AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0832150


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832150 MtrunA17_Chr5g0393791 93.435 655 39 2 3 654 4 657 0.0 1236
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0832150 AT2G14680.3 50.389 643 294 8 7 642 2 626 0.0 570
Msa0832150 AT2G14680.1 50.389 643 294 8 7 642 2 626 0.0 570
Msa0832150 AT2G14680.2 49.247 664 293 9 7 642 2 649 0.0 561
Msa0832150 AT2G14680.7 50.954 524 242 6 7 524 2 516 8.54e-158 466
Msa0832150 AT2G14680.5 50.954 524 242 6 7 524 2 516 8.54e-158 466
Msa0832150 AT2G14680.4 49.634 546 239 8 7 524 2 539 6.12e-154 457
Msa0832150 AT2G14680.6 54.036 446 201 2 7 448 2 447 2.05e-146 433
Msa0832150 AT2G14680.8 45.941 505 252 6 141 642 2 488 6.95e-135 405

Find 133 sgRNAs with CRISPR-Local

Find 575 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGAACTTCCCTTCATTATT+TGG 0.150983 5_4:+5205262 None:intergenic
TGGTATCGTCACATTCTTTC+TGG 0.151805 5_4:+5208856 None:intergenic
TTCATCAATCACATTGATTA+TGG 0.178551 5_4:+5208114 None:intergenic
ACTTCGGAAGGTACAGTTTC+TGG 0.183709 5_4:-5203757 Msa0832150:CDS
TCTCTTAGATGGACCAAATT+TGG 0.191395 5_4:+5208061 None:intergenic
CTCTTTCTTCGTCTCTTAGA+TGG 0.229424 5_4:+5208050 None:intergenic
GAAGAAGAGAATCAATTTAA+TGG 0.236342 5_4:-5208341 Msa0832150:CDS
CAACTCAACTTTCACGTTCT+TGG 0.242212 5_4:-5203242 Msa0832150:three_prime_UTR
TAATTGAACGAATTGGAAAT+TGG 0.258619 5_4:+5211791 None:intergenic
CTTCATTGATAGCACCATTA+AGG 0.261072 5_4:+5203722 None:intergenic
TGAGAATATTGAGCCAAATT+TGG 0.288586 5_4:-5208074 Msa0832150:CDS
AATTTCCAATTCGTTCAATT+AGG 0.301060 5_4:-5211789 Msa0832150:five_prime_UTR
TGTTAAATGTACATGCCTTT+TGG 0.315765 5_4:-5208826 Msa0832150:CDS
TCATGATGATGAATCATTAT+TGG 0.322762 5_4:-5211692 Msa0832150:CDS
TATTGTGTTAATCTTTGATA+TGG 0.331925 5_4:-5211737 Msa0832150:intron
ACTTCAAAAGAACTTGTTAC+AGG 0.339806 5_4:-5206973 Msa0832150:intron
GCAAGAAGAAAGACATCTAT+TGG 0.342788 5_4:-5207036 Msa0832150:CDS
GCAGGAACATCAATTACTTC+TGG 0.343090 5_4:-5206276 Msa0832150:CDS
GGTGTTTCAGAAGTCCTTAA+TGG 0.343534 5_4:-5203736 Msa0832150:CDS
AAATCTTACAATGTATTTAG+AGG 0.353616 5_4:+5208764 None:intergenic
ATAGGCTTCGCCTCTCTCTT+TGG 0.354087 5_4:-5204969 Msa0832150:CDS
ATTTAACTTCGTCAATTCAT+AGG 0.358490 5_4:-5204987 Msa0832150:CDS
AGTTCGATGAAGTAAAATTA+AGG 0.363787 5_4:-5203473 Msa0832150:exon
CGTTACTCCTTACAGAATAC+TGG 0.364686 5_4:-5207307 Msa0832150:intron
CAAAACCTAATTGAACGAAT+TGG 0.372786 5_4:+5211784 None:intergenic
GTCTCAACTGACCAACTAAT+AGG 0.378600 5_4:+5203664 None:intergenic
ATTGATTATGGATTTAATAG+TGG 0.381058 5_4:+5208126 None:intergenic
TGGATGACTCTGAGGAGTTA+TGG 0.381091 5_4:-5208806 Msa0832150:CDS
CTCGCTGCACCGCATTAATC+AGG 0.391497 5_4:-5203450 Msa0832150:three_prime_UTR
ATGGAAGCCACTACGGTTCC+TGG 0.392938 5_4:-5203502 Msa0832150:CDS
TTAATAAGTTCTTTCAGATC+AGG 0.393271 5_4:-5208887 Msa0832150:CDS
GGTGAAAGCTCTAATGGAAT+TGG 0.400555 5_4:-5206309 Msa0832150:CDS
AATCCACACTGCTGGATCTC+TGG 0.402816 5_4:+5205236 None:intergenic
TCTACAAGACCAACTTTCTC+AGG 0.404211 5_4:-5211379 Msa0832150:CDS
GTTCTTCAGTCTTTATTTGA+AGG 0.406546 5_4:+5206994 None:intergenic
TGAAAAGGTGAAAGCTCTAA+TGG 0.407201 5_4:-5206315 Msa0832150:CDS
GGTCAAGGAGTCTTTGACTT+CGG 0.431264 5_4:-5203773 Msa0832150:CDS
TTCTGCTGCCGGGTTTGAAA+TGG 0.432606 5_4:-5203563 Msa0832150:CDS
AGCAATGGCATTGCATGAAA+AGG 0.433720 5_4:-5207230 Msa0832150:intron
GGTATCGTCACATTCTTTCT+GGG 0.435822 5_4:+5208857 None:intergenic
GAATACTGGTCTTGTCTCAT+TGG 0.436292 5_4:-5207293 Msa0832150:CDS
GCAGCTCCTTACCTATTAGT+TGG 0.439726 5_4:-5203675 Msa0832150:CDS
ACTGTCTTCAAAGTAAACTT+AGG 0.442891 5_4:-5208501 Msa0832150:CDS
ATTGGCTCGTATCCGACAAC+TGG 0.446264 5_4:-5211674 Msa0832150:CDS
AGCTACTGCGTTTGCTGAAA+GGG 0.447316 5_4:-5211259 Msa0832150:CDS
TTCGATATTCTTTGAATGCT+CGG 0.449192 5_4:+5211317 None:intergenic
ATAGACACTGTTTCTGCTGC+CGG 0.449437 5_4:-5203574 Msa0832150:CDS
CTCAACTTTCACGTTCTTGG+AGG 0.451643 5_4:-5203239 Msa0832150:three_prime_UTR
AAATACATGGCTTCCTCAAA+AGG 0.453150 5_4:-5211097 Msa0832150:intron
GAGTGCATTAGAAGAGCAGC+TGG 0.463535 5_4:-5208545 Msa0832150:CDS
GACAGTAGTCCAAATAATGA+AGG 0.469907 5_4:-5205271 Msa0832150:CDS
TTATGACTTTACTTCGTGAT+GGG 0.473550 5_4:-5208153 Msa0832150:CDS
ACTTCAGGTTACTAATGAAA+AGG 0.473839 5_4:-5206330 Msa0832150:intron
TCAAACCCTTCAAAATAAGT+TGG 0.474280 5_4:-5211427 Msa0832150:CDS
GAAAGAGAAGAGAATGAATG+TGG 0.474461 5_4:-5208034 Msa0832150:CDS
CTTCATCGAACTTCTGTACC+AGG 0.480559 5_4:+5203484 None:intergenic
TAAAACTGTTTCACAGTCCA+AGG 0.482871 5_4:-5207987 Msa0832150:intron
TAGACACTGTTTCTGCTGCC+GGG 0.488971 5_4:-5203573 Msa0832150:CDS
TGTACATTTAACATCCCAAC+TGG 0.489928 5_4:+5208836 None:intergenic
TACTGAATTTGTCAAGTCAA+GGG 0.490617 5_4:-5203385 Msa0832150:three_prime_UTR
ACTAATCAAGGAGTTGATAG+TGG 0.490706 5_4:-5205403 Msa0832150:CDS
ATGTGATTGATGAAAGAGTC+AGG 0.492265 5_4:-5208105 Msa0832150:CDS
ATTATGACTTTACTTCGTGA+TGG 0.492351 5_4:-5208154 Msa0832150:CDS
TTCTGTAAGCCTGAGAAAGT+TGG 0.497201 5_4:+5211370 None:intergenic
ACATACCGTGTTCCAGTTGT+CGG 0.502743 5_4:+5211662 None:intergenic
ATGAACAAAGTGATTGAGAA+TGG 0.505576 5_4:-5208220 Msa0832150:CDS
CTTGTTATTCGTGAAAGAGA+TGG 0.508903 5_4:-5205370 Msa0832150:CDS
TCTCATCACTGCATTGCTGA+TGG 0.509734 5_4:+5203599 None:intergenic
TTACTGAATTTGTCAAGTCA+AGG 0.510256 5_4:-5203386 Msa0832150:three_prime_UTR
GAGACGATGGATTGGCCCAT+TGG 0.511766 5_4:-5205314 Msa0832150:CDS
TTCTTCAGTCTTTATTTGAA+GGG 0.514902 5_4:+5206995 None:intergenic
CCTTGCAAAATCCACACTGC+TGG 0.515938 5_4:+5205228 None:intergenic
TCATATTTGAGACGATGGAT+TGG 0.516447 5_4:-5205322 Msa0832150:CDS
TGCTGCCGGGTTTGAAATGG+TGG 0.517440 5_4:-5203560 Msa0832150:CDS
CTGCACCGCATTAATCAGGC+AGG 0.517669 5_4:-5203446 Msa0832150:three_prime_UTR
AAAGAGAAGAGAATGAATGT+GGG 0.518802 5_4:-5208033 Msa0832150:CDS
CATGTGCAGAAAATTAGATC+AGG 0.521678 5_4:-5205428 Msa0832150:intron
TAAAGAAAGCATGGATAGCA+TGG 0.524410 5_4:-5205013 Msa0832150:CDS
GGTGATGATGTAAAATTCAA+AGG 0.525421 5_4:-5203424 Msa0832150:three_prime_UTR
GTGATGATGTAAAATTCAAA+GGG 0.526100 5_4:-5203423 Msa0832150:three_prime_UTR
TAGCTACTGCGTTTGCTGAA+AGG 0.528244 5_4:-5211260 Msa0832150:CDS
TGCAACTCTTAAAGAAAGCA+TGG 0.529784 5_4:-5205022 Msa0832150:CDS
TTTAACTAATAAGATGAAGG+AGG 0.533069 5_4:+5203297 None:intergenic
TGATATGGCTGCTGAGGCCG+AGG 0.534961 5_4:-5211722 Msa0832150:exon
ATCATCATGATTCATATCCT+CGG 0.539362 5_4:+5211705 None:intergenic
AACTGACCAACTAATAGGTA+AGG 0.540289 5_4:+5203669 None:intergenic
ACGCAGTAGCTACACAGCCC+TGG 0.545060 5_4:+5211271 None:intergenic
TTAACTAATAAGATGAAGGA+GGG 0.550275 5_4:+5203298 None:intergenic
AGAATGTGACGATACCAGTT+GGG 0.552570 5_4:-5208850 Msa0832150:CDS
CTGTCTTCAAAGTAAACTTA+GGG 0.555011 5_4:-5208500 Msa0832150:CDS
CTCAGATTGTTGTAAGCAGA+AGG 0.556195 5_4:-5210947 Msa0832150:CDS
GGAATTGGCACAATTGAAGC+AGG 0.557492 5_4:-5206294 Msa0832150:CDS
AGAAATCATATTTGAGACGA+TGG 0.558916 5_4:-5205327 Msa0832150:CDS
AAGGAGTCTTTGACTTCGGA+AGG 0.559930 5_4:-5203769 Msa0832150:CDS
TTAGATCAGGAGACTAATCA+AGG 0.561665 5_4:-5205415 Msa0832150:CDS
TGCTCAGATGTTGAGGGACA+TGG 0.562240 5_4:-5203521 Msa0832150:CDS
GCTTCGCCTCTCTCTTTGGA+AGG 0.562484 5_4:-5204965 Msa0832150:intron
GTAGCGACACTAAGATAAGC+AGG 0.563235 5_4:+5211483 None:intergenic
ATATTTAACTAATAAGATGA+AGG 0.563572 5_4:+5203294 None:intergenic
GAGGGACATGGAAGCCACTA+CGG 0.572703 5_4:-5203509 Msa0832150:CDS
