Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519440 | XP_013461789.1 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519440 | sp|Q93ZG3|ACSA1_ARATH | 65.033 | 449 | 146 | 2 | 4 | 441 | 2 | 450 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519440 | A0A072V1E5 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0101510 | Msa0519440 | 0.801130 | 1.041269e-48 | -8.615850e-47 |
| Msa0251640 | Msa0519440 | 0.805913 | 1.061189e-49 | -8.615850e-47 |
| Msa0519440 | Msa0519450 | 0.997846 | 1.940842e-250 | -8.615850e-47 |
| Msa0519440 | Msa0519520 | 0.891761 | 2.956876e-74 | -8.615850e-47 |
| Msa0519440 | Msa0519630 | 0.843541 | 1.315165e-58 | -8.615850e-47 |
| Msa0519440 | Msa0519640 | 0.824888 | 6.324222e-54 | -8.615850e-47 |
| Msa0519440 | Msa0672690 | 0.823349 | 1.452729e-53 | -8.615850e-47 |
| Msa0519440 | Msa0919850 | 0.800649 | 1.305192e-48 | -8.615850e-47 |
| Msa0519440 | Msa0931520 | 0.830606 | 2.671005e-55 | -8.615850e-47 |
| Msa0519440 | Msa0967180 | 0.800451 | 1.432315e-48 | -8.615850e-47 |
| Msa0519440 | Msa0992280 | 0.801102 | 1.055015e-48 | -8.615850e-47 |
| Msa0519440 | Msa1239530 | 0.800259 | 1.567644e-48 | -8.615850e-47 |
| Msa0519440 | Msa1455680 | 0.844691 | 6.463695e-59 | -8.615850e-47 |
| Msa0519440 | Msa1455710 | 0.842963 | 1.875294e-58 | -8.615850e-47 |
| Msa0519440 | Msa1455720 | 0.822629 | 2.138867e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519440 | MtrunA17_Chr3g0134861 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519440 | AT1G27840.1 | 65.033 | 449 | 146 | 2 | 4 | 441 | 2 | 450 | 0.0 | 633 |
| Msa0519440 | AT1G27840.3 | 64.889 | 450 | 146 | 3 | 4 | 441 | 2 | 451 | 0.0 | 628 |
| Msa0519440 | AT1G19750.1 | 64.365 | 449 | 149 | 3 | 4 | 441 | 2 | 450 | 0.0 | 619 |
| Msa0519440 | AT1G27840.2 | 55.902 | 449 | 130 | 4 | 4 | 441 | 2 | 393 | 1.05e-179 | 507 |
| Msa0519440 | AT1G19750.2 | 63.664 | 333 | 110 | 3 | 120 | 441 | 1 | 333 | 2.02e-156 | 446 |
| Msa0519440 | AT2G16780.1 | 28.421 | 190 | 115 | 7 | 60 | 245 | 183 | 355 | 5.26e-11 | 64.7 |
| Msa0519440 | AT5G23430.1 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.82e-11 | 64.7 |
| Msa0519440 | AT5G23430.3 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 8.39e-11 | 64.7 |
| Msa0519440 | AT5G23430.2 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 8.39e-11 | 64.7 |
Find 120 sgRNAs with CRISPR-Local
Find 433 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTTGAAGGGAATTAA+TGG | 0.165546 | 3_4:+71499804 | None:intergenic |
| ATGCGATTAGCGAAGGAATT+TGG | 0.195129 | 3_4:+71499895 | None:intergenic |
| ACGCTGTATCTTCAGCTATT+TGG | 0.195270 | 3_4:-71499627 | Msa0519440:CDS |
| ATGTCTATACAACCTTATTT+TGG | 0.234183 | 3_4:+71493548 | None:intergenic |
| CAAAGTCTACAAGATGAAAA+AGG | 0.239317 | 3_4:+71493642 | None:intergenic |
| CTCAGTTACTCCAGCTATTC+TGG | 0.256646 | 3_4:+71493850 | None:intergenic |
| CTGCACACCAATTATAAATT+AGG | 0.259803 | 3_4:+71493800 | None:intergenic |
| ATTCAAAGATGCTCCGAATA+TGG | 0.262037 | 3_4:-71499962 | Msa0519440:exon |
| AATAAGGTTTGTTCTGGTTT+TGG | 0.263552 | 3_4:-71493747 | Msa0519440:three_prime_UTR |
| TTTGAGTCCACTTGAGTTCC+AGG | 0.269395 | 3_4:-71500099 | Msa0519440:five_prime_UTR |
| ATGATCATCATGTTAATGTT+TGG | 0.280560 | 3_4:-71499567 | Msa0519440:CDS |
| CGTCTTTGTGATATTGCTTC+TGG | 0.295957 | 3_4:-71499066 | Msa0519440:CDS |
| GTTTGTGGGATGTGTAAATA+AGG | 0.300439 | 3_4:-71493763 | Msa0519440:three_prime_UTR |
| GGATGTAATTTCTGCTTCAT+TGG | 0.303704 | 3_4:+71497877 | None:intergenic |
| AATTGGCAGGCTATCATCTA+AGG | 0.313839 | 3_4:-71497902 | Msa0519440:CDS |
| TGTGTAAATAAGGTTTGTTC+TGG | 0.317866 | 3_4:-71493753 | Msa0519440:three_prime_UTR |
| TGATCATCATGTTAATGTTT+GGG | 0.326481 | 3_4:-71499566 | Msa0519440:CDS |
| TTCTTCCATGTATCCATATT+CGG | 0.326893 | 3_4:+71499949 | None:intergenic |
| TCATCGGCAATTGACCTTGC+AGG | 0.331416 | 3_4:+71493991 | None:intergenic |
| TCTTCTTCCTCCTTCACTCC+TGG | 0.331611 | 3_4:+71500081 | None:intergenic |
| GCAGTCTTATACACCTTTCC+AGG | 0.331614 | 3_4:+71499150 | None:intergenic |
| ACAAAGGTTGTTGCTATATC+TGG | 0.335545 | 3_4:+71500016 | None:intergenic |
| ATTTGGTATCCCATTGATAC+TGG | 0.339602 | 3_4:-71499610 | Msa0519440:CDS |
| GAAAACATGTGCACAAATAA+AGG | 0.341601 | 3_4:+71493822 | None:intergenic |
| AGTGAATGGGTCTTGATTAC+CGG | 0.350685 | 3_4:-71498258 | Msa0519440:CDS |
| GCATTTGCTCATACTTTGTC+TGG | 0.353584 | 3_4:-71499042 | Msa0519440:CDS |
| GATCGTGCAACTGCTCATTA+TGG | 0.366149 | 3_4:-71497835 | Msa0519440:CDS |
| TCTGAGATTGATTTAAAACT+TGG | 0.377456 | 3_4:+71498184 | None:intergenic |
| CAGGCATTTGATATGTGGTC+TGG | 0.378935 | 3_4:-71495062 | Msa0519440:CDS |
| TGAGTTGTAGCTAATTGAAT+AGG | 0.379923 | 3_4:+71495333 | None:intergenic |
| TCCTGAGTAGAAATCATTCC+TGG | 0.383793 | 3_4:+71497856 | None:intergenic |
| GGAACTCAAGTGGACTCAAA+TGG | 0.416316 | 3_4:+71500102 | None:intergenic |
| CTTCTGTTAAATCAATTTGA+AGG | 0.421628 | 3_4:+71499794 | None:intergenic |
| TTTGGCAAAATATTAAAGAA+AGG | 0.427813 | 3_4:+71493566 | None:intergenic |
| GATGAATAAACCAGTATCAA+TGG | 0.433674 | 3_4:+71499600 | None:intergenic |
| AACATCAAAGACAGAGAATC+CGG | 0.439433 | 3_4:-71499928 | Msa0519440:CDS |
| CTGATTCAAGATTGAGATTG+TGG | 0.440434 | 3_4:-71495419 | Msa0519440:CDS |
| GAAGAAGACGACGACGACTT+TGG | 0.446834 | 3_4:-71500063 | Msa0519440:five_prime_UTR |
| AATGGTCTGCTTCAAGTGAA+TGG | 0.451347 | 3_4:-71498272 | Msa0519440:CDS |
| TTGGCAACTTTCTTCTGTAC+AGG | 0.455406 | 3_4:+71497949 | None:intergenic |
| CTGGTTTAATCAACAAGATC+AGG | 0.457234 | 3_4:-71494991 | Msa0519440:intron |
| TTATTCAGGCATTTGATATG+TGG | 0.458583 | 3_4:-71495067 | Msa0519440:intron |
| CTCCAGCTATTCTGGTCGTC+GGG | 0.460582 | 3_4:+71493858 | None:intergenic |
| CCGAGTGATTTCGACGGAGA+TGG | 0.462841 | 3_4:-71499712 | Msa0519440:CDS |
| ATGAATAAACCAGTATCAAT+GGG | 0.470303 | 3_4:+71499601 | None:intergenic |
| GGCAGTGGACATCTGCCAAT+TGG | 0.470528 | 3_4:-71497919 | Msa0519440:CDS |
| TAGCGGTTTACGACGTTCAC+CGG | 0.471610 | 3_4:-71499735 | Msa0519440:CDS |
| GAACTCAAGTGGACTCAAAT+GGG | 0.479222 | 3_4:+71500103 | None:intergenic |
| CTTCAAATTGATTTAACAGA+AGG | 0.481429 | 3_4:-71499793 | Msa0519440:CDS |
| ACGATAGACAAATTCTTGTA+TGG | 0.484547 | 3_4:-71494017 | Msa0519440:CDS |
| TTCTGTTAAATCAATTTGAA+GGG | 0.489653 | 3_4:+71499795 | None:intergenic |
| AAGAAAGTTGCCAATGGAAG+TGG | 0.491768 | 3_4:-71497940 | Msa0519440:CDS |
| GTTGCCAATGGAAGTGGCAG+TGG | 0.492604 | 3_4:-71497934 | Msa0519440:CDS |
| AATCAATCTCAGACGCAGCT+TGG | 0.494603 | 3_4:-71498174 | Msa0519440:CDS |
| ATCCCGACGACCAGAATAGC+TGG | 0.496379 | 3_4:-71493860 | Msa0519440:CDS |
| GACGACGACGACTTTGGTTG+TGG | 0.498634 | 3_4:-71500057 | Msa0519440:five_prime_UTR |
