AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1392700


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1392700 MtrunA17_Chr1g0196541 96.170 731 28 0 43 773 1 731 0.0 1487
Msa1392700 MtrunA17_Chr2g0296781 66.381 699 227 3 43 735 1 697 0.0 952
Msa1392700 MtrunA17_Chr6g0477261 67.857 588 181 3 154 735 1 586 0.0 808
Msa1392700 MtrunA17_Chr5g0441581 42.384 604 330 7 38 633 31 624 1.94e-166 497
Msa1392700 MtrunA17_Chr2g0291581 36.219 566 342 8 39 599 71 622 7.46e-116 365
Msa1392700 MtrunA17_Chr1g0207551 34.549 576 351 8 36 600 31 591 1.97e-109 352
Msa1392700 MtrunA17_Chr2g0329031 31.500 600 384 9 28 618 3 584 6.33e-103 333
Msa1392700 MtrunA17_Chr3g0080351 31.902 652 393 6 38 668 75 696 7.06e-103 335
Msa1392700 MtrunA17_Chr1g0202341 34.321 574 352 11 38 599 50 610 4.04e-102 329
Msa1392700 MtrunA17_Chr5g0448761 34.075 584 365 12 36 606 57 633 1.21e-101 331
Msa1392700 MtrunA17_Chr2g0291591 32.535 501 313 5 38 532 63 544 1.32e-90 295
Msa1392700 MtrunA17_Chr5g0440451 30.731 602 371 14 34 611 38 617 7.08e-84 286
Msa1392700 MtrunA17_Chr5g0448511 33.735 415 267 5 196 609 1 408 2.09e-80 268
Msa1392700 MtrunA17_Chr3g0118611 35.101 396 247 5 204 598 115 501 2.72e-77 265
Msa1392700 MtrunA17_Chr8g0363841 29.661 590 392 12 35 610 10 590 1.04e-69 242
Msa1392700 MtrunA17_Chr2g0324011 27.383 577 384 12 36 595 7 565 2.55e-69 239
Msa1392700 MtrunA17_Chr2g0287061 30.351 570 332 17 38 595 182 698 1.65e-68 241
Msa1392700 MtrunA17_Chr6g0476441 63.235 204 67 3 538 735 1 202 2.93e-67 224
Msa1392700 MtrunA17_Chr2g0287651 26.009 669 449 12 13 657 51 697 3.16e-67 239
Msa1392700 MtrunA17_Chr1g0198761 28.447 573 378 13 42 595 50 609 8.18e-63 224
Msa1392700 MtrunA17_Chr1g0203721 25.795 566 397 8 42 595 66 620 2.18e-60 219
Msa1392700 MtrunA17_Chr6g0458391 25.258 582 395 11 27 595 208 762 3.33e-56 206
Msa1392700 MtrunA17_Chr1g0203051 26.882 558 359 14 45 579 85 616 4.41e-55 201
Msa1392700 MtrunA17_Chr3g0082121 28.272 573 373 19 36 595 40 587 1.90e-53 197
Msa1392700 MtrunA17_Chr2g0276841 25.129 581 387 14 39 595 70 626 5.35e-50 187
Msa1392700 MtrunA17_Chr2g0294841 23.444 755 484 24 39 739 45 759 6.98e-47 179
Msa1392700 MtrunA17_Chr5g0431001 27.252 433 277 12 39 444 61 482 1.87e-41 159
Msa1392700 MtrunA17_Chr2g0290391 24.615 585 388 15 39 595 51 610 5.66e-40 157
Msa1392700 MtrunA17_Chr1g0164591 33.766 231 150 3 198 426 79 308 2.57e-39 148
Msa1392700 MtrunA17_Chr7g0258861 28.269 283 196 4 36 311 7 289 5.92e-32 126
Msa1392700 MtrunA17_Chr6g0476431 56.977 86 37 0 43 128 1 86 3.51e-27 105
Msa1392700 MtrunA17_Chr2g0308841 24.454 229 166 4 370 597 4 226 5.43e-17 82.0
Msa1392700 MtrunA17_Chr1g0172041 36.364 99 62 1 510 608 1 98 3.37e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1392700 AT4G15090.1 33.333 651 399 11 36 667 48 682 9.34e-115 367
Msa1392700 AT4G15090.5 33.333 651 399 11 36 667 48 682 9.34e-115 367
Msa1392700 AT4G15090.3 33.333 651 399 11 36 667 48 682 9.34e-115 367
Msa1392700 AT4G15090.2 33.333 651 399 11 36 667 48 682 9.34e-115 367
Msa1392700 AT4G15090.4 33.333 651 399 11 36 667 48 682 9.34e-115 367
Msa1392700 AT3G22170.2 32.305 616 360 8 13 601 36 621 3.70e-104 339
Msa1392700 AT3G22170.1 32.305 616 360 8 13 601 36 621 3.70e-104 339
Msa1392700 AT1G52520.1 33.791 583 359 13 29 599 72 639 2.69e-101 328
Msa1392700 AT4G38180.1 32.286 573 370 8 36 598 70 634 4.18e-101 330
Msa1392700 AT1G76320.3 32.465 576 351 11 43 605 1 551 5.67e-95 310
Msa1392700 AT1G76320.1 32.465 576 351 11 43 605 1 551 1.02e-94 311
Msa1392700 AT1G76320.4 32.465 576 351 11 43 605 1 551 1.02e-94 311
Msa1392700 AT1G76320.2 32.465 576 351 11 43 605 1 551 1.06e-94 311
Msa1392700 AT1G80010.1 32.929 577 368 11 39 602 95 665 1.17e-93 308
Msa1392700 AT4G19990.3 33.448 583 325 11 42 603 24 564 2.13e-90 300
Msa1392700 AT4G19990.4 33.448 583 325 11 42 603 24 564 2.13e-90 300
Msa1392700 AT4G19990.5 33.448 583 325 11 42 603 24 564 3.23e-90 300
Msa1392700 AT4G19990.7 33.448 583 325 11 42 603 38 578 4.17e-90 300
Msa1392700 AT4G19990.6 33.448 583 325 11 42 603 24 564 4.68e-90 300
Msa1392700 AT4G19990.2 33.448 583 325 11 42 603 24 564 4.68e-90 300
Msa1392700 AT4G19990.1 34.990 503 283 9 104 603 46 507 3.46e-86 288
