Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519450 | XP_013461789.1 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519450 | sp|Q93ZG3|ACSA1_ARATH | 65.033 | 449 | 146 | 2 | 4 | 441 | 2 | 450 | 0.0 | 633 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519450 | A0A072V1E5 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0251640 | Msa0519450 | 0.802226 | 6.204659e-49 | -8.615850e-47 |
| Msa0519440 | Msa0519450 | 0.997846 | 1.940842e-250 | -8.615850e-47 |
| Msa0519450 | Msa0519520 | 0.891538 | 3.626264e-74 | -8.615850e-47 |
| Msa0519450 | Msa0519630 | 0.842284 | 2.840489e-58 | -8.615850e-47 |
| Msa0519450 | Msa0519640 | 0.824393 | 8.272162e-54 | -8.615850e-47 |
| Msa0519450 | Msa0672690 | 0.820030 | 8.505610e-53 | -8.615850e-47 |
| Msa0519450 | Msa0931520 | 0.826266 | 2.981359e-54 | -8.615850e-47 |
| Msa0519450 | Msa0967180 | 0.800385 | 1.477361e-48 | -8.615850e-47 |
| Msa0519450 | Msa0992280 | 0.800114 | 1.677203e-48 | -8.615850e-47 |
| Msa0519450 | Msa1455680 | 0.845405 | 4.145131e-59 | -8.615850e-47 |
| Msa0519450 | Msa1455710 | 0.841342 | 5.036432e-58 | -8.615850e-47 |
| Msa0519450 | Msa1455720 | 0.822652 | 2.111964e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519450 | MtrunA17_Chr3g0134861 | 98.639 | 441 | 6 | 0 | 1 | 441 | 1 | 441 | 0.0 | 912 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0519450 | AT1G27840.1 | 65.033 | 449 | 146 | 2 | 4 | 441 | 2 | 450 | 0.0 | 633 |
| Msa0519450 | AT1G27840.3 | 64.889 | 450 | 146 | 3 | 4 | 441 | 2 | 451 | 0.0 | 628 |
| Msa0519450 | AT1G19750.1 | 64.365 | 449 | 149 | 3 | 4 | 441 | 2 | 450 | 0.0 | 619 |
| Msa0519450 | AT1G27840.2 | 55.902 | 449 | 130 | 4 | 4 | 441 | 2 | 393 | 1.05e-179 | 507 |
| Msa0519450 | AT1G19750.2 | 63.664 | 333 | 110 | 3 | 120 | 441 | 1 | 333 | 2.02e-156 | 446 |
| Msa0519450 | AT2G16780.1 | 28.421 | 190 | 115 | 7 | 60 | 245 | 183 | 355 | 5.26e-11 | 64.7 |
| Msa0519450 | AT5G23430.1 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 7.82e-11 | 64.7 |
| Msa0519450 | AT5G23430.3 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 8.39e-11 | 64.7 |
| Msa0519450 | AT5G23430.2 | 27.481 | 131 | 92 | 2 | 99 | 229 | 10 | 137 | 8.39e-11 | 64.7 |
Find 120 sgRNAs with CRISPR-Local
Find 434 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAATTTGAAGGGAATTAA+TGG | 0.165546 | 3_4:+71520577 | None:intergenic |
| ATGCGATTAGCGAAGGAATT+TGG | 0.195129 | 3_4:+71520668 | None:intergenic |
| ACGCTGTATCTTCAGCTATT+TGG | 0.195270 | 3_4:-71520400 | Msa0519450:CDS |
