AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0506220


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506220 MtrunA17_Chr3g0107471 90.276 617 51 5 1 614 1 611 0.0 1065
Msa0506220 MtrunA17_Chr3g0145531 30.268 261 116 7 390 622 210 432 7.27e-17 83.6
Msa0506220 MtrunA17_Chr3g0145531 33.679 193 113 7 8 187 6 196 1.18e-12 70.5
Msa0506220 MtrunA17_Chr3g0144601 28.352 261 121 6 390 622 210 432 2.12e-14 75.9
Msa0506220 MtrunA17_Chr3g0144601 33.679 193 113 7 8 187 6 196 1.06e-12 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0506220 AT1G15720.1 30.688 189 122 5 3 184 2 188 5.40e-15 77.8
Msa0506220 AT5G58340.2 27.972 286 171 11 3 272 2 268 6.45e-13 72.0
Msa0506220 AT5G58340.1 27.972 286 171 11 3 272 2 268 6.45e-13 72.0

Find 195 sgRNAs with CRISPR-Local

Find 467 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTCCATAGAACTTGATTTA+AGG 0.141175 3_4:-52422411 None:intergenic
AGAAGGCTCCTTGGCAAAAT+TGG 0.219221 3_4:-52422611 None:intergenic
TGTTTCATGATGGAAGATTT+TGG 0.227045 3_4:-52419358 None:intergenic
TATTTGAACCGTTCTTGTTT+TGG 0.254273 3_4:+52425848 Msa0506220:CDS
AGAAGGTTGTTAGAAGGTTT+GGG 0.274634 3_4:+52420011 Msa0506220:CDS
GAAGTGAGAGTTCGCACTTC+TGG 0.278590 3_4:+52420898 Msa0506220:CDS
GCGAGCTGGTACTTCTAGTA+TGG 0.291370 3_4:+52420319 Msa0506220:CDS
AAGGTGCGCTTTGGGATGTT+AGG 0.293183 3_4:+52419811 Msa0506220:CDS
TGATGGGAGGTTAGAAGGTT+TGG 0.294386 3_4:+52420768 Msa0506220:CDS
CTCCATAGAACTTGATTTAA+GGG 0.304778 3_4:-52422410 None:intergenic
AAGCGTGATGGGAGGTTAGA+AGG 0.309015 3_4:+52420763 Msa0506220:CDS
TTGGAGGGGAAGGGAGAGGC+GGG 0.313647 3_4:+52419740 Msa0506220:CDS
TAGAAGGTTGTTAGAAGGTT+TGG 0.315126 3_4:+52420010 Msa0506220:CDS
AATGGGAGAGTAGAAGGTTT+AGG 0.318960 3_4:+52420131 Msa0506220:CDS
GGAGGGGAAGGGAGAGGCGG+GGG 0.324847 3_4:+52419742 Msa0506220:CDS
AAACATTACAAACTGGATAA+TGG 0.328442 3_4:+52419395 Msa0506220:CDS
TTGGCATCATTAGGCTGATA+TGG 0.344084 3_4:-52422592 None:intergenic
TTTCGGCGGTGAAGAGGATT+TGG 0.346079 3_4:+52419721 Msa0506220:CDS
GTCCCTTAAATCAAGTTCTA+TGG 0.346935 3_4:+52422408 Msa0506220:CDS
GGGCGTAATGGGAGAGTAGA+AGG 0.350234 3_4:+52420125 Msa0506220:CDS
TACTTCTGTTGATGCGAATC+AGG 0.354114 3_4:+52420286 Msa0506220:CDS
ATGGGAGAGTAGAAGGTTTA+GGG 0.354705 3_4:+52420132 Msa0506220:CDS
TTTGGAGGGGAAGGGAGAGG+CGG 0.360995 3_4:+52419739 Msa0506220:CDS
GGGAGTAGAAGGTTGTTAGA+AGG 0.363398 3_4:+52420005 Msa0506220:CDS
GTGTTGGGCGATTGGAACTT+AGG 0.364577 3_4:+52425904 Msa0506220:CDS
GATGGGAGGTTAGAAGGTTT+GGG 0.367747 3_4:+52420769 Msa0506220:CDS
GGATTTGGAGGGGAAGGGAG+AGG 0.371997 3_4:+52419736 Msa0506220:CDS
TGGAGGGGAAGGGAGAGGCG+GGG 0.374471 3_4:+52419741 Msa0506220:CDS
TGTAGCCAATTTGGATCTTA+CGG 0.379477 3_4:-52422485 None:intergenic
ACAGGTTTGGAGAAGGAAAC+TGG 0.380097 3_4:+52423501 Msa0506220:intron
TGAAGCCGTAAGATCCAAAT+TGG 0.381380 3_4:+52422480 Msa0506220:CDS
AGAGATTGAAGGTGCGCTTT+GGG 0.383115 3_4:+52419803 Msa0506220:CDS
GCGACGATCATTACTGTAGT+TGG 0.383914 3_4:-52422680 None:intergenic
CTGTTTCTCCAATAGAAATT+CGG 0.385343 3_4:+52422236 Msa0506220:intron
CGGAGAGTGGAAGTAGGGTT+AGG 0.385447 3_4:-52419467 None:intergenic
GCTCGGGTGGTGGAATGTCG+AGG 0.390367 3_4:+52420102 Msa0506220:CDS
GTCAGCCAAGAAGGAAGAAA+AGG 0.392804 3_4:+52423279 Msa0506220:CDS
CGACGATCATTACTGTAGTT+GGG 0.393470 3_4:-52422679 None:intergenic
GGGGAGTGGGCTGGTGTCGG+AGG 0.394745 3_4:+52419761 Msa0506220:CDS
AAGAGATTGAAGGTGCGCTT+TGG 0.396331 3_4:+52419802 Msa0506220:CDS
CTTGCCCGTCGCATTAAGTT+GGG 0.404558 3_4:-52422703 None:intergenic
GAAGGGGAATGGTTTGTGTC+CGG 0.405618 3_4:+52419956 Msa0506220:CDS
AAATCATGGCAATGAAGAAT+TGG 0.405691 3_4:+52420250 Msa0506220:CDS
CAAGATGTTCGAGGATTTGA+AGG 0.416839 3_4:-52419572 None:intergenic
TTGGCAAAATTGGCATCATT+AGG 0.418185 3_4:-52422601 None:intergenic
CGACTACCATTACTACAGTT+AGG 0.429040 3_4:-52422655 None:intergenic
TGAACGAAAACATTACAAAC+TGG 0.429144 3_4:+52419388 Msa0506220:CDS
TGTTAGGGTTGCGGAGAGGT+TGG 0.429379 3_4:+52419827 Msa0506220:CDS
GATCGGGAACGGTGGTGTTA+CGG 0.434808 3_4:-52419428 None:intergenic
ATGCTGCTGAGGGGAGTAGA+AGG 0.436345 3_4:+52419994 Msa0506220:CDS
GCGAATATGGGCAACTTGAA+AGG 0.437533 3_4:+52425635 Msa0506220:CDS
GGTTGGTGGGGTTGAATACA+AGG 0.441539 3_4:+52419844 Msa0506220:CDS
TTTCTATCTCGAATGCGATT+CGG 0.443276 3_4:+52419619 Msa0506220:CDS
AAGGGGAATGGTTTGTGTCC+GGG 0.445060 3_4:+52419957 Msa0506220:CDS
AGAAGGTTTGGGGAAAGAGC+AGG 0.446728 3_4:+52420022 Msa0506220:CDS
TCTAACATGTGTTGGGCGAT+TGG 0.449830 3_4:+52425896 Msa0506220:CDS
TCAGATGTGTGCAATGCATC+AGG 0.450692 3_4:-52422460 None:intergenic
GAAGAGAATGGCTCGGGTGG+TGG 0.450981 3_4:+52420092 Msa0506220:CDS
TAGGGTTGCGGAGAGGTTGG+TGG 0.451418 3_4:+52419830 Msa0506220:CDS
CGAATATGGGCAACTTGAAA+GGG 0.456078 3_4:+52425636 Msa0506220:CDS
AGGGTTGCGGAGAGGTTGGT+GGG 0.456683 3_4:+52419831 Msa0506220:CDS
TCGGGTGGTGGAATGTCGAG+GGG 0.456994 3_4:+52420104 Msa0506220:CDS
AAATCGTGGCAATGAACAAT+TGG 0.458465 3_4:+52420876 Msa0506220:CDS
ACTTCTGGAATGAGAGATAA+AGG 0.459526 3_4:+52420913 Msa0506220:CDS
GAAAAGGAAATGGACTTCCT+TGG 0.461062 3_4:+52423295 Msa0506220:CDS
TTTGAAGAACGCGGAGGAGG+AGG 0.461533 3_4:-52419515 None:intergenic
AACATATTTGAATATAGAAA+TGG 0.466093 3_4:+52423548 Msa0506220:CDS
AATGATAATGATAATGTTGA+TGG 0.466238 3_4:+52420826 Msa0506220:CDS
ACTTGCCCGTCGCATTAAGT+TGG 0.466520 3_4:-52422704 None:intergenic
AAATCATGGTAATCAGCAAT+TGG 0.467432 3_4:+52420070 Msa0506220:CDS
TTGAATTAGGGGATCGGGAA+CGG 0.467490 3_4:-52419439 None:intergenic
TGAAGAGGATTTGGAGGGGA+AGG 0.471322 3_4:+52419730 Msa0506220:CDS
TGCTGATGTGAAGAAACTTC+GGG 0.472208 3_4:+52422384 Msa0506220:CDS
CACAGGGGAGTTAAACTCTC+TGG 0.478478 3_4:+52422307 Msa0506220:CDS
AAGATTTGAGGAAGCGTGAT+GGG 0.480627 3_4:+52420752 Msa0506220:CDS
TACTCACCAGACGGATCCTC+GGG 0.481693 3_4:-52419696 None:intergenic
TGACGATGATGTAGCATTGA+TGG 0.482752 3_4:+52420849 Msa0506220:CDS
TGTCTCTTCTAACATGTGTT+GGG 0.483761 3_4:+52425889 Msa0506220:CDS
CTCGGGTGGTGGAATGTCGA+GGG 0.488513 3_4:+52420103 Msa0506220:CDS
GAAGAGGATTTGGAGGGGAA+GGG 0.491160 3_4:+52419731 Msa0506220:CDS
CGCAACAAAGTCAGCCAAGA+AGG 0.491405 3_4:+52423270 Msa0506220:CDS
TACAATTCAGATCTCAAAGT+TGG 0.491521 3_4:-52425671 None:intergenic
ATACTCACCAGACGGATCCT+CGG 0.493420 3_4:-52419697 None:intergenic
AGATTGAAGCGGTGAGGACG+TGG 0.494020 3_4:-52419539 None:intergenic
ATGCGGTTGTTGAAGTGAAG+AGG 0.497546 3_4:+52419871 Msa0506220:CDS
CTGTCTCTTCTAACATGTGT+TGG 0.502528 3_4:+52425888 Msa0506220:CDS
TTCTATGGAGCTAAAAGCAT+TGG 0.504441 3_4:+52422423 Msa0506220:CDS
CGTGAATCGGCGCCGGAGAG+TGG 0.505542 3_4:-52419480 None:intergenic
AATTCGCCCGAGGATCCGTC+TGG 0.508384 3_4:+52419690 Msa0506220:CDS
GGAGAGTGGAAGTAGGGTTA+GGG 0.509768 3_4:-52419466 None:intergenic
CAAGAAGGAAGAAAAGGAAA+TGG 0.510534 3_4:+52423285 Msa0506220:CDS