Msa1392700 AT2G32250.8 35.696 381 237 3 216 595 136 509 1.23e-79 271
Msa1392700 AT2G32250.5 35.696 381 237 3 216 595 177 550 1.30e-79 271
Msa1392700 AT2G32250.7 35.696 381 237 3 216 595 136 509 1.71e-79 271
Msa1392700 AT2G32250.2 35.696 381 237 3 216 595 177 550 2.23e-79 271
Msa1392700 AT2G32250.4 35.696 381 237 3 216 595 177 550 2.23e-79 271
Msa1392700 AT2G32250.6 35.696 381 237 3 216 595 177 550 2.94e-79 271
Msa1392700 AT2G32250.1 35.696 381 237 3 216 595 177 550 2.94e-79 271
Msa1392700 AT2G32250.3 35.696 381 237 3 216 595 177 550 2.94e-79 271
Msa1392700 AT2G27110.2 30.602 598 357 17 38 618 48 604 2.14e-77 267
Msa1392700 AT2G27110.1 30.602 598 357 17 38 618 48 604 2.14e-77 267
Msa1392700 AT2G27110.3 32.543 464 287 9 163 618 14 459 1.15e-74 256
Msa1392700 AT5G18960.2 29.610 564 343 17 38 595 210 725 4.40e-69 243
Msa1392700 AT5G18960.1 29.610 564 343 17 38 595 210 725 4.40e-69 243
Msa1392700 AT4G38170.1 31.313 396 260 5 209 602 18 403 2.09e-68 236
Msa1392700 AT3G06250.2 28.597 563 347 16 38 595 189 701 2.20e-68 241
Msa1392700 AT3G06250.1 28.597 563 347 16 38 595 189 701 2.20e-68 241
Msa1392700 AT3G06250.3 28.597 563 347 16 38 595 189 701 2.20e-68 241
Msa1392700 AT1G10240.2 25.990 581 382 16 39 595 48 604 8.63e-51 189
Msa1392700 AT1G10240.1 25.990 581 382 16 39 595 48 604 8.63e-51 189
Msa1392700 AT5G28530.3 24.747 594 376 17 39 595 55 614 2.89e-42 164
Msa1392700 AT5G28530.2 24.747 594 376 17 39 595 55 614 2.89e-42 164
Msa1392700 AT5G28530.1 24.497 596 379 17 39 595 55 618 3.02e-41 161
Msa1392700 AT5G28530.5 23.356 578 341 19 39 595 55 551 3.86e-28 120
Msa1392700 AT5G28530.4 23.103 580 344 19 39 595 55 555 4.12e-27 117

Find 140 sgRNAs with CRISPR-Local

Find 184 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAATATACAAAATTTATTT+TGG 0.073660 tig0021522:-83806 Msa1392700:CDS
TGGCAATGGTAAATGCTTTC+TGG 0.145575 tig0021522:+83043 None:intergenic
TACTTGAAATTCTTTAAATT+TGG 0.164119 tig0021522:+83023 None:intergenic
GAGTATTTACCCAACATTTC+TGG 0.181169 tig0021522:+83453 None:intergenic
AATTAAAGACGTGGTGTTTA+AGG 0.198475 tig0021522:-82902 Msa1392700:CDS
TGTTGCTTATTTGAGTTTAA+AGG 0.212760 tig0021522:-82841 Msa1392700:CDS
TGTATGTGAAAGACACATTT+TGG 0.241766 tig0021522:-83269 Msa1392700:CDS
ATTGCTTGTGTGAGTCATTT+TGG 0.243877 tig0021522:-83081 Msa1392700:CDS
ATGATAATGAATGGTTAAAA+TGG 0.261144 tig0021522:-83323 Msa1392700:CDS
TACGCTAATCGTGTAGGTTT+TGG 0.267234 tig0021522:-84341 Msa1392700:CDS
AGAATTGCAACGTGTTAATA+TGG 0.267882 tig0021522:-82686 Msa1392700:CDS
GTTCAGAACAGGAAATATTC+TGG 0.287164 tig0021522:+82062 None:intergenic
AGTAGAAGCAACTTCATAAA+AGG 0.295990 tig0021522:+82654 None:intergenic
CTAAATGTCATCCCAGTTCT+AGG 0.302654 tig0021522:+84398 None:intergenic
GGTCTGAAGAAGAAGTTATT+AGG 0.310139 tig0021522:-84376 Msa1392700:CDS
TAATACTAGCTTTGAAAGAT+TGG 0.313945 tig0021522:-82977 Msa1392700:CDS
TTTATGATTTGAGGACAATA+TGG 0.324306 tig0021522:+82085 None:intergenic
TCTGAGCAAAAGTGATTTCA+TGG 0.327773 tig0021522:-83382 Msa1392700:CDS
AGGGCTGCATATGAATATTT+TGG 0.330794 tig0021522:-83768 Msa1392700:CDS
TTCAATAACAATTCTTGAAA+TGG 0.335352 tig0021522:+84142 None:intergenic
TGGTAAATGCTTTCTGGAAA+TGG 0.337237 tig0021522:+83049 None:intergenic
CTAGAACTGGGATGACATTT+AGG 0.343463 tig0021522:-84397 Msa1392700:CDS
CACCATCGATGACGAGCTTT+AGG 0.352465 tig0021522:+83501 None:intergenic
AGGATGGTTGATCATTCTTA+TGG 0.354581 tig0021522:+81937 None:intergenic
CAATGGATATGGATGATAAA+AGG 0.357213 tig0021522:-83827 Msa1392700:CDS
AATGCTTGTGTAGCTTTAGA+TGG 0.358270 tig0021522:-84173 Msa1392700:CDS
TCTTCGGTAATTATGCCATT+TGG 0.360910 tig0021522:+83561 None:intergenic
CTTTGTGTGCTTAAGCTCAT+TGG 0.361479 tig0021522:-82799 Msa1392700:CDS
TTTAGATTGGATGAGAGTTC+GGG 0.368260 tig0021522:-84083 Msa1392700:CDS
ATGGGCATCCTCTTTCAAAA+AGG 0.374223 tig0021522:-82471 Msa1392700:CDS
TTAATCGTATTGAAACTTGT+AGG 0.381649 tig0021522:-81766 Msa1392700:three_prime_UTR
TTGCCATTGGTCCCCTTTGT+TGG 0.383794 tig0021522:-83699 Msa1392700:CDS
TTTCATTGCTTTATCATCTT+CGG 0.384250 tig0021522:+83545 None:intergenic
TAAGGTATCTTTCAATGAAA+AGG 0.385167 tig0021522:-82884 Msa1392700:CDS
ATTTGATGAGCGGCACCGTT+GGG 0.394490 tig0021522:-83298 Msa1392700:CDS
GGGTGTGGGAATCTTACTTC+TGG 0.395908 tig0021522:-83972 Msa1392700:CDS
