1517584-1517603 | Msa0790640:CDS | 50.0% | |
| CTCCCTGTGACAGGATTCAA+TGG | + | chr5_3:1517590-1517609 | None:intergenic | 50.0% | |
| AATCCTGTCACAGGGAGAGA+AGG | - | chr5_3:1517593-1517612 | Msa0790640:CDS | 50.0% | |
| CCTTGTAATGGCGGTACTCA+GGG | + | chr5_3:1517650-1517669 | None:intergenic | 50.0% | |
| TCCTTGTAATGGCGGTACTC+AGG | + | chr5_3:1517651-1517670 | None:intergenic | 50.0% | |
| CCGCCATTACAAGGACATCA+AGG | - | chr5_3:1517656-1517675 | Msa0790640:intron | 50.0% | |
| ACCAGCTGAAGCTGCTGTTA+AGG | - | chr5_3:1517919-1517938 | Msa0790640:intron | 50.0% | |
| AAAATTTCCCCCTCCAGAGG+AGG | - | chr5_3:1518365-1518384 | Msa0790640:five_prime_UTR | 50.0% | |
| AAATTTCCCCCTCCAGAGGA+GGG | - | chr5_3:1518366-1518385 | Msa0790640:five_prime_UTR | 50.0% | |
| AAATCCTACCCTCCTCTGGA+GGG | + | chr5_3:1518377-1518396 | None:intergenic | 50.0% | |
| TTCCTCCGTGCACGTGCTAT+TGG | - | chr5_3:1516954-1516973 | Msa0790640:intron | 55.0% | |
| ATCCAATAGCACGTGCACGG+AGG | + | chr5_3:1516959-1516978 | None:intergenic | 55.0% | |
| CGTGCACACATGCGCATGTA+TGG | - | chr5_3:1517027-1517046 | Msa0790640:intron | 55.0% | |
| CATCCTTCTCTCCCTGTGAC+AGG | + | chr5_3:1517599-1517618 | None:intergenic | 55.0% | |
| ! | CCCTGAGTACCGCCATTACA+AGG | - | chr5_3:1517647-1517666 | Msa0790640:intron | 55.0% |
| TCAAGGAGCTCCCTCCACAT+AGG | - | chr5_3:1517673-1517692 | Msa0790640:intron | 55.0% | |
| GCCTTAACAGCAGCTTCAGC+TGG | + | chr5_3:1517923-1517942 | None:intergenic | 55.0% | |
| ! | AATCCTACCCTCCTCTGGAG+GGG | + | chr5_3:1518376-1518395 | None:intergenic | 55.0% |
| CAAATCCTACCCTCCTCTGG+AGG | + | chr5_3:1518378-1518397 | None:intergenic | 55.0% | |
| CGTGCACGGAGGAAACAACC+AGG | + | chr5_3:1516948-1516967 | None:intergenic | 60.0% | |
| ! | ATCCTACCCTCCTCTGGAGG+GGG | + | chr5_3:1518375-1518394 | None:intergenic | 60.0% |
| TGTGCACGAGCGCGTGCAGT+GGG | + | chr5_3:1517015-1517034 | None:intergenic | 65.0% | |
| TTCCCCCTCCAGAGGAGGGT+AGG | - | chr5_3:1518370-1518389 | Msa0790640:five_prime_UTR | 65.0% | |
| GTGTGCACGAGCGCGTGCAG+TGG | + | chr5_3:1517016-1517035 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 1515293 | 1518397 | 1515293 | ID=Msa0790640;Name=Msa0790640 |
| chr5_3 | mRNA | 1515293 | 1518397 | 1515293 | ID=Msa0790640-mRNA-1;Parent=Msa0790640;Name=Msa0790640-mRNA-1;_AED=0.11;_eAED=0.11;_QI=127|1|1|1|0.87|0.77|9|290|228 |
| chr5_3 | exon | 1515293 | 1515625 | 1515293 | ID=Msa0790640-mRNA-1:exon:594;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1515733 | 1515814 | 1515733 | ID=Msa0790640-mRNA-1:exon:593;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1515964 | 1516084 | 1515964 | ID=Msa0790640-mRNA-1:exon:592;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1516692 | 1516757 | 1516692 | ID=Msa0790640-mRNA-1:exon:591;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1516860 | 1516967 | 1516860 | ID=Msa0790640-mRNA-1:exon:590;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1517572 | 1517637 | 1517572 | ID=Msa0790640-mRNA-1:exon:589;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1517874 | 1517902 | 1517874 | ID=Msa0790640-mRNA-1:exon:588;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1518004 | 1518206 | 1518004 | ID=Msa0790640-mRNA-1:exon:587;Parent=Msa0790640-mRNA-1 |
| chr5_3 | exon | 1518302 | 1518397 | 1518302 | ID=Msa0790640-mRNA-1:exon:586;Parent=Msa0790640-mRNA-1 |
| chr5_3 | five_prime_UTR | 1518302 | 1518397 | 1518302 | ID=Msa0790640-mRNA-1:five_prime_utr;Parent=Msa0790640-mRNA-1 |
| chr5_3 | five_prime_UTR | 1518176 | 1518206 | 1518176 | ID=Msa0790640-mRNA-1:five_prime_utr;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1518004 | 1518175 | 1518004 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1517874 | 1517902 | 1517874 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1517572 | 1517637 | 1517572 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1516860 | 1516967 | 1516860 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1516692 | 1516757 | 1516692 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1515964 | 1516084 | 1515964 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1515733 | 1515814 | 1515733 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | CDS | 1515583 | 1515625 | 1515583 | ID=Msa0790640-mRNA-1:cds;Parent=Msa0790640-mRNA-1 |
| chr5_3 | three_prime_UTR | 1515293 | 1515582 | 1515293 | ID=Msa0790640-mRNA-1:three_prime_utr;Parent=Msa0790640-mRNA-1 |
| Gene Sequence |
| Protein sequence |