GCTTTGGGATGTTAGGGTTG+CGG 0.510764 3_4:+52419818 Msa0506220:CDS
GAACGGTGGTGTTACGGAGG+AGG 0.514258 3_4:-52419422 None:intergenic
GCGATGGTTTCGAAGGGGAA+TGG 0.517229 3_4:+52419945 Msa0506220:CDS
GACTACCATTACTACAGTTA+GGG 0.519280 3_4:-52422654 None:intergenic
CGGCGGTGAAGAGGATTTGG+AGG 0.520447 3_4:+52419724 Msa0506220:CDS
ACAAGGAACAGAAGGCTCCT+TGG 0.522057 3_4:-52422620 None:intergenic
TGCTGTTGCGGTGGAATGTA+CGG 0.522490 3_4:+52419653 Msa0506220:CDS
GTTTCTTGATTTGATTGCGA+TGG 0.522727 3_4:+52419929 Msa0506220:CDS
ATATGTTGCTGTAAAAGTCT+AGG 0.524611 3_4:-52423532 None:intergenic
GTGCTGATGTGAAGAAACTT+CGG 0.526628 3_4:+52422383 Msa0506220:CDS
CCTTGGAAGAAGAGACACTA+AGG 0.527054 3_4:+52423312 Msa0506220:CDS
TGTTGGGCGATTGGAACTTA+GGG 0.530862 3_4:+52425905 Msa0506220:CDS
GTGTGCAATGCATCAGGAAG+AGG 0.534240 3_4:-52422454 None:intergenic
TTCTTATACAGGTTTGGAGA+AGG 0.534897 3_4:+52423494 Msa0506220:intron
AGGTGCGCTTTGGGATGTTA+GGG 0.535657 3_4:+52419812 Msa0506220:CDS
GGGTTTGAAGAACGCGGAGG+AGG 0.536346 3_4:-52419518 None:intergenic
TGCTTACTGTGCTGTTGCGG+TGG 0.537231 3_4:+52419644 Msa0506220:CDS
GTCGGAGGAGATGATGCAGT+GGG 0.537710 3_4:+52419776 Msa0506220:CDS
TTTGAGACGTGAATCGGCGC+CGG 0.540038 3_4:-52419487 None:intergenic
CCTTAGTGTCTCTTCTTCCA+AGG 0.542109 3_4:-52423312 None:intergenic
CGGGTGGTGGAATGTCGAGG+GGG 0.542853 3_4:+52420105 Msa0506220:CDS
TTGAAGAACGCGGAGGAGGA+GGG 0.543449 3_4:-52419514 None:intergenic
CGGAGGAGATGATGCAGTGG+GGG 0.543627 3_4:+52419778 Msa0506220:CDS
TGTTGATGCGAATCAGGAAG+TGG 0.544009 3_4:+52420292 Msa0506220:CDS
CTTCTTGGCTGACTTTGTTG+CGG 0.549683 3_4:-52423269 None:intergenic
TCGCCCCAACTTAATGCGAC+GGG 0.550818 3_4:+52422699 Msa0506220:CDS
CGGCGCCGGAGAGTGGAAGT+AGG 0.551999 3_4:-52419473 None:intergenic
GAGGATTTGAAGGGAGACTT+CGG 0.552616 3_4:-52419562 None:intergenic
AAATCTCTTCAAGATGTTCG+AGG 0.553739 3_4:-52419581 None:intergenic
GAAGATTTGAGGAAGCGTGA+TGG 0.556415 3_4:+52420751 Msa0506220:CDS
GAAGGTTGTTAGAAGGTTTG+GGG 0.557542 3_4:+52420012 Msa0506220:CDS
TTGATTGCGATGGTTTCGAA+GGG 0.559576 3_4:+52419939 Msa0506220:CDS
TTTGATTGCGATGGTTTCGA+AGG 0.560926 3_4:+52419938 Msa0506220:CDS
AATCAGCAATTGGAAGAGAA+TGG 0.564895 3_4:+52420080 Msa0506220:CDS
GAAGAGATTTACCGCGACGA+AGG 0.567781 3_4:+52419594 Msa0506220:CDS
GATCGCCCTAACTGTAGTAA+TGG 0.569075 3_4:+52422649 Msa0506220:CDS
ACATGTTAGAAGAGACAGTC+GGG 0.578643 3_4:-52425883 None:intergenic
CAATTGGAAGAGAATGGCTC+GGG 0.580408 3_4:+52420086 Msa0506220:CDS
AAGGAGAAAATGAATGATGA+TGG 0.580983 3_4:+52420793 Msa0506220:CDS
ACAACGATGGGTGAAAATCA+TGG 0.581871 3_4:+52420236 Msa0506220:CDS
AAAGAGAAAATGAATGATGA+TGG 0.582298 3_4:+52420155 Msa0506220:CDS
CAGGAAGTGGAACAGCGAGC+TGG 0.583358 3_4:+52420305 Msa0506220:CDS
GAAGAAGAGACACTAAGGGC+TGG 0.584293 3_4:+52423317 Msa0506220:CDS
GCAATTGGAAGAGAATGGCT+CGG 0.584680 3_4:+52420085 Msa0506220:CDS
GGCGCCGGAGAGTGGAAGTA+GGG 0.585546 3_4:-52419472 None:intergenic
GTCGCCCCAACTTAATGCGA+CGG 0.587509 3_4:+52422698 Msa0506220:CDS
CGAGCTGGTACTTCTAGTAT+GGG 0.587659 3_4:+52420320 Msa0506220:CDS
GGCGGTGAAGAGGATTTGGA+GGG 0.588504 3_4:+52419725 Msa0506220:CDS
TTGGAAGAGAATGGCTCGGG+TGG 0.589660 3_4:+52420089 Msa0506220:CDS
GACGATCATTACTGTAGTTG+GGG 0.590844 3_4:-52422678 None:intergenic
ATTTGAGGAAGCGTGATGGG+AGG 0.597213 3_4:+52420755 Msa0506220:CDS
GAGGTTAGAAGGTTTGGGAA+AGG 0.597583 3_4:+52420774 Msa0506220:CDS
ATTCAGATCTCAAAGTTGGT+AGG 0.599024 3_4:-52425667 None:intergenic
GAGTGCTTACTGTGCTGTTG+CGG 0.599604 3_4:+52419641 Msa0506220:CDS
GAAGAATTGGAAGACAGAGT+TGG 0.600001 3_4:+52420263 Msa0506220:CDS
GGTGAATGATGATGTAGCAA+TGG 0.608999 3_4:+52420043 Msa0506220:CDS
GTAGCAATGGGTGAAAATCA+TGG 0.609494 3_4:+52420056 Msa0506220:CDS
AGTTAAACTCTCTGGTGATG+AGG 0.611191 3_4:+52422315 Msa0506220:CDS
GGGTTGCGGAGAGGTTGGTG+GGG 0.611883 3_4:+52419832 Msa0506220:CDS
GTGAATGATGATGTAGCAAT+GGG 0.612467 3_4:+52420044 Msa0506220:CDS
CTAACCCTACTTCCACTCTC+CGG 0.617416 3_4:+52419468 Msa0506220:CDS
TGTTTGTGAAAATGCTGCTG+AGG 0.619713 3_4:+52419983 Msa0506220:CDS
ATAGAAATTCGGAAAGACAA+TGG 0.620587 3_4:+52422247 Msa0506220:intron
TTGCCCGTCGCATTAAGTTG+GGG 0.621336 3_4:-52422702 None:intergenic
TCACTACTACAAGGAACAGA+AGG 0.621390 3_4:-52422628 None:intergenic
GATGATGGTGATGATGAGAA+TGG 0.623693 3_4:+52420170 Msa0506220:CDS
CTACAAAAGATATAAATCGC+AGG 0.623762 3_4:+52422503 Msa0506220:CDS
TCGGAGGAGATGATGCAGTG+GGG 0.627606 3_4:+52419777 Msa0506220:CDS
GATTGAAGCGGTGAGGACGT+GGG 0.630623 3_4:-52419538 None:intergenic
GGTGTTTGTGAAATTGCTGA+AGG 0.632383 3_4:+52420724 Msa0506220:intron
GGAGGAGATGATGCAGTGGG+GGG 0.633051 3_4:+52419779 Msa0506220:CDS
GTGTTTGTGAAATTGCTGAA+GGG 0.634138 3_4:+52420725 Msa0506220:CDS
TGTTTGTGAAATTGCTGAAG+GGG 0.634167 3_4:+52420726 Msa0506220:CDS
AATTAGGGGATCGGGAACGG+TGG 0.641310 3_4:-52419436 None:intergenic
CGGGAACGGTGGTGTTACGG+AGG 0.642164 3_4:-52419425 None:intergenic
AAGATGTTCGAGGATTTGAA+GGG 0.644288 3_4:-52419571 None:intergenic
GATGATGATGTGACAACGAT+GGG 0.644343 3_4:+52420224 Msa0506220:CDS
CTTGGAAGAAGAGACACTAA+GGG 0.646858 3_4:+52423313 Msa0506220:CDS
GTTTGTGAAAATGCTGCTGA+GGG 0.652459 3_4:+52419984 Msa0506220:CDS
CTGCGTTCCCAAAACAAGAA+CGG 0.655309 3_4:-52425856 None:intergenic
TCTCTGGTGATGAGGAAGCG+AGG 0.659290 3_4:+52422323 Msa0506220:CDS
GGAGACTTCGGAGATTGAAG+CGG 0.660281 3_4:-52419550 None:intergenic
GATGATGTAGCATTGATGGA+TGG 0.662441 3_4:+52420853 Msa0506220:CDS
GGGAATGGTTTGTGTCCGGG+AGG 0.663088 3_4:+52419960 Msa0506220:CDS
TTAGGGCGATCACTACTACA+AGG 0.663670 3_4:-52422637 None:intergenic
TGTCGGAGGAGATGATGCAG+TGG 0.665693 3_4:+52419775 Msa0506220:CDS
TGATTGCGATGGTTTCGAAG+GGG 0.666531 3_4:+52419940 Msa0506220:CDS
GCTGGTACTTCTAGTATGGG+AGG 0.666874 3_4:+52420323 Msa0506220:CDS
GTTTGTGAAATTGCTGAAGG+GGG 0.671919 3_4:+52420727 Msa0506220:CDS
ATATTTGATTAATTCGCCCG+AGG 0.672056 3_4:+52419680 Msa0506220:CDS
CACATGTTAGAAGAGACAGT+CGG 0.680855 3_4:-52425884 None:intergenic
GTTGAATACAAGGAGAGATG+CGG 0.690966 3_4:+52419854 Msa0506220:CDS
CTTCGGAGATTGAAGCGGTG+AGG 0.694452 3_4:-52419545 None:intergenic
GGGATGTTAGGGTTGCGGAG+AGG 0.698750 3_4:+52419823 Msa0506220:CDS
CAGAGAGTTTAACTCCCCTG+TGG 0.700791 3_4:-52422306 None:intergenic
GCATTGATGGATGGAAATCG+TGG 0.732089 3_4:+52420862 Msa0506220:CDS
GGACGTGGGTTTGAAGAACG+CGG 0.739427 3_4:-52419524 None:intergenic
AGATAGAAACTCCTTCGTCG+CGG 0.740862 3_4:-52419605 None:intergenic
GCGGTGAAGAGGATTTGGAG+GGG 0.745177 3_4:+52419726 Msa0506220:CDS
CGTGGGTTTGAAGAACGCGG+AGG 0.751005 3_4:-52419521 None:intergenic
AAGTTATGCTCAAACATACG+AGG 0.752222 3_4:+52422723 Msa0506220:CDS
TGATGATGATGTGACAACGA+TGG 0.758926 3_4:+52420223 Msa0506220:CDS
TTTGTGAAAATGCTGCTGAG+GGG 0.761669 3_4:+52419985 Msa0506220:CDS
GGTTTGGAGAAGGAAACTGG+AGG 0.804663 3_4:+52423504 Msa0506220:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGATTTAAATTGTTATTAT+TGG + chr3_4:52421045-52421064 Msa0506220:intron 10.0%