CAACAGTAACTCTCAGTAAT+GGG 0.407618 tig0021522:-82489 Msa1392700:CDS
TTTGCAGCTGCTATTGTTGT+TGG 0.421819 tig0021522:-84434 Msa1392700:CDS
GAAGATGAAGAACCTAGAAC+TGG 0.423912 tig0021522:-84410 Msa1392700:CDS
ATTTACAGAAAGTGATGAAC+AGG 0.427795 tig0021522:-82612 Msa1392700:CDS
ATACTTATTTGTTAAATAAG+TGG 0.431247 tig0021522:+83725 None:intergenic
ACAATCCTAGTCACGTGGTT+TGG 0.434005 tig0021522:+82517 None:intergenic
AGTTCTAAATTCCTCTCTAC+AGG 0.439637 tig0021522:+84056 None:intergenic
TTTACACTTATAATAGCATT+GGG 0.440864 tig0021522:-81640 Msa1392700:three_prime_UTR
ATATTCTGGTTTATGATTTG+AGG 0.444118 tig0021522:+82076 None:intergenic
AGAGTGTTAAATGTAAAGAT+AGG 0.452463 tig0021522:+81730 None:intergenic
ATTTACACTTATAATAGCAT+TGG 0.452863 tig0021522:-81641 Msa1392700:three_prime_UTR
GACAACATTGAAGCGGTTTG+TGG 0.452916 tig0021522:-83178 Msa1392700:CDS
TATTTGATGAGCGGCACCGT+TGG 0.456287 tig0021522:-83299 Msa1392700:CDS
AAGTAAGACGGCTAAGACTT+GGG 0.460155 tig0021522:-83920 Msa1392700:CDS
TACCTGTAAAAGTTCAGAAC+AGG 0.463097 tig0021522:+82051 None:intergenic
GAAGAAGGTTCCAGAAATGT+TGG 0.468659 tig0021522:-83463 Msa1392700:CDS
TGGATGCTAAAACTCTTACT+TGG 0.470376 tig0021522:-83623 Msa1392700:CDS
TGATGGTTCACTCCAACAAA+GGG 0.476976 tig0021522:+83687 None:intergenic
AAAGTAAGACGGCTAAGACT+TGG 0.482575 tig0021522:-83921 Msa1392700:CDS
TTTGGGCAGATGCGAGATGT+AGG 0.483477 tig0021522:-83788 Msa1392700:CDS
GGTCTATGTCTTTACGAGGA+TGG 0.493066 tig0021522:+81921 None:intergenic
ATGATGGTTCACTCCAACAA+AGG 0.494911 tig0021522:+83686 None:intergenic
TTAACCATTCATTATCATGT+AGG 0.496964 tig0021522:+83328 None:intergenic
CAATCTAAAATACCGTCCTC+TGG 0.503024 tig0021522:+84097 None:intergenic
CCAACAGTAACTCTCAGTAA+TGG 0.503577 tig0021522:-82490 Msa1392700:CDS
AGTATGTTCTTGTGTAATCC+TGG 0.507755 tig0021522:+82546 None:intergenic
GGTGTTGAGATGAATGGGTG+TGG 0.508197 tig0021522:-83987 Msa1392700:CDS
TACTAGCTTTGAAAGATTGG+AGG 0.508243 tig0021522:-82974 Msa1392700:CDS
ACATAGACCAACCACTACTC+TGG 0.508434 tig0021522:-81907 Msa1392700:three_prime_UTR
AAGAAGGTTCCAGAAATGTT+GGG 0.510364 tig0021522:-83462 Msa1392700:CDS
CAACTCCAAACCACGTGACT+AGG 0.513724 tig0021522:-82522 Msa1392700:CDS
GAGGTAAGATATTGCTTCGA+AGG 0.514633 tig0021522:+84221 None:intergenic
TTTGTTGGAGTGAACCATCA+TGG 0.516130 tig0021522:-83684 Msa1392700:CDS
CTGTGGGTGTTGAGATGAAT+GGG 0.521887 tig0021522:-83992 Msa1392700:CDS
AAGTGATTTCATGGAGAGGT+GGG 0.523064 tig0021522:-83373 Msa1392700:CDS
ATTGAATGATAAAATCGAAA+AGG 0.526317 tig0021522:-83139 Msa1392700:CDS
AAATTCTTTAAATTTGGCAA+TGG 0.528148 tig0021522:+83029 None:intergenic
ATTGAACATAATCATGAACT+TGG 0.529122 tig0021522:-84125 Msa1392700:CDS
TTACTTGGTTGTTCACAAGA+TGG 0.537284 tig0021522:-83608 Msa1392700:CDS
TTCCTAAAGCTCGTCATCGA+TGG 0.537412 tig0021522:-83503 Msa1392700:CDS
TTGGGCAGATGCGAGATGTA+GGG 0.538615 tig0021522:-83787 Msa1392700:CDS
ATAACCTACATGATAATGAA+TGG 0.540605 tig0021522:-83332 Msa1392700:CDS
ATTTAAAGAATTTCAAGTAG+AGG 0.542601 tig0021522:-83019 Msa1392700:CDS
CTTGTGGCATATAATGAAGA+AGG 0.550485 tig0021522:-83478 Msa1392700:CDS
ATTACAGCAATGTAAATACA+AGG 0.553033 tig0021522:-81704 Msa1392700:three_prime_UTR
ATAAAATAGTCTGACCATGA+TGG 0.558886 tig0021522:+83670 None:intergenic
AAAGTGATTTCATGGAGAGG+TGG 0.559223 tig0021522:-83374 Msa1392700:CDS
CTTCTAAAGAGCCATCCTCC+AGG 0.560777 tig0021522:-82564 Msa1392700:CDS
GAAAGTGATGAACAGGATCA+AGG 0.562243 tig0021522:-82605 Msa1392700:CDS
GATCAAGGTGGGATTAATGT+TGG 0.565918 tig0021522:-84029 Msa1392700:CDS
TAGAACTCAATGATCAAGGT+GGG 0.568037 tig0021522:-84040 Msa1392700:CDS
TCTGTGGGTGTTGAGATGAA+TGG 0.568290 tig0021522:-83993 Msa1392700:CDS
TACCTCGAAAACACAGTGTA+GGG 0.568827 tig0021522:-84204 Msa1392700:CDS
TTACCTCGAAAACACAGTGT+AGG 0.570982 tig0021522:-84205 Msa1392700:CDS
ATGAATTACGCTAATCGTGT+AGG 0.573095 tig0021522:-84347 Msa1392700:CDS
AATTTAGAACTCAATGATCA+AGG 0.575137 tig0021522:-84044 Msa1392700:CDS
GTGTTGAGATGAATGGGTGT+GGG 0.575538 tig0021522:-83986 Msa1392700:CDS
ATGCATGGACATGCTCCAAA+TGG 0.577612 tig0021522:-83576 Msa1392700:CDS
TAAAATGGTTATTTGATGAG+CGG 0.580254 tig0021522:-83308 Msa1392700:CDS
AAATAAGTATGACTTGCCAT+TGG 0.582213 tig0021522:-83712 Msa1392700:CDS
ACTCAAAGACAACATTGAAG+CGG 0.582318 tig0021522:-83185 Msa1392700:CDS