| GCTCATTATGGTGCTGTGAC+AGG | 0.504885 | 3_4:-71497823 | Msa0519440:CDS |
| AACATGATGATCATAAGAAC+CGG | 0.508996 | 3_4:+71499576 | None:intergenic |
| TTAGATGATAGCCTGCCAAT+TGG | 0.511047 | 3_4:+71497904 | None:intergenic |
| GTGGACATCTGCCAATTGGC+AGG | 0.512661 | 3_4:-71497915 | Msa0519440:CDS |
| ATGGTCTGCTTCAAGTGAAT+GGG | 0.514760 | 3_4:-71498271 | Msa0519440:CDS |
| AGGCATTTGATATGTGGTCT+GGG | 0.514949 | 3_4:-71495061 | Msa0519440:CDS |
| AGATTGTGGGATGTTGAGTC+AGG | 0.515425 | 3_4:-71495405 | Msa0519440:CDS |
| GTGGTGAATTTCAAAATGCC+TGG | 0.516745 | 3_4:-71499168 | Msa0519440:CDS |
| GATACTGGTTTATTCATCAC+CGG | 0.517438 | 3_4:-71499595 | Msa0519440:CDS |
| AAGGTCAATTGCCGATGAAA+TGG | 0.525899 | 3_4:-71493986 | Msa0519440:intron |
| GTGAATGGGTCTTGATTACC+GGG | 0.526216 | 3_4:-71498257 | Msa0519440:CDS |
| ATCTTGTTGATTAAACCAGC+AGG | 0.528118 | 3_4:+71494995 | None:intergenic |
| AAATAGGTGCACCATTTCAT+CGG | 0.529434 | 3_4:+71493975 | None:intergenic |
| CACTTGAGTTCCAGGAGTGA+AGG | 0.532137 | 3_4:-71500091 | Msa0519440:five_prime_UTR |
| TTCTTGTATGGTCGCCTGCA+AGG | 0.534246 | 3_4:-71494005 | Msa0519440:CDS |
| TCCAGGAATGATTTCTACTC+AGG | 0.535159 | 3_4:-71497857 | Msa0519440:CDS |
| ATGAGTCTATAAACTCCTGC+TGG | 0.535705 | 3_4:-71495010 | Msa0519440:CDS |
| ATGTCCACTGCCACTTCCAT+TGG | 0.540411 | 3_4:+71497930 | None:intergenic |
| CTCCGTCGAAATCACTCGGC+CGG | 0.540498 | 3_4:+71499716 | None:intergenic |
| TCAATTTCAATCAGTAACAA+AGG | 0.543759 | 3_4:+71500000 | None:intergenic |
| TCTCATACACTTATTGCTGC+AGG | 0.544585 | 3_4:-71499108 | Msa0519440:CDS |
| ACTTTCACAACCCTCATGCA+TGG | 0.546812 | 3_4:+71495288 | None:intergenic |
| GGCATGTATCTCTTAAGTGC+AGG | 0.549168 | 3_4:-71497781 | Msa0519440:intron |
| AATTAATGGCACCTTTGTGA+GGG | 0.550485 | 3_4:+71499818 | None:intergenic |
| AGCACGGAACGTTTGAGTAG+AGG | 0.550967 | 3_4:+71498141 | None:intergenic |
| ACTCCAGCTATTCTGGTCGT+CGG | 0.553340 | 3_4:+71493857 | None:intergenic |
| TCTGGTGAGTGGTGATACTA+CGG | 0.566490 | 3_4:+71500034 | None:intergenic |
| GAATTAATGGCACCTTTGTG+AGG | 0.566662 | 3_4:+71499817 | None:intergenic |
| AATTCTACCTACAAAAGCAA+TGG | 0.569998 | 3_4:+71493672 | None:intergenic |
| ATGCTCCGAATATGGATACA+TGG | 0.573122 | 3_4:-71499954 | Msa0519440:exon |
| TGATTCAAGATTGAGATTGT+GGG | 0.573902 | 3_4:-71495418 | Msa0519440:CDS |
| TTGAGTTCCAGGAGTGAAGG+AGG | 0.574002 | 3_4:-71500088 | Msa0519440:five_prime_UTR |
| TAGGTTTGCTTGTTTGCAAG+CGG | 0.575957 | 3_4:+71495352 | None:intergenic |
| CTTCACTCCTGGAACTCAAG+TGG | 0.579327 | 3_4:+71500092 | None:intergenic |
| CCATCTCCGTCGAAATCACT+CGG | 0.585946 | 3_4:+71499712 | None:intergenic |
| TGTGATAAACTGCAGGGCGA+AGG | 0.586427 | 3_4:-71493885 | Msa0519440:intron |
| CTGTCATAGGAGTTGTACAC+AGG | 0.588460 | 3_4:-71494045 | Msa0519440:intron |
| ATGAAGCAGAAATTACATCC+AGG | 0.589532 | 3_4:-71497874 | Msa0519440:CDS |
| TATTGCACCATCACAACCCC+CGG | 0.594673 | 3_4:+71498239 | None:intergenic |
| AAGAGCAGAATTCTACGAAG+TGG | 0.600991 | 3_4:-71500136 | Msa0519440:five_prime_UTR |
| GGATTGAAAGTAACAGAGGA+TGG | 0.605564 | 3_4:-71497802 | Msa0519440:CDS |
| ATGGTGTAATGACCGTTGAA+TGG | 0.619386 | 3_4:-71498290 | Msa0519440:CDS |
| ATTAATGGCACCTTTGTGAG+GGG | 0.625225 | 3_4:+71499819 | None:intergenic |
| TCATAGGAGTTGTACACAGG+TGG | 0.630134 | 3_4:-71494042 | Msa0519440:intron |
| GTGAACGTCGTAAACCGCTA+CGG | 0.633953 | 3_4:+71499738 | None:intergenic |
| GTACAGAAGAAAGTTGCCAA+TGG | 0.635528 | 3_4:-71497946 | Msa0519440:CDS |
| GAATGGGTCTTGATTACCGG+GGG | 0.639598 | 3_4:-71498255 | Msa0519440:CDS |
| GAATTTCAAAATGCCTGGAA+AGG | 0.640053 | 3_4:-71499163 | Msa0519440:CDS |
| CAAACGTTCCGTGCTAACCA+AGG | 0.640720 | 3_4:-71498133 | Msa0519440:intron |
| ACTTATTGCTGCAGGAACTG+AGG | 0.640922 | 3_4:-71499100 | Msa0519440:CDS |
| ATTGGCAGGCTATCATCTAA+GGG | 0.645229 | 3_4:-71497901 | Msa0519440:CDS |
| TTGGGACACTAACACCACTC+AGG | 0.656420 | 3_4:-71499548 | Msa0519440:intron |
| TGCATCAGATGCATCCGTAG+CGG | 0.664028 | 3_4:-71499752 | Msa0519440:CDS |
| CATACTTTGTCTGGTCATCG+TGG | 0.668716 | 3_4:-71499033 | Msa0519440:intron |
| GGAGCAGCTGTGAAACACGT+AGG | 0.678028 | 3_4:-71493726 | Msa0519440:three_prime_UTR |
| GACAGGATTGAAAGTAACAG+AGG | 0.681612 | 3_4:-71497806 | Msa0519440:CDS |
| ACTTGAAGCAGACCATTCAA+CGG | 0.681684 | 3_4:+71498278 | None:intergenic |
| ACGGAACGTTTGAGTAGAGG+TGG | 0.681954 | 3_4:+71498144 | None:intergenic |
| CACCGGCCGAGTGATTTCGA+CGG | 0.688986 | 3_4:-71499718 | Msa0519440:CDS |
| GAACTCGTTTCCCCTCACAA+AGG | 0.705864 | 3_4:-71499829 | Msa0519440:CDS |
| TTGTTGCTATATCTGGTGAG+TGG | 0.725606 | 3_4:+71500023 | None:intergenic |
| TGAATGGGTCTTGATTACCG+GGG | 0.746792 | 3_4:-71498256 | Msa0519440:CDS |
| AACGCACGTACGATACTACG+TGG | 0.751494 | 3_4:-71495038 | Msa0519440:CDS |
| AGGATTGAAGAGAACCTGAG+TGG | 0.792869 | 3_4:+71499534 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTAGAATAAACTA+CGG | + | chr3_4:71494197-71494216 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAACCT+TGG | + | chr3_4:71495488-71495507 | None:intergenic | 10.0% |
| !! | TCAATGAATATTATATTATT+TGG | + | chr3_4:71496879-71496898 | None:intergenic | 10.0% |
| !! | TAGAAATGATTATACATATT+TGG | - | chr3_4:71494143-71494162 | Msa0519440:intron | 15.0% |
| !!! | TATACTATTCTAAAAACTTT+GGG | + | chr3_4:71494855-71494874 | None:intergenic | 15.0% |
| !!! | TATTATATGCATGAATTTTT+TGG | - | chr3_4:71495123-71495142 | Msa0519440:intron | 15.0% |
| !! | GAATTCAGAATTATTAAATT+AGG | - | chr3_4:71496246-71496265 | Msa0519440:intron | 15.0% |
| !!! | AAATGTTCTATATTTTTTAG+AGG | - | chr3_4:71496735-71496754 | Msa0519440:intron | 15.0% |
| !! | ATATATACAATTTGAGAAAA+AGG | - | chr3_4:71496851-71496870 | Msa0519440:intron | 15.0% |
| !!! | GGTTAAATCTTATTTATATA+GGG | + | chr3_4:71497814-71497833 | None:intergenic | 15.0% |
| !!! | AGGTTAAATCTTATTTATAT+AGG | + | chr3_4:71497815-71497834 | None:intergenic | 15.0% |
| !! | ATTTGTAATTAATACTTATC+TGG | - | chr3_4:71497855-71497874 | Msa0519440:CDS | 15.0% |
| !! | TAAAATGTAAACAAGAAAAA+GGG | + | chr3_4:71498811-71498830 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAACAAGAAAA+AGG | + | chr3_4:71498812-71498831 | None:intergenic | 15.0% |
| !! | CATTAAAAATGATTATAGAA+CGG | + | chr3_4:71499003-71499022 | None:intergenic | 15.0% |
| !!! | TCTATAATCATTTTTAATGA+TGG | - | chr3_4:71499004-71499023 | Msa0519440:intron | 15.0% |
| !!! | ATTATCTTTTTATATATGCA+TGG | - | chr3_4:71499665-71499684 | Msa0519440:CDS | 15.0% |
| !!! | ATGTTTTCCTAATTTATAAT+TGG | - | chr3_4:71499794-71499813 | Msa0519440:CDS | 15.0% |
| !!! | TTTCCTTTAATTTATTTTTC+AGG | - | chr3_4:71500005-71500024 | Msa0519440:five_prime_UTR | 15.0% |