!! AATGTAAATAATAATCAAAT+AGG - chr3_4:52422203-52422222 None:intergenic 10.0%
!! TTTAGTCATTAAATTAAACT+AGG + chr3_4:52420544-52420563 Msa0506220:intron 15.0%
!!! AGGATATTAGAATTTTTATA+AGG + chr3_4:52420687-52420706 Msa0506220:intron 15.0%
!!! GGATATTAGAATTTTTATAA+GGG + chr3_4:52420688-52420707 Msa0506220:intron 15.0%
!!! AATTGTTATTTTTGTAAGTT+TGG + chr3_4:52421079-52421098 Msa0506220:intron 15.0%
!! AATCAATTGTAATGTATATA+CGG + chr3_4:52421747-52421766 Msa0506220:intron 15.0%
!! TATTTAGTCGAAAAATTTAT+CGG - chr3_4:52422349-52422368 None:intergenic 15.0%
!!! GTTTTTTATTATCATTTAGA+TGG + chr3_4:52423104-52423123 Msa0506220:intron 15.0%
!! AACATATTTGAATATAGAAA+TGG + chr3_4:52423548-52423567 Msa0506220:CDS 15.0%
!!! TAAAATTGAAGTGTTATTAA+CGG - chr3_4:52423624-52423643 None:intergenic 15.0%
!!! CACTTCAATTTTATTATTTA+AGG + chr3_4:52423631-52423650 Msa0506220:intron 15.0%
!!! TTTGAAAACTAGATATATTT+TGG + chr3_4:52424356-52424375 Msa0506220:intron 15.0%
!!! GAATTATTATAAACTAGTTT+CGG - chr3_4:52425163-52425182 None:intergenic 15.0%
!! TCATTAAATTAAACTAGGTA+TGG + chr3_4:52420549-52420568 Msa0506220:intron 20.0%
!! TTTAGTTGCAAAAAATTTCT+CGG + chr3_4:52420627-52420646 Msa0506220:intron 20.0%
!!! AATGATAATGATAATGTTGA+TGG + chr3_4:52420826-52420845 Msa0506220:CDS 20.0%
!! AATTTCCTCAAAATAATACT+TGG + chr3_4:52420963-52420982 Msa0506220:intron 20.0%
!!! ATTTGTCATTTGATTGTTTT+GGG + chr3_4:52421385-52421404 Msa0506220:intron 20.0%
!! GATTGTAGATGAATAAATAA+AGG - chr3_4:52421707-52421726 None:intergenic 20.0%
!!! AAAACAATTATTTAAGACAC+CGG + chr3_4:52421888-52421907 Msa0506220:intron 20.0%
!! ATAGCTATCAATTAAAACTA+CGG + chr3_4:52422004-52422023 Msa0506220:intron 20.0%
!!! ACAAACATTTTTATGTTTGT+TGG + chr3_4:52422095-52422114 Msa0506220:intron 20.0%
!! ATTAGAACAGATAATTACAT+AGG - chr3_4:52422755-52422774 None:intergenic 20.0%
!!! TTGAATCATGGTTTTAAAAT+AGG + chr3_4:52423027-52423046 Msa0506220:intron 20.0%
!! TAATAAAAAACAACAGTTGA+GGG - chr3_4:52423095-52423114 None:intergenic 20.0%
!! ATAATAAAAAACAACAGTTG+AGG - chr3_4:52423096-52423115 None:intergenic 20.0%
!! ATTCACTATATTTCTTATAC+AGG + chr3_4:52423483-52423502 Msa0506220:intron 20.0%
!! AATTGCATTTCTAATGTTTA+TGG + chr3_4:52423761-52423780 Msa0506220:intron 20.0%
!! TCTAATGTTTATGGATAATT+TGG + chr3_4:52423770-52423789 Msa0506220:intron 20.0%
!! CTAATGTTTATGGATAATTT+GGG + chr3_4:52423771-52423790 Msa0506220:intron 20.0%
!! TGAACTGAAAAGAAAAAATA+GGG + chr3_4:52423894-52423913 Msa0506220:intron 20.0%
!! TTCAACTTCACTAAAAATTA+TGG - chr3_4:52424132-52424151 None:intergenic 20.0%
!! TAATCTCAAATATCAAACTA+AGG - chr3_4:52424158-52424177 None:intergenic 20.0%
!!! TTTTTGCTTATATTTCATTC+AGG - chr3_4:52424230-52424249 None:intergenic 20.0%
!! GAATGAAATATAAGCAAAAA+CGG + chr3_4:52424230-52424249 Msa0506220:intron 20.0%
!! TCCTGAAATATAAACAAAAA+GGG - chr3_4:52424317-52424336 None:intergenic 20.0%
!!! TTTTTAAGTAGACTTATTTG+AGG + chr3_4:52424636-52424655 Msa0506220:intron 20.0%
!!! ATAATGATAATTTTGATAGC+AGG + chr3_4:52424884-52424903 Msa0506220:intron 20.0%
!!! AACATATATCTGAAGTTTTA+TGG + chr3_4:52425117-52425136 Msa0506220:intron 20.0%
!!! ACTAGTTTATAATAATTCAG+TGG + chr3_4:52425165-52425184 Msa0506220:intron 20.0%
!! TCAGCAAGATAAAAAAATAT+TGG - chr3_4:52425255-52425274 None:intergenic 20.0%
!! ACATTTACATGAAAAACAAA+AGG - chr3_4:52425736-52425755 None:intergenic 20.0%
!!! TCATTTTTTGTGTTTCATGA+TGG - chr3_4:52419371-52419390 None:intergenic 25.0%
! AAACATTACAAACTGGATAA+TGG + chr3_4:52419395-52419414 Msa0506220:CDS 25.0%
! AAAGAGAAAATGAATGATGA+TGG + chr3_4:52420155-52420174 Msa0506220:CDS 25.0%
! AATCACTTCAAAACTAATGT+TGG + chr3_4:52420378-52420397 Msa0506220:intron 25.0%
!!! ATTTTAGTTTTTGCTGTGTA+AGG + chr3_4:52420430-52420449 Msa0506220:intron 25.0%
! AAACAATAGTGTGTATTTGA+AGG + chr3_4:52420487-52420506 Msa0506220:intron 25.0%
! AACAATAGTGTGTATTTGAA+GGG + chr3_4:52420488-52420507 Msa0506220:intron 25.0%
! CATTAGTCATTGTTTAAGTA+AGG + chr3_4:52420667-52420686 Msa0506220:intron 25.0%
!!! AATCTCCAAGTATTATTTTG+AGG - chr3_4:52420971-52420990 None:intergenic 25.0%
!! TTTCTCTTGTGTGTTTTATA+AGG + chr3_4:52421227-52421246 Msa0506220:intron 25.0%
! TTCAATAGTCATTGTTTAAG+TGG + chr3_4:52421298-52421317 Msa0506220:intron 25.0%
!! TGACAAATCTATTTTCTTTG+AGG - chr3_4:52421373-52421392 None:intergenic 25.0%
!!! GATTTGTCATTTGATTGTTT+TGG + chr3_4:52421384-52421403 Msa0506220:intron 25.0%
!!! TCCTACATTTTTTACATTAG+CGG - chr3_4:52421553-52421572 None:intergenic 25.0%
! TAACATATATGTAGTTGTGT+CGG - chr3_4:52421578-52421597 None:intergenic 25.0%
! TATGAGTTATATATAGGTGT+CGG + chr3_4:52421833-52421852 Msa0506220:intron 25.0%
! AATAATAATCAAATAGGCGT+AGG - chr3_4:52422197-52422216 None:intergenic 25.0%
!! TATATCTTTTGTAGCCAATT+TGG - chr3_4:52422497-52422516 None:intergenic 25.0%
! TGTAATTATCTGTTCTAATC+TGG + chr3_4:52422756-52422775 Msa0506220:intron 25.0%
! GTAATTATCTGTTCTAATCT+GGG + chr3_4:52422757-52422776 Msa0506220:intron 25.0%
! TAATTATCTGTTCTAATCTG+GGG + chr3_4:52422758-52422777 Msa0506220:intron 25.0%
! ATATTCATATGTTCTCACTA+AGG + chr3_4:52422795-52422814 Msa0506220:intron 25.0%
! TATTCATATGTTCTCACTAA+GGG + chr3_4:52422796-52422815 Msa0506220:intron 25.0%
! ATAGCTCACTAGAAAATTTA+TGG - chr3_4:52423386-52423405 None:intergenic 25.0%
! CTATATTTCTTATACAGGTT+TGG + chr3_4:52423488-52423507 Msa0506220:intron 25.0%
!! ATTATTTAAGGTTGATCTGA+AGG + chr3_4:52423643-52423662 Msa0506220:intron 25.0%
! CATTAGAAATGCAATTTGAA+AGG - chr3_4:52423757-52423776 None:intergenic 25.0%
! CGTTTAAAAAAGAAAGAATC+AGG - chr3_4:52423832-52423851 None:intergenic 25.0%
!!! TCTTTCTTTTTTAAACGAAG+AGG + chr3_4:52423835-52423854 Msa0506220:intron 25.0%
!!! CTTTCTTTTTTAAACGAAGA+GGG + chr3_4:52423836-52423855 Msa0506220:intron 25.0%
!!! TTTCTTTTTTAAACGAAGAG+GGG + chr3_4:52423837-52423856 Msa0506220:intron 25.0%
!!! TTTTTTCTTTTCAGTTCACA+AGG - chr3_4:52423892-52423911 None:intergenic 25.0%
! GTGAACTGAAAAGAAAAAAT+AGG + chr3_4:52423893-52423912 Msa0506220:intron 25.0%
! TCTGAAAAAATTCAGTACAT+TGG + chr3_4:52423953-52423972 Msa0506220:intron 25.0%
! ACTAAAAATTATGGTCTGAT+TGG - chr3_4:52424123-52424142 None:intergenic 25.0%
! GATGTACTTGTTTAAAAGTT+AGG + chr3_4:52424266-52424285 Msa0506220:intron 25.0%
!!! ACCCTTTTTGTTTATATTTC+AGG + chr3_4:52424313-52424332 Msa0506220:intron 25.0%
! GTCCTGAAATATAAACAAAA+AGG - chr3_4:52424318-52424337 None:intergenic 25.0%
!! GCTCATTAAACAAAAAGTAT+TGG + chr3_4:52424683-52424702 Msa0506220:intron 25.0%
!! TTATAAACTAGTTTCGGAAA+AGG - chr3_4:52425157-52425176 None:intergenic 25.0%
! TCTTGCTGAAAAATCTATTA+TGG + chr3_4:52425266-52425285 Msa0506220:intron 25.0%
! TACAATGCATCAATTTGTAT+GGG - chr3_4:52425472-52425491 None:intergenic 25.0%