AAGAATGTGACGATACCAGT+TGG 0.572783 5_4:-5208851 Msa0832150:CDS
ACTCCTCAGAGTCATCCAAA+AGG 0.573589 5_4:+5208811 None:intergenic
CAGCTATGTATGCAACAAGC+TGG 0.576538 5_4:-5211507 Msa0832150:CDS
ACTGAATTTGTCAAGTCAAG+GGG 0.577996 5_4:-5203384 Msa0832150:three_prime_UTR
TATGACTTTACTTCGTGATG+GGG 0.578429 5_4:-5208152 Msa0832150:CDS
GAGACAGAAGTCGGTTACAC+TGG 0.578968 5_4:-5203646 Msa0832150:CDS
TCATTGGCAGTAAAAGCTGA+TGG 0.579584 5_4:-5207277 Msa0832150:CDS
TGGTCAGTTGAGACAGAAGT+CGG 0.581873 5_4:-5203655 Msa0832150:CDS
AAAAGCCAAGGAAAAGGAGG+AGG 0.585798 5_4:-5211132 Msa0832150:CDS
AAGGGATCATGCAATAATTG+AGG 0.586653 5_4:-5211241 Msa0832150:intron
TCTTACAATGTATTTAGAGG+TGG 0.588977 5_4:+5208767 None:intergenic
AATCTTTGATATGGCTGCTG+AGG 0.592047 5_4:-5211728 Msa0832150:exon
TAGATTAAGAGTTTCTCTTG+TGG 0.593045 5_4:+5211398 None:intergenic
CTTCTGCTTACAACAATCTG+AGG 0.600713 5_4:+5210948 None:intergenic
CGGTTACACTGGAGATAGTG+AGG 0.607655 5_4:-5203635 Msa0832150:CDS
AACATCACGCATAAAGTGCA+TGG 0.615979 5_4:+5203168 None:intergenic
ACAGTAGTCCAAATAATGAA+GGG 0.616824 5_4:-5205270 Msa0832150:CDS
AAGCTCCACCATTTCAAACC+CGG 0.617983 5_4:+5203555 None:intergenic
AAGAGAAGAGAATGAATGTG+GGG 0.621694 5_4:-5208032 Msa0832150:CDS
GCAGTAAAAGCTGATGGACA+AGG 0.622626 5_4:-5207271 Msa0832150:CDS
GCGATGTCACAACAAATACA+TGG 0.634762 5_4:-5211110 Msa0832150:CDS
ATGATACCTTCCAAAGAGAG+AGG 0.637585 5_4:+5204959 None:intergenic
GGACAAAGTAAACAATTCTG+TGG 0.642709 5_4:-5208524 Msa0832150:CDS
TGCACCGCATTAATCAGGCA+GGG 0.652000 5_4:-5203445 Msa0832150:three_prime_UTR
CATAAAAGAATATGATCGTG+TGG 0.653438 5_4:+5203345 None:intergenic
ATTGGCCCATTGGATGCTAG+TGG 0.655848 5_4:-5205304 Msa0832150:CDS
TCTTCAAAGTAAACTTAGGG+TGG 0.656435 5_4:-5208497 Msa0832150:intron
CGTATCCGACAACTGGAACA+CGG 0.656929 5_4:-5211667 Msa0832150:intron
ATCACCCTGCCTGATTAATG+CGG 0.658035 5_4:+5203441 None:intergenic
TTCTGTACCAGGAACCGTAG+TGG 0.665561 5_4:+5203495 None:intergenic
GGTTACACTGGAGATAGTGA+GGG 0.686893 5_4:-5203634 Msa0832150:CDS
CAACCAGAGATCCAGCAGTG+TGG 0.705158 5_4:-5205239 Msa0832150:CDS
TGATTGATGAAAGAGTCAGG+AGG 0.830978 5_4:-5208102 Msa0832150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATAATAAGTATAAAGAAAA+AGG + chr5_4:5206012-5206031 None:intergenic 10.0%
!! TATTATTATTATGAATTTAC+AGG - chr5_4:5206031-5206050 Msa0832150:intron 10.0%
!!! TTTATATTAACTTTTTACTA+TGG + chr5_4:5208824-5208843 None:intergenic 10.0%
!! TAATCTTAATTATTTGTAAT+TGG - chr5_4:5209123-5209142 Msa0832150:intron 10.0%
!!! TTCTGATTTTATTATATATT+TGG - chr5_4:5209764-5209783 Msa0832150:intron 10.0%
!! ATTAAAGTGAAAATGAAAAT+AGG + chr5_4:5204383-5204402 None:intergenic 15.0%
!!! TTCTTTTTAAATAACTAGAA+AGG + chr5_4:5204577-5204596 None:intergenic 15.0%
!!! ACTTTTTCATTTTTATTCAA+CGG + chr5_4:5204831-5204850 None:intergenic 15.0%
!!! GTTAGTTTTATAATTTGTTT+CGG - chr5_4:5204874-5204893 Msa0832150:intron 15.0%
!!! TTAGTTTTATAATTTGTTTC+GGG - chr5_4:5204875-5204894 Msa0832150:intron 15.0%
!!! TTTTTGGTAATGAAAAAATA+CGG + chr5_4:5205778-5205797 None:intergenic 15.0%
!! GATTAAACTATTGAAAAATA+AGG + chr5_4:5206532-5206551 None:intergenic 15.0%
!! ATTGAGAATTGAAAATATTA+TGG - chr5_4:5207170-5207189 Msa0832150:intron 15.0%
!!! AAAAAAAAAAAGAGAAGTAT+AGG - chr5_4:5207221-5207240 Msa0832150:intron 15.0%
!!! ATACAAAAATTTCATAGTTT+TGG + chr5_4:5210022-5210041 None:intergenic 15.0%
!!! GAAAGCTTAATTTTTTTAAA+CGG - chr5_4:5211131-5211150 Msa0832150:CDS 15.0%
!! ATATTTAACTAATAAGATGA+AGG + chr5_4:5211653-5211672 None:intergenic 15.0%
!!! TGTATTATTTTTGTTTGTTT+TGG - chr5_4:5211798-5211817 Msa0832150:five_prime_UTR 15.0%
!! TATTGTGTTAATCTTTGATA+TGG - chr5_4:5203207-5203226 Msa0832150:three_prime_UTR 20.0%
!!! CCTTCTTAAATTTTTCATTT+TGG + chr5_4:5204066-5204085 None:intergenic 20.0%
!! CCAAAATGAAAAATTTAAGA+AGG - chr5_4:5204063-5204082 Msa0832150:intron 20.0%
!! AACAAGAAAGGAAATTAAAT+GGG + chr5_4:5204105-5204124 None:intergenic 20.0%
!!! AAAGTATTTGTTACAACTAT+TGG - chr5_4:5204222-5204241 Msa0832150:intron 20.0%
!!! ATTTTGCGAAAATAACATTT+AGG - chr5_4:5204336-5204355 Msa0832150:intron 20.0%
!!! TTTTGCGAAAATAACATTTA+GGG - chr5_4:5204337-5204356 Msa0832150:intron 20.0%
!!! AATGTTTTTAGAAAGTAAAC+AGG - chr5_4:5204622-5204641 Msa0832150:intron 20.0%
!!! ATGTTTTTCAAATTCAAGTA+AGG + chr5_4:5204751-5204770 None:intergenic 20.0%
!! ATTTGAAAAACATTGTCAAT+AGG - chr5_4:5204758-5204777 Msa0832150:intron 20.0%
!! TTGTGTTTATATAAGACTTT+CGG - chr5_4:5205079-5205098 Msa0832150:intron 20.0%
!! GAAGTGAAGTAATTAATATT+TGG + chr5_4:5205824-5205843 None:intergenic 20.0%
!! AAATCTTACAATGTATTTAG+AGG + chr5_4:5206183-5206202 None:intergenic 20.0%
!! ATTGAAAAATAAGGTTAACA+AGG + chr5_4:5206523-5206542 None:intergenic 20.0%
!!! AACATCATCATTTTAAGTAT+AGG - chr5_4:5206761-5206780 Msa0832150:intron 20.0%
!!! ACATCATCATTTTAAGTATA+GGG - chr5_4:5206762-5206781 Msa0832150:intron 20.0%
!! ATTGATTATGGATTTAATAG+TGG + chr5_4:5206821-5206840 None:intergenic 20.0%
!! AAAGCAAAAACTAAATACAT+GGG + chr5_4:5207773-5207792 None:intergenic 20.0%
!! AAAAGCAAAAACTAAATACA+TGG + chr5_4:5207774-5207793 None:intergenic 20.0%
!! ATATATTTGCATCTGATTTA+TGG - chr5_4:5207819-5207838 Msa0832150:intron 20.0%
!!! TTTGTGTTATTTATAAGTGT+TGG - chr5_4:5208083-5208102 Msa0832150:CDS 20.0%
!! TATCTTATTGTTGAAATTTG+GGG + chr5_4:5208313-5208332 None:intergenic 20.0%
!! GTATCTTATTGTTGAAATTT+GGG + chr5_4:5208314-5208333 None:intergenic 20.0%
!! AGTATCTTATTGTTGAAATT+TGG + chr5_4:5208315-5208334 None:intergenic 20.0%
!! AGATACTATATAGACTATAT+TGG - chr5_4:5208328-5208347 Msa0832150:intron 20.0%
!!! TTTTGATATTATCCAATACT+CGG - chr5_4:5208557-5208576 Msa0832150:intron 20.0%
!! AAAATATTATTTCCGAGTAT+TGG + chr5_4:5208572-5208591 None:intergenic 20.0%
!!! ATTCAATATTTTTGTATCTC+TGG - chr5_4:5208722-5208741 Msa0832150:intron 20.0%
!!! TTCAATATTTTTGTATCTCT+GGG - chr5_4:5208723-5208742 Msa0832150:intron 20.0%
!! AAAAATAGATTTAGATGCTA+AGG + chr5_4:5208786-5208805 None:intergenic 20.0%
!! AAGAAATTATACTTTCAGAT+TGG + chr5_4:5209235-5209254 None:intergenic 20.0%
!! ATTATATATTTGGATGACTT+TGG - chr5_4:5209774-5209793 Msa0832150:intron 20.0%
!! AAACTATTTAAGTAAACAGA+AGG + chr5_4:5209871-5209890 None:intergenic 20.0%
!!! TTTGTATTTGAAAGTATTTG+AGG - chr5_4:5210035-5210054 Msa0832150:intron 20.0%
!!! TTGTATTTGAAAGTATTTGA+GGG - chr5_4:5210036-5210055 Msa0832150:intron 20.0%
!!! TTTAAAGTTGGAAAACAATT+GGG + chr5_4:5210559-5210578 None:intergenic 20.0%
!!! TTTTAAAGTTGGAAAACAAT+TGG + chr5_4:5210560-5210579 None:intergenic 20.0%
! TAATTGAACGAATTGGAAAT+TGG + chr5_4:5203156-5203175 None:intergenic 25.0%
! AATTTCCAATTCGTTCAATT+AGG - chr5_4:5203155-5203174 Msa0832150:three_prime_UTR 25.0%
!! TCATGATGATGAATCATTAT+TGG - chr5_4:5203252-5203271 Msa0832150:three_prime_UTR 25.0%
!! AAGAATGCATTTTCAAAGAT+TGG - chr5_4:5203484-5203503 Msa0832150:exon 25.0%
!! TTTTTCATCAACTAACTAAC+AGG - chr5_4:5203785-5203804 Msa0832150:intron 25.0%
! TATAAAGAAGTGGAAAGATT+GGG + chr5_4:5203882-5203901 None:intergenic 25.0%
! ATATAAAGAAGTGGAAAGAT+TGG + chr5_4:5203883-5203902 None:intergenic 25.0%
! GAACAAGAAAGGAAATTAAA+TGG + chr5_4:5204106-5204125 None:intergenic 25.0%
! TTGTTATCTAGTGTATTACT+GGG + chr5_4:5204204-5204223 None:intergenic 25.0%
!! TTTGTTATCTAGTGTATTAC+TGG + chr5_4:5204205-5204224 None:intergenic 25.0%
!! TATTTGTTACAACTATTGGA+AGG - chr5_4:5204226-5204245 Msa0832150:intron 25.0%