| ATGTCTATACAACCTTATTT+TGG | 0.234183 | 3_4:+71514321 | None:intergenic |
| CAAAGTCTACAAGATGAAAA+AGG | 0.239317 | 3_4:+71514415 | None:intergenic |
| CTCAGTTACTCCAGCTATTC+TGG | 0.256646 | 3_4:+71514623 | None:intergenic |
| CTGCACACCAATTATAAATT+AGG | 0.259803 | 3_4:+71514573 | None:intergenic |
| ATTCAAAGATGCTCCGAATA+TGG | 0.262037 | 3_4:-71520735 | Msa0519450:exon |
| AATAAGGTTTGTTCTGGTTT+TGG | 0.263552 | 3_4:-71514520 | Msa0519450:three_prime_UTR |
| TTTGAGTCCACTTGAGTTCC+AGG | 0.269395 | 3_4:-71520872 | Msa0519450:five_prime_UTR |
| ATGATCATCATGTTAATGTT+TGG | 0.280560 | 3_4:-71520340 | Msa0519450:CDS |
| CGTCTTTGTGATATTGCTTC+TGG | 0.295957 | 3_4:-71519839 | Msa0519450:CDS |
| GTTTGTGGGATGTGTAAATA+AGG | 0.300439 | 3_4:-71514536 | Msa0519450:three_prime_UTR |
| GGATGTAATTTCTGCTTCAT+TGG | 0.303704 | 3_4:+71518649 | None:intergenic |
| AATTGGCAGGCTATCATCTA+AGG | 0.313839 | 3_4:-71518674 | Msa0519450:CDS |
| TGTGTAAATAAGGTTTGTTC+TGG | 0.317866 | 3_4:-71514526 | Msa0519450:three_prime_UTR |
| TGATCATCATGTTAATGTTT+GGG | 0.326481 | 3_4:-71520339 | Msa0519450:CDS |
| TTCTTCCATGTATCCATATT+CGG | 0.326893 | 3_4:+71520722 | None:intergenic |
| TCATCGGCAATTGACCTTGC+AGG | 0.331416 | 3_4:+71514764 | None:intergenic |
| TCTTCTTCCTCCTTCACTCC+TGG | 0.331611 | 3_4:+71520854 | None:intergenic |
| GCAGTCTTATACACCTTTCC+AGG | 0.331614 | 3_4:+71519923 | None:intergenic |
| ACAAAGGTTGTTGCTATATC+TGG | 0.335545 | 3_4:+71520789 | None:intergenic |
| ATTTGGTATCCCATTGATAC+TGG | 0.339602 | 3_4:-71520383 | Msa0519450:CDS |
| GAAAACATGTGCACAAATAA+AGG | 0.341601 | 3_4:+71514595 | None:intergenic |
| AGTGAATGGGTCTTGATTAC+CGG | 0.350685 | 3_4:-71519031 | Msa0519450:CDS |
| GCATTTGCTCATACTTTGTC+TGG | 0.353584 | 3_4:-71519815 | Msa0519450:CDS |
| GATCGTGCAACTGCTCATTA+TGG | 0.366149 | 3_4:-71518607 | Msa0519450:CDS |
| TCTGAGATTGATTTAAAACT+TGG | 0.377456 | 3_4:+71518957 | None:intergenic |
| CAGGCATTTGATATGTGGTC+TGG | 0.378935 | 3_4:-71515834 | Msa0519450:CDS |
| TGAGTTGTAGCTAATTGAAT+AGG | 0.379923 | 3_4:+71516105 | None:intergenic |
| TCCTGAGTAGAAATCATTCC+TGG | 0.383793 | 3_4:+71518628 | None:intergenic |
| GGAACTCAAGTGGACTCAAA+TGG | 0.416316 | 3_4:+71520875 | None:intergenic |
| CTTCTGTTAAATCAATTTGA+AGG | 0.421628 | 3_4:+71520567 | None:intergenic |
| TTTGGCAAAATATTAAAGAA+AGG | 0.427813 | 3_4:+71514339 | None:intergenic |
| GATGAATAAACCAGTATCAA+TGG | 0.433674 | 3_4:+71520373 | None:intergenic |