! ATACAATGCATCAATTTGTA+TGG - chr3_4:52425473-52425492 None:intergenic 25.0%
! ATAGAATTACAAACATAACC+TGG + chr3_4:52425491-52425510 Msa0506220:intron 25.0%
!! CAAATTGAGTAGTATTTTAC+TGG + chr3_4:52425537-52425556 Msa0506220:intron 25.0%
!! GTTTATCTTTTTGCGAATAT+GGG + chr3_4:52425623-52425642 Msa0506220:CDS 25.0%
!! TTTCATGATGGAAGATTTTG+GGG - chr3_4:52419359-52419378 None:intergenic 30.0%
!! GTTTCATGATGGAAGATTTT+GGG - chr3_4:52419360-52419379 None:intergenic 30.0%
!! TGTTTCATGATGGAAGATTT+TGG - chr3_4:52419361-52419380 None:intergenic 30.0%
TGAACGAAAACATTACAAAC+TGG + chr3_4:52419388-52419407 Msa0506220:CDS 30.0%
!!! GTTAGGGTTTTTTGAATTAG+GGG - chr3_4:52419453-52419472 None:intergenic 30.0%
!!! GGTTAGGGTTTTTTGAATTA+GGG - chr3_4:52419454-52419473 None:intergenic 30.0%
AAATCATGGTAATCAGCAAT+TGG + chr3_4:52420070-52420089 Msa0506220:CDS 30.0%
AAATCATGGCAATGAAGAAT+TGG + chr3_4:52420250-52420269 Msa0506220:CDS 30.0%
! TCTCTCTTGTGTGTTTTATA+AGG + chr3_4:52420593-52420612 Msa0506220:intron 30.0%
! CTCTCTTGTGTGTTTTATAA+GGG + chr3_4:52420594-52420613 Msa0506220:intron 30.0%
AAGGAGAAAATGAATGATGA+TGG + chr3_4:52420793-52420812 Msa0506220:CDS 30.0%
ATGCAGTTACTTAAACCTTT+AGG - chr3_4:52421141-52421160 None:intergenic 30.0%
TAATCATGCAACTAGCTATA+TGG + chr3_4:52421181-52421200 Msa0506220:intron 30.0%
AGTCATTGTTTAAGTGGTTA+TGG + chr3_4:52421304-52421323 Msa0506220:intron 30.0%
GTCATTGTTTAAGTGGTTAT+GGG + chr3_4:52421305-52421324 Msa0506220:intron 30.0%
! TTTGTTTGTGTTGCCTTTTA+AGG + chr3_4:52421451-52421470 Msa0506220:intron 30.0%
GATAGTAACAACACCTTAAA+AGG - chr3_4:52421467-52421486 None:intergenic 30.0%
TACTATCAATCTATGAAGCA+TGG + chr3_4:52421480-52421499 Msa0506220:intron 30.0%
ACCGCTAATGTAAAAAATGT+AGG + chr3_4:52421549-52421568 Msa0506220:intron 30.0%
! TAATTGATAGCTATGAAGCA+CGG - chr3_4:52421998-52422017 None:intergenic 30.0%
AACATGACATTGATATCATG+TGG - chr3_4:52422072-52422091 None:intergenic 30.0%
! CTGTTTCTCCAATAGAAATT+CGG + chr3_4:52422236-52422255 Msa0506220:intron 30.0%
TTGTCTTTCCGAATTTCTAT+TGG - chr3_4:52422247-52422266 None:intergenic 30.0%
ATAGAAATTCGGAAAGACAA+TGG + chr3_4:52422247-52422266 Msa0506220:intron 30.0%
CTCCATAGAACTTGATTTAA+GGG - chr3_4:52422413-52422432 None:intergenic 30.0%
CTACAAAAGATATAAATCGC+AGG + chr3_4:52422503-52422522 Msa0506220:CDS 30.0%
AATTATCTGTTCTAATCTGG+GGG + chr3_4:52422759-52422778 Msa0506220:intron 30.0%
!! ATGGTTCGTAATTTTAGTCA+CGG - chr3_4:52422929-52422948 None:intergenic 30.0%
GATTCAACACATTGCATTTA+TGG - chr3_4:52423014-52423033 None:intergenic 30.0%
AAATGCAATGTGTTGAATCA+TGG + chr3_4:52423015-52423034 Msa0506220:intron 30.0%
TTGTATATGTGCCTTCTATT+GGG + chr3_4:52423188-52423207 Msa0506220:intron 30.0%
! TTATTTCCTTCTTTTTGCAG+TGG + chr3_4:52423225-52423244 Msa0506220:intron 30.0%
! TATTTCCTTCTTTTTGCAGT+GGG + chr3_4:52423226-52423245 Msa0506220:intron 30.0%
!! AATTTTCTAGTGAGCTATCA+TGG + chr3_4:52423388-52423407 Msa0506220:intron 30.0%
ATATGTTGCTGTAAAAGTCT+AGG - chr3_4:52423535-52423554 None:intergenic 30.0%
GCTTATTTGAACTTATCTAG+TGG - chr3_4:52424096-52424115 None:intergenic 30.0%
AAATTATGGTCTGATTGGAT+TGG - chr3_4:52424118-52424137 None:intergenic 30.0%
TCTCAAATATCAAACTAAGG+TGG - chr3_4:52424155-52424174 None:intergenic 30.0%
TGCTTATATTTCATTCAGGA+GGG - chr3_4:52424226-52424245 None:intergenic 30.0%
TTGCTTATATTTCATTCAGG+AGG - chr3_4:52424227-52424246 None:intergenic 30.0%
AGACAAGAATGCAGATATAA+AGG - chr3_4:52425023-52425042 None:intergenic 30.0%
! ATTGAGTAGTATTTTACTGG+TGG + chr3_4:52425540-52425559 Msa0506220:intron 30.0%
!! TGACTTGCTGTATAAATTTC+AGG + chr3_4:52425601-52425620 Msa0506220:intron 30.0%
! GGTTTATCTTTTTGCGAATA+TGG + chr3_4:52425622-52425641 Msa0506220:intron 30.0%
TACAATTCAGATCTCAAAGT+TGG - chr3_4:52425674-52425693 None:intergenic 30.0%
!!! TTCTTTGTTTTTAGCCATCT+AGG + chr3_4:52425775-52425794 Msa0506220:intron 30.0%
!!! TCTTTGTTTTTAGCCATCTA+GGG + chr3_4:52425776-52425795 Msa0506220:intron 30.0%
!! TATTTGAACCGTTCTTGTTT+TGG + chr3_4:52425848-52425867 Msa0506220:CDS 30.0%
!!! ATTTGAACCGTTCTTGTTTT+GGG + chr3_4:52425849-52425868 Msa0506220:CDS 30.0%
!!! GTTTTTTGAATTAGGGGATC+GGG - chr3_4:52419447-52419466 None:intergenic 35.0%
!!! GGTTTTTTGAATTAGGGGAT+CGG - chr3_4:52419448-52419467 None:intergenic 35.0%
!!! GGGTTAGGGTTTTTTGAATT+AGG - chr3_4:52419455-52419474 None:intergenic 35.0%
!!! GGTTTTTTTGAGACGTGAAT+CGG - chr3_4:52419496-52419515 None:intergenic 35.0%
AAGATGTTCGAGGATTTGAA+GGG - chr3_4:52419574-52419593 None:intergenic 35.0%
AAATCTCTTCAAGATGTTCG+AGG - chr3_4:52419584-52419603 None:intergenic 35.0%
TTTCTATCTCGAATGCGATT+CGG + chr3_4:52419619-52419638 Msa0506220:CDS 35.0%
ATATTTGATTAATTCGCCCG+AGG + chr3_4:52419680-52419699 Msa0506220:CDS 35.0%
! TGAAGTGAAGAGGTTTTTGA+AGG + chr3_4:52419881-52419900 Msa0506220:CDS 35.0%
! GTTTCTTGATTTGATTGCGA+TGG + chr3_4:52419929-52419948 Msa0506220:CDS 35.0%
TAGAAGGTTGTTAGAAGGTT+TGG + chr3_4:52420010-52420029 Msa0506220:CDS 35.0%
AGAAGGTTGTTAGAAGGTTT+GGG + chr3_4:52420011-52420030 Msa0506220:CDS 35.0%
! GTGAATGATGATGTAGCAAT+GGG + chr3_4:52420044-52420063 Msa0506220:CDS 35.0%
AATCAGCAATTGGAAGAGAA+TGG + chr3_4:52420080-52420099 Msa0506220:CDS 35.0%
TGTTGGAGAGTTGAAAAGTT+TGG + chr3_4:52420395-52420414 Msa0506220:intron 35.0%
!! TTTTGCTGTGTAAGGTTTGA+TGG + chr3_4:52420438-52420457 Msa0506220:intron 35.0%
GTGTTTGTGAAATTGCTGAA+GGG + chr3_4:52420725-52420744 Msa0506220:CDS 35.0%
TGTTTGTGAAATTGCTGAAG+GGG + chr3_4:52420726-52420745 Msa0506220:CDS 35.0%
AAATCGTGGCAATGAACAAT+TGG + chr3_4:52420876-52420895 Msa0506220:CDS 35.0%
!! ACTTCTGGAATGAGAGATAA+AGG + chr3_4:52420913-52420932 Msa0506220:CDS 35.0%
! GAGTGTATTTGAAGTCCTAA+AGG + chr3_4:52421123-52421142 Msa0506220:intron 35.0%
GGTTTAAGTAACTGCATAAG+TGG + chr3_4:52421144-52421163 Msa0506220:intron 35.0%
TAGTGCATATATCGAGAACA+TGG - chr3_4:52421274-52421293 None:intergenic 35.0%
AAGGCAACACAAACAAAGTA+AGG - chr3_4:52421448-52421467 None:intergenic 35.0%
TGTAATGTATATACGGTGTG+TGG + chr3_4:52421754-52421773 Msa0506220:intron 35.0%
GGCTCGTATGAGTTATATAT+AGG + chr3_4:52421827-52421846 Msa0506220:intron 35.0%
GTCCCTTAAATCAAGTTCTA+TGG + chr3_4:52422408-52422427 Msa0506220:CDS 35.0%
GCTCCATAGAACTTGATTTA+AGG - chr3_4:52422414-52422433 None:intergenic 35.0%
! TTCTATGGAGCTAAAAGCAT+TGG + chr3_4:52422423-52422442 Msa0506220:CDS 35.0%
TGTAGCCAATTTGGATCTTA+CGG - chr3_4:52422488-52422507 None:intergenic 35.0%
TTGGCAAAATTGGCATCATT+AGG - chr3_4:52422604-52422623 None:intergenic 35.0%
! TAATGATGCCAATTTTGCCA+AGG + chr3_4:52422603-52422622 Msa0506220:CDS 35.0%
GACTACCATTACTACAGTTA+GGG - chr3_4:52422657-52422676 None:intergenic 35.0%
AAGTTATGCTCAAACATACG+AGG + chr3_4:52422723-52422742 Msa0506220:CDS 35.0%