! GAAAATGAAAATAGGAAACA+TGG + chr5_4:5204375-5204394 None:intergenic 25.0%
! TCAGAAAATGAAAACAGATA+GGG + chr5_4:5204443-5204462 None:intergenic 25.0%
! TTCAGAAAATGAAAACAGAT+AGG + chr5_4:5204444-5204463 None:intergenic 25.0%
!! AAACAATGAACAGAATGTTT+TGG + chr5_4:5204479-5204498 None:intergenic 25.0%
! TTAAATAACTAGAAAGGAGA+TGG + chr5_4:5204571-5204590 None:intergenic 25.0%
! TTTAGTGTACTTTGGTATTT+AGG - chr5_4:5204916-5204935 Msa0832150:intron 25.0%
! TTAGTGTACTTTGGTATTTA+GGG - chr5_4:5204917-5204936 Msa0832150:intron 25.0%
!! GTATTTAGGGATTTTATTGA+AGG - chr5_4:5204930-5204949 Msa0832150:intron 25.0%
! GTTCATCAACTAATTATCAA+AGG + chr5_4:5205121-5205140 None:intergenic 25.0%
! AAATTCTATGATACACCTTT+AGG + chr5_4:5205195-5205214 None:intergenic 25.0%
!! AGGTGTATCATAGAATTTTA+AGG - chr5_4:5205197-5205216 Msa0832150:intron 25.0%
!!! AATTTTAAGGCTTAGAGTTT+GGG - chr5_4:5205210-5205229 Msa0832150:intron 25.0%
!!! ACATTTTGACTAGAGATATA+TGG + chr5_4:5205312-5205331 None:intergenic 25.0%
! TCTAGTCAAAATGTGAATTT+GGG - chr5_4:5205318-5205337 Msa0832150:CDS 25.0%
! AATTAGTCCTTATAAGGTTT+GGG + chr5_4:5205633-5205652 None:intergenic 25.0%
! AAATTAGTCCTTATAAGGTT+TGG + chr5_4:5205634-5205653 None:intergenic 25.0%
! AAACCTTATAAGGACTAATT+TGG - chr5_4:5205633-5205652 Msa0832150:intron 25.0%
!!! CAGTGCAAAAATAAGTTTTT+TGG + chr5_4:5205794-5205813 None:intergenic 25.0%
!!! CGATTTTGCAAACTTTATTT+TGG + chr5_4:5205861-5205880 None:intergenic 25.0%
!!! TGCTAAAAGTATTTGCATTT+AGG - chr5_4:5205924-5205943 Msa0832150:intron 25.0%
!!! ATTTTTTCGTAGTGTGTAAT+GGG - chr5_4:5205969-5205988 Msa0832150:intron 25.0%
! TTAATAAGTTCTTTCAGATC+AGG - chr5_4:5206057-5206076 Msa0832150:intron 25.0%
! ATTGTAAGATTTCAGAATCT+TGG - chr5_4:5206191-5206210 Msa0832150:intron 25.0%
!! TTTTCCATTTTGAATGCTTT+AGG - chr5_4:5206558-5206577 Msa0832150:intron 25.0%
!! TTTCCATTTTGAATGCTTTA+GGG - chr5_4:5206559-5206578 Msa0832150:intron 25.0%
! GAAGAAGAGAATCAATTTAA+TGG - chr5_4:5206603-5206622 Msa0832150:intron 25.0%
!! TTCATCAATCACATTGATTA+TGG + chr5_4:5206833-5206852 None:intergenic 25.0%
! TTGTGTAAATGTTCAAGATA+AGG + chr5_4:5207151-5207170 None:intergenic 25.0%
!! CAACAAAAATGAGTTTTTCT+CGG - chr5_4:5207264-5207283 Msa0832150:CDS 25.0%
!! AACAAAAATGAGTTTTTCTC+GGG - chr5_4:5207265-5207284 Msa0832150:CDS 25.0%
!! ATTTTTCTGTATCAGATTCA+GGG + chr5_4:5207379-5207398 None:intergenic 25.0%
!! AATTTTTCTGTATCAGATTC+AGG + chr5_4:5207380-5207399 None:intergenic 25.0%
! ATACATTTGAGAAGTTTAAG+AGG - chr5_4:5207426-5207445 Msa0832150:intron 25.0%
! TTTAGATAAGTTAATCCTGT+TGG - chr5_4:5207465-5207484 Msa0832150:intron 25.0%
! CAACAAATATCACTGAAATA+AGG + chr5_4:5207582-5207601 None:intergenic 25.0%
! TGAATTTCAAAAATTGCATC+TGG + chr5_4:5207606-5207625 None:intergenic 25.0%
! CATTAAAATAATGTGACTGA+TGG + chr5_4:5207748-5207767 None:intergenic 25.0%
!! TTCTTCAGTCTTTATTTGAA+GGG + chr5_4:5207952-5207971 None:intergenic 25.0%
! ATATCTTTGCTTCAAACAAT+TGG - chr5_4:5208006-5208025 Msa0832150:CDS 25.0%
! AAACAATTGGAACATTTAGA+TGG - chr5_4:5208019-5208038 Msa0832150:CDS 25.0%
!!! TATGATTACTTTTCTCAAGA+TGG - chr5_4:5208693-5208712 Msa0832150:intron 25.0%
!!! TATCTCTGGGTATTTTTATT+AGG - chr5_4:5208736-5208755 Msa0832150:intron 25.0%
! AAGATAAAGTTACTTACACA+TGG - chr5_4:5208843-5208862 Msa0832150:CDS 25.0%
! TGGAGATCATAAAAGAAATA+CGG + chr5_4:5209196-5209215 None:intergenic 25.0%
!! TTTCTTTTATGATCTCCAAA+AGG - chr5_4:5209198-5209217 Msa0832150:intron 25.0%
!! TTGGATTTTATCAAACCTTT+TGG + chr5_4:5209216-5209235 None:intergenic 25.0%
!!! TTTGCACTTTTTTCTTTTGT+TGG - chr5_4:5209431-5209450 Msa0832150:intron 25.0%
!!! TTTCTTCAGCAAGTTTTTTA+GGG + chr5_4:5209602-5209621 None:intergenic 25.0%
!!! ATTTCTTCAGCAAGTTTTTT+AGG + chr5_4:5209603-5209622 None:intergenic 25.0%
!! ATTTAACTTCGTCAATTCAT+AGG - chr5_4:5209957-5209976 Msa0832150:intron 25.0%
! AATTTCATTGATGTGAGATT+TGG + chr5_4:5210165-5210184 None:intergenic 25.0%
! ATCAATGAAATTTAGATTCG+TGG - chr5_4:5210173-5210192 Msa0832150:intron 25.0%
! TCAATGAAATTTAGATTCGT+GGG - chr5_4:5210174-5210193 Msa0832150:intron 25.0%
! TGTAAAGAACTCATTGATAA+TGG + chr5_4:5210408-5210427 None:intergenic 25.0%
! TCTTTACAAAGAGATACTAA+AGG - chr5_4:5210420-5210439 Msa0832150:intron 25.0%
!! GTAGAAATTAAGTTTGTTCT+AGG + chr5_4:5210475-5210494 None:intergenic 25.0%
! TTAGTGTACTTAGATACTAA+AGG + chr5_4:5210791-5210810 None:intergenic 25.0%
! TCCTTGACCTAAAATTTATA+AGG + chr5_4:5211160-5211179 None:intergenic 25.0%
!! TCAATGAAGCAAAACTTTTA+AGG - chr5_4:5211236-5211255 Msa0832150:intron 25.0%
! AGTTCGATGAAGTAAAATTA+AGG - chr5_4:5211471-5211490 Msa0832150:CDS 25.0%
!! GTGATGATGTAAAATTCAAA+GGG - chr5_4:5211521-5211540 Msa0832150:CDS 25.0%
! TTAACTAATAAGATGAAGGA+GGG + chr5_4:5211649-5211668 None:intergenic 25.0%
! TTTAACTAATAAGATGAAGG+AGG + chr5_4:5211650-5211669 None:intergenic 25.0%
CAAAACCTAATTGAACGAAT+TGG + chr5_4:5203163-5203182 None:intergenic 30.0%
ATCATCATGATTCATATCCT+CGG + chr5_4:5203242-5203261 None:intergenic 30.0%
TCAAACCCTTCAAAATAAGT+TGG - chr5_4:5203517-5203536 Msa0832150:CDS 30.0%
TAGATTAAGAGTTTCTCTTG+TGG + chr5_4:5203549-5203568 None:intergenic 30.0%
TTCGATATTCTTTGAATGCT+CGG + chr5_4:5203630-5203649 None:intergenic 30.0%
GAAAAATTTAAGCTGCTTCT+CGG + chr5_4:5203654-5203673 None:intergenic 30.0%
! AAGCAGCTTAAATTTTTCCA+GGG - chr5_4:5203656-5203675 Msa0832150:CDS 30.0%
CTTTCCACTTCTTTATATGA+AGG - chr5_4:5203885-5203904 Msa0832150:intron 30.0%
!! TTTTGATTCATCTCTAACAC+AGG - chr5_4:5203960-5203979 Msa0832150:intron 30.0%
ATCTATTCCTAAGAAACTGT+AGG + chr5_4:5204143-5204162 None:intergenic 30.0%
TAGGAAACATGGAAACTAAA+GGG + chr5_4:5204364-5204383 None:intergenic 30.0%
ATAGGAAACATGGAAACTAA+AGG + chr5_4:5204365-5204384 None:intergenic 30.0%
!!! TTGTTTTGAACTTGAATGCT+TGG - chr5_4:5204652-5204671 Msa0832150:intron 30.0%
TATAAAACTCCCTGTTGAAA+GGG - chr5_4:5204683-5204702 Msa0832150:intron 30.0%
ACCAATTGTAGGTCTATTAT+AGG - chr5_4:5204722-5204741 Msa0832150:intron 30.0%
!!! TTTGTTTCGGGTTTTCAAAT+TGG - chr5_4:5204887-5204906 Msa0832150:intron 30.0%
!!! TTGTTTCGGGTTTTCAAATT+GGG - chr5_4:5204888-5204907 Msa0832150:intron 30.0%
!!! GGGATTATTTTAGTGTACTT+TGG - chr5_4:5204908-5204927 Msa0832150:intron 30.0%
TGTCTAAATAACCACATAGT+CGG - chr5_4:5205046-5205065 Msa0832150:intron 30.0%
CTTTCGGTATAAACATTTAG+AGG - chr5_4:5205095-5205114 Msa0832150:intron 30.0%
TATGCCTTTGACTAAAAACT+CGG + chr5_4:5205165-5205184 None:intergenic 30.0%
!!! GAATTTTAAGGCTTAGAGTT+TGG - chr5_4:5205209-5205228 Msa0832150:intron 30.0%
AACCTTGAAAACTAGTTCAA+GGG - chr5_4:5205249-5205268 Msa0832150:CDS 30.0%
GTTTCATCCTTATAAGACTT+GGG + chr5_4:5205285-5205304 None:intergenic 30.0%
AGTTTCATCCTTATAAGACT+TGG + chr5_4:5205286-5205305 None:intergenic 30.0%
CTCTAGTCAAAATGTGAATT+TGG - chr5_4:5205317-5205336 Msa0832150:CDS 30.0%
AGTCAATAACAGATCTTTGA+TGG - chr5_4:5205403-5205422 Msa0832150:CDS 30.0%
CATGTCAGTTGTCAAAAAAT+CGG - chr5_4:5205514-5205533 Msa0832150:intron 30.0%
!! TTTGATACCATCTGAGATTT+TGG - chr5_4:5205569-5205588 Msa0832150:intron 30.0%
!!! CATTTTTTCGTAGTGTGTAA+TGG - chr5_4:5205968-5205987 Msa0832150:intron 30.0%
! TGTTAAATGTACATGCCTTT+TGG - chr5_4:5206118-5206137 Msa0832150:intron 30.0%
TCTTACAATGTATTTAGAGG+TGG + chr5_4:5206180-5206199 None:intergenic 30.0%
GTTTCAGTGATAATTACACA+AGG - chr5_4:5206220-5206239 Msa0832150:intron 30.0%
CAAATTGAGTAACCAGAATA+AGG + chr5_4:5206250-5206269 None:intergenic 30.0%