TAAAATCGAAAAGGAAAGCA+TGG 0.582917 tig0021522:-83130 Msa1392700:CDS
AAACGATCAAAGTCAAGAAG+AGG 0.583429 tig0021522:-82371 Msa1392700:intron
CCATTACTGAGAGTTACTGT+TGG 0.587222 tig0021522:+82490 None:intergenic
AGATATACATTGATGAAACA+TGG 0.592243 tig0021522:-82715 Msa1392700:CDS
ACTCCAACAAAGGGGACCAA+TGG 0.597493 tig0021522:+83696 None:intergenic
CTCGTCATCGATGGTGCTTG+TGG 0.597557 tig0021522:-83494 Msa1392700:CDS
ACATCTTAGTGATGTAAACC+AGG 0.599828 tig0021522:-82196 Msa1392700:intron
TAGCATGTAATTGTGCAAGA+AGG 0.600918 tig0021522:-84265 Msa1392700:CDS
AGACGGCTAAGACTTGGGAG+AGG 0.601064 tig0021522:-83915 Msa1392700:CDS
GGTAGAAATCTTCAATCTGT+GGG 0.601916 tig0021522:-84008 Msa1392700:CDS
AACCACCATGTCCAGAGTAG+TGG 0.606476 tig0021522:+81896 None:intergenic
AATGTGTCTTTCACATACAC+AGG 0.609838 tig0021522:+83273 None:intergenic
CGAAAACACAGTGTAGGGCT+AGG 0.611004 tig0021522:-84199 Msa1392700:CDS
TCTTGTGTAATCCTGGAGGA+TGG 0.617853 tig0021522:+82553 None:intergenic
ATAGCTGCTGTTAAACAAAG+TGG 0.623526 tig0021522:-81873 Msa1392700:three_prime_UTR
ACCAACCACTACTCTGGACA+TGG 0.633901 tig0021522:-81901 Msa1392700:three_prime_UTR
AGATGGTTAGAATGTATGCA+TGG 0.634404 tig0021522:-83591 Msa1392700:CDS
GTTCGGGGCCTCCTGTAGAG+AGG 0.635599 tig0021522:-84067 Msa1392700:CDS
TCTAAATTCCTCTCTACAGG+AGG 0.642714 tig0021522:+84059 None:intergenic
TGGTAGAAATCTTCAATCTG+TGG 0.643326 tig0021522:-84009 Msa1392700:CDS
ATTCTGTGCAGAAAGTAAGA+CGG 0.644927 tig0021522:-83932 Msa1392700:CDS
AACTTGGTCAAACCAGAGGA+CGG 0.650612 tig0021522:-84109 Msa1392700:CDS
ACCATGTCCAGAGTAGTGGT+TGG 0.651376 tig0021522:+81900 None:intergenic
AAGATGAAGAACCTAGAACT+GGG 0.654596 tig0021522:-84409 Msa1392700:CDS
AGTGATTTCATGGAGAGGTG+GGG 0.655787 tig0021522:-83372 Msa1392700:CDS
CAAAACTCCAAAGAACAGCA+AGG 0.655801 tig0021522:-82401 Msa1392700:CDS
GGTTGGTCTATGTCTTTACG+AGG 0.660233 tig0021522:+81917 None:intergenic
AACCACTACTCTGGACATGG+TGG 0.671470 tig0021522:-81898 Msa1392700:three_prime_UTR
TTACAGCAATGTAAATACAA+GGG 0.672978 tig0021522:-81703 Msa1392700:three_prime_UTR
TTAGATTGGATGAGAGTTCG+GGG 0.677484 tig0021522:-84082 Msa1392700:CDS
TCACATACACAGGAACCCAA+CGG 0.679348 tig0021522:+83283 None:intergenic
TCGATGACGAGCTTTAGGAA+AGG 0.682769 tig0021522:+83506 None:intergenic
AAAAGAGAAAATTAAAGACG+TGG 0.683650 tig0021522:-82911 Msa1392700:CDS
GCAAAAGTGATTTCATGGAG+AGG 0.684724 tig0021522:-83377 Msa1392700:CDS
GTGTGCAATATTGTCGAACG+TGG 0.685729 tig0021522:-83643 Msa1392700:CDS
CTGGAATGTCGACTGCACAA+CGG 0.692769 tig0021522:-83245 Msa1392700:CDS
CATGAACTTGGTCAAACCAG+AGG 0.694396 tig0021522:-84113 Msa1392700:CDS
GGTGGAGGAAGTATGTAAAG+CGG 0.705310 tig0021522:-82738 Msa1392700:CDS
GATCAACAATCCTAGTCACG+TGG 0.707154 tig0021522:+82512 None:intergenic
TTTACATACTTCCTCCACCG+TGG 0.708646 tig0021522:+82742 None:intergenic
GATGGTTCACTCCAACAAAG+GGG 0.715401 tig0021522:+83688 None:intergenic
TTAGAACTCAATGATCAAGG+TGG 0.716064 tig0021522:-84041 Msa1392700:CDS
ATGTTCTTGTGTAATCCTGG+AGG 0.762199 tig0021522:+82549 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GAATATACAAAATTTATTTT+GGG - tig0021522:82337-82356 Msa1392700:intron 10.0%
!!! GGAATATACAAAATTTATTT+TGG - tig0021522:82336-82355 Msa1392700:intron 15.0%
!!! ATACTTATTTGTTAAATAAG+TGG + tig0021522:82420-82439 None:intergenic 15.0%
!! TACTTGAAATTCTTTAAATT+TGG + tig0021522:83122-83141 None:intergenic 15.0%
!! AAATAGAGAAAATAAATTTG+TGG + tig0021522:83809-83828 None:intergenic 15.0%
!!! ATAAATAAATGTCTGATTTT+GGG - tig0021522:83866-83885 Msa1392700:CDS 15.0%
!!! ATTTATTTGATTATTTCTTG+TGG - tig0021522:84113-84132 Msa1392700:CDS 15.0%
!! TTCAATAACAATTCTTGAAA+TGG + tig0021522:82003-82022 None:intergenic 20.0%
!!! ATGATAATGAATGGTTAAAA+TGG - tig0021522:82819-82838 Msa1392700:CDS 20.0%
!! ATTGAATGATAAAATCGAAA+AGG - tig0021522:83003-83022 Msa1392700:CDS 20.0%
!! AAATTCTTTAAATTTGGCAA+TGG + tig0021522:83116-83135 None:intergenic 20.0%
!!! ATTTAAAGAATTTCAAGTAG+AGG - tig0021522:83123-83142 Msa1392700:CDS 20.0%
!!! CATAAATAAATGTCTGATTT+TGG - tig0021522:83865-83884 Msa1392700:CDS 20.0%
!! TTATTTGAACATTTACATTG+TGG - tig0021522:84002-84021 Msa1392700:CDS 20.0%
!! ATTTACACTTATAATAGCAT+TGG - tig0021522:84501-84520 Msa1392700:CDS 20.0%