TTTACAAGACAGCATCCTTT+AGG - chr3_4:52422822-52422841 None:intergenic 35.0%
! GCAGTATTTAAAACAGTGGT+GGG - chr3_4:52422904-52422923 None:intergenic 35.0%
! AGCAGTATTTAAAACAGTGG+TGG - chr3_4:52422905-52422924 None:intergenic 35.0%
TACGAACCATTACACGAAAT+TGG + chr3_4:52422939-52422958 Msa0506220:intron 35.0%
!! TTGTGTTTGGTGGTTTCTTT+TGG + chr3_4:52423138-52423157 Msa0506220:intron 35.0%
CTTGTATATGTGCCTTCTAT+TGG + chr3_4:52423187-52423206 Msa0506220:intron 35.0%
! CATTTCCTTTTCTTCCTTCT+TGG - chr3_4:52423287-52423306 None:intergenic 35.0%
CAAGAAGGAAGAAAAGGAAA+TGG + chr3_4:52423285-52423304 Msa0506220:CDS 35.0%
TTCTTATACAGGTTTGGAGA+AGG + chr3_4:52423494-52423513 Msa0506220:intron 35.0%
ACAAGTGGAGAAATATGATG+CGG + chr3_4:52423666-52423685 Msa0506220:intron 35.0%
CAAGAAAACAATACCTTCCT+AGG - chr3_4:52423727-52423746 None:intergenic 35.0%
! ATAAATAGTACACCGACTAG+CGG - chr3_4:52424746-52424765 None:intergenic 35.0%
CACAGTAACTGAACAAAACA+CGG - chr3_4:52424798-52424817 None:intergenic 35.0%
! TTTTGTTCAGTTACTGTGTC+AGG + chr3_4:52424800-52424819 Msa0506220:intron 35.0%
TTTGTTCAGTTACTGTGTCA+GGG + chr3_4:52424801-52424820 Msa0506220:intron 35.0%
TCCAACTAATGCATATAGTG+AGG + chr3_4:52424941-52424960 Msa0506220:intron 35.0%
ACCTCACTATATGCATTAGT+TGG - chr3_4:52424945-52424964 None:intergenic 35.0%
ATGCAGATATAAAGGAGAAG+TGG - chr3_4:52425015-52425034 None:intergenic 35.0%
ATATCTGCATTCTTGTCTCA+AGG + chr3_4:52425025-52425044 Msa0506220:intron 35.0%
TATCTGCATTCTTGTCTCAA+GGG + chr3_4:52425026-52425045 Msa0506220:intron 35.0%
!! ATCTGAAGTTTTATGGCTGT+TGG + chr3_4:52425124-52425143 Msa0506220:intron 35.0%
!!! GTATTGAGCTTTTAAGATGC+AGG - chr3_4:52425233-52425252 None:intergenic 35.0%
CTATAAAGCTCTACATGGAA+TGG - chr3_4:52425308-52425327 None:intergenic 35.0%
ACAAGCTATAAAGCTCTACA+TGG - chr3_4:52425313-52425332 None:intergenic 35.0%
AAACAGAAGACAGTTATGAC+TGG + chr3_4:52425346-52425365 Msa0506220:intron 35.0%
! TGTTGTGCATGAAATTTTCG+TGG + chr3_4:52425380-52425399 Msa0506220:intron 35.0%
! GAAATTTTCGTGGCAAGTTT+AGG + chr3_4:52425390-52425409 Msa0506220:intron 35.0%
TCAGCTACTAAAATGTATGC+AGG - chr3_4:52425434-52425453 None:intergenic 35.0%
! ACTCAATTTGTTCAGCAGTT+AGG - chr3_4:52425527-52425546 None:intergenic 35.0%
! AGTAGTATTTTACTGGTGGT+GGG + chr3_4:52425544-52425563 Msa0506220:intron 35.0%
! ATTCAGATCTCAAAGTTGGT+AGG - chr3_4:52425670-52425689 None:intergenic 35.0%
TTGATTAGCAATACCCTAGA+TGG - chr3_4:52425792-52425811 None:intergenic 35.0%
TGTCTCTTCTAACATGTGTT+GGG + chr3_4:52425889-52425908 Msa0506220:CDS 35.0%
CAAGATGTTCGAGGATTTGA+AGG - chr3_4:52419575-52419594 None:intergenic 40.0%
! TCCGTCTGGTGAGTATTTTT+CGG + chr3_4:52419704-52419723 Msa0506220:CDS 40.0%
GTTGAATACAAGGAGAGATG+CGG + chr3_4:52419854-52419873 Msa0506220:CDS 40.0%
TTTGATTGCGATGGTTTCGA+AGG + chr3_4:52419938-52419957 Msa0506220:CDS 40.0%
TTGATTGCGATGGTTTCGAA+GGG + chr3_4:52419939-52419958 Msa0506220:CDS 40.0%
TGTTTGTGAAAATGCTGCTG+AGG + chr3_4:52419983-52420002 Msa0506220:CDS 40.0%
GTTTGTGAAAATGCTGCTGA+GGG + chr3_4:52419984-52420003 Msa0506220:CDS 40.0%
TTTGTGAAAATGCTGCTGAG+GGG + chr3_4:52419985-52420004 Msa0506220:CDS 40.0%
GAAGGTTGTTAGAAGGTTTG+GGG + chr3_4:52420012-52420031 Msa0506220:CDS 40.0%
! GGTGAATGATGATGTAGCAA+TGG + chr3_4:52420043-52420062 Msa0506220:CDS 40.0%
GTAGCAATGGGTGAAAATCA+TGG + chr3_4:52420056-52420075 Msa0506220:CDS 40.0%
AATGGGAGAGTAGAAGGTTT+AGG + chr3_4:52420131-52420150 Msa0506220:CDS 40.0%
ATGGGAGAGTAGAAGGTTTA+GGG + chr3_4:52420132-52420151 Msa0506220:CDS 40.0%
! GATGATGGTGATGATGAGAA+TGG + chr3_4:52420170-52420189 Msa0506220:CDS 40.0%
! TGATGATGATGTGACAACGA+TGG + chr3_4:52420223-52420242 Msa0506220:CDS 40.0%
! GATGATGATGTGACAACGAT+GGG + chr3_4:52420224-52420243 Msa0506220:CDS 40.0%
ACAACGATGGGTGAAAATCA+TGG + chr3_4:52420236-52420255 Msa0506220:CDS 40.0%
GAAGAATTGGAAGACAGAGT+TGG + chr3_4:52420263-52420282 Msa0506220:CDS 40.0%
TACTTCTGTTGATGCGAATC+AGG + chr3_4:52420286-52420305 Msa0506220:CDS 40.0%
ATTTCACAAACACCTTCAGG+AGG - chr3_4:52420718-52420737 None:intergenic 40.0%
GCAATTTCACAAACACCTTC+AGG - chr3_4:52420721-52420740 None:intergenic 40.0%
GGTGTTTGTGAAATTGCTGA+AGG + chr3_4:52420724-52420743 Msa0506220:intron 40.0%
GTTTGTGAAATTGCTGAAGG+GGG + chr3_4:52420727-52420746 Msa0506220:CDS 40.0%
! AAGATTTGAGGAAGCGTGAT+GGG + chr3_4:52420752-52420771 Msa0506220:CDS 40.0%
! TGACGATGATGTAGCATTGA+TGG + chr3_4:52420849-52420868 Msa0506220:CDS 40.0%
!! GATGATGTAGCATTGATGGA+TGG + chr3_4:52420853-52420872 Msa0506220:CDS 40.0%
TACTTCGACACTCCTACAAT+CGG - chr3_4:52421862-52421881 None:intergenic 40.0%
TGCACTACAAAAAAGCCACA+GGG + chr3_4:52422291-52422310 Msa0506220:CDS 40.0%
! AGTTAAACTCTCTGGTGATG+AGG + chr3_4:52422315-52422334 Msa0506220:CDS 40.0%
! GTGCTGATGTGAAGAAACTT+CGG + chr3_4:52422383-52422402 Msa0506220:CDS 40.0%
TGCTGATGTGAAGAAACTTC+GGG + chr3_4:52422384-52422403 Msa0506220:CDS 40.0%
TGAAGCCGTAAGATCCAAAT+TGG + chr3_4:52422480-52422499 Msa0506220:CDS 40.0%
!! ATGTTCACTCTGCTTTTCAC+TGG - chr3_4:52422533-52422552 None:intergenic 40.0%
TTGGCATCATTAGGCTGATA+TGG - chr3_4:52422595-52422614 None:intergenic 40.0%
TCACTACTACAAGGAACAGA+AGG - chr3_4:52422631-52422650 None:intergenic 40.0%
CGACTACCATTACTACAGTT+AGG - chr3_4:52422658-52422677 None:intergenic 40.0%
GACGATCATTACTGTAGTTG+GGG - chr3_4:52422681-52422700 None:intergenic 40.0%
CGACGATCATTACTGTAGTT+GGG - chr3_4:52422682-52422701 None:intergenic 40.0%
! GGCAGCAGTATTTAAAACAG+TGG - chr3_4:52422908-52422927 None:intergenic 40.0%
TCAACGCCAATTTCGTGTAA+TGG - chr3_4:52422948-52422967 None:intergenic 40.0%
ATTACACGAAATTGGCGTTG+AGG + chr3_4:52422947-52422966 Msa0506220:intron 40.0%
GGTTAAGAGTCTCTTGTGTT+TGG + chr3_4:52423125-52423144 Msa0506220:intron 40.0%
TAAGAGTCTCTTGTGTTTGG+TGG + chr3_4:52423128-52423147 Msa0506220:intron 40.0%
!! GTGGTTTCTTTTGGTTGTTG+TGG + chr3_4:52423147-52423166 Msa0506220:intron 40.0%
ATCATCCCACTGCAAAAAGA+AGG - chr3_4:52423234-52423253 None:intergenic 40.0%
! GAAAAGGAAATGGACTTCCT+TGG + chr3_4:52423295-52423314 Msa0506220:CDS 40.0%
CTTCCTAGGATATATGCACA+GGG - chr3_4:52423713-52423732 None:intergenic 40.0%
! TTTTAAACGAAGAGGGGTAG+AGG + chr3_4:52423843-52423862 Msa0506220:intron 40.0%
CTGAACTTGACGATGTTTCA+AGG + chr3_4:52424384-52424403 Msa0506220:intron 40.0%
! CCGAAACTTTAGGAAGAATG+GGG - chr3_4:52424723-52424742 None:intergenic 40.0%
CCCCATTCTTCCTAAAGTTT+CGG + chr3_4:52424720-52424739 Msa0506220:intron 40.0%
! GCCGAAACTTTAGGAAGAAT+GGG - chr3_4:52424724-52424743 None:intergenic 40.0%
AATGCATATAGTGAGGTGTG+AGG + chr3_4:52424948-52424967 Msa0506220:intron 40.0%
! TGGGTTCTAACATGGACTTT+GGG - chr3_4:52424986-52425005 None:intergenic 40.0%
AAAGGAGAAGTGGTTTGAGT+GGG - chr3_4:52425005-52425024 None:intergenic 40.0%
TAAAGGAGAAGTGGTTTGAG+TGG - chr3_4:52425006-52425025 None:intergenic 40.0%