! CTTATTCTGGTTACTCAATT+TGG - chr5_4:5206248-5206267 Msa0832150:intron 30.0%
ACTGTCTTCAAAGTAAACTT+AGG - chr5_4:5206443-5206462 Msa0832150:intron 30.0%
CTGTCTTCAAAGTAAACTTA+GGG - chr5_4:5206444-5206463 Msa0832150:intron 30.0%
! AAACCCTAAAGCATTCAAAA+TGG + chr5_4:5206565-5206584 None:intergenic 30.0%
!!! ATTTTGAATGCTTTAGGGTT+TGG - chr5_4:5206564-5206583 Msa0832150:intron 30.0%
AAATCTGCAAATAAGTCATC+AGG + chr5_4:5206702-5206721 None:intergenic 30.0%
ATGAACAAAGTGATTGAGAA+TGG - chr5_4:5206724-5206743 Msa0832150:intron 30.0%
ATTATGACTTTACTTCGTGA+TGG - chr5_4:5206790-5206809 Msa0832150:intron 30.0%
TTATGACTTTACTTCGTGAT+GGG - chr5_4:5206791-5206810 Msa0832150:intron 30.0%
TGAGAATATTGAGCCAAATT+TGG - chr5_4:5206870-5206889 Msa0832150:intron 30.0%
AAAGAGAAGAGAATGAATGT+GGG - chr5_4:5206911-5206930 Msa0832150:intron 30.0%
!! GTGAAACAGTTTTATCTTGA+TGG + chr5_4:5206951-5206970 None:intergenic 30.0%
!! CATGAGATTTTCTTTGAGAA+AGG + chr5_4:5207010-5207029 None:intergenic 30.0%
ATTTCAGTCTAATAACGGTT+AGG + chr5_4:5207295-5207314 None:intergenic 30.0%
GCTCAATTTCAGTCTAATAA+CGG + chr5_4:5207300-5207319 None:intergenic 30.0%
GTATTCTTCATCATCAGATT+GGG + chr5_4:5207346-5207365 None:intergenic 30.0%
TGTATTCTTCATCATCAGAT+TGG + chr5_4:5207347-5207366 None:intergenic 30.0%
! TCTGATGATGAAGAATACAA+TGG - chr5_4:5207348-5207367 Msa0832150:intron 30.0%
! CTGATGATGAAGAATACAAT+GGG - chr5_4:5207349-5207368 Msa0832150:intron 30.0%
ATGACATTGCTCTTCTTAAT+AGG - chr5_4:5207495-5207514 Msa0832150:intron 30.0%
TGCAATTAAATGTCCTAAGT+TGG - chr5_4:5207540-5207559 Msa0832150:intron 30.0%
!!! TTCATCTGATGTTTTAGCAA+TGG - chr5_4:5207699-5207718 Msa0832150:intron 30.0%
!! TAGTTTTTGCTTTTCCTCTT+AGG - chr5_4:5207780-5207799 Msa0832150:intron 30.0%
! GTTCTTCAGTCTTTATTTGA+AGG + chr5_4:5207953-5207972 None:intergenic 30.0%
!! ACTTCAAAAGAACTTGTTAC+AGG - chr5_4:5207971-5207990 Msa0832150:intron 30.0%
CTTGAGATGAGTTTATAAAG+AGG - chr5_4:5208242-5208261 Msa0832150:intron 30.0%
GCTGTAAATTTGTAGTATCT+TGG - chr5_4:5208367-5208386 Msa0832150:CDS 30.0%
! ATTTGTAGTATCTTGGTCTT+TGG - chr5_4:5208374-5208393 Msa0832150:intron 30.0%
!!! AGCATAGCTTTATTTTCTGA+AGG + chr5_4:5208446-5208465 None:intergenic 30.0%
! ATGTATATGCCTGTGATTTT+CGG - chr5_4:5208496-5208515 Msa0832150:intron 30.0%
!!! GCACATGTGGTTTTAAAATT+TGG + chr5_4:5208532-5208551 None:intergenic 30.0%
ATCAATCATTCATACCTCAA+AGG - chr5_4:5208893-5208912 Msa0832150:CDS 30.0%
!!! GAAACAGTGTTCTAGTTTTT+TGG - chr5_4:5209023-5209042 Msa0832150:intron 30.0%
AGTTTGGTATACTTGACTAT+TGG - chr5_4:5209375-5209394 Msa0832150:intron 30.0%
TATACTTGACTATTGGTGAA+TGG - chr5_4:5209382-5209401 Msa0832150:intron 30.0%
ACAAGCAGAAAAATGAAATG+AGG + chr5_4:5209412-5209431 None:intergenic 30.0%
! AGAAATCATATTTGAGACGA+TGG - chr5_4:5209617-5209636 Msa0832150:intron 30.0%
ACAGTAGTCCAAATAATGAA+GGG - chr5_4:5209674-5209693 Msa0832150:intron 30.0%
AAGAACTTCCCTTCATTATT+TGG + chr5_4:5209685-5209704 None:intergenic 30.0%
! GCAAGGTATGTGTTAATTTT+TGG - chr5_4:5209733-5209752 Msa0832150:intron 30.0%
!!! GGAAACATTTTTTGTCATAG+AGG + chr5_4:5209842-5209861 None:intergenic 30.0%
TAAGTAAACAGAAGGATGAA+AGG + chr5_4:5209863-5209882 None:intergenic 30.0%
!! TTTGAAAGTATTTGAGGGAA+AGG - chr5_4:5210041-5210060 Msa0832150:intron 30.0%
AAAAATGCAATCCCAACATT+AGG + chr5_4:5210078-5210097 None:intergenic 30.0%
!!! CTTGTGGTTATTTTGGTTAT+TGG + chr5_4:5210217-5210236 None:intergenic 30.0%
! TTTATTCTTTGGTTCGATTG+TGG + chr5_4:5210292-5210311 None:intergenic 30.0%
! GCTCTATCTTGTTTATTCTT+TGG + chr5_4:5210303-5210322 None:intergenic 30.0%
ACAGAATTGTTTACCAAGTT+TGG - chr5_4:5210340-5210359 Msa0832150:intron 30.0%
!! AGAACTCATTGATAATGGAT+TGG + chr5_4:5210403-5210422 None:intergenic 30.0%
ACTTAGATACTAAAGGTTGA+AGG + chr5_4:5210784-5210803 None:intergenic 30.0%
TTTGCATTTCAACAAAATCG+TGG + chr5_4:5211038-5211057 None:intergenic 30.0%
AATAACATGATAAGATTCCG+TGG + chr5_4:5211098-5211117 None:intergenic 30.0%
! ACGGTTGCCTTATAAATTTT+AGG - chr5_4:5211150-5211169 Msa0832150:intron 30.0%
!! GCCTTATAAATTTTAGGTCA+AGG - chr5_4:5211156-5211175 Msa0832150:intron 30.0%
! GGTGATGATGTAAAATTCAA+AGG - chr5_4:5211520-5211539 Msa0832150:CDS 30.0%
TTACTGAATTTGTCAAGTCA+AGG - chr5_4:5211558-5211577 Msa0832150:intron 30.0%
TACTGAATTTGTCAAGTCAA+GGG - chr5_4:5211559-5211578 Msa0832150:intron 30.0%
CATAAAAGAATATGATCGTG+TGG + chr5_4:5211602-5211621 None:intergenic 30.0%
!!! AACCATGCACTTTTTTTGAA+AGG - chr5_4:5211747-5211766 Msa0832150:intron 30.0%
! TTCCTTTCAAAAAAAGTGCA+TGG + chr5_4:5211752-5211771 None:intergenic 30.0%
!!! GCACTTTTTTTGAAAGGAAT+AGG - chr5_4:5211753-5211772 Msa0832150:intron 30.0%
!!! AGCAGCCAACTTATTTTGAA+GGG + chr5_4:5203525-5203544 None:intergenic 35.0%
!!! AAGCAGCCAACTTATTTTGA+AGG + chr5_4:5203526-5203545 None:intergenic 35.0%
! GAAGCAGCTTAAATTTTTCC+AGG - chr5_4:5203655-5203674 Msa0832150:CDS 35.0%
AAGGGATCATGCAATAATTG+AGG - chr5_4:5203703-5203722 Msa0832150:CDS 35.0%
ATCATGCAATAATTGAGGTG+AGG - chr5_4:5203708-5203727 Msa0832150:CDS 35.0%
AAATACATGGCTTCCTCAAA+AGG - chr5_4:5203847-5203866 Msa0832150:intron 35.0%
TGGTCCTTCATATAAAGAAG+TGG + chr5_4:5203892-5203911 None:intergenic 35.0%
CATGCAGACAGTATTAAACA+TGG + chr5_4:5203912-5203931 None:intergenic 35.0%
TTTAATACTGTCTGCATGCA+TGG - chr5_4:5203914-5203933 Msa0832150:intron 35.0%
!! AGCTCTGAATTGAACAAGAA+AGG + chr5_4:5204117-5204136 None:intergenic 35.0%
AGCTTATCCTACAGTTTCTT+AGG - chr5_4:5204133-5204152 Msa0832150:intron 35.0%
AGGAAACATGGAAACTAAAG+GGG + chr5_4:5204363-5204382 None:intergenic 35.0%
CTATAAAACTCCCTGTTGAA+AGG - chr5_4:5204682-5204701 Msa0832150:intron 35.0%
ATTGTTGAACCCTTTCAACA+GGG + chr5_4:5204695-5204714 None:intergenic 35.0%
TGTTGAAAGGGTTCAACAAT+GGG - chr5_4:5204695-5204714 Msa0832150:intron 35.0%
GCCTATAATAGACCTACAAT+TGG + chr5_4:5204726-5204745 None:intergenic 35.0%
AAATAACCACATAGTCGGTT+TGG - chr5_4:5205051-5205070 Msa0832150:intron 35.0%
CAACCTTGAAAACTAGTTCA+AGG - chr5_4:5205248-5205267 Msa0832150:CDS 35.0%
!!! ATCCCTTGAACTAGTTTTCA+AGG + chr5_4:5205254-5205273 None:intergenic 35.0%
ACACTACATATGTCTTGTCT+TGG + chr5_4:5205361-5205380 None:intergenic 35.0%
AAGACAAGACATATGTAGTG+TGG - chr5_4:5205360-5205379 Msa0832150:CDS 35.0%
!!! CGATTTTTTGACAACTGACA+TGG + chr5_4:5205516-5205535 None:intergenic 35.0%
AGTTGTCAAAAAATCGGTCA+TGG - chr5_4:5205520-5205539 Msa0832150:intron 35.0%
! CATCAAGTGTTGTTATATGG+CGG + chr5_4:5205546-5205565 None:intergenic 35.0%
! TGCCATCAAGTGTTGTTATA+TGG + chr5_4:5205549-5205568 None:intergenic 35.0%
ATGAGTTCCAAAATCTCAGA+TGG + chr5_4:5205579-5205598 None:intergenic 35.0%
CATCCATAAAACCTAGCTTA+AGG - chr5_4:5205596-5205615 Msa0832150:intron 35.0%
! ACTCCTTAAGCTAGGTTTTA+TGG + chr5_4:5205602-5205621 None:intergenic 35.0%
AAAACCTAGCTTAAGGAGTA+AGG - chr5_4:5205603-5205622 Msa0832150:intron 35.0%
TAATCCTTACTCCTTAAGCT+AGG + chr5_4:5205610-5205629 None:intergenic 35.0%
AGGATTACCCAAACCTTATA+AGG - chr5_4:5205623-5205642 Msa0832150:intron 35.0%
TGGCCAAATTAGTCCTTATA+AGG + chr5_4:5205639-5205658 None:intergenic 35.0%
AATTTGGCCATATCTCTGAA+TGG - chr5_4:5205649-5205668 Msa0832150:intron 35.0%
TGTACATTTAACATCCCAAC+TGG + chr5_4:5206111-5206130 None:intergenic 35.0%
!! TGAGAGCATAGCATTTTACT+GGG + chr5_4:5206276-5206295 None:intergenic 35.0%
!! TTGAGAGCATAGCATTTTAC+TGG + chr5_4:5206277-5206296 None:intergenic 35.0%