| !!! | TTCCTTTAATTTATTTTTCA+GGG | - | chr3_4:71500006-71500025 | Msa0519440:five_prime_UTR | 15.0% |
| !!! | TTTAATATTTTGCCAAAATA+AGG | - | chr3_4:71500041-71500060 | Msa0519440:five_prime_UTR | 15.0% |
| !! | TTCTGTTAAATCAATTTGAA+GGG | + | chr3_4:71493809-71493828 | None:intergenic | 20.0% |
| !! | TAGTTAGAAACAATATTACA+AGG | - | chr3_4:71494282-71494301 | Msa0519440:intron | 20.0% |
| !! | TACTATTGTAAATTGATTGT+AGG | - | chr3_4:71494408-71494427 | Msa0519440:intron | 20.0% |
| !!! | ATACTATTCTAAAAACTTTG+GGG | + | chr3_4:71494854-71494873 | None:intergenic | 20.0% |
| !!! | GTATACTATTCTAAAAACTT+TGG | + | chr3_4:71494856-71494875 | None:intergenic | 20.0% |
| !! | TAACTTAAATGCAAGTATTT+AGG | - | chr3_4:71495575-71495594 | Msa0519440:intron | 20.0% |
| !! | TATTAAATTAGGAACCTTAT+TGG | - | chr3_4:71496257-71496276 | Msa0519440:intron | 20.0% |
| !!! | TCTTTTGTTTCTCTTTAATT+CGG | - | chr3_4:71496383-71496402 | Msa0519440:intron | 20.0% |
| !! | AAGAAATGTGAAAAAAACAA+AGG | + | chr3_4:71496433-71496452 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | - | chr3_4:71496556-71496575 | Msa0519440:intron | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | - | chr3_4:71496557-71496576 | Msa0519440:intron | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | chr3_4:71496558-71496577 | Msa0519440:intron | 20.0% |
| !! | AATTTACAATAAACGACATT+TGG | + | chr3_4:71496788-71496807 | None:intergenic | 20.0% |
| !! | ATTGTTAACAATGAAAAAAC+AGG | + | chr3_4:71496984-71497003 | None:intergenic | 20.0% |
| !!! | TCAATTAGTTTATTTCCAAT+CGG | - | chr3_4:71497533-71497552 | Msa0519440:intron | 20.0% |
| !! | TCTTCTTTATATATCTCATT+TGG | + | chr3_4:71497720-71497739 | None:intergenic | 20.0% |
| !!! | TAATTTCTAAGAATACAATG+AGG | - | chr3_4:71498490-71498509 | Msa0519440:intron | 20.0% |
| !! | AAAATGTAAACAAGAAAAAG+GGG | + | chr3_4:71498810-71498829 | None:intergenic | 20.0% |
| !! | GGAATAAATTATGAGTTTAA+TGG | + | chr3_4:71499346-71499365 | None:intergenic | 20.0% |
| !! | TTAAACTCATAATTTATTCC+AGG | - | chr3_4:71499346-71499365 | Msa0519440:intron | 20.0% |
| !!! | TTAAAAAGTACATGAAGTTT+AGG | + | chr3_4:71499521-71499540 | None:intergenic | 20.0% |
| !! | CTCAATAAATTGTTTCAAAT+AGG | + | chr3_4:71499645-71499664 | None:intergenic | 20.0% |
| !!! | TCCTTTAATTTATTTTTCAG+GGG | - | chr3_4:71500007-71500026 | Msa0519440:five_prime_UTR | 20.0% |
| !! | TTTGGCAAAATATTAAAGAA+AGG | + | chr3_4:71500038-71500057 | None:intergenic | 20.0% |
| !! | AGAGCAACAAAAAAAAAAAA+AGG | + | chr3_4:71500139-71500158 | None:intergenic | 20.0% |
| ! | TCAATTTCAATCAGTAACAA+AGG | + | chr3_4:71493604-71493623 | None:intergenic | 25.0% |
| ! | ATCAATTTGAAGGGAATTAA+TGG | + | chr3_4:71493800-71493819 | None:intergenic | 25.0% |
| ! | CTTCTGTTAAATCAATTTGA+AGG | + | chr3_4:71493810-71493829 | None:intergenic | 25.0% |
| !! | CTTCAAATTGATTTAACAGA+AGG | - | chr3_4:71493808-71493827 | Msa0519440:three_prime_UTR | 25.0% |
| ! | ATGAATAAACCAGTATCAAT+GGG | + | chr3_4:71494003-71494022 | None:intergenic | 25.0% |
| ! | ATGATCATCATGTTAATGTT+TGG | - | chr3_4:71494034-71494053 | Msa0519440:CDS | 25.0% |
| ! | TGATCATCATGTTAATGTTT+GGG | - | chr3_4:71494035-71494054 | Msa0519440:CDS | 25.0% |
| ! | TATTGTAAATTGATTGTAGG+TGG | - | chr3_4:71494411-71494430 | Msa0519440:intron | 25.0% |
| ! | ACAAGGGAAAAAAAAAATAG+TGG | - | chr3_4:71494726-71494745 | Msa0519440:intron | 25.0% |
| ! | CAAGGGAAAAAAAAAATAGT+GGG | - | chr3_4:71494727-71494746 | Msa0519440:intron | 25.0% |
| ! | CTACTATCTATCAAAAGAAA+AGG | + | chr3_4:71494794-71494813 | None:intergenic | 25.0% |
| !! | TACTATTCTAAAAACTTTGG+GGG | + | chr3_4:71494853-71494872 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCACCAGAATTAA+GGG | + | chr3_4:71495044-71495063 | None:intergenic | 25.0% |
| ! | TGATGTTATGTATTATCGAA+AGG | - | chr3_4:71495254-71495273 | Msa0519440:intron | 25.0% |
| !! | ATGATTTCTTTTATGTCAGA+TGG | - | chr3_4:71495292-71495311 | Msa0519440:CDS | 25.0% |
| !! | TCTGAGATTGATTTAAAACT+TGG | + | chr3_4:71495420-71495439 | None:intergenic | 25.0% |
| !! | TTGCATTTAAGTTAAGTACT+TGG | + | chr3_4:71495569-71495588 | None:intergenic | 25.0% |
| !! | TTTTTGTATTTGATTCCTGT+GGG | + | chr3_4:71495627-71495646 | None:intergenic | 25.0% |
| !! | ATTTTTGTATTTGATTCCTG+TGG | + | chr3_4:71495628-71495647 | None:intergenic | 25.0% |
| !!! | AATGTCTAACATTTTTGGAT+TGG | + | chr3_4:71495976-71495995 | None:intergenic | 25.0% |
| ! | CCAAAAATGTTAGACATTAA+CGG | - | chr3_4:71495978-71495997 | Msa0519440:intron | 25.0% |
| !!! | TGCAGTAATTTGTATTGATT+AGG | - | chr3_4:71496158-71496177 | Msa0519440:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | chr3_4:71496163-71496182 | Msa0519440:intron | 25.0% |
| !!! | GCCTTATTTATACAAACTAA+GGG | + | chr3_4:71496205-71496224 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAAGGCCATT+TGG | - | chr3_4:71496209-71496228 | Msa0519440:intron | 25.0% |
| !!! | CTTTTGTTTCTCTTTAATTC+GGG | - | chr3_4:71496384-71496403 | Msa0519440:intron | 25.0% |
| ! | AAATGTGAAAAAAACAAAGG+AGG | + | chr3_4:71496430-71496449 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr3_4:71496604-71496623 | Msa0519440:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr3_4:71496605-71496624 | Msa0519440:intron | 25.0% |
| ! | GGACAAAAATAAAGTCAAAT+AGG | - | chr3_4:71496640-71496659 | Msa0519440:intron | 25.0% |
| ! | ACTGAAAAAAGATAAGACAT+CGG | - | chr3_4:71496909-71496928 | Msa0519440:intron | 25.0% |
| ! | TTAGAATATTCATTGTACAG+AGG | + | chr3_4:71497333-71497352 | None:intergenic | 25.0% |
| !!! | GGTTTGTTTTGAGAATTTAT+TGG | + | chr3_4:71497359-71497378 | None:intergenic | 25.0% |
| ! | AACTAATTATACTGAGCAAA+AGG | + | chr3_4:71497413-71497432 | None:intergenic | 25.0% |
| !! | TTTCCAGGTTAAAGTTTTTA+GGG | + | chr3_4:71497492-71497511 | None:intergenic | 25.0% |
| ! | AGAAAAATAGAATACAGTAG+AGG | - | chr3_4:71497667-71497686 | Msa0519440:intron | 25.0% |
| ! | GGGATATACATCTATATATA+AGG | + | chr3_4:71497794-71497813 | None:intergenic | 25.0% |
| !!! | GTTTTGCTTTTGTTAAGTAT+AGG | + | chr3_4:71497835-71497854 | None:intergenic | 25.0% |
| !!! | TATTTTGATTGTATTTGTGC+AGG | + | chr3_4:71498382-71498401 | None:intergenic | 25.0% |
| ! | CTTAGAAATTAGTTACTTAG+TGG | + | chr3_4:71498481-71498500 | None:intergenic | 25.0% |
| ! | CAAAACAGTGAAATTAGAAT+GGG | + | chr3_4:71498838-71498857 | None:intergenic | 25.0% |
| ! | ACAAAACAGTGAAATTAGAA+TGG | + | chr3_4:71498839-71498858 | None:intergenic | 25.0% |
| !!! | CTGTTTTGTTCAAATGAAAA+TGG | - | chr3_4:71498850-71498869 | Msa0519440:intron | 25.0% |
| !!! | GGTCTTTTTTCTTCTTTTAT+TGG | - | chr3_4:71498924-71498943 | Msa0519440:intron | 25.0% |
| !!! | ATTTTAGAAAATCCTCATTC+AGG | + | chr3_4:71498976-71498995 | None:intergenic | 25.0% |