TAAGGTTAGACTCTAAGTGC+AGG + chr3_4:52425074-52425093 Msa0506220:intron 40.0%
CTCTACATGGAATGGTTAAG+TGG - chr3_4:52425300-52425319 None:intergenic 40.0%
! AAGACAGTTATGACTGGTTG+AGG + chr3_4:52425352-52425371 Msa0506220:intron 40.0%
CAGTTAGGAACTACAAAACC+AGG - chr3_4:52425512-52425531 None:intergenic 40.0%
! GAGTAGTATTTTACTGGTGG+TGG + chr3_4:52425543-52425562 Msa0506220:intron 40.0%
!! GTAGTATTTTACTGGTGGTG+GGG + chr3_4:52425545-52425564 Msa0506220:intron 40.0%
! GCAAGTCAGTATACCTTTTC+TGG - chr3_4:52425589-52425608 None:intergenic 40.0%
CGAATATGGGCAACTTGAAA+GGG + chr3_4:52425636-52425655 Msa0506220:CDS 40.0%
ACATGTTAGAAGAGACAGTC+GGG - chr3_4:52425886-52425905 None:intergenic 40.0%
CACATGTTAGAAGAGACAGT+CGG - chr3_4:52425887-52425906 None:intergenic 40.0%
CTGTCTCTTCTAACATGTGT+TGG + chr3_4:52425888-52425907 Msa0506220:CDS 40.0%
TTGAATTAGGGGATCGGGAA+CGG - chr3_4:52419442-52419461 None:intergenic 45.0%
GAGGATTTGAAGGGAGACTT+CGG - chr3_4:52419565-52419584 None:intergenic 45.0%
AGATAGAAACTCCTTCGTCG+CGG - chr3_4:52419608-52419627 None:intergenic 45.0%
GCCGAAAAATACTCACCAGA+CGG - chr3_4:52419708-52419727 None:intergenic 45.0%
!! GTCTGGTGAGTATTTTTCGG+CGG + chr3_4:52419707-52419726 Msa0506220:CDS 45.0%
!! AGTATTTTTCGGCGGTGAAG+AGG + chr3_4:52419715-52419734 Msa0506220:CDS 45.0%
! AAGAGATTGAAGGTGCGCTT+TGG + chr3_4:52419802-52419821 Msa0506220:CDS 45.0%
! AGAGATTGAAGGTGCGCTTT+GGG + chr3_4:52419803-52419822 Msa0506220:CDS 45.0%
ATGCGGTTGTTGAAGTGAAG+AGG + chr3_4:52419871-52419890 Msa0506220:CDS 45.0%
!! AGAGGTTTTTGAAGGAAGCG+TGG + chr3_4:52419889-52419908 Msa0506220:CDS 45.0%
!! GAGGTTTTTGAAGGAAGCGT+GGG + chr3_4:52419890-52419909 Msa0506220:CDS 45.0%
!! AGGTTTTTGAAGGAAGCGTG+GGG + chr3_4:52419891-52419910 Msa0506220:CDS 45.0%
TGATTGCGATGGTTTCGAAG+GGG + chr3_4:52419940-52419959 Msa0506220:CDS 45.0%
! GCATTTTCACAAACACCTCC+CGG - chr3_4:52419978-52419997 None:intergenic 45.0%
GGGAGTAGAAGGTTGTTAGA+AGG + chr3_4:52420005-52420024 Msa0506220:CDS 45.0%
GCAATTGGAAGAGAATGGCT+CGG + chr3_4:52420085-52420104 Msa0506220:CDS 45.0%
CAATTGGAAGAGAATGGCTC+GGG + chr3_4:52420086-52420105 Msa0506220:CDS 45.0%
TGTTGATGCGAATCAGGAAG+TGG + chr3_4:52420292-52420311 Msa0506220:CDS 45.0%
CGAGCTGGTACTTCTAGTAT+GGG + chr3_4:52420320-52420339 Msa0506220:CDS 45.0%
GGTTTGAGTAGCTGCATAAG+TGG + chr3_4:52420509-52420528 Msa0506220:intron 45.0%
TATAAGGGTTTGCCTCCTGA+AGG + chr3_4:52420703-52420722 Msa0506220:intron 45.0%
! GAAGATTTGAGGAAGCGTGA+TGG + chr3_4:52420751-52420770 Msa0506220:CDS 45.0%
TGATGGGAGGTTAGAAGGTT+TGG + chr3_4:52420768-52420787 Msa0506220:CDS 45.0%
GATGGGAGGTTAGAAGGTTT+GGG + chr3_4:52420769-52420788 Msa0506220:CDS 45.0%
GAGGTTAGAAGGTTTGGGAA+AGG + chr3_4:52420774-52420793 Msa0506220:CDS 45.0%
! GCATTGATGGATGGAAATCG+TGG + chr3_4:52420862-52420881 Msa0506220:CDS 45.0%
ATAACTCATACGAGCCGTGT+CGG - chr3_4:52421823-52421842 None:intergenic 45.0%
ATGTGTCGTACGAGTGTCAT+AGG + chr3_4:52421917-52421936 Msa0506220:intron 45.0%
! TACGAGTGTCATAGGAGTGT+CGG + chr3_4:52421925-52421944 Msa0506220:intron 45.0%
TCTTATTCCCTACCCATTGC+AGG + chr3_4:52422039-52422058 Msa0506220:intron 45.0%
CAATAGTCCTGCAATGGGTA+GGG - chr3_4:52422049-52422068 None:intergenic 45.0%
TGTGGCAATAGTCCTGCAAT+GGG - chr3_4:52422054-52422073 None:intergenic 45.0%
ATGTGGCAATAGTCCTGCAA+TGG - chr3_4:52422055-52422074 None:intergenic 45.0%
CTGCACTACAAAAAAGCCAC+AGG + chr3_4:52422290-52422309 Msa0506220:CDS 45.0%
GCACTACAAAAAAGCCACAG+GGG + chr3_4:52422292-52422311 Msa0506220:CDS 45.0%
TCAGATGTGTGCAATGCATC+AGG - chr3_4:52422463-52422482 None:intergenic 45.0%
AGAAGGCTCCTTGGCAAAAT+TGG - chr3_4:52422614-52422633 None:intergenic 45.0%
TTAGGGCGATCACTACTACA+AGG - chr3_4:52422640-52422659 None:intergenic 45.0%
GATCGCCCTAACTGTAGTAA+TGG + chr3_4:52422649-52422668 Msa0506220:CDS 45.0%
GCGACGATCATTACTGTAGT+TGG - chr3_4:52422683-52422702 None:intergenic 45.0%
TATCTGTTCTAATCTGGGGG+TGG + chr3_4:52422762-52422781 Msa0506220:intron 45.0%
TGTTCTCACTAAGGGCCTAA+AGG + chr3_4:52422804-52422823 Msa0506220:intron 45.0%
!! TCATGATGCTTGCTGTCTCT+TGG + chr3_4:52422853-52422872 Msa0506220:intron 45.0%
TGAACATCTGCAGAATCCAC+AGG - chr3_4:52423072-52423091 None:intergenic 45.0%
ATGTGCCTTCTATTGGGCAT+TGG + chr3_4:52423194-52423213 Msa0506220:intron 45.0%
ATGTGCCAATGCCCAATAGA+AGG - chr3_4:52423202-52423221 None:intergenic 45.0%
! CTTCTTGGCTGACTTTGTTG+CGG - chr3_4:52423272-52423291 None:intergenic 45.0%
GTCAGCCAAGAAGGAAGAAA+AGG + chr3_4:52423279-52423298 Msa0506220:CDS 45.0%
ACAGGTTTGGAGAAGGAAAC+TGG + chr3_4:52423501-52423520 Msa0506220:intron 45.0%
! AGGTTGATCTGAAGGACAAG+TGG + chr3_4:52423651-52423670 Msa0506220:intron 45.0%
CATCCCTGTGCATATATCCT+AGG + chr3_4:52423707-52423726 Msa0506220:intron 45.0%
CCTTCCTAGGATATATGCAC+AGG - chr3_4:52423714-52423733 None:intergenic 45.0%
CCTGTGCATATATCCTAGGA+AGG + chr3_4:52423711-52423730 Msa0506220:intron 45.0%
TAGGAAGAATGGGGTAGCTT+TGG - chr3_4:52424714-52424733 None:intergenic 45.0%
! GGCCGAAACTTTAGGAAGAA+TGG - chr3_4:52424725-52424744 None:intergenic 45.0%
! GTGGGTTCTAACATGGACTT+TGG - chr3_4:52424987-52425006 None:intergenic 45.0%
! GGTTTGAGTGGGTTCTAACA+TGG - chr3_4:52424994-52425013 None:intergenic 45.0%
ATTCTTGTCTCAAGGGCTCA+GGG + chr3_4:52425033-52425052 Msa0506220:intron 45.0%
CTCAGGGCTCATCTTAACTA+AGG + chr3_4:52425056-52425075 Msa0506220:intron 45.0%
GGAATGGTTAAGTGGCAAGT+AGG - chr3_4:52425292-52425311 None:intergenic 45.0%
GTGCTGAATCTTGCCAGAAA+AGG + chr3_4:52425573-52425592 Msa0506220:intron 45.0%
GCGAATATGGGCAACTTGAA+AGG + chr3_4:52425635-52425654 Msa0506220:CDS 45.0%
CTGCGTTCCCAAAACAAGAA+CGG - chr3_4:52425859-52425878 None:intergenic 45.0%
!!! TCTTGTTTTGGGAACGCAGT+TGG + chr3_4:52425860-52425879 Msa0506220:CDS 45.0%
TCTAACATGTGTTGGGCGAT+TGG + chr3_4:52425896-52425915 Msa0506220:CDS 45.0%
!! ATGATTTAAATTATAATTAT+CGG + chr3_4:52420463-52420482 Msa0506220:intron 5.0%
!!! TATAAAATTTTAATCTTAAA+TGG + chr3_4:52421409-52421428 Msa0506220:intron 5.0%
!!! ATAAAATTTTAATCTTAAAT+GGG + chr3_4:52421410-52421429 Msa0506220:intron 5.0%
GGAGAGTGGAAGTAGGGTTA+GGG - chr3_4:52419469-52419488 None:intergenic 50.0%
CTAACCCTACTTCCACTCTC+CGG + chr3_4:52419468-52419487 Msa0506220:CDS 50.0%
GGAGACTTCGGAGATTGAAG+CGG - chr3_4:52419553-52419572 None:intergenic 50.0%
GAAGAGATTTACCGCGACGA+AGG + chr3_4:52419594-52419613 Msa0506220:CDS 50.0%
! GAGTGCTTACTGTGCTGTTG+CGG + chr3_4:52419641-52419660 Msa0506220:CDS 50.0%
TGCTGTTGCGGTGGAATGTA+CGG + chr3_4:52419653-52419672 Msa0506220:CDS 50.0%
ATACTCACCAGACGGATCCT+CGG - chr3_4:52419700-52419719 None:intergenic 50.0%
TTTCGGCGGTGAAGAGGATT+TGG + chr3_4:52419721-52419740 Msa0506220:CDS 50.0%
TGAAGAGGATTTGGAGGGGA+AGG + chr3_4:52419730-52419749 Msa0506220:CDS 50.0%