GATCACTGTTGTATGTACTT+AGG - chr5_4:5206310-5206329 Msa0832150:CDS 35.0%
GGACAAAGTAAACAATTCTG+TGG - chr5_4:5206420-5206439 Msa0832150:intron 35.0%
TCTTCAAAGTAAACTTAGGG+TGG - chr5_4:5206447-5206466 Msa0832150:intron 35.0%
ATGAGATGAATCAACAACAG+AGG + chr5_4:5206495-5206514 None:intergenic 35.0%
TATGACTTTACTTCGTGATG+GGG - chr5_4:5206792-5206811 Msa0832150:intron 35.0%
ATGTGATTGATGAAAGAGTC+AGG - chr5_4:5206839-5206858 Msa0832150:intron 35.0%
TCTCTTAGATGGACCAAATT+TGG + chr5_4:5206886-5206905 None:intergenic 35.0%
GAAAGAGAAGAGAATGAATG+TGG - chr5_4:5206910-5206929 Msa0832150:intron 35.0%
AAGAGAAGAGAATGAATGTG+GGG - chr5_4:5206912-5206931 Msa0832150:intron 35.0%
TAAAACTGTTTCACAGTCCA+AGG - chr5_4:5206957-5206976 Msa0832150:intron 35.0%
! TTATAGCGATTGATGGCTTA+TGG - chr5_4:5207052-5207071 Msa0832150:CDS 35.0%
ACTCTAATCTAGACCAACTT+AGG + chr5_4:5207556-5207575 None:intergenic 35.0%
! AAGTTGGTCTAGATTAGAGT+TGG - chr5_4:5207556-5207575 Msa0832150:intron 35.0%
CAGTATTCTGTAAGGAGTAA+CGG + chr5_4:5207639-5207658 None:intergenic 35.0%
TGATCAGTGAAAAACCTAAG+AGG + chr5_4:5207797-5207816 None:intergenic 35.0%
GCAAGAAGAAAGACATCTAT+TGG - chr5_4:5207908-5207927 Msa0832150:intron 35.0%
ACATTTAGATGGTAGTAGCT+TGG - chr5_4:5208030-5208049 Msa0832150:CDS 35.0%
!! GAGTCTTATTTATCCGATGT+GGG + chr5_4:5208223-5208242 None:intergenic 35.0%
!! AGAGTCTTATTTATCCGATG+TGG + chr5_4:5208224-5208243 None:intergenic 35.0%
GAGATGAGTTTATAAAGAGG+AGG - chr5_4:5208245-5208264 Msa0832150:intron 35.0%
CTAACTCATCCTTACAAAAC+CGG + chr5_4:5208289-5208308 None:intergenic 35.0%
!! TTGCGTTGGATATTTTGAAG+AGG + chr5_4:5208475-5208494 None:intergenic 35.0%
TATCAAAATCTTCGCACATG+TGG + chr5_4:5208545-5208564 None:intergenic 35.0%
! GAGTTGTTGTGTTTTACTTC+AGG - chr5_4:5208599-5208618 Msa0832150:intron 35.0%
! TGAAAAGGTGAAAGCTCTAA+TGG - chr5_4:5208629-5208648 Msa0832150:intron 35.0%
! AAGGTTTGACAGTTTTCCAT+TGG - chr5_4:5208912-5208931 Msa0832150:intron 35.0%
! ACTTTGAGCTTTTCACTTTC+AGG + chr5_4:5209080-5209099 None:intergenic 35.0%
GTATACCAAACTAAGATTGC+AGG + chr5_4:5209306-5209325 None:intergenic 35.0%
GTATACCAAACTAAGATTGC+AGG + chr5_4:5209306-5209325 None:intergenic 35.0%
!! ATGGCTTTTGAAAGCAATGA+AGG + chr5_4:5209467-5209486 None:intergenic 35.0%
CATGTGCAGAAAATTAGATC+AGG - chr5_4:5209516-5209535 Msa0832150:intron 35.0%
TTAGATCAGGAGACTAATCA+AGG - chr5_4:5209529-5209548 Msa0832150:intron 35.0%
!! ACTAATCAAGGAGTTGATAG+TGG - chr5_4:5209541-5209560 Msa0832150:intron 35.0%
!! CTTGTTATTCGTGAAAGAGA+TGG - chr5_4:5209574-5209593 Msa0832150:intron 35.0%
! TCATATTTGAGACGATGGAT+TGG - chr5_4:5209622-5209641 Msa0832150:intron 35.0%
GACAGTAGTCCAAATAATGA+AGG - chr5_4:5209673-5209692 Msa0832150:intron 35.0%
TCATAGAGGTCTCTTCAAAA+AGG + chr5_4:5209828-5209847 None:intergenic 35.0%
TGCAACTCTTAAAGAAAGCA+TGG - chr5_4:5209922-5209941 Msa0832150:intron 35.0%
! TAAAGAAAGCATGGATAGCA+TGG - chr5_4:5209931-5209950 Msa0832150:intron 35.0%
ATTCTAATCAGCTTCTAGTG+TGG - chr5_4:5210120-5210139 Msa0832150:intron 35.0%
!! GTTGTTGCTTGTGGTTATTT+TGG + chr5_4:5210224-5210243 None:intergenic 35.0%
!! TTGTGGTTTTGCTTTACACT+TGG + chr5_4:5210275-5210294 None:intergenic 35.0%
CTTGTTTAGGGGAAAAGATT+GGG + chr5_4:5210504-5210523 None:intergenic 35.0%
! TCTTGTTTAGGGGAAAAGAT+TGG + chr5_4:5210505-5210524 None:intergenic 35.0%
! ATCATTGGGTCTCTTGTTTA+GGG + chr5_4:5210516-5210535 None:intergenic 35.0%
! AATCATTGGGTCTCTTGTTT+AGG + chr5_4:5210517-5210536 None:intergenic 35.0%
AAAACAATTGGGAAACACCT+CGG + chr5_4:5210548-5210567 None:intergenic 35.0%
!!! TGGGGGTTAGATTTTAAAGT+TGG + chr5_4:5210571-5210590 None:intergenic 35.0%
AAAAGAGAAGATCCTTAGGA+TGG + chr5_4:5210602-5210621 None:intergenic 35.0%
! ATCCTAAGGATCTTCTCTTT+TGG - chr5_4:5210601-5210620 Msa0832150:intron 35.0%
AGATTCTTTGTGAGCAACTT+GGG + chr5_4:5210641-5210660 None:intergenic 35.0%
AATCTTGGAGAACCAAAAGA+GGG + chr5_4:5210729-5210748 None:intergenic 35.0%
AAGCTTCAAGATGTGAATCT+TGG + chr5_4:5210744-5210763 None:intergenic 35.0%
ACTAAAGGTTGAAGGTCTTT+GGG + chr5_4:5210776-5210795 None:intergenic 35.0%
TACTAAAGGTTGAAGGTCTT+TGG + chr5_4:5210777-5210796 None:intergenic 35.0%
ATCTCATGGAAACTAAAGGA+GGG + chr5_4:5210819-5210838 None:intergenic 35.0%
AATCTCATGGAAACTAAAGG+AGG + chr5_4:5210820-5210839 None:intergenic 35.0%
GTGAATCTCATGGAAACTAA+AGG + chr5_4:5210823-5210842 None:intergenic 35.0%
TTGTTGAGTAAGCTTGGTAA+TGG + chr5_4:5210845-5210864 None:intergenic 35.0%
TACCAAGCTTACTCAACAAA+TGG - chr5_4:5210846-5210865 Msa0832150:intron 35.0%
ACCAAGCTTACTCAACAAAT+GGG - chr5_4:5210847-5210866 Msa0832150:intron 35.0%
AAGAAATCGTAGCACGATTT+AGG + chr5_4:5210958-5210977 None:intergenic 35.0%
GTTTGCTTTGACAAAAATCG+TGG + chr5_4:5210991-5211010 None:intergenic 35.0%
! CTTCATTGATAGCACCATTA+AGG + chr5_4:5211225-5211244 None:intergenic 35.0%
!! AAACTTTTAAGGACTGCTCT+TGG - chr5_4:5211247-5211266 Msa0832150:CDS 35.0%
AACTGACCAACTAATAGGTA+AGG + chr5_4:5211278-5211297 None:intergenic 35.0%
ACTGAATTTGTCAAGTCAAG+GGG - chr5_4:5211560-5211579 Msa0832150:intron 35.0%
AATCTTTGATATGGCTGCTG+AGG - chr5_4:5203216-5203235 Msa0832150:three_prime_UTR 40.0%
! GCATTTTCAAAGATTGGAGC+AGG - chr5_4:5203490-5203509 Msa0832150:CDS 40.0%
TCTACAAGACCAACTTTCTC+AGG - chr5_4:5203565-5203584 Msa0832150:CDS 40.0%
TTCTGTAAGCCTGAGAAAGT+TGG + chr5_4:5203577-5203596 None:intergenic 40.0%
TGAAAAAGCCAAGGAAAAGG+AGG - chr5_4:5203809-5203828 Msa0832150:intron 40.0%
GCGATGTCACAACAAATACA+TGG - chr5_4:5203834-5203853 Msa0832150:intron 40.0%
! TGGGAATACCATACCTTTTG+AGG + chr5_4:5203863-5203882 None:intergenic 40.0%
CTTCTGCTTACAACAATCTG+AGG + chr5_4:5203999-5204018 None:intergenic 40.0%
CTCAGATTGTTGTAAGCAGA+AGG - chr5_4:5203997-5204016 Msa0832150:intron 40.0%
CATTGTTGAACCCTTTCAAC+AGG + chr5_4:5204696-5204715 None:intergenic 40.0%
CTGTTGAAAGGGTTCAACAA+TGG - chr5_4:5204694-5204713 Msa0832150:intron 40.0%
TTGTTGTGTGACTAGGACAT+AGG + chr5_4:5204802-5204821 None:intergenic 40.0%
!! GTTTGAGTTGTTGTGTGACT+AGG + chr5_4:5204809-5204828 None:intergenic 40.0%
GAACTCCAACCATTATGTCA+AGG + chr5_4:5204960-5204979 None:intergenic 40.0%
ACAATTGACCTCCAATGACA+TGG + chr5_4:5204986-5205005 None:intergenic 40.0%
!!! GTGTCCGAGTTTTTAGTCAA+AGG - chr5_4:5205158-5205177 Msa0832150:intron 40.0%
CTATGATACACCTTTAGGTG+TGG + chr5_4:5205190-5205209 None:intergenic 40.0%
! GTGATTGCCCAAGTCTTATA+AGG - chr5_4:5205275-5205294 Msa0832150:CDS 40.0%
GCAATGGCATGTTTATATGG+TGG + chr5_4:5205462-5205481 None:intergenic 40.0%
CCAGCAATGGCATGTTTATA+TGG + chr5_4:5205465-5205484 None:intergenic 40.0%
CCATATAAACATGCCATTGC+TGG - chr5_4:5205462-5205481 Msa0832150:intron 40.0%
CTGACATGGACAATTTGTGA+AGG + chr5_4:5205502-5205521 None:intergenic 40.0%
CGCCATATAACAACACTTGA+TGG - chr5_4:5205544-5205563 Msa0832150:intron 40.0%
TCCTACACCATTCAGAGATA+TGG + chr5_4:5205659-5205678 None:intergenic 40.0%
GGTATCGTCACATTCTTTCT+GGG + chr5_4:5206090-5206109 None:intergenic 40.0%
TGGTATCGTCACATTCTTTC+TGG + chr5_4:5206091-5206110 None:intergenic 40.0%
AAGAATGTGACGATACCAGT+TGG - chr5_4:5206093-5206112 Msa0832150:intron 40.0%
AGAATGTGACGATACCAGTT+GGG - chr5_4:5206094-5206113 Msa0832150:intron 40.0%
! ACACAAGGTGTTCCTTATTC+TGG - chr5_4:5206235-5206254 Msa0832150:intron 40.0%
CAGGATTCAGAGTTTGCAAA+TGG + chr5_4:5206683-5206702 None:intergenic 40.0%
TGATTGATGAAAGAGTCAGG+AGG - chr5_4:5206842-5206861 Msa0832150:intron 40.0%
CTCTTTCTTCGTCTCTTAGA+TGG + chr5_4:5206897-5206916 None:intergenic 40.0%