!! TTTACACTTATAATAGCATT+GGG - tig0021522:84502-84521 Msa1392700:CDS 20.0%
! ATTGAACATAATCATGAACT+TGG - tig0021522:82017-82036 Msa1392700:intron 25.0%
!! AATTTAGAACTCAATGATCA+AGG - tig0021522:82098-82117 Msa1392700:intron 25.0%
!! TAGTCAATTTTATTGTGCAA+TGG - tig0021522:82298-82317 Msa1392700:intron 25.0%
!! ATTTTATTGTGCAATGGATA+TGG - tig0021522:82304-82323 Msa1392700:intron 25.0%
! TTTCATTGCTTTATCATCTT+CGG + tig0021522:82600-82619 None:intergenic 25.0%
!! ATAACCTACATGATAATGAA+TGG - tig0021522:82810-82829 Msa1392700:CDS 25.0%
! TTAACCATTCATTATCATGT+AGG + tig0021522:82817-82836 None:intergenic 25.0%
! TAAAATGGTTATTTGATGAG+CGG - tig0021522:82834-82853 Msa1392700:CDS 25.0%
!!! AGTATAGACTCATTTTTTGA+TGG - tig0021522:82926-82945 Msa1392700:CDS 25.0%
!!! GTATAGACTCATTTTTTGAT+GGG - tig0021522:82927-82946 Msa1392700:CDS 25.0%
!!! TAATACTAGCTTTGAAAGAT+TGG - tig0021522:83165-83184 Msa1392700:CDS 25.0%
! AAAAGAGAAAATTAAAGACG+TGG - tig0021522:83231-83250 Msa1392700:CDS 25.0%
!! TAAGGTATCTTTCAATGAAA+AGG - tig0021522:83258-83277 Msa1392700:CDS 25.0%
!! TGTTGCTTATTTGAGTTTAA+AGG - tig0021522:83301-83320 Msa1392700:CDS 25.0%
! AGATATACATTGATGAAACA+TGG - tig0021522:83427-83446 Msa1392700:CDS 25.0%
! TCATCAGTTTCTTGAAAAAT+AGG + tig0021522:83920-83939 None:intergenic 25.0%
!!! AAATAAAAATAAAGAGCACC+AGG + tig0021522:83988-84007 None:intergenic 25.0%
! TTTATGATTTGAGGACAATA+TGG + tig0021522:84060-84079 None:intergenic 25.0%
!!! ATATTCTGGTTTATGATTTG+AGG + tig0021522:84069-84088 None:intergenic 25.0%
! TTAATCGTATTGAAACTTGT+AGG - tig0021522:84376-84395 Msa1392700:CDS 25.0%
!! AGAGTGTTAAATGTAAAGAT+AGG + tig0021522:84415-84434 None:intergenic 25.0%
! ATTACAGCAATGTAAATACA+AGG - tig0021522:84438-84457 Msa1392700:CDS 25.0%
! TTACAGCAATGTAAATACAA+GGG - tig0021522:84439-84458 Msa1392700:CDS 25.0%
AGTTCAAAAAATGCAGATGA+TGG - tig0021522:81837-81856 Msa1392700:three_prime_UTR 30.0%
! TTTTAGATTGGATGAGAGTT+CGG - tig0021522:82058-82077 Msa1392700:CDS 30.0%
CAATGGATATGGATGATAAA+AGG - tig0021522:82315-82334 Msa1392700:intron 30.0%
! TTTTGGTGAAGTCATAACTT+TGG - tig0021522:82391-82410 Msa1392700:CDS 30.0%
! AAATAAGTATGACTTGCCAT+TGG - tig0021522:82430-82449 Msa1392700:CDS 30.0%
ATAAAATAGTCTGACCATGA+TGG + tig0021522:82475-82494 None:intergenic 30.0%
! TCATGGTCAGACTATTTTAT+TGG - tig0021522:82475-82494 Msa1392700:CDS 30.0%
! CATGGTCAGACTATTTTATT+GGG - tig0021522:82476-82495 Msa1392700:CDS 30.0%
! ATGGTCAGACTATTTTATTG+GGG - tig0021522:82477-82496 Msa1392700:CDS 30.0%
AGCAATGAAAAATGCAATTG+AGG - tig0021522:82610-82629 Msa1392700:CDS 30.0%
! TGTATGTGAAAGACACATTT+TGG - tig0021522:82873-82892 Msa1392700:CDS 30.0%
! GTATGTGAAAGACACATTTT+GGG - tig0021522:82874-82893 Msa1392700:CDS 30.0%
TAAAATCGAAAAGGAAAGCA+TGG - tig0021522:83012-83031 Msa1392700:CDS 30.0%
AATTAAAGACGTGGTGTTTA+AGG - tig0021522:83240-83259 Msa1392700:CDS 30.0%
CGTGGCAAAATATAAAAAGA+CGG + tig0021522:83385-83404 None:intergenic 30.0%
! CGTCTTTTTATATTTTGCCA+CGG - tig0021522:83383-83402 Msa1392700:CDS 30.0%
AGAATTGCAACGTGTTAATA+TGG - tig0021522:83456-83475 Msa1392700:CDS 30.0%
AGTAGAAGCAACTTCATAAA+AGG + tig0021522:83491-83510 None:intergenic 30.0%
ATTTACAGAAAGTGATGAAC+AGG - tig0021522:83530-83549 Msa1392700:CDS 30.0%
!!! TTATTTTCCTTGCTGTTCTT+TGG + tig0021522:83751-83770 None:intergenic 30.0%
!!! GTCTGATTTTGGGTTTTTTA+TGG - tig0021522:83876-83895 Msa1392700:CDS 30.0%
!!! ATTTTGGGTTTTTTATGGCA+GGG - tig0021522:83881-83900 Msa1392700:CDS 30.0%
! GATTATTTCTTGTGGTAACA+TGG - tig0021522:84121-84140 Msa1392700:CDS 30.0%
AAGATGAAGAACCTAGAACT+GGG - tig0021522:81733-81752 Msa1392700:three_prime_UTR 35.0%
GGTCTGAAGAAGAAGTTATT+AGG - tig0021522:81766-81785 Msa1392700:three_prime_UTR 35.0%
ATGAATTACGCTAATCGTGT+AGG - tig0021522:81795-81814 Msa1392700:three_prime_UTR 35.0%
TAGCATGTAATTGTGCAAGA+AGG - tig0021522:81877-81896 Msa1392700:three_prime_UTR 35.0%
!! AATGCTTGTGTAGCTTTAGA+TGG - tig0021522:81969-81988 Msa1392700:intron 35.0%
TTTAGATTGGATGAGAGTTC+GGG - tig0021522:82059-82078 Msa1392700:CDS 35.0%
!! AGTTCTAAATTCCTCTCTAC+AGG + tig0021522:82089-82108 None:intergenic 35.0%
TTAGAACTCAATGATCAAGG+TGG - tig0021522:82101-82120 Msa1392700:intron 35.0%
TAGAACTCAATGATCAAGGT+GGG - tig0021522:82102-82121 Msa1392700:intron 35.0%