| AACATCAAAGACAGAGAATC+CGG | 0.439433 | 3_4:-71520701 | Msa0519450:CDS |
| CTGATTCAAGATTGAGATTG+TGG | 0.440434 | 3_4:-71516191 | Msa0519450:CDS |
| GAAGAAGACGACGACGACTT+TGG | 0.446834 | 3_4:-71520836 | Msa0519450:five_prime_UTR |
| AATGGTCTGCTTCAAGTGAA+TGG | 0.451347 | 3_4:-71519045 | Msa0519450:CDS |
| TTGGCAACTTTCTTCTGTAC+AGG | 0.455406 | 3_4:+71518721 | None:intergenic |
| CTGGTTTAATCAACAAGATC+AGG | 0.457234 | 3_4:-71515763 | Msa0519450:intron |
| TTATTCAGGCATTTGATATG+TGG | 0.458583 | 3_4:-71515839 | Msa0519450:intron |
| CTCCAGCTATTCTGGTCGTC+GGG | 0.460582 | 3_4:+71514631 | None:intergenic |
| CCGAGTGATTTCGACGGAGA+TGG | 0.462841 | 3_4:-71520485 | Msa0519450:CDS |
| ATGAATAAACCAGTATCAAT+GGG | 0.470303 | 3_4:+71520374 | None:intergenic |
| GGCAGTGGACATCTGCCAAT+TGG | 0.470528 | 3_4:-71518691 | Msa0519450:CDS |
| TAGCGGTTTACGACGTTCAC+CGG | 0.471610 | 3_4:-71520508 | Msa0519450:CDS |
| GAACTCAAGTGGACTCAAAT+GGG | 0.479222 | 3_4:+71520876 | None:intergenic |
| CTTCAAATTGATTTAACAGA+AGG | 0.481429 | 3_4:-71520566 | Msa0519450:CDS |
| ACGATAGACAAATTCTTGTA+TGG | 0.484547 | 3_4:-71514790 | Msa0519450:CDS |
| TTCTGTTAAATCAATTTGAA+GGG | 0.489653 | 3_4:+71520568 | None:intergenic |
| AAGAAAGTTGCCAATGGAAG+TGG | 0.491768 | 3_4:-71518712 | Msa0519450:CDS |
| GTTGCCAATGGAAGTGGCAG+TGG | 0.492604 | 3_4:-71518706 | Msa0519450:CDS |
| AATCAATCTCAGACGCAGCT+TGG | 0.494603 | 3_4:-71518947 | Msa0519450:CDS |
| ATCCCGACGACCAGAATAGC+TGG | 0.496379 | 3_4:-71514633 | Msa0519450:CDS |
| GACGACGACGACTTTGGTTG+TGG | 0.498634 | 3_4:-71520830 | Msa0519450:five_prime_UTR |
| GCTCATTATGGTGCTGTGAC+AGG | 0.504885 | 3_4:-71518595 | Msa0519450:CDS |
| AACATGATGATCATAAGAAC+CGG | 0.508996 | 3_4:+71520349 | None:intergenic |
| TTAGATGATAGCCTGCCAAT+TGG | 0.511047 | 3_4:+71518676 | None:intergenic |
| GTGGACATCTGCCAATTGGC+AGG | 0.512661 | 3_4:-71518687 | Msa0519450:CDS |
| ATGGTCTGCTTCAAGTGAAT+GGG | 0.514760 | 3_4:-71519044 | Msa0519450:CDS |
| AGGCATTTGATATGTGGTCT+GGG | 0.514949 | 3_4:-71515833 | Msa0519450:CDS |
| AGATTGTGGGATGTTGAGTC+AGG | 0.515425 | 3_4:-71516177 | Msa0519450:CDS |
| GTGGTGAATTTCAAAATGCC+TGG | 0.516745 | 3_4:-71519941 | Msa0519450:CDS |
| GATACTGGTTTATTCATCAC+CGG | 0.517438 | 3_4:-71520368 | Msa0519450:CDS |
| AAGGTCAATTGCCGATGAAA+TGG | 0.525899 | 3_4:-71514759 | Msa0519450:intron |
| GTGAATGGGTCTTGATTACC+GGG | 0.526216 | 3_4:-71519030 | Msa0519450:CDS |
| ATCTTGTTGATTAAACCAGC+AGG | 0.528118 | 3_4:+71515767 | None:intergenic |