TAGTGAGCAGTTTCAAACCT+TGG + chr5_4:5206977-5206996 None:intergenic 40.0%
! AGAGCACTTATAGCGATTGA+TGG - chr5_4:5207045-5207064 Msa0832150:CDS 40.0%
CAGTCTAATAACGGTTAGGA+TGG + chr5_4:5207291-5207310 None:intergenic 40.0%
AATGTCATTGTCATGCCAAC+AGG + chr5_4:5207483-5207502 None:intergenic 40.0%
CGTTACTCCTTACAGAATAC+TGG - chr5_4:5207637-5207656 Msa0832150:intron 40.0%
GACAAGACCAGTATTCTGTA+AGG + chr5_4:5207647-5207666 None:intergenic 40.0%
!! GAATACTGGTCTTGTCTCAT+TGG - chr5_4:5207651-5207670 Msa0832150:intron 40.0%
TCATTGGCAGTAAAAGCTGA+TGG - chr5_4:5207667-5207686 Msa0832150:intron 40.0%
AGCAATGGCATTGCATGAAA+AGG - chr5_4:5207714-5207733 Msa0832150:intron 40.0%
CCTGAAGCATAAAGCAAGAT+AGG + chr5_4:5207863-5207882 None:intergenic 40.0%
CCTATCTTGCTTTATGCTTC+AGG - chr5_4:5207860-5207879 Msa0832150:intron 40.0%
TGGAAATTCCGCCTTAATTG+CGG - chr5_4:5208103-5208122 Msa0832150:CDS 40.0%
CTAACGAAAGGTCGCAATTA+AGG + chr5_4:5208143-5208162 None:intergenic 40.0%
!! GTTCTTTGTGTTGGCTTTGA+GGG - chr5_4:5208185-5208204 Msa0832150:CDS 40.0%
!! TTCTTTGTGTTGGCTTTGAG+GGG - chr5_4:5208186-5208205 Msa0832150:CDS 40.0%
!! CGGTTTTGTAAGGATGAGTT+AGG - chr5_4:5208287-5208306 Msa0832150:intron 40.0%
CAGGCATATACATATTGCGT+TGG + chr5_4:5208489-5208508 None:intergenic 40.0%
! ATGCCTGTGATTTTCGGATT+AGG - chr5_4:5208502-5208521 Msa0832150:CDS 40.0%
! TGCCTGTGATTTTCGGATTA+GGG - chr5_4:5208503-5208522 Msa0832150:CDS 40.0%
! GGTGAAAGCTCTAATGGAAT+TGG - chr5_4:5208635-5208654 Msa0832150:intron 40.0%
GCAGGAACATCAATTACTTC+TGG - chr5_4:5208668-5208687 Msa0832150:intron 40.0%
GGAAAACTGTCAAACCTTTG+AGG + chr5_4:5208910-5208929 None:intergenic 40.0%
! GTTTGACAGTTTTCCATTGG+CGG - chr5_4:5208915-5208934 Msa0832150:intron 40.0%
! ATTGCCCAACTCTTTTCTTC+AGG - chr5_4:5208941-5208960 Msa0832150:intron 40.0%
CTAGCCTGAAGAAAAGAGTT+GGG + chr5_4:5208948-5208967 None:intergenic 40.0%
GCAGGAAGAGATGAACTATA+CGG - chr5_4:5208995-5209014 Msa0832150:intron 40.0%
AAGAGATGAACTATACGGTG+TGG - chr5_4:5209000-5209019 Msa0832150:intron 40.0%
AGAGATGAACTATACGGTGT+GGG - chr5_4:5209001-5209020 Msa0832150:intron 40.0%
!! TTGGTTTGGCAAGACAATCA+AGG + chr5_4:5209149-5209168 None:intergenic 40.0%
CTCTTCCTGCAATCTTAGTT+TGG - chr5_4:5209298-5209317 Msa0832150:intron 40.0%
CTCTTCCTGCAATCTTAGTT+TGG - chr5_4:5209298-5209317 Msa0832150:intron 40.0%
! CTTTTCCACTAGCATCCAAT+GGG + chr5_4:5209648-5209667 None:intergenic 40.0%
! TCTTTTCCACTAGCATCCAA+TGG + chr5_4:5209649-5209668 None:intergenic 40.0%
ATGATACCTTCCAAAGAGAG+AGG + chr5_4:5209988-5210007 None:intergenic 40.0%
AAGTATTTGAGGGAAAGGAC+AGG - chr5_4:5210046-5210065 Msa0832150:intron 40.0%
AATGCAATCCCAACATTAGG+AGG + chr5_4:5210075-5210094 None:intergenic 40.0%
!! CTAGTGTGGTGTTGTGAATT+CGG - chr5_4:5210134-5210153 Msa0832150:intron 40.0%
! TCTGTAGTTGTTGTTGCTTG+TGG + chr5_4:5210233-5210252 None:intergenic 40.0%
AGGGGAAAAGATTGGGAAAA+AGG + chr5_4:5210497-5210516 None:intergenic 40.0%
! TCATTGGGTCTCTTGTTTAG+GGG + chr5_4:5210515-5210534 None:intergenic 40.0%
AAACAATTGGGAAACACCTC+GGG + chr5_4:5210547-5210566 None:intergenic 40.0%
! TTAGGATGGTTCTCTTTTGG+GGG + chr5_4:5210588-5210607 None:intergenic 40.0%
! CTTAGGATGGTTCTCTTTTG+GGG + chr5_4:5210589-5210608 None:intergenic 40.0%
! CCTTAGGATGGTTCTCTTTT+GGG + chr5_4:5210590-5210609 None:intergenic 40.0%
! TCCTTAGGATGGTTCTCTTT+TGG + chr5_4:5210591-5210610 None:intergenic 40.0%
GACCAAAAGAGAAGATCCTT+AGG + chr5_4:5210606-5210625 None:intergenic 40.0%
GAGATTCTTTGTGAGCAACT+TGG + chr5_4:5210642-5210661 None:intergenic 40.0%
ATCTTGGAGAACCAAAAGAG+GGG + chr5_4:5210728-5210747 None:intergenic 40.0%
GAATCTTGGAGAACCAAAAG+AGG + chr5_4:5210730-5210749 None:intergenic 40.0%
!! CTTGGTAATGGTGAATCTCA+TGG + chr5_4:5210833-5210852 None:intergenic 40.0%
! ACCCATTTGTTGAGTAAGCT+TGG + chr5_4:5210851-5210870 None:intergenic 40.0%
CTTACTCAACAAATGGGTCA+AGG - chr5_4:5210853-5210872 Msa0832150:intron 40.0%
TGTGTACTAACGTGAAATCG+TGG + chr5_4:5210916-5210935 None:intergenic 40.0%
ACAAAAATCGTGGCACAAGA+GGG + chr5_4:5210981-5211000 None:intergenic 40.0%
TTGAGTCAAAACTCAACACG+TGG - chr5_4:5211067-5211086 Msa0832150:intron 40.0%
GGTGTTTCAGAAGTCCTTAA+TGG - chr5_4:5211208-5211227 Msa0832150:intron 40.0%
GTCTCAACTGACCAACTAAT+AGG + chr5_4:5211283-5211302 None:intergenic 40.0%
! TTTTTGCTGCTCAGATGTTG+AGG - chr5_4:5211416-5211435 Msa0832150:CDS 40.0%
! TTTTGCTGCTCAGATGTTGA+GGG - chr5_4:5211417-5211436 Msa0832150:CDS 40.0%
CAACTCAACTTTCACGTTCT+TGG - chr5_4:5211702-5211721 Msa0832150:CDS 40.0%
AACATCACGCATAAAGTGCA+TGG + chr5_4:5211779-5211798 None:intergenic 40.0%
ACATACCGTGTTCCAGTTGT+CGG + chr5_4:5203285-5203304 None:intergenic 45.0%
CAGCTATGTATGCAACAAGC+TGG - chr5_4:5203437-5203456 Msa0832150:three_prime_UTR 45.0%
GTAGCGACACTAAGATAAGC+AGG + chr5_4:5203464-5203483 None:intergenic 45.0%
! TAGCTACTGCGTTTGCTGAA+AGG - chr5_4:5203684-5203703 Msa0832150:CDS 45.0%
! AGCTACTGCGTTTGCTGAAA+GGG - chr5_4:5203685-5203704 Msa0832150:CDS 45.0%
CTAACAGGCTGAAAAAGCCA+AGG - chr5_4:5203800-5203819 Msa0832150:intron 45.0%
GGCTGAAAAAGCCAAGGAAA+AGG - chr5_4:5203806-5203825 Msa0832150:intron 45.0%
AAAAGCCAAGGAAAAGGAGG+AGG - chr5_4:5203812-5203831 Msa0832150:intron 45.0%
CATGGCTTCCTCAAAAGGTA+TGG - chr5_4:5203852-5203871 Msa0832150:intron 45.0%
GAAAGGGTTCAACAATGGGT+TGG - chr5_4:5204699-5204718 Msa0832150:intron 45.0%
!! CAATGGGTTGGACCAATTGT+AGG - chr5_4:5204711-5204730 Msa0832150:intron 45.0%
GAAGGAGAGCCTTGACATAA+TGG - chr5_4:5204948-5204967 Msa0832150:intron 45.0%
GAGAGCCTTGACATAATGGT+TGG - chr5_4:5204952-5204971 Msa0832150:intron 45.0%
TGGAGTTCATGCCATGTCAT+TGG - chr5_4:5204972-5204991 Msa0832150:CDS 45.0%
AGTTCATGCCATGTCATTGG+AGG - chr5_4:5204975-5204994 Msa0832150:CDS 45.0%
AATCAGCCTCTTGCAAAGCA+AGG - chr5_4:5205017-5205036 Msa0832150:CDS 45.0%
AAGGCATACTCCACACCTAA+AGG - chr5_4:5205177-5205196 Msa0832150:intron 45.0%
GATGGCATCAGTGTTGTCAA+TGG - chr5_4:5205421-5205440 Msa0832150:CDS 45.0%
! AAACATGCCATTGCTGGCTA+TGG - chr5_4:5205468-5205487 Msa0832150:intron 45.0%
GCCATATCTCTGAATGGTGT+AGG - chr5_4:5205655-5205674 Msa0832150:intron 45.0%
AGGATCTCAACAGTGTACTC+TGG - chr5_4:5205675-5205694 Msa0832150:intron 45.0%
GGATCTCAACAGTGTACTCT+GGG - chr5_4:5205676-5205695 Msa0832150:intron 45.0%
AGTGTACTCTGGGTTTGTCA+GGG - chr5_4:5205686-5205705 Msa0832150:intron 45.0%
ACTGTAACGACAAGTAACCC+AGG + chr5_4:5205734-5205753 None:intergenic 45.0%
! ATGCCTTTTGGATGACTCTG+AGG - chr5_4:5206130-5206149 Msa0832150:intron 45.0%
ACTCCTCAGAGTCATCCAAA+AGG + chr5_4:5206136-5206155 None:intergenic 45.0%
! TGGATGACTCTGAGGAGTTA+TGG - chr5_4:5206138-5206157 Msa0832150:intron 45.0%
!! TTGAGCATGCTACTTTGACC+TGG - chr5_4:5207314-5207333 Msa0832150:intron 45.0%
!! TGAGCATGCTACTTTGACCT+GGG - chr5_4:5207315-5207334 Msa0832150:intron 45.0%
TCTTCATCATCAGATTGGGC+TGG + chr5_4:5207342-5207361 None:intergenic 45.0%
! GCAGTAAAAGCTGATGGACA+AGG - chr5_4:5207673-5207692 Msa0832150:intron 45.0%
! AGATGGTAGTAGCTTGGTGA+TGG - chr5_4:5208036-5208055 Msa0832150:CDS 45.0%
CTGCAATGAAGGCTAACGAA+AGG + chr5_4:5208155-5208174 None:intergenic 45.0%
!! CGTTCTTTGTGTTGGCTTTG+AGG - chr5_4:5208184-5208203 Msa0832150:CDS 45.0%
!! TCTTTGTGTTGGCTTTGAGG+GGG - chr5_4:5208187-5208206 Msa0832150:CDS 45.0%
!! CCTTACAAAACCGGCTTGTA+AGG + chr5_4:5208280-5208299 None:intergenic 45.0%
!! CCTTACAAGCCGGTTTTGTA+AGG - chr5_4:5208277-5208296 Msa0832150:intron 45.0%