| ! | CATTAATATGAATGACTTCT+CGG | + | chr3_4:71499164-71499183 | None:intergenic | 25.0% |
| ! | CATGAAAATATTTCCTCTTA+GGG | + | chr3_4:71499214-71499233 | None:intergenic | 25.0% |
| ! | ACATGAAAATATTTCCTCTT+AGG | + | chr3_4:71499215-71499234 | None:intergenic | 25.0% |
| ! | ACTTTAATGGCTATTCTTAT+TGG | + | chr3_4:71499251-71499270 | None:intergenic | 25.0% |
| ! | ATAAGAATAGCCATTAAAGT+AGG | - | chr3_4:71499251-71499270 | Msa0519440:intron | 25.0% |
| ! | TTAAATTGAGATCCATATCT+GGG | + | chr3_4:71499403-71499422 | None:intergenic | 25.0% |
| !!! | ATTTTGTTATTGTCTGTCAT+AGG | - | chr3_4:71499543-71499562 | Msa0519440:intron | 25.0% |
| !! | TTTGTATTTTGCATGTTTGT+GGG | - | chr3_4:71499824-71499843 | Msa0519440:CDS | 25.0% |
| ! | AAAGTCTACAAGATGAAAAA+GGG | + | chr3_4:71499961-71499980 | None:intergenic | 25.0% |
| ! | TCCCCTGAAAAATAAATTAA+AGG | + | chr3_4:71500011-71500030 | None:intergenic | 25.0% |
| !!! | ATGTCTATACAACCTTATTT+TGG | + | chr3_4:71500056-71500075 | None:intergenic | 25.0% |
| !!! | TATGCATACACCTTTTTTTT+GGG | + | chr3_4:71500087-71500106 | None:intergenic | 25.0% |
| !!! | ATATGCATACACCTTTTTTT+TGG | + | chr3_4:71500088-71500107 | None:intergenic | 25.0% |
| TTCTTCCATGTATCCATATT+CGG | + | chr3_4:71493655-71493674 | None:intergenic | 30.0% | |
| GATGAATAAACCAGTATCAA+TGG | + | chr3_4:71494004-71494023 | None:intergenic | 30.0% | |
| AACATGATGATCATAAGAAC+CGG | + | chr3_4:71494028-71494047 | None:intergenic | 30.0% | |
| ! | GTGATAGTGTGTATATGTTT+GGG | - | chr3_4:71494099-71494118 | Msa0519440:intron | 30.0% |
| ACAATAGTACAACACAACAA+AGG | + | chr3_4:71494397-71494416 | None:intergenic | 30.0% | |
| CTATTCTATTTGACAAGAGA+TGG | - | chr3_4:71494643-71494662 | Msa0519440:intron | 30.0% | |
| ! | CTTTTGATAGATAGTAGTAG+CGG | - | chr3_4:71494797-71494816 | Msa0519440:intron | 30.0% |
| ! | ACTATTCTAAAAACTTTGGG+GGG | + | chr3_4:71494852-71494871 | None:intergenic | 30.0% |
| !!! | TTATTTTTTATCCTTGCACG+AGG | + | chr3_4:71494991-71495010 | None:intergenic | 30.0% |
| ! | TTGTTTTCACCAGAATTAAG+GGG | + | chr3_4:71495043-71495062 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTCACCAGAATTA+AGG | + | chr3_4:71495045-71495064 | None:intergenic | 30.0% |
| CTTAATTCTGGTGAAAACAA+AGG | - | chr3_4:71495043-71495062 | Msa0519440:CDS | 30.0% | |
| !! | TATGTTAAGCATTGGATGTT+TGG | + | chr3_4:71495084-71495103 | None:intergenic | 30.0% |
| ACATCCAATGCTTAACATAA+TGG | - | chr3_4:71495085-71495104 | Msa0519440:intron | 30.0% | |
| GCTTGACATATTTCATAAGT+GGG | + | chr3_4:71495149-71495168 | None:intergenic | 30.0% | |
| AGCTTGACATATTTCATAAG+TGG | + | chr3_4:71495150-71495169 | None:intergenic | 30.0% | |
| TGTTATGTATTATCGAAAGG+AGG | - | chr3_4:71495257-71495276 | Msa0519440:intron | 30.0% | |
| AAAAAAAACCTTGGTTAGCA+CGG | + | chr3_4:71495479-71495498 | None:intergenic | 30.0% | |
| ! | CCGTTAATGTCTAACATTTT+TGG | + | chr3_4:71495981-71496000 | None:intergenic | 30.0% |
| !! | ATGCAGTATTTGTGTTGATT+AGG | - | chr3_4:71496118-71496137 | Msa0519440:intron | 30.0% |
| !! | GCCCTTAGTTTGTATAAATA+AGG | - | chr3_4:71496201-71496220 | Msa0519440:intron | 30.0% |
| !! | GGCCTTATTTATACAAACTA+AGG | + | chr3_4:71496206-71496225 | None:intergenic | 30.0% |
| !!! | ATTAGGAACCTTATTGGTTT+TGG | - | chr3_4:71496263-71496282 | Msa0519440:intron | 30.0% |
| !!! | TTAGGAACCTTATTGGTTTT+GGG | - | chr3_4:71496264-71496283 | Msa0519440:intron | 30.0% |
| CATGCAAACAAATGACAATT+TGG | + | chr3_4:71496506-71496525 | None:intergenic | 30.0% | |
| ! | TATTAATTAGGGGTATGTTC+AGG | - | chr3_4:71496568-71496587 | Msa0519440:intron | 30.0% |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr3_4:71496606-71496625 | Msa0519440:intron | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr3_4:71496618-71496637 | Msa0519440:intron | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr3_4:71496619-71496638 | Msa0519440:intron | 30.0% | |
| TCAAATAGGTGCTTAGATAT+GGG | - | chr3_4:71496654-71496673 | Msa0519440:intron | 30.0% | |
| TATTTGAGAGCAATTTGTCA+TGG | + | chr3_4:71497055-71497074 | None:intergenic | 30.0% | |
| ! | TGCTCTCAAATATTTTCACA+AGG | - | chr3_4:71497063-71497082 | Msa0519440:intron | 30.0% |
| GTGTCAGTTATATAAAGCAA+AGG | + | chr3_4:71497155-71497174 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr3_4:71497199-71497218 | None:intergenic | 30.0% | |
| AAACCACAAGACATAAAGTA+TGG | - | chr3_4:71497374-71497393 | Msa0519440:intron | 30.0% | |
| AGAGAAGAGATTTCAACTTT+CGG | + | chr3_4:71497442-71497461 | None:intergenic | 30.0% | |
| ! | GTTTCCAGGTTAAAGTTTTT+AGG | + | chr3_4:71497493-71497512 | None:intergenic | 30.0% |
| TAGAAGAGAAGAAATACATC+AGG | - | chr3_4:71497619-71497638 | Msa0519440:intron | 30.0% | |
| AGAAGAGAAGAAATACATCA+GGG | - | chr3_4:71497620-71497639 | Msa0519440:intron | 30.0% | |
| TTGATGCATTACAAGAAAAC+AGG | + | chr3_4:71498101-71498120 | None:intergenic | 30.0% | |
| TGATTCAAGATTGAGATTGT+GGG | - | chr3_4:71498183-71498202 | Msa0519440:CDS | 30.0% | |
| TGAGTTGTAGCTAATTGAAT+AGG | + | chr3_4:71498271-71498290 | None:intergenic | 30.0% | |
| !!! | TTTCTTTTGAAGCATCAAAG+AGG | - | chr3_4:71498404-71498423 | Msa0519440:intron | 30.0% |
| AATCAAATATAAAGTGCACG+AGG | - | chr3_4:71498428-71498447 | Msa0519440:intron | 30.0% | |
| ATCAAATATAAAGTGCACGA+GGG | - | chr3_4:71498429-71498448 | Msa0519440:intron | 30.0% | |
| TTAGTTACTTAGTGGTTGAT+GGG | + | chr3_4:71498473-71498492 | None:intergenic | 30.0% | |
| ATTAGTTACTTAGTGGTTGA+TGG | + | chr3_4:71498474-71498493 | None:intergenic | 30.0% | |
| ATCTCACTTCTTGATTATTC+AGG | - | chr3_4:71498520-71498539 | Msa0519440:intron | 30.0% | |
| TTATTCAGGCATTTGATATG+TGG | - | chr3_4:71498534-71498553 | Msa0519440:intron | 30.0% | |
| AACTCATCATCTTACTATGT+AGG | + | chr3_4:71499277-71499296 | None:intergenic | 30.0% | |
| ! | GTAAAACTATTTTACACCGT+CGG | - | chr3_4:71499313-71499332 | Msa0519440:intron | 30.0% |
| TAAATTGAGATCCATATCTG+GGG | + | chr3_4:71499402-71499421 | None:intergenic | 30.0% | |
| CTTAAATTGAGATCCATATC+TGG | + | chr3_4:71499404-71499423 | None:intergenic | 30.0% | |
| ATATCATTCTCCAATCCTAT+TGG | - | chr3_4:71499449-71499468 | Msa0519440:intron | 30.0% | |
| ATACTTCAATCCAATAGGAT+TGG | + | chr3_4:71499462-71499481 | None:intergenic | 30.0% | |
| GTTCAATACTTCAATCCAAT+AGG | + | chr3_4:71499467-71499486 | None:intergenic | 30.0% | |
| ACGATAGACAAATTCTTGTA+TGG | - | chr3_4:71499584-71499603 | Msa0519440:CDS | 30.0% | |
| GAAAACATGTGCACAAATAA+AGG | + | chr3_4:71499782-71499801 | None:intergenic | 30.0% | |
| CTGCACACCAATTATAAATT+AGG | + | chr3_4:71499804-71499823 | None:intergenic | 30.0% | |
| ! | GTTTGTATTTTGCATGTTTG+TGG | - | chr3_4:71499823-71499842 | Msa0519440:CDS | 30.0% |