| AAATAGGTGCACCATTTCAT+CGG | 0.529434 | 3_4:+71514748 | None:intergenic |
| CACTTGAGTTCCAGGAGTGA+AGG | 0.532137 | 3_4:-71520864 | Msa0519450:five_prime_UTR |
| TTCTTGTATGGTCGCCTGCA+AGG | 0.534246 | 3_4:-71514778 | Msa0519450:CDS |
| TCCAGGAATGATTTCTACTC+AGG | 0.535159 | 3_4:-71518629 | Msa0519450:CDS |
| ATGAGTCTATAAACTCCTGC+TGG | 0.535705 | 3_4:-71515782 | Msa0519450:CDS |
| ATGTCCACTGCCACTTCCAT+TGG | 0.540411 | 3_4:+71518702 | None:intergenic |
| CTCCGTCGAAATCACTCGGC+CGG | 0.540498 | 3_4:+71520489 | None:intergenic |
| TCAATTTCAATCAGTAACAA+AGG | 0.543759 | 3_4:+71520773 | None:intergenic |
| TCTCATACACTTATTGCTGC+AGG | 0.544585 | 3_4:-71519881 | Msa0519450:CDS |
| ACTTTCACAACCCTCATGCA+TGG | 0.546812 | 3_4:+71516060 | None:intergenic |
| GGCATGTATCTCTTAAGTGC+AGG | 0.549168 | 3_4:-71518553 | Msa0519450:intron |
| AATTAATGGCACCTTTGTGA+GGG | 0.550485 | 3_4:+71520591 | None:intergenic |
| AGCACGGAACGTTTGAGTAG+AGG | 0.550967 | 3_4:+71518914 | None:intergenic |
| ACTCCAGCTATTCTGGTCGT+CGG | 0.553340 | 3_4:+71514630 | None:intergenic |
| TCTGGTGAGTGGTGATACTA+CGG | 0.566490 | 3_4:+71520807 | None:intergenic |
| GAATTAATGGCACCTTTGTG+AGG | 0.566662 | 3_4:+71520590 | None:intergenic |
| AATTCTACCTACAAAAGCAA+TGG | 0.569998 | 3_4:+71514445 | None:intergenic |
| ATGCTCCGAATATGGATACA+TGG | 0.573122 | 3_4:-71520727 | Msa0519450:exon |
| TGATTCAAGATTGAGATTGT+GGG | 0.573902 | 3_4:-71516190 | Msa0519450:CDS |
| TTGAGTTCCAGGAGTGAAGG+AGG | 0.574002 | 3_4:-71520861 | Msa0519450:five_prime_UTR |
| TAGGTTTGCTTGTTTGCAAG+CGG | 0.575957 | 3_4:+71516124 | None:intergenic |
| CTTCACTCCTGGAACTCAAG+TGG | 0.579327 | 3_4:+71520865 | None:intergenic |
| CCATCTCCGTCGAAATCACT+CGG | 0.585946 | 3_4:+71520485 | None:intergenic |
| TGTGATAAACTGCAGGGCGA+AGG | 0.586427 | 3_4:-71514658 | Msa0519450:intron |
| CTGTCATAGGAGTTGTACAC+AGG | 0.588460 | 3_4:-71514818 | Msa0519450:intron |
| ATGAAGCAGAAATTACATCC+AGG | 0.589532 | 3_4:-71518646 | Msa0519450:CDS |
| TATTGCACCATCACAACCCC+CGG | 0.594673 | 3_4:+71519012 | None:intergenic |
| AAGAGCAGAATTCTACGAAG+TGG | 0.600991 | 3_4:-71520909 | Msa0519450:five_prime_UTR |
| GGATTGAAAGTAACAGAGGA+TGG | 0.605564 | 3_4:-71518574 | Msa0519450:CDS |
| ATGGTGTAATGACCGTTGAA+TGG | 0.619386 | 3_4:-71519063 | Msa0519450:CDS |
| ATTAATGGCACCTTTGTGAG+GGG | 0.625225 | 3_4:+71520592 | None:intergenic |
| TCATAGGAGTTGTACACAGG+TGG | 0.630134 | 3_4:-71514815 | Msa0519450:intron |
| GTGAACGTCGTAAACCGCTA+CGG | 0.633953 | 3_4:+71520511 | None:intergenic |