TGGTAGAAATCTTCAATCTG+TGG - tig0021522:82133-82152 Msa1392700:intron 35.0%
GGTAGAAATCTTCAATCTGT+GGG - tig0021522:82134-82153 Msa1392700:intron 35.0%
ATTCTGTGCAGAAAGTAAGA+CGG - tig0021522:82210-82229 Msa1392700:CDS 35.0%
! AGGGCTGCATATGAATATTT+TGG - tig0021522:82374-82393 Msa1392700:CDS 35.0%
TGGATGCTAAAACTCTTACT+TGG - tig0021522:82519-82538 Msa1392700:CDS 35.0%
TTACTTGGTTGTTCACAAGA+TGG - tig0021522:82534-82553 Msa1392700:CDS 35.0%
AGATGGTTAGAATGTATGCA+TGG - tig0021522:82551-82570 Msa1392700:CDS 35.0%
TCTTCGGTAATTATGCCATT+TGG + tig0021522:82584-82603 None:intergenic 35.0%
CTTGTGGCATATAATGAAGA+AGG - tig0021522:82664-82683 Msa1392700:CDS 35.0%
AAGAAGGTTCCAGAAATGTT+GGG - tig0021522:82680-82699 Msa1392700:CDS 35.0%
GAGTATTTACCCAACATTTC+TGG + tig0021522:82692-82711 None:intergenic 35.0%
! GTCTATCAAAACACTTTTGC+AGG - tig0021522:82721-82740 Msa1392700:CDS 35.0%
TCTGAGCAAAAGTGATTTCA+TGG - tig0021522:82760-82779 Msa1392700:CDS 35.0%
AATGTGTCTTTCACATACAC+AGG + tig0021522:82872-82891 None:intergenic 35.0%
ACTCAAAGACAACATTGAAG+CGG - tig0021522:82957-82976 Msa1392700:CDS 35.0%
! ATTGCTTGTGTGAGTCATTT+TGG - tig0021522:83061-83080 Msa1392700:CDS 35.0%
! TGGTAAATGCTTTCTGGAAA+TGG + tig0021522:83096-83115 None:intergenic 35.0%
!! TACTAGCTTTGAAAGATTGG+AGG - tig0021522:83168-83187 Msa1392700:CDS 35.0%
! CTTTTTATATTTTGCCACGG+TGG - tig0021522:83386-83405 Msa1392700:CDS 35.0%
AGTATGTTCTTGTGTAATCC+TGG + tig0021522:83599-83618 None:intergenic 35.0%
CAACAGTAACTCTCAGTAAT+GGG - tig0021522:83653-83672 Msa1392700:CDS 35.0%
!! GATGTCTTCCTTTTTGAAAG+AGG + tig0021522:83682-83701 None:intergenic 35.0%
AAACGATCAAAGTCAAGAAG+AGG - tig0021522:83771-83790 Msa1392700:CDS 35.0%
!!! GATTTTGGGTTTTTTATGGC+AGG - tig0021522:83880-83899 Msa1392700:CDS 35.0%
ACATCTTAGTGATGTAAACC+AGG - tig0021522:83946-83965 Msa1392700:CDS 35.0%
! GGTTCTATATTTTCATCACC+TGG + tig0021522:83967-83986 None:intergenic 35.0%
GGTGATGAAAATATAGAACC+TGG - tig0021522:83967-83986 Msa1392700:CDS 35.0%
TGATAAAACATCTGTGTCGT+AGG - tig0021522:84032-84051 Msa1392700:CDS 35.0%
GTTCAGAACAGGAAATATTC+TGG + tig0021522:84083-84102 None:intergenic 35.0%
!! TTCCTGTTCTGAACTTTTAC+AGG - tig0021522:84089-84108 Msa1392700:CDS 35.0%
TACCTGTAAAAGTTCAGAAC+AGG + tig0021522:84094-84113 None:intergenic 35.0%
AGGATGGTTGATCATTCTTA+TGG + tig0021522:84208-84227 None:intergenic 35.0%
ATAGCTGCTGTTAAACAAAG+TGG - tig0021522:84269-84288 Msa1392700:CDS 35.0%
TTTGCAGCTGCTATTGTTGT+TGG - tig0021522:81708-81727 Msa1392700:three_prime_UTR 40.0%
GAAGATGAAGAACCTAGAAC+TGG - tig0021522:81732-81751 Msa1392700:three_prime_UTR 40.0%
CTAAATGTCATCCCAGTTCT+AGG + tig0021522:81747-81766 None:intergenic 40.0%
CTAGAACTGGGATGACATTT+AGG - tig0021522:81745-81764 Msa1392700:three_prime_UTR 40.0%
! TACGCTAATCGTGTAGGTTT+TGG - tig0021522:81801-81820 Msa1392700:three_prime_UTR 40.0%
GAGGTAAGATATTGCTTCGA+AGG + tig0021522:81924-81943 None:intergenic 40.0%
TTACCTCGAAAACACAGTGT+AGG - tig0021522:81937-81956 Msa1392700:CDS 40.0%
TACCTCGAAAACACAGTGTA+GGG - tig0021522:81938-81957 Msa1392700:CDS 40.0%
! CAATCTAAAATACCGTCCTC+TGG + tig0021522:82048-82067 None:intergenic 40.0%
!! CAGAGGACGGTATTTTAGAT+TGG - tig0021522:82046-82065 Msa1392700:intron 40.0%
TTAGATTGGATGAGAGTTCG+GGG - tig0021522:82060-82079 Msa1392700:CDS 40.0%
TCTAAATTCCTCTCTACAGG+AGG + tig0021522:82086-82105 None:intergenic 40.0%
GATCAAGGTGGGATTAATGT+TGG - tig0021522:82113-82132 Msa1392700:intron 40.0%
AAAGTAAGACGGCTAAGACT+TGG - tig0021522:82221-82240 Msa1392700:CDS 40.0%
AAGTAAGACGGCTAAGACTT+GGG - tig0021522:82222-82241 Msa1392700:CDS 40.0%
TGATGGTTCACTCCAACAAA+GGG + tig0021522:82458-82477 None:intergenic 40.0%
ATGATGGTTCACTCCAACAA+AGG + tig0021522:82459-82478 None:intergenic 40.0%
TTTGTTGGAGTGAACCATCA+TGG - tig0021522:82458-82477 Msa1392700:CDS 40.0%
GAAGAAGGTTCCAGAAATGT+TGG - tig0021522:82679-82698 Msa1392700:CDS 40.0%
! CAAAACACTTTTGCAGGATG+TGG - tig0021522:82727-82746 Msa1392700:CDS 40.0%
GCAAAAGTGATTTCATGGAG+AGG - tig0021522:82765-82784 Msa1392700:CDS 40.0%
AAAGTGATTTCATGGAGAGG+TGG - tig0021522:82768-82787 Msa1392700:CDS 40.0%
AAGTGATTTCATGGAGAGGT+GGG - tig0021522:82769-82788 Msa1392700:CDS 40.0%
TGGCAATGGTAAATGCTTTC+TGG + tig0021522:83102-83121 None:intergenic 40.0%