!! GCCTGTGATTTTCGGATTAG+GGG - chr5_4:5208504-5208523 Msa0832150:CDS 45.0%
TCCCCTAATCCGAAAATCAC+AGG + chr5_4:5208508-5208527 None:intergenic 45.0%
GGAATTGGCACAATTGAAGC+AGG - chr5_4:5208650-5208669 Msa0832150:intron 45.0%
CCTAGCCTGAAGAAAAGAGT+TGG + chr5_4:5208949-5208968 None:intergenic 45.0%
! CCAACTCTTTTCTTCAGGCT+AGG - chr5_4:5208946-5208965 Msa0832150:intron 45.0%
ATAGTTCATCTCTTCCTGCG+TGG + chr5_4:5208994-5209013 None:intergenic 45.0%
ACCTAACTCACAAGTACCTG+TGG - chr5_4:5209051-5209070 Msa0832150:intron 45.0%
CCTAACTCACAAGTACCTGT+GGG - chr5_4:5209052-5209071 Msa0832150:intron 45.0%
TTTCACTTTCAGGATCCCAC+AGG + chr5_4:5209070-5209089 None:intergenic 45.0%
!! TGAAGGGAAAGGTGTTGGTT+TGG + chr5_4:5209163-5209182 None:intergenic 45.0%
AAACCAACACCTTTCCCTTC+AGG - chr5_4:5209162-5209181 Msa0832150:intron 45.0%
TATTTGAGGGAAAGGACAGG+AGG - chr5_4:5210049-5210068 Msa0832150:intron 45.0%
GGTCATTGTTGGACCAAACT+TGG + chr5_4:5210356-5210375 None:intergenic 45.0%
TCCAACAATGACCTACTCTG+CGG - chr5_4:5210363-5210382 Msa0832150:intron 45.0%
CTCGGGTGAGTGAAATCATT+GGG + chr5_4:5210530-5210549 None:intergenic 45.0%
CCCAAAAGAGAACCATCCTA+AGG - chr5_4:5210587-5210606 Msa0832150:intron 45.0%
!! CTTTTGGGGAGTGATTCATG+GGG + chr5_4:5210683-5210702 None:intergenic 45.0%
!! CCTTTTGGGGAGTGATTCAT+GGG + chr5_4:5210684-5210703 None:intergenic 45.0%
TCTTGGAGAACCAAAAGAGG+GGG + chr5_4:5210727-5210746 None:intergenic 45.0%
AAATCGTGGCACGATTTGAC+AGG + chr5_4:5210902-5210921 None:intergenic 45.0%
GACAAAAATCGTGGCACAAG+AGG + chr5_4:5210982-5211001 None:intergenic 45.0%
CTCAACACGTGGAAATACCA+CGG - chr5_4:5211078-5211097 Msa0832150:intron 45.0%
! GGTCAAGGAGTCTTTGACTT+CGG - chr5_4:5211171-5211190 Msa0832150:intron 45.0%
! AAGGAGTCTTTGACTTCGGA+AGG - chr5_4:5211175-5211194 Msa0832150:intron 45.0%
! ACTTCGGAAGGTACAGTTTC+TGG - chr5_4:5211187-5211206 Msa0832150:intron 45.0%
GCAGCTCCTTACCTATTAGT+TGG - chr5_4:5211269-5211288 Msa0832150:CDS 45.0%
TGGTCAGTTGAGACAGAAGT+CGG - chr5_4:5211289-5211308 Msa0832150:CDS 45.0%
GGTTACACTGGAGATAGTGA+GGG - chr5_4:5211310-5211329 Msa0832150:CDS 45.0%
TCTCATCACTGCATTGCTGA+TGG + chr5_4:5211348-5211367 None:intergenic 45.0%
!! ATAGACACTGTTTCTGCTGC+CGG - chr5_4:5211370-5211389 Msa0832150:CDS 45.0%
AAGCTCCACCATTTCAAACC+CGG + chr5_4:5211392-5211411 None:intergenic 45.0%
CTTCATCGAACTTCTGTACC+AGG + chr5_4:5211463-5211482 None:intergenic 45.0%
ATCACCCTGCCTGATTAATG+CGG + chr5_4:5211506-5211525 None:intergenic 45.0%
CTCAACTTTCACGTTCTTGG+AGG - chr5_4:5211705-5211724 Msa0832150:CDS 45.0%
!!! AAATATTTTAATATTCAAAA+TGG + chr5_4:5209486-5209505 None:intergenic 5.0%
!! ATTGGCTCGTATCCGACAAC+TGG - chr5_4:5203270-5203289 Msa0832150:three_prime_UTR 50.0%
CGTATCCGACAACTGGAACA+CGG - chr5_4:5203277-5203296 Msa0832150:three_prime_UTR 50.0%
GCCTCTTGCAAAGCAAGGTA+AGG - chr5_4:5205022-5205041 Msa0832150:CDS 50.0%
GCCTTACCTTGCTTTGCAAG+AGG + chr5_4:5205026-5205045 None:intergenic 50.0%
ATGACGCCAAACCGACTATG+TGG + chr5_4:5205060-5205079 None:intergenic 50.0%
GGCATCAGTGTTGTCAATGG+CGG - chr5_4:5205424-5205443 Msa0832150:intron 50.0%
! TCAGTGTTGTCAATGGCGGA+AGG - chr5_4:5205428-5205447 Msa0832150:intron 50.0%
CAGTGTACTCTGGGTTTGTC+AGG - chr5_4:5205685-5205704 Msa0832150:intron 50.0%
GTGTACTCTGGGTTTGTCAG+GGG - chr5_4:5205687-5205706 Msa0832150:intron 50.0%
TCATGCTAAGATGACGCTCC+TGG - chr5_4:5205713-5205732 Msa0832150:intron 50.0%
CATGCTAAGATGACGCTCCT+GGG - chr5_4:5205714-5205733 Msa0832150:intron 50.0%
GAGTGCATTAGAAGAGCAGC+TGG - chr5_4:5206399-5206418 Msa0832150:intron 50.0%
!! GAGCATGCTACTTTGACCTG+GGG - chr5_4:5207316-5207335 Msa0832150:intron 50.0%
GTCGCAATTAAGGCGACTAG+GGG + chr5_4:5208133-5208152 None:intergenic 50.0%
GGTCGCAATTAAGGCGACTA+GGG + chr5_4:5208134-5208153 None:intergenic 50.0%
AGGTCGCAATTAAGGCGACT+AGG + chr5_4:5208135-5208154 None:intergenic 50.0%
CAACACAAAGAACGTGCTGG+AGG + chr5_4:5208178-5208197 None:intergenic 50.0%
CTCCAGCACGTTCTTTGTGT+TGG - chr5_4:5208176-5208195 Msa0832150:CDS 50.0%
AGCCAACACAAAGAACGTGC+TGG + chr5_4:5208181-5208200 None:intergenic 50.0%
! GGGTGGATTTAGTCCCACAT+CGG - chr5_4:5208207-5208226 Msa0832150:CDS 50.0%
GCACTTCTCACCTTACAAGC+CGG - chr5_4:5208267-5208286 Msa0832150:intron 50.0%
GTTGGGCAATTTACCGCCAA+TGG + chr5_4:5208931-5208950 None:intergenic 50.0%
AGTGACAACCTAATCCACGC+AGG - chr5_4:5208977-5208996 Msa0832150:intron 50.0%
CATCTCTTCCTGCGTGGATT+AGG + chr5_4:5208988-5209007 None:intergenic 50.0%
CCCACAGGTACTTGTGAGTT+AGG + chr5_4:5209055-5209074 None:intergenic 50.0%
! ATACGGACAGAGTGCCTGAA+GGG + chr5_4:5209179-5209198 None:intergenic 50.0%
! AATACGGACAGAGTGCCTGA+AGG + chr5_4:5209180-5209199 None:intergenic 50.0%
ATTGGCCCATTGGATGCTAG+TGG - chr5_4:5209640-5209659 Msa0832150:intron 50.0%
AATCCACACTGCTGGATCTC+TGG + chr5_4:5209711-5209730 None:intergenic 50.0%
CCTTGCAAAATCCACACTGC+TGG + chr5_4:5209719-5209738 None:intergenic 50.0%
! CCAGCAGTGTGGATTTTGCA+AGG - chr5_4:5209716-5209735 Msa0832150:intron 50.0%
ATAGGCTTCGCCTCTCTCTT+TGG - chr5_4:5209975-5209994 Msa0832150:intron 50.0%
ACAGGAGGCCTCCTAATGTT+GGG - chr5_4:5210064-5210083 Msa0832150:intron 50.0%
TCCGCAGAGTAGGTCATTGT+TGG + chr5_4:5210367-5210386 None:intergenic 50.0%
GATCAATCTCTCCGCAGAGT+AGG + chr5_4:5210377-5210396 None:intergenic 50.0%
CCTCGGGTGAGTGAAATCAT+TGG + chr5_4:5210531-5210550 None:intergenic 50.0%
CCAATGATTTCACTCACCCG+AGG - chr5_4:5210528-5210547 Msa0832150:intron 50.0%
GAGCAACTTGGGTGAGTCTT+GGG + chr5_4:5210630-5210649 None:intergenic 50.0%
TGAGCAACTTGGGTGAGTCT+TGG + chr5_4:5210631-5210650 None:intergenic 50.0%
CCCATGAATCACTCCCCAAA+AGG - chr5_4:5210681-5210700 Msa0832150:intron 50.0%
!! GCCTTTTGGGGAGTGATTCA+TGG + chr5_4:5210685-5210704 None:intergenic 50.0%
AACCAAAAGAGGGGGCTCTT+GGG + chr5_4:5210719-5210738 None:intergenic 50.0%
AGGTTGAAGGTCTTTGGGTG+AGG + chr5_4:5210771-5210790 None:intergenic 50.0%
GAGACAGAAGTCGGTTACAC+TGG - chr5_4:5211298-5211317 Msa0832150:CDS 50.0%
CGGTTACACTGGAGATAGTG+AGG - chr5_4:5211309-5211328 Msa0832150:CDS 50.0%
!! TAGACACTGTTTCTGCTGCC+GGG - chr5_4:5211371-5211390 Msa0832150:CDS 50.0%
TTCTGCTGCCGGGTTTGAAA+TGG - chr5_4:5211381-5211400 Msa0832150:CDS 50.0%
TGCTCAGATGTTGAGGGACA+TGG - chr5_4:5211423-5211442 Msa0832150:CDS 50.0%
TTCTGTACCAGGAACCGTAG+TGG + chr5_4:5211452-5211471 None:intergenic 50.0%
TGCACCGCATTAATCAGGCA+GGG - chr5_4:5211499-5211518 Msa0832150:CDS 50.0%
! CATCGCCTCCTCCTTTTCCT+TGG + chr5_4:5203820-5203839 None:intergenic 55.0%
! CATGCCATTGCTGGCTATGG+CGG - chr5_4:5205471-5205490 Msa0832150:intron 55.0%
! ATGCCATTGCTGGCTATGGC+GGG - chr5_4:5205472-5205491 Msa0832150:intron 55.0%
ATACCCGCCATAGCCAGCAA+TGG + chr5_4:5205478-5205497 None:intergenic 55.0%
GCAATTAAGGCGACTAGGGG+CGG + chr5_4:5208130-5208149 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG - chr5_4:5208190-5208209 Msa0832150:CDS 55.0%
! GTGCCTGAAGGGAAAGGTGT+TGG + chr5_4:5209168-5209187 None:intergenic 55.0%
! GACAGAGTGCCTGAAGGGAA+AGG + chr5_4:5209174-5209193 None:intergenic 55.0%
!! GAGACGATGGATTGGCCCAT+TGG - chr5_4:5209630-5209649 Msa0832150:intron 55.0%
CAACCAGAGATCCAGCAGTG+TGG - chr5_4:5209705-5209724 Msa0832150:intron 55.0%
GCTTCGCCTCTCTCTTTGGA+AGG - chr5_4:5209979-5209998 Msa0832150:intron 55.0%
GACAGGAGGCCTCCTAATGT+TGG - chr5_4:5210063-5210082 Msa0832150:intron 55.0%
GGGGAGTGATTCATGGGGTT+GGG + chr5_4:5210678-5210697 None:intergenic 55.0%