| GTACAGAAGAAAGTTGCCAA+TGG | 0.635528 | 3_4:-71518718 | Msa0519450:CDS |
| GAATGGGTCTTGATTACCGG+GGG | 0.639598 | 3_4:-71519028 | Msa0519450:CDS |
| GAATTTCAAAATGCCTGGAA+AGG | 0.640053 | 3_4:-71519936 | Msa0519450:CDS |
| CAAACGTTCCGTGCTAACCA+AGG | 0.640720 | 3_4:-71518906 | Msa0519450:intron |
| ACTTATTGCTGCAGGAACTG+AGG | 0.640922 | 3_4:-71519873 | Msa0519450:CDS |
| ATTGGCAGGCTATCATCTAA+GGG | 0.645229 | 3_4:-71518673 | Msa0519450:CDS |
| TTGGGACACTAACACCACTC+AGG | 0.656420 | 3_4:-71520321 | Msa0519450:intron |
| TGCATCAGATGCATCCGTAG+CGG | 0.664028 | 3_4:-71520525 | Msa0519450:CDS |
| CATACTTTGTCTGGTCATCG+TGG | 0.668716 | 3_4:-71519806 | Msa0519450:intron |
| GGAGCAGCTGTGAAACACGT+AGG | 0.678028 | 3_4:-71514499 | Msa0519450:three_prime_UTR |
| GACAGGATTGAAAGTAACAG+AGG | 0.681612 | 3_4:-71518578 | Msa0519450:CDS |
| ACTTGAAGCAGACCATTCAA+CGG | 0.681684 | 3_4:+71519051 | None:intergenic |
| ACGGAACGTTTGAGTAGAGG+TGG | 0.681954 | 3_4:+71518917 | None:intergenic |
| CACCGGCCGAGTGATTTCGA+CGG | 0.688986 | 3_4:-71520491 | Msa0519450:CDS |
| GAACTCGTTTCCCCTCACAA+AGG | 0.705864 | 3_4:-71520602 | Msa0519450:CDS |
| TTGTTGCTATATCTGGTGAG+TGG | 0.725606 | 3_4:+71520796 | None:intergenic |
| TGAATGGGTCTTGATTACCG+GGG | 0.746792 | 3_4:-71519029 | Msa0519450:CDS |
| AACGCACGTACGATACTACG+TGG | 0.751494 | 3_4:-71515810 | Msa0519450:CDS |
| AGGATTGAAGAGAACCTGAG+TGG | 0.792869 | 3_4:+71520307 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTTAAATTAGAATAAACTA+CGG | + | chr3_4:71514970-71514989 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAAAAACCT+TGG | + | chr3_4:71516261-71516280 | None:intergenic | 10.0% |
| !! | TCAATGAATATTATATTATT+TGG | + | chr3_4:71517653-71517672 | None:intergenic | 10.0% |
| !! | TAGAAATGATTATACATATT+TGG | - | chr3_4:71514916-71514935 | Msa0519450:intron | 15.0% |
| !!! | TATACTATTCTAAAAACTTT+GGG | + | chr3_4:71515628-71515647 | None:intergenic | 15.0% |
| !!! | TATTATATGCATGAATTTTT+TGG | - | chr3_4:71515896-71515915 | Msa0519450:intron | 15.0% |
| !! | GAATTCAGAATTATTAAATT+AGG | - | chr3_4:71517020-71517039 | Msa0519450:intron | 15.0% |
| !!! | AAATGTTCTATATTTTTTAG+AGG | - | chr3_4:71517509-71517528 | Msa0519450:intron | 15.0% |
| !! | ATATATACAATTTGAGAAAA+AGG | - | chr3_4:71517625-71517644 | Msa0519450:intron | 15.0% |
| !!! | GGTTAAATCTTATTTATATA+GGG | + | chr3_4:71518588-71518607 | None:intergenic | 15.0% |
| !!! | AGGTTAAATCTTATTTATAT+AGG | + | chr3_4:71518589-71518608 | None:intergenic | 15.0% |