GAAGAGGATTTGGAGGGGAA+GGG + chr3_4:52419731-52419750 Msa0506220:CDS 50.0%
!! AAGGTGCGCTTTGGGATGTT+AGG + chr3_4:52419811-52419830 Msa0506220:CDS 50.0%
!! AGGTGCGCTTTGGGATGTTA+GGG + chr3_4:52419812-52419831 Msa0506220:CDS 50.0%
!! GCTTTGGGATGTTAGGGTTG+CGG + chr3_4:52419818-52419837 Msa0506220:CDS 50.0%
!! GGTTGGTGGGGTTGAATACA+AGG + chr3_4:52419844-52419863 Msa0506220:CDS 50.0%
!! GGTTTTTGAAGGAAGCGTGG+GGG + chr3_4:52419892-52419911 Msa0506220:CDS 50.0%
! GAAGGGGAATGGTTTGTGTC+CGG + chr3_4:52419956-52419975 Msa0506220:CDS 50.0%
! AAGGGGAATGGTTTGTGTCC+GGG + chr3_4:52419957-52419976 Msa0506220:CDS 50.0%
AGAAGGTTTGGGGAAAGAGC+AGG + chr3_4:52420022-52420041 Msa0506220:CDS 50.0%
GCGAGCTGGTACTTCTAGTA+TGG + chr3_4:52420319-52420338 Msa0506220:CDS 50.0%
GCTGGTACTTCTAGTATGGG+AGG + chr3_4:52420323-52420342 Msa0506220:CDS 50.0%
CTGAAGGGGGTGAAGATTTG+AGG + chr3_4:52420740-52420759 Msa0506220:CDS 50.0%
! ATTTGAGGAAGCGTGATGGG+AGG + chr3_4:52420755-52420774 Msa0506220:CDS 50.0%
! AAGCGTGATGGGAGGTTAGA+AGG + chr3_4:52420763-52420782 Msa0506220:CDS 50.0%
GAAGTGAGAGTTCGCACTTC+TGG + chr3_4:52420898-52420917 Msa0506220:CDS 50.0%
ATGAAGCATGGACTCCGACA+CGG + chr3_4:52421492-52421511 Msa0506220:intron 50.0%
TTTGTCTGCGTTGTCCGACA+CGG + chr3_4:52421806-52421825 Msa0506220:intron 50.0%
TCGTACGACACATGTCGAAC+CGG - chr3_4:52421910-52421929 None:intergenic 50.0%
TATGAAGCACGGACACCTCT+AGG - chr3_4:52421987-52422006 None:intergenic 50.0%
GCAATAGTCCTGCAATGGGT+AGG - chr3_4:52422050-52422069 None:intergenic 50.0%
CAGAGAGTTTAACTCCCCTG+TGG - chr3_4:52422309-52422328 None:intergenic 50.0%
CACAGGGGAGTTAAACTCTC+TGG + chr3_4:52422307-52422326 Msa0506220:CDS 50.0%
GTGTGCAATGCATCAGGAAG+AGG - chr3_4:52422457-52422476 None:intergenic 50.0%
!! TCACTCTGCTTTTCACTGGC+TGG - chr3_4:52422529-52422548 None:intergenic 50.0%
ACAAGGAACAGAAGGCTCCT+TGG - chr3_4:52422623-52422642 None:intergenic 50.0%
! TTGCCCGTCGCATTAAGTTG+GGG - chr3_4:52422705-52422724 None:intergenic 50.0%
CTTGCCCGTCGCATTAAGTT+GGG - chr3_4:52422706-52422725 None:intergenic 50.0%
ACTTGCCCGTCGCATTAAGT+TGG - chr3_4:52422707-52422726 None:intergenic 50.0%
!! TGATGCTTGCTGTCTCTTGG+AGG + chr3_4:52422856-52422875 Msa0506220:intron 50.0%
TGACTGACTGCACTTGTGTG+CGG + chr3_4:52422976-52422995 Msa0506220:intron 50.0%
AATCCACAGGCCACTACATC+TGG - chr3_4:52423059-52423078 None:intergenic 50.0%
CGCAACAAAGTCAGCCAAGA+AGG + chr3_4:52423270-52423289 Msa0506220:CDS 50.0%
GGTTTGGAGAAGGAAACTGG+AGG + chr3_4:52423504-52423523 Msa0506220:intron 50.0%
CTAAAGTTTCGGCCGCTAGT+CGG + chr3_4:52424731-52424750 Msa0506220:intron 50.0%
!! ATGGACTTTGGGTTGCCAGT+TGG - chr3_4:52424975-52424994 None:intergenic 50.0%
CATTCTTGTCTCAAGGGCTC+AGG + chr3_4:52425032-52425051 Msa0506220:intron 50.0%
!!! GTATTTTACTGGTGGTGGGG+AGG + chr3_4:52425548-52425567 Msa0506220:intron 50.0%
! GATCGGGAACGGTGGTGTTA+CGG - chr3_4:52419431-52419450 None:intergenic 55.0%
AATTAGGGGATCGGGAACGG+TGG - chr3_4:52419439-52419458 None:intergenic 55.0%
CGGAGAGTGGAAGTAGGGTT+AGG - chr3_4:52419470-52419489 None:intergenic 55.0%
! TTTGAGACGTGAATCGGCGC+CGG - chr3_4:52419490-52419509 None:intergenic 55.0%
TTGAAGAACGCGGAGGAGGA+GGG - chr3_4:52419517-52419536 None:intergenic 55.0%
TTTGAAGAACGCGGAGGAGG+AGG - chr3_4:52419518-52419537 None:intergenic 55.0%
GGACGTGGGTTTGAAGAACG+CGG - chr3_4:52419527-52419546 None:intergenic 55.0%
GATTGAAGCGGTGAGGACGT+GGG - chr3_4:52419541-52419560 None:intergenic 55.0%
AGATTGAAGCGGTGAGGACG+TGG - chr3_4:52419542-52419561 None:intergenic 55.0%
CTTCGGAGATTGAAGCGGTG+AGG - chr3_4:52419548-52419567 None:intergenic 55.0%
! TGCTTACTGTGCTGTTGCGG+TGG + chr3_4:52419644-52419663 Msa0506220:CDS 55.0%
TACTCACCAGACGGATCCTC+GGG - chr3_4:52419699-52419718 None:intergenic 55.0%
GGCGGTGAAGAGGATTTGGA+GGG + chr3_4:52419725-52419744 Msa0506220:CDS 55.0%
GCGGTGAAGAGGATTTGGAG+GGG + chr3_4:52419726-52419745 Msa0506220:CDS 55.0%
TGTCGGAGGAGATGATGCAG+TGG + chr3_4:52419775-52419794 Msa0506220:CDS 55.0%
GTCGGAGGAGATGATGCAGT+GGG + chr3_4:52419776-52419795 Msa0506220:CDS 55.0%
TCGGAGGAGATGATGCAGTG+GGG + chr3_4:52419777-52419796 Msa0506220:CDS 55.0%
CAGTGGGGGGAAGAGATTGA+AGG + chr3_4:52419792-52419811 Msa0506220:CDS 55.0%
TGTTAGGGTTGCGGAGAGGT+TGG + chr3_4:52419827-52419846 Msa0506220:CDS 55.0%
! AAGGAAGCGTGGGGGAGTAT+GGG + chr3_4:52419900-52419919 Msa0506220:CDS 55.0%
GCGATGGTTTCGAAGGGGAA+TGG + chr3_4:52419945-52419964 Msa0506220:CDS 55.0%
ATGCTGCTGAGGGGAGTAGA+AGG + chr3_4:52419994-52420013 Msa0506220:CDS 55.0%
! TTGGAAGAGAATGGCTCGGG+TGG + chr3_4:52420089-52420108 Msa0506220:CDS 55.0%
! GAATGTCGAGGGGGCGTAAT+GGG + chr3_4:52420114-52420133 Msa0506220:CDS 55.0%
! GGGCGTAATGGGAGAGTAGA+AGG + chr3_4:52420125-52420144 Msa0506220:CDS 55.0%
CACCTGACACGACACTGACA+CGG + chr3_4:52421516-52421535 Msa0506220:intron 55.0%
!! AGGTGTCGGACACCGATTGT+AGG + chr3_4:52421847-52421866 Msa0506220:intron 55.0%
! TCTCTGGTGATGAGGAAGCG+AGG + chr3_4:52422323-52422342 Msa0506220:CDS 55.0%
GTCGCCCCAACTTAATGCGA+CGG + chr3_4:52422698-52422717 Msa0506220:CDS 55.0%
TCGCCCCAACTTAATGCGAC+GGG + chr3_4:52422699-52422718 Msa0506220:CDS 55.0%
TAGGCCACCACCAGATGTAG+TGG + chr3_4:52423046-52423065 Msa0506220:intron 55.0%
CGACTAGCGGCCGAAACTTT+AGG - chr3_4:52424733-52424752 None:intergenic 55.0%
AGTGAGGTGTGAGGTCCAAC+TGG + chr3_4:52424957-52424976 Msa0506220:intron 55.0%
!! GAACGGTGGTGTTACGGAGG+AGG - chr3_4:52419425-52419444 None:intergenic 60.0%
GGGTTTGAAGAACGCGGAGG+AGG - chr3_4:52419521-52419540 None:intergenic 60.0%
CGTGGGTTTGAAGAACGCGG+AGG - chr3_4:52419524-52419543 None:intergenic 60.0%
AATTCGCCCGAGGATCCGTC+TGG + chr3_4:52419690-52419709 Msa0506220:CDS 60.0%
CGGCGGTGAAGAGGATTTGG+AGG + chr3_4:52419724-52419743 Msa0506220:CDS 60.0%
GGATTTGGAGGGGAAGGGAG+AGG + chr3_4:52419736-52419755 Msa0506220:CDS 60.0%
TTTGGAGGGGAAGGGAGAGG+CGG + chr3_4:52419739-52419758 Msa0506220:CDS 60.0%
CGGAGGAGATGATGCAGTGG+GGG + chr3_4:52419778-52419797 Msa0506220:CDS 60.0%
GGAGGAGATGATGCAGTGGG+GGG + chr3_4:52419779-52419798 Msa0506220:CDS 60.0%
GGGATGTTAGGGTTGCGGAG+AGG + chr3_4:52419823-52419842 Msa0506220:CDS 60.0%
TAGGGTTGCGGAGAGGTTGG+TGG + chr3_4:52419830-52419849 Msa0506220:CDS 60.0%
! AGGGTTGCGGAGAGGTTGGT+GGG + chr3_4:52419831-52419850 Msa0506220:CDS 60.0%
! GAAGGAAGCGTGGGGGAGTA+TGG + chr3_4:52419899-52419918 Msa0506220:CDS 60.0%
! AGGAAGCGTGGGGGAGTATG+GGG + chr3_4:52419901-52419920 Msa0506220:CDS 60.0%
! GGGAATGGTTTGTGTCCGGG+AGG + chr3_4:52419960-52419979 Msa0506220:CDS 60.0%
! GAAGAGAATGGCTCGGGTGG+TGG + chr3_4:52420092-52420111 Msa0506220:CDS 60.0%
!! CTCGGGTGGTGGAATGTCGA+GGG + chr3_4:52420103-52420122 Msa0506220:CDS 60.0%
!! TCGGGTGGTGGAATGTCGAG+GGG + chr3_4:52420104-52420123 Msa0506220:CDS 60.0%
! GGAATGTCGAGGGGGCGTAA+TGG + chr3_4:52420113-52420132 Msa0506220:CDS 60.0%