| ! | TGTGTAAATAAGGTTTGTTC+TGG | - | chr3_4:71499848-71499867 | Msa0519440:CDS | 30.0% |
| !!! | AATAAGGTTTGTTCTGGTTT+TGG | - | chr3_4:71499854-71499873 | Msa0519440:CDS | 30.0% |
| AATTCTACCTACAAAAGCAA+TGG | + | chr3_4:71499932-71499951 | None:intergenic | 30.0% | |
| CAAAGTCTACAAGATGAAAA+AGG | + | chr3_4:71499962-71499981 | None:intergenic | 30.0% | |
| !! | CTTTTTCATCTTGTAGACTT+TGG | - | chr3_4:71499960-71499979 | Msa0519440:exon | 30.0% |
| ATTGTCTGTACCCAAAAAAA+AGG | - | chr3_4:71500074-71500093 | Msa0519440:five_prime_UTR | 30.0% | |
| ACAAAGGTTGTTGCTATATC+TGG | + | chr3_4:71493588-71493607 | None:intergenic | 35.0% | |
| ATTCAAAGATGCTCCGAATA+TGG | - | chr3_4:71493639-71493658 | Msa0519440:three_prime_UTR | 35.0% | |
| AACATCAAAGACAGAGAATC+CGG | - | chr3_4:71493673-71493692 | Msa0519440:three_prime_UTR | 35.0% | |
| ! | TGATTTTATGCGATTAGCGA+AGG | + | chr3_4:71493716-71493735 | None:intergenic | 35.0% |
| AATTAATGGCACCTTTGTGA+GGG | + | chr3_4:71493786-71493805 | None:intergenic | 35.0% | |
| ATTTGGTATCCCATTGATAC+TGG | - | chr3_4:71493991-71494010 | Msa0519440:CDS | 35.0% | |
| !! | GATACTGGTTTATTCATCAC+CGG | - | chr3_4:71494006-71494025 | Msa0519440:CDS | 35.0% |
| CACACTATCACGATAATGAT+AGG | + | chr3_4:71494090-71494109 | None:intergenic | 35.0% | |
| ! | CGTGATAGTGTGTATATGTT+TGG | - | chr3_4:71494098-71494117 | Msa0519440:intron | 35.0% |
| GATACATTCATCAACAAAGG+TGG | + | chr3_4:71494232-71494251 | None:intergenic | 35.0% | |
| GCAGATACATTCATCAACAA+AGG | + | chr3_4:71494235-71494254 | None:intergenic | 35.0% | |
| TGTAAATTGATTGTAGGTGG+TGG | - | chr3_4:71494414-71494433 | Msa0519440:intron | 35.0% | |
| GAATTTCAAAATGCCTGGAA+AGG | - | chr3_4:71494438-71494457 | Msa0519440:intron | 35.0% | |
| TTCCAACATACTCATTTGTG+TGG | - | chr3_4:71494619-71494638 | Msa0519440:intron | 35.0% | |
| GGTCTTTACTAGTATGAACT+TGG | + | chr3_4:71494688-71494707 | None:intergenic | 35.0% | |
| TATACGAACCAGCAACATAT+AGG | - | chr3_4:71494924-71494943 | Msa0519440:intron | 35.0% | |
| AAGAATCAACCCCTTAATTC+TGG | - | chr3_4:71495031-71495050 | Msa0519440:CDS | 35.0% | |
| TTATGACATACTGAGAACTG+AGG | - | chr3_4:71495202-71495221 | Msa0519440:intron | 35.0% | |
| !! | TGATGGTGCAATACGTTTTT+GGG | - | chr3_4:71495372-71495391 | Msa0519440:CDS | 35.0% |
| !!! | CAATACGTTTTTGGGACATA+AGG | - | chr3_4:71495380-71495399 | Msa0519440:CDS | 35.0% |
| TTTGATTCCTGTGGGTAATA+AGG | + | chr3_4:71495619-71495638 | None:intergenic | 35.0% | |
| GGATGTAATTTCTGCTTCAT+TGG | + | chr3_4:71495727-71495746 | None:intergenic | 35.0% | |
| ATGAAGCAGAAATTACATCC+AGG | - | chr3_4:71495727-71495746 | Msa0519440:intron | 35.0% | |
| AGAGAAATGTCTCTTATCTG+AGG | - | chr3_4:71496292-71496311 | Msa0519440:intron | 35.0% | |
| GTCAAATAGGTGCTTAGATA+TGG | - | chr3_4:71496653-71496672 | Msa0519440:intron | 35.0% | |
| ATGCATGTGTTATATAGCAC+TGG | + | chr3_4:71496951-71496970 | None:intergenic | 35.0% | |
| ATGGTATGTTCAGTATTAGC+AGG | + | chr3_4:71497036-71497055 | None:intergenic | 35.0% | |
| GCAATGCATTCAAATTGCTA+CGG | - | chr3_4:71497114-71497133 | Msa0519440:intron | 35.0% | |
| CAATGCATTCAAATTGCTAC+GGG | - | chr3_4:71497115-71497134 | Msa0519440:intron | 35.0% | |
| AAATTGCTACGGGTAATCAA+GGG | - | chr3_4:71497125-71497144 | Msa0519440:intron | 35.0% | |
| AGACCATACTTTATGTCTTG+TGG | + | chr3_4:71497380-71497399 | None:intergenic | 35.0% | |
| CAAGACATAAAGTATGGTCT+TGG | - | chr3_4:71497380-71497399 | Msa0519440:intron | 35.0% | |
| AGAAGAGATTTCAACTTTCG+GGG | + | chr3_4:71497440-71497459 | None:intergenic | 35.0% | |
| GAGAAGAGATTTCAACTTTC+GGG | + | chr3_4:71497441-71497460 | None:intergenic | 35.0% | |
| AGTCATAGGCAGACTTTATT+TGG | - | chr3_4:71497465-71497484 | Msa0519440:intron | 35.0% | |
| TCCAATCGGTAATATAATCG+AGG | - | chr3_4:71497547-71497566 | Msa0519440:intron | 35.0% | |
| ACCTCGATTATATTACCGAT+TGG | + | chr3_4:71497551-71497570 | None:intergenic | 35.0% | |
| !! | TAATCGAGGTTCTGAAAAGT+AGG | - | chr3_4:71497561-71497580 | Msa0519440:intron | 35.0% |
| ! | ATTTTACTCTCCCTCATTGA+TGG | - | chr3_4:71498141-71498160 | Msa0519440:CDS | 35.0% |
| CTGATTCAAGATTGAGATTG+TGG | - | chr3_4:71498182-71498201 | Msa0519440:CDS | 35.0% | |
| CATGCATGGAACAAAAATGA+CGG | + | chr3_4:71498302-71498321 | None:intergenic | 35.0% | |
| !! | TCATTTTTGTTCCATGCATG+AGG | - | chr3_4:71498302-71498321 | Msa0519440:intron | 35.0% |
| ! | CATTTTTGTTCCATGCATGA+GGG | - | chr3_4:71498303-71498322 | Msa0519440:intron | 35.0% |
| ! | ATCTTGTTGATTAAACCAGC+AGG | + | chr3_4:71498609-71498628 | None:intergenic | 35.0% |
| CTGGTTTAATCAACAAGATC+AGG | - | chr3_4:71498610-71498629 | Msa0519440:intron | 35.0% | |
| ! | TTTTTCCCTGCTCTGTTATA+AGG | - | chr3_4:71498660-71498679 | Msa0519440:intron | 35.0% |
| ! | TTTTCCCTGCTCTGTTATAA+GGG | - | chr3_4:71498661-71498680 | Msa0519440:intron | 35.0% |
| TAACTGTAAAATGAACACGC+CGG | + | chr3_4:71498725-71498744 | None:intergenic | 35.0% | |
| TAATCAACTCATTCAGCGTA+TGG | - | chr3_4:71498767-71498786 | Msa0519440:intron | 35.0% | |
| TGTAAACAAGAAAAAGGGGA+AGG | + | chr3_4:71498806-71498825 | None:intergenic | 35.0% | |
| AACAGTGAAATTAGAATGGG+AGG | + | chr3_4:71498835-71498854 | None:intergenic | 35.0% | |
| !! | GTAAAATCAGTCGGTTTTTG+TGG | + | chr3_4:71499142-71499161 | None:intergenic | 35.0% |
| TATTAATGCTCGTTCTTCCA+AGG | - | chr3_4:71499176-71499195 | Msa0519440:intron | 35.0% | |
| ACTATGTAGGCCTACTTTAA+TGG | + | chr3_4:71499264-71499283 | None:intergenic | 35.0% | |
| GTAAGATGATGAGTTCCTAT+TGG | - | chr3_4:71499282-71499301 | Msa0519440:intron | 35.0% | |
| !! | TACTGGTTGTTATTTCATCC+TGG | + | chr3_4:71499367-71499386 | None:intergenic | 35.0% |
| AAATAGGTGCACCATTTCAT+CGG | + | chr3_4:71499629-71499648 | None:intergenic | 35.0% | |
| TATCACAAGGTCAGACATAT+TGG | + | chr3_4:71499703-71499722 | None:intergenic | 35.0% | |
| GTTTGTGGGATGTGTAAATA+AGG | - | chr3_4:71499838-71499857 | Msa0519440:CDS | 35.0% | |
| AAGAGCAGAATTCTACGAAG+TGG | - | chr3_4:71493465-71493484 | Msa0519440:three_prime_UTR | 40.0% | |
| ! | GAACTCAAGTGGACTCAAAT+GGG | + | chr3_4:71493501-71493520 | None:intergenic | 40.0% |
| TTGTTGCTATATCTGGTGAG+TGG | + | chr3_4:71493581-71493600 | None:intergenic | 40.0% | |
| ATGCTCCGAATATGGATACA+TGG | - | chr3_4:71493647-71493666 | Msa0519440:three_prime_UTR | 40.0% | |
| ! | GGAATTTGGACGCAATTTTC+CGG | + | chr3_4:71493695-71493714 | None:intergenic | 40.0% |
| ATGCGATTAGCGAAGGAATT+TGG | + | chr3_4:71493709-71493728 | None:intergenic | 40.0% | |
| ATTAATGGCACCTTTGTGAG+GGG | + | chr3_4:71493785-71493804 | None:intergenic | 40.0% | |
| GAATTAATGGCACCTTTGTG+AGG | + | chr3_4:71493787-71493806 | None:intergenic | 40.0% | |