CTTTGTGTGCTTAAGCTCAT+TGG - tig0021522:83343-83362 Msa1392700:CDS 40.0%
! TTTATATTTTGCCACGGTGG+AGG - tig0021522:83389-83408 Msa1392700:CDS 40.0%
GAAAGTGATGAACAGGATCA+AGG - tig0021522:83537-83556 Msa1392700:CDS 40.0%
ATGTTCTTGTGTAATCCTGG+AGG + tig0021522:83596-83615 None:intergenic 40.0%
CCATTACTGAGAGTTACTGT+TGG + tig0021522:83655-83674 None:intergenic 40.0%
CCAACAGTAACTCTCAGTAA+TGG - tig0021522:83652-83671 Msa1392700:CDS 40.0%
ATGGGCATCCTCTTTCAAAA+AGG - tig0021522:83671-83690 Msa1392700:CDS 40.0%
CAAAACTCCAAAGAACAGCA+AGG - tig0021522:83741-83760 Msa1392700:CDS 40.0%
TGCCTGCAAAAAGAACACAT+GGG + tig0021522:84180-84199 None:intergenic 40.0%
! GTAAGCTAGAACTTTTGTGC+GGG + tig0021522:84479-84498 None:intergenic 40.0%
! CGTAAGCTAGAACTTTTGTG+CGG + tig0021522:84480-84499 None:intergenic 40.0%
CATGAACTTGGTCAAACCAG+AGG - tig0021522:82029-82048 Msa1392700:intron 45.0%
AACTTGGTCAAACCAGAGGA+CGG - tig0021522:82033-82052 Msa1392700:intron 45.0%
!! TCTGTGGGTGTTGAGATGAA+TGG - tig0021522:82149-82168 Msa1392700:intron 45.0%
!! CTGTGGGTGTTGAGATGAAT+GGG - tig0021522:82150-82169 Msa1392700:intron 45.0%
GTGTTGAGATGAATGGGTGT+GGG - tig0021522:82156-82175 Msa1392700:intron 45.0%
GATGGTTCACTCCAACAAAG+GGG + tig0021522:82457-82476 None:intergenic 45.0%
GTGTGCAATATTGTCGAACG+TGG - tig0021522:82499-82518 Msa1392700:CDS 45.0%
ATGCATGGACATGCTCCAAA+TGG - tig0021522:82566-82585 Msa1392700:CDS 45.0%
!! TCGATGACGAGCTTTAGGAA+AGG + tig0021522:82639-82658 None:intergenic 45.0%
TTCCTAAAGCTCGTCATCGA+TGG - tig0021522:82639-82658 Msa1392700:CDS 45.0%
AGTGATTTCATGGAGAGGTG+GGG - tig0021522:82770-82789 Msa1392700:CDS 45.0%
TCACATACACAGGAACCCAA+CGG + tig0021522:82862-82881 None:intergenic 45.0%
! GTGAAAGACACATTTTGGGC+TGG - tig0021522:82878-82897 Msa1392700:CDS 45.0%
GACAACATTGAAGCGGTTTG+TGG - tig0021522:82964-82983 Msa1392700:CDS 45.0%
TTTACATACTTCCTCCACCG+TGG + tig0021522:83403-83422 None:intergenic 45.0%
! GGTGGAGGAAGTATGTAAAG+CGG - tig0021522:83404-83423 Msa1392700:CDS 45.0%
TCTTGTGTAATCCTGGAGGA+TGG + tig0021522:83592-83611 None:intergenic 45.0%
ACAATCCTAGTCACGTGGTT+TGG + tig0021522:83628-83647 None:intergenic 45.0%
GATCAACAATCCTAGTCACG+TGG + tig0021522:83633-83652 None:intergenic 45.0%
! TGCCCATGTGTTCTTTTTGC+AGG - tig0021522:84175-84194 Msa1392700:CDS 45.0%
GTGCCTGCAAAAAGAACACA+TGG + tig0021522:84181-84200 None:intergenic 45.0%
GGTCTATGTCTTTACGAGGA+TGG + tig0021522:84224-84243 None:intergenic 45.0%
!! GGTTGGTCTATGTCTTTACG+AGG + tig0021522:84228-84247 None:intergenic 45.0%
ACATAGACCAACCACTACTC+TGG - tig0021522:84235-84254 Msa1392700:CDS 45.0%
! AGCCCTACACTGTGTTTTCG+AGG + tig0021522:81943-81962 None:intergenic 50.0%
CGAAAACACAGTGTAGGGCT+AGG - tig0021522:81943-81962 Msa1392700:CDS 50.0%
! GGTGTTGAGATGAATGGGTG+TGG - tig0021522:82155-82174 Msa1392700:intron 50.0%
GGGTGTGGGAATCTTACTTC+TGG - tig0021522:82170-82189 Msa1392700:intron 50.0%
TTTGGGCAGATGCGAGATGT+AGG - tig0021522:82354-82373 Msa1392700:intron 50.0%
TTGGGCAGATGCGAGATGTA+GGG - tig0021522:82355-82374 Msa1392700:intron 50.0%
TTGCCATTGGTCCCCTTTGT+TGG - tig0021522:82443-82462 Msa1392700:CDS 50.0%
ACTCCAACAAAGGGGACCAA+TGG + tig0021522:82449-82468 None:intergenic 50.0%
CACCATCGATGACGAGCTTT+AGG + tig0021522:82644-82663 None:intergenic 50.0%
TATTTGATGAGCGGCACCGT+TGG - tig0021522:82843-82862 Msa1392700:CDS 50.0%
ATTTGATGAGCGGCACCGTT+GGG - tig0021522:82844-82863 Msa1392700:CDS 50.0%
! CTGGAATGTCGACTGCACAA+CGG - tig0021522:82897-82916 Msa1392700:CDS 50.0%
! CTTCTAAAGAGCCATCCTCC+AGG - tig0021522:83578-83597 Msa1392700:CDS 50.0%
CAACTCCAAACCACGTGACT+AGG - tig0021522:83620-83639 Msa1392700:CDS 50.0%
ACCAACCACTACTCTGGACA+TGG - tig0021522:84241-84260 Msa1392700:CDS 50.0%
ACCATGTCCAGAGTAGTGGT+TGG + tig0021522:84245-84264 None:intergenic 50.0%
AACCACTACTCTGGACATGG+TGG - tig0021522:84244-84263 Msa1392700:CDS 50.0%
AACCACCATGTCCAGAGTAG+TGG + tig0021522:84249-84268 None:intergenic 50.0%
AGACGGCTAAGACTTGGGAG+AGG - tig0021522:82227-82246 Msa1392700:CDS 55.0%
CTCGTCATCGATGGTGCTTG+TGG - tig0021522:82648-82667 Msa1392700:CDS 55.0%
GTTCGGGGCCTCCTGTAGAG+AGG - tig0021522:82075-82094 Msa1392700:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0021522 gene 81630 84534 81630 ID=Msa1392700;Name=Msa1392700