TGGGGAGTGATTCATGGGGT+TGG + chr5_4:5210679-5210698 None:intergenic 55.0%
!!! GAGAGGGTTGGTGCCTTTTG+GGG + chr5_4:5210697-5210716 None:intergenic 55.0%
!!! GGAGAGGGTTGGTGCCTTTT+GGG + chr5_4:5210698-5210717 None:intergenic 55.0%
GAACCAAAAGAGGGGGCTCT+TGG + chr5_4:5210720-5210739 None:intergenic 55.0%
! TGCTGCCGGGTTTGAAATGG+TGG - chr5_4:5211384-5211403 Msa0832150:CDS 55.0%
GAGGGACATGGAAGCCACTA+CGG - chr5_4:5211435-5211454 Msa0832150:CDS 55.0%
ATGGAAGCCACTACGGTTCC+TGG - chr5_4:5211442-5211461 Msa0832150:CDS 55.0%
CTCGCTGCACCGCATTAATC+AGG - chr5_4:5211494-5211513 Msa0832150:CDS 55.0%
CTGCACCGCATTAATCAGGC+AGG - chr5_4:5211498-5211517 Msa0832150:CDS 55.0%
TGATATGGCTGCTGAGGCCG+AGG - chr5_4:5203222-5203241 Msa0832150:three_prime_UTR 60.0%
ACGCAGTAGCTACACAGCCC+TGG + chr5_4:5203676-5203695 None:intergenic 60.0%
CTAGGGGCGGACCGCAATTA+AGG + chr5_4:5208117-5208136 None:intergenic 60.0%
CGTGCTGGAGGCTGCAATGA+AGG + chr5_4:5208166-5208185 None:intergenic 60.0%
!!! GGGAGAGGGTTGGTGCCTTT+TGG + chr5_4:5210699-5210718 None:intergenic 60.0%
AAGAGGGGGCTCTTGGGAGA+GGG + chr5_4:5210713-5210732 None:intergenic 60.0%
AAAGAGGGGGCTCTTGGGAG+AGG + chr5_4:5210714-5210733 None:intergenic 60.0%
! CTCCCAAGAGCCCCCTCTTT+TGG - chr5_4:5210714-5210733 Msa0832150:intron 60.0%
!! CATCAGATTGGGCTGGCCCC+AGG + chr5_4:5207335-5207354 None:intergenic 65.0%
GGGGCGGACCGCAATTAAGG+CGG + chr5_4:5208114-5208133 None:intergenic 65.0%
GGGGGCTCTTGGGAGAGGGT+TGG + chr5_4:5210709-5210728 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 5203128 5211838 5203128 ID=Msa0832150;Name=Msa0832150
chr5_4 mRNA 5203128 5211838 5203128 ID=Msa0832150-mRNA-1;Parent=Msa0832150;Name=Msa0832150-mRNA-1;_AED=0.14;_eAED=0.14;_QI=69|1|1|1|0.85|0.86|15|358|654
chr5_4 exon 5203128 5203794 5203128 ID=Msa0832150-mRNA-1:exon:2246;Parent=Msa0832150-mRNA-1
chr5_4 exon 5204966 5205059 5204966 ID=Msa0832150-mRNA-1:exon:2245;Parent=Msa0832150-mRNA-1
chr5_4 exon 5205229 5205441 5205229 ID=Msa0832150-mRNA-1:exon:2244;Parent=Msa0832150-mRNA-1
chr5_4 exon 5206275 5206345 5206275 ID=Msa0832150-mRNA-1:exon:2243;Parent=Msa0832150-mRNA-1
chr5_4 exon 5206974 5207084 5206974 ID=Msa0832150-mRNA-1:exon:2242;Parent=Msa0832150-mRNA-1
chr5_4 exon 5207231 5207314 5207231 ID=Msa0832150-mRNA-1:exon:2241;Parent=Msa0832150-mRNA-1
chr5_4 exon 5207988 5208248 5207988 ID=Msa0832150-mRNA-1:exon:2240;Parent=Msa0832150-mRNA-1
chr5_4 exon 5208330 5208386 5208330 ID=Msa0832150-mRNA-1:exon:2239;Parent=Msa0832150-mRNA-1
chr5_4 exon 5208498 5208566 5208498 ID=Msa0832150-mRNA-1:exon:2238;Parent=Msa0832150-mRNA-1
chr5_4 exon 5208773 5208913 5208773 ID=Msa0832150-mRNA-1:exon:2237;Parent=Msa0832150-mRNA-1
chr5_4 exon 5210882 5210984 5210882 ID=Msa0832150-mRNA-1:exon:2236;Parent=Msa0832150-mRNA-1
chr5_4 exon 5211098 5211159 5211098 ID=Msa0832150-mRNA-1:exon:2235;Parent=Msa0832150-mRNA-1
chr5_4 exon 5211242 5211558 5211242 ID=Msa0832150-mRNA-1:exon:2234;Parent=Msa0832150-mRNA-1
chr5_4 exon 5211668 5211753 5211668 ID=Msa0832150-mRNA-1:exon:2233;Parent=Msa0832150-mRNA-1
chr5_4 exon 5211783 5211838 5211783 ID=Msa0832150-mRNA-1:exon:2232;Parent=Msa0832150-mRNA-1
chr5_4 five_prime_UTR 5211783 5211838 5211783 ID=Msa0832150-mRNA-1:five_prime_utr;Parent=Msa0832150-mRNA-1
chr5_4 five_prime_UTR 5211741 5211753 5211741 ID=Msa0832150-mRNA-1:five_prime_utr;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5211668 5211740 5211668 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5211242 5211558 5211242 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5211098 5211159 5211098 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5210882 5210984 5210882 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5208773 5208913 5208773 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5208498 5208566 5208498 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5208330 5208386 5208330 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5207988 5208248 5207988 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5207231 5207314 5207231 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5206974 5207084 5206974 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5206275 5206345 5206275 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5205229 5205441 5205229 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5204966 5205059 5204966 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 CDS 5203486 5203794 5203486 ID=Msa0832150-mRNA-1:cds;Parent=Msa0832150-mRNA-1
chr5_4 three_prime_UTR 5203128 5203485 5203128 ID=Msa0832150-mRNA-1:three_prime_utr;Parent=Msa0832150-mRNA-1
Gene Sequence

>Msa0832150

ATGGCTGCTGAGGCCGAGGATATGAATCATGATGATGAATCATTATTGGCTCGTATCCGACAACTGGAACACGAGCGTGATGAATTACGCAAAGATATCGAACAGCTATGTATGCAACAAGCTGGACCTGCTTATCTTAGTGTCGCTACAAGAATGCATTTTCAAAGATTGGAGCAGGAGATTCAAACCCTTCAAAATAAGTTGGCTGCTTCCACAAGAGAAACTCTTAATCTACAAGACCAACTTTCTCAGGCTTACAGAATTAAAGCTCAACTCGCAGATCTACACGCTGCCGAGCATTCAAAGAATATCGAAGCCGAGAAGCAGCTTAAATTTTTCCAGGGCTGTGTAGCTACTGCGTTTGCTGAAAGGGATCATGCAATAATTGAGGCTGAAAAAGCCAAGGAAAAGGAGGAGGCGATGTCACAACAAATACATGGCTTCCTCAAAAGGATACAAGAACTCACCTCAGATTGTTGTAAGCAGAAGGAATTTATTGATGCTCTTCAGAGTGATCAAGCAATGTATATAGACCAAAATGAAAAATTTAAGAAGGTAATTAATAAGTTCTTTCAGATCAGGCAATATTCCCAGAAAGAATGTGACGATACCAGTTGGGATGTTAAATGTACATGCCTTTTGGATGACTCTGAGGAGTTATGGAGTTTCAATGATGCTTCCACCTCTAAATACATTAGTGCATTAGAAGAGCAGCTGGACAAAGTAAACAATTCTGTGGACTGTCTTCAAAGTAAACTTAGGGTGGGTTTGGAAATTGAAAATCATCTGAAGAAGAGAATCAATTTAATGGAACAAAAACAAATTTATATGAACAAAGTGATTGAGAATGGCATAGCAGACTTAAAACATCATCATTTTAAGTATAGGGATCATATTATGACTTTACTTCGTGATGGGGAATCCACTATTAAATCCATAATCAATGTGATTGATGAAAGAGTCAGGAGGTGCAATGAGAATATTGAGCCAAATTTGGTCCATCTAAGAGACGAAGAAAGAGAAGAGAATGAATGTGGGGATGCGCACATAAGCCATCAAGATAAAACTGTTTCACAGTCCAAGAATACTGGTCTTGTCTCATTGGCAGTAAAAGCTGATGGACAAGGTGATTCATCTGATGTTTTAGCAATGGCATTGCATGAAAAGGTTGATGCATTATTGCTGTTATCACAGCAAGAAGAAAGACATCTATTGGAGAGAAATGTGAATTCAGCCCTTCAAATAAAGACTGAAGAACTTCAAAAGAACTTGTTACAGGTTACTAATGAAAAGGTGAAAGCTCTAATGGAATTGGCACAATTGAAGCAGGAACATCAATTACTTCTGGAAAAATTAGATCAGGAGACTAATCAAGGAGTTGATAGTGGAGAAAGAAAGCTTGTTATTCGTGAAAGAGATGGAACCCTAAAAAACTTGCTGAAGAAATCATATTTGAGACGATGGATTGGCCCATTGGATGCTAGTGGAAAAGAAGTTGACAGTAGTCCAAATAATGAAGGGAAGTTCTTCAACCAGAGATCCAGCAGTGTGGATTTTGCAAGAATGAAGATTGAAAATGCAACTCTTAAAGAAAGCATGGATAGCATGGAGCATTTAACTTCGTCAATTCATAGGCTTCGCCTCTCTCTTTGGAAGGTCAAGGAGTCTTTGACTTCGGAAGGTACAGTTTCTGGTGTTTCAGAAGTCCTTAATGGTGCTATCAATGAAGCAAAACTTTTAAGGACTGCTCTTGGCAGCTCCTTACCTATTAGTTGGTCAGTTGAGACAGAAGTCGGTTACACTGGAGATAGTGAGGGCGTAGACACAGTCCATCAGCAATGCAGTGATGAGAAGATAGACACTGTTTCTGCTGCCGGGTTTGAAATGGTGGAGCTTTTGATTTTTGCTGCTCAGATGTTGAGGGACATGGAAGCCACTACGGTTCCTGGTACAGAAGTTCGATGA

Protein sequence

>Msa0832150

MAAEAEDMNHDDESLLARIRQLEHERDELRKDIEQLCMQQAGPAYLSVATRMHFQRLEQEIQTLQNKLAASTRETLNLQDQLSQAYRIKAQLADLHAAEHSKNIEAEKQLKFFQGCVATAFAERDHAIIEAEKAKEKEEAMSQQIHGFLKRIQELTSDCCKQKEFIDALQSDQAMYIDQNEKFKKVINKFFQIRQYSQKECDDTSWDVKCTCLLDDSEELWSFNDASTSKYISALEEQLDKVNNSVDCLQSKLRVGLEIENHLKKRINLMEQKQIYMNKVIENGIADLKHHHFKYRDHIMTLLRDGESTIKSIINVIDERVRRCNENIEPNLVHLRDEEREENECGDAHISHQDKTVSQSKNTGLVSLAVKADGQGDSSDVLAMALHEKVDALLLLSQQEERHLLERNVNSALQIKTEELQKNLLQVTNEKVKALMELAQLKQEHQLLLEKLDQETNQGVDSGERKLVIRERDGTLKNLLKKSYLRRWIGPLDASGKEVDSSPNNEGKFFNQRSSSVDFARMKIENATLKESMDSMEHLTSSIHRLRLSLWKVKESLTSEGTVSGVSEVLNGAINEAKLLRTALGSSLPISWSVETEVGYTGDSEGVDTVHQQCSDEKIDTVSAAGFEMVELLIFAAQMLRDMEATTVPGTEVR*