| ACGCTGTATCTTCAGCTATT+TGG | - | chr3_4:71493974-71493993 | Msa0519440:intron | 40.0% | |
| GTGGTGAATTTCAAAATGCC+TGG | - | chr3_4:71494433-71494452 | Msa0519440:intron | 40.0% | |
| TCTCATACACTTATTGCTGC+AGG | - | chr3_4:71494493-71494512 | Msa0519440:intron | 40.0% | |
| CGTCTTTGTGATATTGCTTC+TGG | - | chr3_4:71494535-71494554 | Msa0519440:intron | 40.0% | |
| GCATTTGCTCATACTTTGTC+TGG | - | chr3_4:71494559-71494578 | Msa0519440:intron | 40.0% | |
| GACCACACAAATGAGTATGT+TGG | + | chr3_4:71494624-71494643 | None:intergenic | 40.0% | |
| TGTCTGCGTAATCTTAGACT+CGG | + | chr3_4:71494709-71494728 | None:intergenic | 40.0% | |
| ! | AGTCTAAGATTACGCAGACA+AGG | - | chr3_4:71494709-71494728 | Msa0519440:intron | 40.0% |
| ! | GTCTAAGATTACGCAGACAA+GGG | - | chr3_4:71494710-71494729 | Msa0519440:intron | 40.0% |
| ! | ATTCTAAAAACTTTGGGGGG+TGG | + | chr3_4:71494849-71494868 | None:intergenic | 40.0% |
| CACTCAAACCTATATGTTGC+TGG | + | chr3_4:71494935-71494954 | None:intergenic | 40.0% | |
| CAACATATAGGTTTGAGTGC+TGG | - | chr3_4:71494936-71494955 | Msa0519440:intron | 40.0% | |
| !!! | TCCTTATTTTTCCTCGTGCA+AGG | - | chr3_4:71494977-71494996 | Msa0519440:intron | 40.0% |
| TCCTTGCACGAGGAAAAATA+AGG | + | chr3_4:71494981-71495000 | None:intergenic | 40.0% | |
| AGCGCCATTATGTTAAGCAT+TGG | + | chr3_4:71495092-71495111 | None:intergenic | 40.0% | |
| TCTATCTAGTCACCTATCAG+TGG | + | chr3_4:71495176-71495195 | None:intergenic | 40.0% | |
| ATGGTGTAATGACCGTTGAA+TGG | - | chr3_4:71495311-71495330 | Msa0519440:CDS | 40.0% | |
| ACTTGAAGCAGACCATTCAA+CGG | + | chr3_4:71495326-71495345 | None:intergenic | 40.0% | |
| AATGGTCTGCTTCAAGTGAA+TGG | - | chr3_4:71495329-71495348 | Msa0519440:CDS | 40.0% | |
| ATGGTCTGCTTCAAGTGAAT+GGG | - | chr3_4:71495330-71495349 | Msa0519440:CDS | 40.0% | |
| AGTGAATGGGTCTTGATTAC+CGG | - | chr3_4:71495343-71495362 | Msa0519440:CDS | 40.0% | |
| !! | GTGATGGTGCAATACGTTTT+TGG | - | chr3_4:71495371-71495390 | Msa0519440:CDS | 40.0% |
| TTGGCAACTTTCTTCTGTAC+AGG | + | chr3_4:71495655-71495674 | None:intergenic | 40.0% | |
| GTACAGAAGAAAGTTGCCAA+TGG | - | chr3_4:71495655-71495674 | Msa0519440:intron | 40.0% | |
| AAGAAAGTTGCCAATGGAAG+TGG | - | chr3_4:71495661-71495680 | Msa0519440:intron | 40.0% | |
| TTAGATGATAGCCTGCCAAT+TGG | + | chr3_4:71495700-71495719 | None:intergenic | 40.0% | |
| AATTGGCAGGCTATCATCTA+AGG | - | chr3_4:71495699-71495718 | Msa0519440:intron | 40.0% | |
| ATTGGCAGGCTATCATCTAA+GGG | - | chr3_4:71495700-71495719 | Msa0519440:intron | 40.0% | |
| TCCAGGAATGATTTCTACTC+AGG | - | chr3_4:71495744-71495763 | Msa0519440:intron | 40.0% | |
| TCCTGAGTAGAAATCATTCC+TGG | + | chr3_4:71495748-71495767 | None:intergenic | 40.0% | |
| GACAGGATTGAAAGTAACAG+AGG | - | chr3_4:71495795-71495814 | Msa0519440:intron | 40.0% | |
| GGATTGAAAGTAACAGAGGA+TGG | - | chr3_4:71495799-71495818 | Msa0519440:intron | 40.0% | |
| ! | CATGGGTCTATTGACTAGTA+TGG | + | chr3_4:71495863-71495882 | None:intergenic | 40.0% |
| TATGCACAACGTCTTGTACA+AGG | - | chr3_4:71495884-71495903 | Msa0519440:intron | 40.0% | |
| AGTTACCCTATCAATACCAC+CGG | + | chr3_4:71496037-71496056 | None:intergenic | 40.0% | |
| !! | TGTGTTGATTAGGAGCAGTT+AGG | - | chr3_4:71496128-71496147 | Msa0519440:intron | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | chr3_4:71496170-71496189 | Msa0519440:intron | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | - | chr3_4:71496318-71496337 | Msa0519440:intron | 40.0% |
| ATAGGTGCTTAGATATGGGA+CGG | - | chr3_4:71496658-71496677 | Msa0519440:intron | 40.0% | |
| CAAATTGCTACGGGTAATCA+AGG | - | chr3_4:71497124-71497143 | Msa0519440:intron | 40.0% | |
| AATTGCTACGGGTAATCAAG+GGG | - | chr3_4:71497126-71497145 | Msa0519440:intron | 40.0% | |
| ATTATTACCAGTGTCGTGTC+CGG | - | chr3_4:71497236-71497255 | Msa0519440:intron | 40.0% | |
| GGACCCTAAAAACTTTAACC+TGG | - | chr3_4:71497486-71497505 | Msa0519440:intron | 40.0% | |
| ACTGTGTCTATATGGTTTCC+AGG | + | chr3_4:71497507-71497526 | None:intergenic | 40.0% | |
| GACGATTCACTGTGTCTATA+TGG | + | chr3_4:71497515-71497534 | None:intergenic | 40.0% | |
| AGAGAAGAAATACATCAGGG+CGG | - | chr3_4:71497623-71497642 | Msa0519440:intron | 40.0% | |
| CAAAAATGCTAAGAGCAGCT+TGG | - | chr3_4:71497886-71497905 | Msa0519440:CDS | 40.0% | |
| ATCAGACAGACCATCAATGA+GGG | + | chr3_4:71498154-71498173 | None:intergenic | 40.0% | |
| ! | TAGGTTTGCTTGTTTGCAAG+CGG | + | chr3_4:71498252-71498271 | None:intergenic | 40.0% |
| ATGAGGGTTGTGAAAGTAAG+CGG | - | chr3_4:71498319-71498338 | Msa0519440:intron | 40.0% | |
| AGGCATTTGATATGTGGTCT+GGG | - | chr3_4:71498540-71498559 | Msa0519440:intron | 40.0% | |
| ATGAGTCTATAAACTCCTGC+TGG | - | chr3_4:71498591-71498610 | Msa0519440:intron | 40.0% | |
| TTTCCCTGCTCTGTTATAAG+GGG | - | chr3_4:71498662-71498681 | Msa0519440:intron | 40.0% | |
| TTATAAGGGGTCAGTCAAAG+TGG | - | chr3_4:71498675-71498694 | Msa0519440:intron | 40.0% | |
| ! | TCAAAGTGGTGGAATCTGTT+TGG | - | chr3_4:71498689-71498708 | Msa0519440:intron | 40.0% |
| !! | CTGAATGAGTTGATTAGAGC+AGG | + | chr3_4:71498763-71498782 | None:intergenic | 40.0% |
| GAAAAAGGGGAAGGAAAGTA+AGG | + | chr3_4:71498797-71498816 | None:intergenic | 40.0% | |
| TGGAAAGAGATACAGACACA+AGG | - | chr3_4:71498870-71498889 | Msa0519440:intron | 40.0% | |
| GAAGAATAGAGACCTGAATG+AGG | - | chr3_4:71498961-71498980 | Msa0519440:intron | 40.0% | |
| GCTCACATTGGATCATTGAT+TGG | + | chr3_4:71499101-71499120 | None:intergenic | 40.0% | |
| !! | AAATCAGTCGGTTTTTGTGG+CGG | + | chr3_4:71499139-71499158 | None:intergenic | 40.0% |
| GACTTCTCGGTAAAATCAGT+CGG | + | chr3_4:71499151-71499170 | None:intergenic | 40.0% | |
| TAGGGTTCATTCAATGACCT+TGG | + | chr3_4:71499196-71499215 | None:intergenic | 40.0% | |
| GTCATTGAATGAACCCTAAG+AGG | - | chr3_4:71499198-71499217 | Msa0519440:intron | 40.0% | |
| GATGAGTTCCTATTGGATGA+CGG | - | chr3_4:71499289-71499308 | Msa0519440:intron | 40.0% | |
| ! | GTTTTACACCGTCATCCAAT+AGG | + | chr3_4:71499300-71499319 | None:intergenic | 40.0% |
| AAGGTCAATTGCCGATGAAA+TGG | - | chr3_4:71499615-71499634 | Msa0519440:CDS | 40.0% | |
| ACAAGGTCAGACATATTGGA+AGG | + | chr3_4:71499699-71499718 | None:intergenic | 40.0% | |
| TGACCTTGTGATAAACTGCA+GGG | - | chr3_4:71499710-71499729 | Msa0519440:CDS | 40.0% | |
| !! | GTGTAGTCCATTGCTTTTGT+AGG | - | chr3_4:71499922-71499941 | Msa0519440:CDS | 40.0% |
| ! | GGAACTCAAGTGGACTCAAA+TGG | + | chr3_4:71493502-71493521 | None:intergenic | 45.0% |
| TTTGAGTCCACTTGAGTTCC+AGG | - | chr3_4:71493502-71493521 | Msa0519440:three_prime_UTR | 45.0% | |
| TCTGGTGAGTGGTGATACTA+CGG | + | chr3_4:71493570-71493589 | None:intergenic | 45.0% | |
| AGGATTGAAGAGAACCTGAG+TGG | + | chr3_4:71494070-71494089 | None:intergenic | 45.0% | |