| !! | ATTTGTAATTAATACTTATC+TGG | - | chr3_4:71518629-71518648 | Msa0519450:CDS | 15.0% |
| !! | TAAAATGTAAACAAGAAAAA+GGG | + | chr3_4:71519585-71519604 | None:intergenic | 15.0% |
| !! | ATAAAATGTAAACAAGAAAA+AGG | + | chr3_4:71519586-71519605 | None:intergenic | 15.0% |
| !! | CATTAAAAATGATTATAGAA+CGG | + | chr3_4:71519776-71519795 | None:intergenic | 15.0% |
| !!! | TCTATAATCATTTTTAATGA+TGG | - | chr3_4:71519777-71519796 | Msa0519450:intron | 15.0% |
| !!! | ATTATCTTTTTATATATGCA+TGG | - | chr3_4:71520438-71520457 | Msa0519450:CDS | 15.0% |
| !!! | ATGTTTTCCTAATTTATAAT+TGG | - | chr3_4:71520567-71520586 | Msa0519450:CDS | 15.0% |
| !!! | TTTCCTTTAATTTATTTTTC+AGG | - | chr3_4:71520778-71520797 | Msa0519450:five_prime_UTR | 15.0% |
| !!! | TTCCTTTAATTTATTTTTCA+GGG | - | chr3_4:71520779-71520798 | Msa0519450:five_prime_UTR | 15.0% |
| !!! | TTTAATATTTTGCCAAAATA+AGG | - | chr3_4:71520814-71520833 | Msa0519450:five_prime_UTR | 15.0% |
| !! | TTCTGTTAAATCAATTTGAA+GGG | + | chr3_4:71514582-71514601 | None:intergenic | 20.0% |
| !! | TAGTTAGAAACAATATTACA+AGG | - | chr3_4:71515055-71515074 | Msa0519450:intron | 20.0% |
| !! | TACTATTGTAAATTGATTGT+AGG | - | chr3_4:71515181-71515200 | Msa0519450:intron | 20.0% |
| !!! | ATACTATTCTAAAAACTTTG+GGG | + | chr3_4:71515627-71515646 | None:intergenic | 20.0% |
| !!! | GTATACTATTCTAAAAACTT+TGG | + | chr3_4:71515629-71515648 | None:intergenic | 20.0% |
| !! | TAACTTAAATGCAAGTATTT+AGG | - | chr3_4:71516349-71516368 | Msa0519450:intron | 20.0% |
| !! | TATTAAATTAGGAACCTTAT+TGG | - | chr3_4:71517031-71517050 | Msa0519450:intron | 20.0% |
| !!! | TCTTTTGTTTCTCTTTAATT+CGG | - | chr3_4:71517157-71517176 | Msa0519450:intron | 20.0% |
| !! | AAGAAATGTGAAAAAAACAA+AGG | + | chr3_4:71517207-71517226 | None:intergenic | 20.0% |
| !! | ACAAGTTAGTAGTATTAATT+AGG | - | chr3_4:71517330-71517349 | Msa0519450:intron | 20.0% |
| !! | CAAGTTAGTAGTATTAATTA+GGG | - | chr3_4:71517331-71517350 | Msa0519450:intron | 20.0% |
| !! | AAGTTAGTAGTATTAATTAG+GGG | - | chr3_4:71517332-71517351 | Msa0519450:intron | 20.0% |
| !! | AATTTACAATAAACGACATT+TGG | + | chr3_4:71517562-71517581 | None:intergenic | 20.0% |
| !! | ATTGTTAACAATGAAAAAAC+AGG | + | chr3_4:71517758-71517777 | None:intergenic | 20.0% |
| !!! | TCAATTAGTTTATTTCCAAT+CGG | - | chr3_4:71518307-71518326 | Msa0519450:intron | 20.0% |
| !! | TCTTCTTTATATATCTCATT+TGG | + | chr3_4:71518494-71518513 | None:intergenic | 20.0% |