CAGGAAGTGGAACAGCGAGC+TGG + chr3_4:52420305-52420324 Msa0506220:CDS 60.0%
GTCGTGTCAGGTGTCCGTGT+CGG - chr3_4:52421509-52421528 None:intergenic 60.0%
GTCCGTGTCAGTGTCGTGTC+AGG - chr3_4:52421521-52421540 None:intergenic 60.0%
TGTCGGACACCGACACGTGT+CGG + chr3_4:52421942-52421961 Msa0506220:intron 60.0%
CAGGCCACTACATCTGGTGG+TGG - chr3_4:52423053-52423072 None:intergenic 60.0%
CCACAGGCCACTACATCTGG+TGG - chr3_4:52423056-52423075 None:intergenic 60.0%
CCACCAGATGTAGTGGCCTG+TGG + chr3_4:52423053-52423072 Msa0506220:intron 60.0%
TCTCAAGGGCTCAGGGCTCA+GGG + chr3_4:52425040-52425059 Msa0506220:intron 60.0%
!! CGGGAACGGTGGTGTTACGG+AGG - chr3_4:52419428-52419447 None:intergenic 65.0%
! GGCGCCGGAGAGTGGAAGTA+GGG - chr3_4:52419475-52419494 None:intergenic 65.0%
TTGGAGGGGAAGGGAGAGGC+GGG + chr3_4:52419740-52419759 Msa0506220:CDS 65.0%
!! GGGTTGCGGAGAGGTTGGTG+GGG + chr3_4:52419832-52419851 Msa0506220:CDS 65.0%
! GGAAGCGTGGGGGAGTATGG+GGG + chr3_4:52419902-52419921 Msa0506220:CDS 65.0%
!! GCTCGGGTGGTGGAATGTCG+AGG + chr3_4:52420102-52420121 Msa0506220:CDS 65.0%
!! CGGGTGGTGGAATGTCGAGG+GGG + chr3_4:52420105-52420124 Msa0506220:CDS 65.0%
!! CTCTAGGACTACGCGTGCCG+CGG - chr3_4:52421971-52421990 None:intergenic 65.0%
GTCTCAAGGGCTCAGGGCTC+AGG + chr3_4:52425039-52425058 Msa0506220:intron 65.0%
! CGGCGCCGGAGAGTGGAAGT+AGG - chr3_4:52419476-52419495 None:intergenic 70.0%
! CGTGAATCGGCGCCGGAGAG+TGG - chr3_4:52419483-52419502 None:intergenic 70.0%
TGGAGGGGAAGGGAGAGGCG+GGG + chr3_4:52419741-52419760 Msa0506220:CDS 70.0%
GAAGGGAGAGGCGGGGGAGT+GGG + chr3_4:52419748-52419767 Msa0506220:CDS 70.0%
CCGCGGTGTCCGACACGTGT+CGG - chr3_4:52421954-52421973 None:intergenic 70.0%
CCGACACGTGTCGGACACCG+CGG + chr3_4:52421951-52421970 Msa0506220:intron 70.0%
CGCGGCACGCGTAGTCCTAG+AGG + chr3_4:52421969-52421988 Msa0506220:intron 70.0%
GGAGGGGAAGGGAGAGGCGG+GGG + chr3_4:52419742-52419761 Msa0506220:CDS 75.0%
GGAAGGGAGAGGCGGGGGAG+TGG + chr3_4:52419747-52419766 Msa0506220:CDS 75.0%
!! GCGGGGGAGTGGGCTGGTGT+CGG + chr3_4:52419758-52419777 Msa0506220:CDS 75.0%
!! GGGGAGTGGGCTGGTGTCGG+AGG + chr3_4:52419761-52419780 Msa0506220:CDS 75.0%
! GGAGAGGCGGGGGAGTGGGC+TGG + chr3_4:52419752-52419771 Msa0506220:CDS 80.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 52419330 52425925 52419330 ID=Msa0506220;Name=Msa0506220
chr3_4 mRNA 52419330 52425925 52419330 ID=Msa0506220-mRNA-1;Parent=Msa0506220;Name=Msa0506220-mRNA-1;_AED=0.16;_eAED=0.16;_QI=57|0.66|0.71|1|1|1|7|0|680
chr3_4 exon 52419330 52420344 52419330 ID=Msa0506220-mRNA-1:exon:11419;Parent=Msa0506220-mRNA-1
chr3_4 exon 52420725 52420934 52420725 ID=Msa0506220-mRNA-1:exon:11420;Parent=Msa0506220-mRNA-1
chr3_4 exon 52422251 52422744 52422251 ID=Msa0506220-mRNA-1:exon:11421;Parent=Msa0506220-mRNA-1
chr3_4 exon 52423245 52423348 52423245 ID=Msa0506220-mRNA-1:exon:11422;Parent=Msa0506220-mRNA-1
chr3_4 exon 52423505 52423571 52423505 ID=Msa0506220-mRNA-1:exon:11423;Parent=Msa0506220-mRNA-1
chr3_4 exon 52425623 52425703 52425623 ID=Msa0506220-mRNA-1:exon:11424;Parent=Msa0506220-mRNA-1
chr3_4 exon 52425797 52425925 52425797 ID=Msa0506220-mRNA-1:exon:11425;Parent=Msa0506220-mRNA-1
chr3_4 five_prime_UTR 52419330 52419386 52419330 ID=Msa0506220-mRNA-1:five_prime_utr;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52419387 52420344 52419387 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52420725 52420934 52420725 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52422251 52422744 52422251 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52423245 52423348 52423245 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52423505 52423571 52423505 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52425623 52425703 52425623 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
chr3_4 CDS 52425797 52425925 52425797 ID=Msa0506220-mRNA-1:cds;Parent=Msa0506220-mRNA-1
Gene Sequence

>Msa0506220

ATGAACGAAAACATTACAAACTGGATAATGGAATTCCTCCTCCGTAACACCACCGTTCCCGATCCCCTAATTCAAAAAACCCTAACCCTACTTCCACTCTCCGGCGCCGATTCACGTCTCAAAAAAACCCTCCTCCTCCGCGTTCTTCAAACCCACGTCCTCACCGCTTCAATCTCCGAAGTCTCCCTTCAAATCCTCGAACATCTTGAAGAGATTTACCGCGACGAAGGAGTTTCTATCTCGAATGCGATTCGGAGTGCTTACTGTGCTGTTGCGGTGGAATGTACGGTGAAATATTTGATTAATTCGCCCGAGGATCCGTCTGGTGAGTATTTTTCGGCGGTGAAGAGGATTTGGAGGGGAAGGGAGAGGCGGGGGAGTGGGCTGGTGTCGGAGGAGATGATGCAGTGGGGGGAAGAGATTGAAGGTGCGCTTTGGGATGTTAGGGTTGCGGAGAGGTTGGTGGGGTTGAATACAAGGAGAGATGCGGTTGTTGAAGTGAAGAGGTTTTTGAAGGAAGCGTGGGGGAGTATGGGGGATTCGTTTCTTGATTTGATTGCGATGGTTTCGAAGGGGAATGGTTTGTGTCCGGGAGGTGTTTGTGAAAATGCTGCTGAGGGGAGTAGAAGGTTGTTAGAAGGTTTGGGGAAAGAGCAGGTGAATGATGATGTAGCAATGGGTGAAAATCATGGTAATCAGCAATTGGAAGAGAATGGCTCGGGTGGTGGAATGTCGAGGGGGCGTAATGGGAGAGTAGAAGGTTTAGGGAAAGAGAAAATGAATGATGATGGTGATGATGAGAATGGTAATGTGAATGATATTGTTGATGATAGTGATGATGATGATGTGACAACGATGGGTGAAAATCATGGCAATGAAGAATTGGAAGACAGAGTTGGTACTTCTGTTGATGCGAATCAGGAAGTGGAACAGCGAGCTGGTACTTCTAGTATGGGAGGTGTTTGTGAAATTGCTGAAGGGGGTGAAGATTTGAGGAAGCGTGATGGGAGGTTAGAAGGTTTGGGAAAGGAGAAAATGAATGATGATGGTGACGATGTGAATGATAATGATAATGTTGATGGTGACGATGATGTAGCATTGATGGATGGAAATCGTGGCAATGAACAATTGGAAGTGAGAGTTCGCACTTCTGGAATGAGAGATAAAGAAATTCGGAAAGACAATGGTCAGCTCAAACGCAAGCACTCTGCACTACAAAAAAGCCACAGGGGAGTTAAACTCTCTGGTGATGAGGAAGCGAGGCCGATAAATTTTTCGACTAAATATGAAAATCTGCGTAGTGCTGATGTGAAGAAACTTCGGGAGTCCCTTAAATCAAGTTCTATGGAGCTAAAAGCATTGGTCAAAGATCCTCTTCCTGATGCATTGCACACATCTGAAGCCGTAAGATCCAAATTGGCTACAAAAGATATAAATCGCAGGCCAGCCAGTGAAAAGCAGAGTGAACATGTAGATGTACAAGATTCAGATGCATGCAAGACTATTGTACCATATCAGCCTAATGATGCCAATTTTGCCAAGGAGCCTTCTGTTCCTTGTAGTAGTGATCGCCCTAACTGTAGTAATGGTAGTCGCCCCAACTACAGTAATGATCGTCGCCCCAACTTAATGCGACGGGCAAGTTATGCTCAAACATACGAGTGGGATGATTCAATAGAGAACTTACCGCAACAAAGTCAGCCAAGAAGGAAGAAAAGGAAATGGACTTCCTTGGAAGAAGAGACACTAAGGGCTGGTGTAAGAATGTTTGGAGAAGGAAACTGGAGGACAATCCTAGACTTTTACAGCAACATATTTGAATATAGAAATGGAGTTTATCTTTTTGCGAATATGGGCAACTTGAAAGGGAAAAAGATCCTACCAACTTTGAGATCTGAATTGTACTACGAAACAGGTATTGCTAATCAACAGAATCAATCTGAAAAATATATGTGCAACTTTGTATATTTGAACCGTTCTTGTTTTGGGAACGCAGTTGGCCCGACTGTCTCTTCTAACATGTGTTGGGCGATTGGAACTTAG

Protein sequence

>Msa0506220

MNENITNWIMEFLLRNTTVPDPLIQKTLTLLPLSGADSRLKKTLLLRVLQTHVLTASISEVSLQILEHLEEIYRDEGVSISNAIRSAYCAVAVECTVKYLINSPEDPSGEYFSAVKRIWRGRERRGSGLVSEEMMQWGEEIEGALWDVRVAERLVGLNTRRDAVVEVKRFLKEAWGSMGDSFLDLIAMVSKGNGLCPGGVCENAAEGSRRLLEGLGKEQVNDDVAMGENHGNQQLEENGSGGGMSRGRNGRVEGLGKEKMNDDGDDENGNVNDIVDDSDDDDVTTMGENHGNEELEDRVGTSVDANQEVEQRAGTSSMGGVCEIAEGGEDLRKRDGRLEGLGKEKMNDDGDDVNDNDNVDGDDDVALMDGNRGNEQLEVRVRTSGMRDKEIRKDNGQLKRKHSALQKSHRGVKLSGDEEARPINFSTKYENLRSADVKKLRESLKSSSMELKALVKDPLPDALHTSEAVRSKLATKDINRRPASEKQSEHVDVQDSDACKTIVPYQPNDANFAKEPSVPCSSDRPNCSNGSRPNYSNDRRPNLMRRASYAQTYEWDDSIENLPQQSQPRRKKRKWTSLEEETLRAGVRMFGEGNWRTILDFYSNIFEYRNGVYLFANMGNLKGKKILPTLRSELYYETGIANQQNQSEKYMCNFVYLNRSCFGNAVGPTVSSNMCWAIGT*