| ! | GCAGTCTTATACACCTTTCC+AGG | + | chr3_4:71494454-71494473 | None:intergenic | 45.0% |
| ACTTATTGCTGCAGGAACTG+AGG | - | chr3_4:71494501-71494520 | Msa0519440:intron | 45.0% | |
| CATACTTTGTCTGGTCATCG+TGG | - | chr3_4:71494568-71494587 | Msa0519440:intron | 45.0% | |
| ATCTAGTCACCTATCAGTGG+TGG | + | chr3_4:71495173-71495192 | None:intergenic | 45.0% | |
| GTGAATGGGTCTTGATTACC+GGG | - | chr3_4:71495344-71495363 | Msa0519440:CDS | 45.0% | |
| TGAATGGGTCTTGATTACCG+GGG | - | chr3_4:71495345-71495364 | Msa0519440:CDS | 45.0% | |
| AATCAATCTCAGACGCAGCT+TGG | - | chr3_4:71495427-71495446 | Msa0519440:intron | 45.0% | |
| CCTGTGGGTAATAAGGCTTT+AGG | + | chr3_4:71495612-71495631 | None:intergenic | 45.0% | |
| !! | CCTAAAGCCTTATTACCCAC+AGG | - | chr3_4:71495609-71495628 | Msa0519440:intron | 45.0% |
| GATCGTGCAACTGCTCATTA+TGG | - | chr3_4:71495766-71495785 | Msa0519440:intron | 45.0% | |
| GGCATGTATCTCTTAAGTGC+AGG | - | chr3_4:71495820-71495839 | Msa0519440:intron | 45.0% | |
| CAAGACGTTGTGCATAGCAT+GGG | + | chr3_4:71495880-71495899 | None:intergenic | 45.0% | |
| ACAAGACGTTGTGCATAGCA+TGG | + | chr3_4:71495881-71495900 | None:intergenic | 45.0% | |
| GGATACCTACCATACAAGGA+CGG | + | chr3_4:71496016-71496035 | None:intergenic | 45.0% | |
| GTCCTTGTATGGTAGGTATC+CGG | - | chr3_4:71496015-71496034 | Msa0519440:intron | 45.0% | |
| !! | AGGTATCCGGTGGTATTGAT+AGG | - | chr3_4:71496028-71496047 | Msa0519440:intron | 45.0% |
| !! | GGTATCCGGTGGTATTGATA+GGG | - | chr3_4:71496029-71496048 | Msa0519440:intron | 45.0% |
| TCTGAATTCCCCTACTGTTG+TGG | + | chr3_4:71496235-71496254 | None:intergenic | 45.0% | |
| CTCTCTGCCCAAAACCAATA+AGG | + | chr3_4:71496274-71496293 | None:intergenic | 45.0% | |
| ! | TATCTGAGGAGCTTTTGCTC+TGG | - | chr3_4:71496306-71496325 | Msa0519440:intron | 45.0% |
| ! | ATCTGAGGAGCTTTTGCTCT+GGG | - | chr3_4:71496307-71496326 | Msa0519440:intron | 45.0% |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | - | chr3_4:71496317-71496336 | Msa0519440:intron | 45.0% |
| GGAGGCTTACATACAGTGTT+AGG | + | chr3_4:71496412-71496431 | None:intergenic | 45.0% | |
| AGACATCGGTGCATCTTTGT+TGG | - | chr3_4:71496923-71496942 | Msa0519440:intron | 45.0% | |
| ATGCATTGCAGACTGACAGA+AGG | + | chr3_4:71497103-71497122 | None:intergenic | 45.0% | |
| CTGAAGACACTATGAAGCAC+TGG | + | chr3_4:71497274-71497293 | None:intergenic | 45.0% | |
| CAGTGCTTCATAGTGTCTTC+AGG | - | chr3_4:71497272-71497291 | Msa0519440:intron | 45.0% | |
| GAGAAGAAATACATCAGGGC+GGG | - | chr3_4:71497624-71497643 | Msa0519440:intron | 45.0% | |
| AGAAGAAATACATCAGGGCG+GGG | - | chr3_4:71497625-71497644 | Msa0519440:intron | 45.0% | |
| TACAACAGTGTTGCCCTCAA+TGG | - | chr3_4:71497746-71497765 | Msa0519440:intron | 45.0% | |
| ACCTTAGCCAGTTCCATTGA+GGG | + | chr3_4:71497762-71497781 | None:intergenic | 45.0% | |
| TACCTTAGCCAGTTCCATTG+AGG | + | chr3_4:71497763-71497782 | None:intergenic | 45.0% | |
| CATCAGACAGACCATCAATG+AGG | + | chr3_4:71498155-71498174 | None:intergenic | 45.0% | |
| ! | TTGATGGTCTGTCTGATGAC+AGG | - | chr3_4:71498157-71498176 | Msa0519440:CDS | 45.0% |
| TGATGGTCTGTCTGATGACA+GGG | - | chr3_4:71498158-71498177 | Msa0519440:CDS | 45.0% | |
| AGATTGTGGGATGTTGAGTC+AGG | - | chr3_4:71498196-71498215 | Msa0519440:CDS | 45.0% | |
| ACTTTCACAACCCTCATGCA+TGG | + | chr3_4:71498316-71498335 | None:intergenic | 45.0% | |
| !! | AGTGGTTGATGGGTGGAATT+GGG | + | chr3_4:71498463-71498482 | None:intergenic | 45.0% |
| !! | TAGTGGTTGATGGGTGGAAT+TGG | + | chr3_4:71498464-71498483 | None:intergenic | 45.0% |
| !! | GTTACTTAGTGGTTGATGGG+TGG | + | chr3_4:71498470-71498489 | None:intergenic | 45.0% |
| CAGGCATTTGATATGTGGTC+TGG | - | chr3_4:71498539-71498558 | Msa0519440:intron | 45.0% | |
| GATCAGGTATGTTCAACAGC+TGG | - | chr3_4:71498626-71498645 | Msa0519440:intron | 45.0% | |
| TGACCCCTTATAACAGAGCA+GGG | + | chr3_4:71498668-71498687 | None:intergenic | 45.0% | |
| !! | TCTGTTTGGTTTGTCAGCTC+CGG | - | chr3_4:71498703-71498722 | Msa0519440:intron | 45.0% |
| CAACTCATTCAGCGTATGGA+TGG | - | chr3_4:71498771-71498790 | Msa0519440:intron | 45.0% | |
| TTGTGTGTGCATGTCGTCTT+CGG | - | chr3_4:71498903-71498922 | Msa0519440:intron | 45.0% | |
| GTTTAATGGCTATGCACCGA+CGG | + | chr3_4:71499332-71499351 | None:intergenic | 45.0% | |
| CTGTCATAGGAGTTGTACAC+AGG | - | chr3_4:71499556-71499575 | Msa0519440:CDS | 45.0% | |
| TCATAGGAGTTGTACACAGG+TGG | - | chr3_4:71499559-71499578 | Msa0519440:CDS | 45.0% | |
| CTGACCTTGTGATAAACTGC+AGG | - | chr3_4:71499709-71499728 | Msa0519440:CDS | 45.0% | |
| CTCAGTTACTCCAGCTATTC+TGG | + | chr3_4:71499754-71499773 | None:intergenic | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | chr3_4:71496073-71496092 | Msa0519440:intron | 5.0% |
| !! | TATTATACAATAATATATTA+TGG | - | chr3_4:71498030-71498049 | Msa0519440:intron | 5.0% |
| CTTCACTCCTGGAACTCAAG+TGG | + | chr3_4:71493512-71493531 | None:intergenic | 50.0% | |
| CACTTGAGTTCCAGGAGTGA+AGG | - | chr3_4:71493510-71493529 | Msa0519440:three_prime_UTR | 50.0% | |
| TTGAGTTCCAGGAGTGAAGG+AGG | - | chr3_4:71493513-71493532 | Msa0519440:three_prime_UTR | 50.0% | |
| TCTTCTTCCTCCTTCACTCC+TGG | + | chr3_4:71493523-71493542 | None:intergenic | 50.0% | |
| GAAGAAGACGACGACGACTT+TGG | - | chr3_4:71493538-71493557 | Msa0519440:three_prime_UTR | 50.0% | |
| GAACTCGTTTCCCCTCACAA+AGG | - | chr3_4:71493772-71493791 | Msa0519440:three_prime_UTR | 50.0% | |
| TGCATCAGATGCATCCGTAG+CGG | - | chr3_4:71493849-71493868 | Msa0519440:exon | 50.0% | |
| GTGAACGTCGTAAACCGCTA+CGG | + | chr3_4:71493866-71493885 | None:intergenic | 50.0% | |
| TAGCGGTTTACGACGTTCAC+CGG | - | chr3_4:71493866-71493885 | Msa0519440:CDS | 50.0% | |
| CCATCTCCGTCGAAATCACT+CGG | + | chr3_4:71493892-71493911 | None:intergenic | 50.0% | |
| TTGGGACACTAACACCACTC+AGG | - | chr3_4:71494053-71494072 | Msa0519440:intron | 50.0% | |
| ! | TAGCGGATCGTCCTTAGAAC+CGG | - | chr3_4:71494814-71494833 | Msa0519440:intron | 50.0% |
| GCATTGGATGTTTGGCACAG+TGG | + | chr3_4:71495076-71495095 | None:intergenic | 50.0% | |
| TGTCAAGCTCCACCACTGAT+AGG | - | chr3_4:71495161-71495180 | Msa0519440:intron | 50.0% | |
| GAATGGGTCTTGATTACCGG+GGG | - | chr3_4:71495346-71495365 | Msa0519440:CDS | 50.0% | |
| TTGATTACCGGGGGTTGTGA+TGG | - | chr3_4:71495355-71495374 | Msa0519440:CDS | 50.0% | |
| TATTGCACCATCACAACCCC+CGG | + | chr3_4:71495365-71495384 | None:intergenic | 50.0% | |
| !!! | TTTTGGGACATAAGGCGTGC+TGG | - | chr3_4:71495388-71495407 | Msa0519440:CDS | 50.0% |
| ACGGAACGTTTGAGTAGAGG+TGG | + | chr3_4:71495460-71495479 | None:intergenic | 50.0% | |
| AGCACGGAACGTTTGAGTAG+AGG | + | chr3_4:71495463-71495482 | None:intergenic | 50.0% | |