tig0021522 mRNA 81630 84534 81630 ID=Msa1392700-mRNA-1;Parent=Msa1392700;Name=Msa1392700-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|1|0.75|1|1|1|4|302|773
tig0021522 exon 81630 81967 81630 ID=Msa1392700-mRNA-1:exon:13368;Parent=Msa1392700-mRNA-1
tig0021522 exon 82054 82110 82054 ID=Msa1392700-mRNA-1:exon:13367;Parent=Msa1392700-mRNA-1
tig0021522 exon 82197 82262 82197 ID=Msa1392700-mRNA-1:exon:13366;Parent=Msa1392700-mRNA-1
tig0021522 exon 82372 84534 82372 ID=Msa1392700-mRNA-1:exon:13365;Parent=Msa1392700-mRNA-1
tig0021522 CDS 82372 84534 82372 ID=Msa1392700-mRNA-1:cds;Parent=Msa1392700-mRNA-1
tig0021522 CDS 82197 82262 82197 ID=Msa1392700-mRNA-1:cds;Parent=Msa1392700-mRNA-1
tig0021522 CDS 82054 82110 82054 ID=Msa1392700-mRNA-1:cds;Parent=Msa1392700-mRNA-1
tig0021522 CDS 81932 81967 81932 ID=Msa1392700-mRNA-1:cds;Parent=Msa1392700-mRNA-1
tig0021522 three_prime_UTR 81630 81931 81630 ID=Msa1392700-mRNA-1:three_prime_utr;Parent=Msa1392700-mRNA-1
Gene Sequence

>Msa1392700

TTGTATTTAGTGGAAGAAATAGTTGTATCATGTGATAAAGTTGAAAAAAGTGAAGCAAATAAAAGAAGTGATGATAAATTTGCAGCTGCTATTGTTGTTGGTGAAGATGAAGAACCTAGAACTGGGATGACATTTAGGTCTGAAGAAGAAGTTATTAGGTATTACATGAATTACGCTAATCGTGTAGGTTTTGGAGTTACAAAAATAAGTTCAAAAAATGCAGATGATGGAAAGAAGTATTTTACTCTAGCATGTAATTGTGCAAGAAGGTATGTGAGTACTTCGAAGAATCCTTCGAAGCAATATCTTACCTCGAAAACACAGTGTAGGGCTAGGTTGAATGCTTGTGTAGCTTTAGATGGATCGAGTACCATTTCAAGAATTGTTATTGAACATAATCATGAACTTGGTCAAACCAGAGGACGGTATTTTAGATTGGATGAGAGTTCGGGGCCTCCTGTAGAGAGGAATTTAGAACTCAATGATCAAGGTGGGATTAATGTTGGTAGAAATCTTCAATCTGTGGGTGTTGAGATGAATGGGTGTGGGAATCTTACTTCTGGAGAAAATGATTGTAGAAATTCTGTGCAGAAAGTAAGACGGCTAAGACTTGGGAGAGGAGATGTTGATGCAATTCATAGCTTTTTTCATAGAATGCAAAAGCAAAATAGTCAATTTTATTGTGCAATGGATATGGATGATAAAAGGAATATACAAAATTTATTTTGGGCAGATGCGAGATGTAGGGCTGCATATGAATATTTTGGTGAAGTCATAACTTTGGACACCACTTATTTAACAAATAAGTATGACTTGCCATTGGTCCCCTTTGTTGGAGTGAACCATCATGGTCAGACTATTTTATTGGGGTGTGCAATATTGTCGAACGTGGATGCTAAAACTCTTACTTGGTTGTTCACAAGATGGTTAGAATGTATGCATGGACATGCTCCAAATGGCATAATTACCGAAGATGATAAAGCAATGAAAAATGCAATTGAGGTTGCCTTTCCTAAAGCTCGTCATCGATGGTGCTTGTGGCATATAATGAAGAAGGTTCCAGAAATGTTGGGTAAATACTCTCGTAATGAGTCTATCAAAACACTTTTGCAGGATGTGGTATATGACTCTCTGAGCAAAAGTGATTTCATGGAGAGGTGGGGAAATATGATAGAACATTATAACCTACATGATAATGAATGGTTAAAATGGTTATTTGATGAGCGGCACCGTTGGGTTCCTGTGTATGTGAAAGACACATTTTGGGCTGGAATGTCGACTGCACAACGGAATGAAAGTATAGACTCATTTTTTGATGGGTATGTTAACTCAAAGACAACATTGAAGCGGTTTGTGGAACAGTATGACGATGCATTGAATGATAAAATCGAAAAGGAAAGCATGGCTGATTTTGATTCATTTAACTCAACAATTGCTTGTGTGAGTCATTTTGGCTTTGAAGTCCATTTCCAGAAAGCATTTACCATTGCCAAATTTAAAGAATTTCAAGTAGAGGTCTCTTCTATGATGTATTGTAATACTAGCTTTGAAAGATTGGAGGACTTGAATTCTATATTCTCTGTTACTGAAAATAAGAAAGTAAAAGAGAAAATTAAAGACGTGGTGTTTAAGGTATCTTTCAATGAAAAGGACTTCAAATTGCAGTGCACGTGTTGCTTATTTGAGTTTAAAGGAATTTTATGTAGACACATTCTTTGTGTGCTTAAGCTCATTGGCAAAACAGATTCAATGCCGTCTTTTTATATTTTGCCACGGTGGAGGAAGTATGTAAAGCGGAGATATACATTGATGAAACATGGTTTTGAAGAATTGCAACGTGTTAATATGGCATGTGATGCCTTTTATGAAGTTGCTTCTACTATGATAAATTCTGAAGATGATTTACAGAAAGTGATGAACAGGATCAAGGACTTGAAAACTGTGTTATCTTCTAAAGAGCCATCCTCCAGGATTACACAAGAACATACTTCAACTCCAAACCACGTGACTAGGATTGTTGATCCAACAGTAACTCTCAGTAATGGGCATCCTCTTTCAAAAAGGAAGACATCTAATGTTGATCAAATTTTAAAGAAGAAGCTTGCAAGACACAAAACTCCAAAGAACAGCAAGGAAAATAAAAACGATCAAAGTCAAGAAGAGGGCTCATTGTGTACACCTATTTTTCAAGAAACTGATGATGAAGAACATCTTAGTGATGTAAACCAGGTTCCATATTGTCCTCAAATCATAAACCAGAATATTTCCTGTTCTGAACTTTTACAGGCACAACACCATAAGAATGATCAACCATCCTCGTAA

Protein sequence

>Msa1392700

LYLVEEIVVSCDKVEKSEANKRSDDKFAAAIVVGEDEEPRTGMTFRSEEEVIRYYMNYANRVGFGVTKISSKNADDGKKYFTLACNCARRYVSTSKNPSKQYLTSKTQCRARLNACVALDGSSTISRIVIEHNHELGQTRGRYFRLDESSGPPVERNLELNDQGGINVGRNLQSVGVEMNGCGNLTSGENDCRNSVQKVRRLRLGRGDVDAIHSFFHRMQKQNSQFYCAMDMDDKRNIQNLFWADARCRAAYEYFGEVITLDTTYLTNKYDLPLVPFVGVNHHGQTILLGCAILSNVDAKTLTWLFTRWLECMHGHAPNGIITEDDKAMKNAIEVAFPKARHRWCLWHIMKKVPEMLGKYSRNESIKTLLQDVVYDSLSKSDFMERWGNMIEHYNLHDNEWLKWLFDERHRWVPVYVKDTFWAGMSTAQRNESIDSFFDGYVNSKTTLKRFVEQYDDALNDKIEKESMADFDSFNSTIACVSHFGFEVHFQKAFTIAKFKEFQVEVSSMMYCNTSFERLEDLNSIFSVTENKKVKEKIKDVVFKVSFNEKDFKLQCTCCLFEFKGILCRHILCVLKLIGKTDSMPSFYILPRWRKYVKRRYTLMKHGFEELQRVNMACDAFYEVASTMINSEDDLQKVMNRIKDLKTVLSSKEPSSRITQEHTSTPNHVTRIVDPTVTLSNGHPLSKRKTSNVDQILKKKLARHKTPKNSKENKNDQSQEEGSLCTPIFQETDDEEHLSDVNQVPYCPQIINQNISCSELLQAQHHKNDQPSS*