| CAAACGTTCCGTGCTAACCA+AGG | - | chr3_4:71495468-71495487 | Msa0519440:intron | 50.0% | |
| ! | ATGTCCACTGCCACTTCCAT+TGG | + | chr3_4:71495674-71495693 | None:intergenic | 50.0% |
| !! | GCTCATTATGGTGCTGTGAC+AGG | - | chr3_4:71495778-71495797 | Msa0519440:intron | 50.0% |
| ATACTCCCTCCGTCCTTGTA+TGG | - | chr3_4:71496004-71496023 | Msa0519440:intron | 50.0% | |
| ACCTACCATACAAGGACGGA+GGG | + | chr3_4:71496012-71496031 | None:intergenic | 50.0% | |
| TACCTACCATACAAGGACGG+AGG | + | chr3_4:71496013-71496032 | None:intergenic | 50.0% | |
| CACCGGATACCTACCATACA+AGG | + | chr3_4:71496020-71496039 | None:intergenic | 50.0% | |
| CTTGTATGGTAGGTATCCGG+TGG | - | chr3_4:71496018-71496037 | Msa0519440:intron | 50.0% | |
| GCCATTTGGCCACAACAGTA+GGG | - | chr3_4:71496223-71496242 | Msa0519440:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | chr3_4:71496224-71496243 | Msa0519440:intron | 50.0% | |
| GTGCTTAGATATGGGACGGA+GGG | - | chr3_4:71496662-71496681 | Msa0519440:intron | 50.0% | |
| AGTGTTGCCCTCAATGGAAC+TGG | - | chr3_4:71497752-71497771 | Msa0519440:intron | 50.0% | |
| AACGCACGTACGATACTACG+TGG | - | chr3_4:71498563-71498582 | Msa0519440:intron | 50.0% | |
| CTGACCCCTTATAACAGAGC+AGG | + | chr3_4:71498669-71498688 | None:intergenic | 50.0% | |
| TAAGGGGTCAGTCAAAGTGG+TGG | - | chr3_4:71498678-71498697 | Msa0519440:intron | 50.0% | |
| TGGGGTAGTACAGCTCACAT+TGG | + | chr3_4:71499113-71499132 | None:intergenic | 50.0% | |
| !! | TGGGGCTAATGCTGCTTTAC+TGG | + | chr3_4:71499384-71499403 | None:intergenic | 50.0% |
| AGCAGCATTAGCCCCAGATA+TGG | - | chr3_4:71499388-71499407 | Msa0519440:intron | 50.0% | |
| TTCTTGTATGGTCGCCTGCA+AGG | - | chr3_4:71499596-71499615 | Msa0519440:CDS | 50.0% | |
| TCATCGGCAATTGACCTTGC+AGG | + | chr3_4:71499613-71499632 | None:intergenic | 50.0% | |
| TCGCCCTGCAGTTTATCACA+AGG | + | chr3_4:71499716-71499735 | None:intergenic | 50.0% | |
| TGTGATAAACTGCAGGGCGA+AGG | - | chr3_4:71499716-71499735 | Msa0519440:CDS | 50.0% | |
| ACTCCAGCTATTCTGGTCGT+CGG | + | chr3_4:71499747-71499766 | None:intergenic | 50.0% | |
| GACGACGACGACTTTGGTTG+TGG | - | chr3_4:71493544-71493563 | Msa0519440:three_prime_UTR | 55.0% | |
| CCGAGTGATTTCGACGGAGA+TGG | - | chr3_4:71493889-71493908 | Msa0519440:intron | 55.0% | |
| AGCGGATCGTCCTTAGAACC+GGG | - | chr3_4:71494815-71494834 | Msa0519440:intron | 55.0% | |
| GTTGCCAATGGAAGTGGCAG+TGG | - | chr3_4:71495667-71495686 | Msa0519440:intron | 55.0% | |
| GGCAGTGGACATCTGCCAAT+TGG | - | chr3_4:71495682-71495701 | Msa0519440:intron | 55.0% | |
| GTGGACATCTGCCAATTGGC+AGG | - | chr3_4:71495686-71495705 | Msa0519440:intron | 55.0% | |
| TCCCTCCGTCCTTGTATGGT+AGG | - | chr3_4:71496008-71496027 | Msa0519440:intron | 55.0% | |
| GGCCATTTGGCCACAACAGT+AGG | - | chr3_4:71496222-71496241 | Msa0519440:intron | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | chr3_4:71496227-71496246 | None:intergenic | 55.0% | |
| GGTGCTTAGATATGGGACGG+AGG | - | chr3_4:71496661-71496680 | Msa0519440:intron | 55.0% | |
| ! | GCACTGGCATACACGAACAC+CGG | + | chr3_4:71497258-71497277 | None:intergenic | 55.0% |
| GCCCTCAATGGAACTGGCTA+AGG | - | chr3_4:71497758-71497777 | Msa0519440:intron | 55.0% | |
| ! | TCGGTTTTTGTGGCGGTGGT+GGG | + | chr3_4:71499132-71499151 | None:intergenic | 55.0% |
| !! | TCAGTCGGTTTTTGTGGCGG+TGG | + | chr3_4:71499136-71499155 | None:intergenic | 55.0% |
| ATCCCGACGACCAGAATAGC+TGG | - | chr3_4:71499741-71499760 | Msa0519440:CDS | 55.0% | |
| CTCCAGCTATTCTGGTCGTC+GGG | + | chr3_4:71499746-71499765 | None:intergenic | 55.0% | |
| GGAGCAGCTGTGAAACACGT+AGG | - | chr3_4:71499875-71499894 | Msa0519440:CDS | 55.0% | |
| CACCGGCCGAGTGATTTCGA+CGG | - | chr3_4:71493883-71493902 | Msa0519440:intron | 60.0% | |
| CTCCGTCGAAATCACTCGGC+CGG | + | chr3_4:71493888-71493907 | None:intergenic | 60.0% | |
| GCGGATCGTCCTTAGAACCG+GGG | - | chr3_4:71494816-71494835 | Msa0519440:intron | 60.0% | |
| CGGATCGTCCTTAGAACCGG+GGG | - | chr3_4:71494817-71494836 | Msa0519440:intron | 60.0% | |
| ACGAACACCGGACACGACAC+TGG | + | chr3_4:71497246-71497265 | None:intergenic | 60.0% | |
| ! | CGGTTTTTGTGGCGGTGGTG+GGG | + | chr3_4:71499131-71499150 | None:intergenic | 60.0% |
| !! | GTCGGTTTTTGTGGCGGTGG+TGG | + | chr3_4:71499133-71499152 | None:intergenic | 60.0% |
| GGCATGCACCCCCGGTTCTA+AGG | + | chr3_4:71494828-71494847 | None:intergenic | 65.0% | |
| TGGGGGGTGGCATGCACCCC+CGG | + | chr3_4:71494836-71494855 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 71493464 | 71500159 | 71493464 | ID=Msa0519440;Name=Msa0519440 |
| chr3_4 | mRNA | 71493464 | 71500159 | 71493464 | ID=Msa0519440-mRNA-1;Parent=Msa0519440;Name=Msa0519440-mRNA-1;_AED=0.08;_eAED=0.08;_QI=194|1|1|1|1|1|8|387|441 |
| chr3_4 | exon | 71493464 | 71493892 | 71493464 | ID=Msa0519440-mRNA-1:exon:19660;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71493987 | 71494058 | 71493987 | ID=Msa0519440-mRNA-1:exon:19659;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71494992 | 71495081 | 71494992 | ID=Msa0519440-mRNA-1:exon:19658;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71495290 | 71495444 | 71495290 | ID=Msa0519440-mRNA-1:exon:19657;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71497782 | 71497992 | 71497782 | ID=Msa0519440-mRNA-1:exon:19656;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71498134 | 71498312 | 71498134 | ID=Msa0519440-mRNA-1:exon:19655;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71499034 | 71499193 | 71499034 | ID=Msa0519440-mRNA-1:exon:19654;Parent=Msa0519440-mRNA-1 |
| chr3_4 | exon | 71499549 | 71500159 | 71499549 | ID=Msa0519440-mRNA-1:exon:19653;Parent=Msa0519440-mRNA-1 |
| chr3_4 | five_prime_UTR | 71499966 | 71500159 | 71499966 | ID=Msa0519440-mRNA-1:five_prime_utr;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71499549 | 71499965 | 71499549 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71499034 | 71499193 | 71499034 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71498134 | 71498312 | 71498134 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71497782 | 71497992 | 71497782 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71495290 | 71495444 | 71495290 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71494992 | 71495081 | 71494992 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71493987 | 71494058 | 71493987 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | CDS | 71493851 | 71493892 | 71493851 | ID=Msa0519440-mRNA-1:cds;Parent=Msa0519440-mRNA-1 |
| chr3_4 | three_prime_UTR | 71493464 | 71493850 | 71493464 | ID=Msa0519440-mRNA-1:three_prime_utr;Parent=Msa0519440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