| !!! | TAATTTCTAAGAATACAATG+AGG | - | chr3_4:71519264-71519283 | Msa0519450:intron | 20.0% |
| !! | AAAATGTAAACAAGAAAAAG+GGG | + | chr3_4:71519584-71519603 | None:intergenic | 20.0% |
| !! | GGAATAAATTATGAGTTTAA+TGG | + | chr3_4:71520119-71520138 | None:intergenic | 20.0% |
| !! | TTAAACTCATAATTTATTCC+AGG | - | chr3_4:71520119-71520138 | Msa0519450:intron | 20.0% |
| !!! | TTAAAAAGTACATGAAGTTT+AGG | + | chr3_4:71520294-71520313 | None:intergenic | 20.0% |
| !! | CTCAATAAATTGTTTCAAAT+AGG | + | chr3_4:71520418-71520437 | None:intergenic | 20.0% |
| !!! | TCCTTTAATTTATTTTTCAG+GGG | - | chr3_4:71520780-71520799 | Msa0519450:five_prime_UTR | 20.0% |
| !! | TTTGGCAAAATATTAAAGAA+AGG | + | chr3_4:71520811-71520830 | None:intergenic | 20.0% |
| !! | AGAGCAACAAAAAAAAAAAA+AGG | + | chr3_4:71520912-71520931 | None:intergenic | 20.0% |
| ! | TCAATTTCAATCAGTAACAA+AGG | + | chr3_4:71514377-71514396 | None:intergenic | 25.0% |
| ! | ATCAATTTGAAGGGAATTAA+TGG | + | chr3_4:71514573-71514592 | None:intergenic | 25.0% |
| ! | CTTCTGTTAAATCAATTTGA+AGG | + | chr3_4:71514583-71514602 | None:intergenic | 25.0% |
| !! | CTTCAAATTGATTTAACAGA+AGG | - | chr3_4:71514581-71514600 | Msa0519450:three_prime_UTR | 25.0% |
| ! | ATGAATAAACCAGTATCAAT+GGG | + | chr3_4:71514776-71514795 | None:intergenic | 25.0% |
| ! | ATGATCATCATGTTAATGTT+TGG | - | chr3_4:71514807-71514826 | Msa0519450:CDS | 25.0% |
| ! | TGATCATCATGTTAATGTTT+GGG | - | chr3_4:71514808-71514827 | Msa0519450:CDS | 25.0% |
| ! | TATTGTAAATTGATTGTAGG+TGG | - | chr3_4:71515184-71515203 | Msa0519450:intron | 25.0% |
| ! | ACAAGGGAAAAAAAAAATAG+TGG | - | chr3_4:71515499-71515518 | Msa0519450:intron | 25.0% |
| ! | CAAGGGAAAAAAAAAATAGT+GGG | - | chr3_4:71515500-71515519 | Msa0519450:intron | 25.0% |
| ! | CTACTATCTATCAAAAGAAA+AGG | + | chr3_4:71515567-71515586 | None:intergenic | 25.0% |
| !! | TACTATTCTAAAAACTTTGG+GGG | + | chr3_4:71515626-71515645 | None:intergenic | 25.0% |
| !!! | TTTGTTTTCACCAGAATTAA+GGG | + | chr3_4:71515817-71515836 | None:intergenic | 25.0% |
| ! | TGATGTTATGTATTATCGAA+AGG | - | chr3_4:71516027-71516046 | Msa0519450:intron | 25.0% |
| !! | ATGATTTCTTTTATGTCAGA+TGG | - | chr3_4:71516065-71516084 | Msa0519450:CDS | 25.0% |
| !! | TCTGAGATTGATTTAAAACT+TGG | + | chr3_4:71516193-71516212 | None:intergenic | 25.0% |
| !! | TTGCATTTAAGTTAAGTACT+TGG | + | chr3_4:71516343-71516362 | None:intergenic | 25.0% |
| !! | TTTTTGTATTTGATTCCTGT+GGG | + | chr3_4:71516401-71516420 | None:intergenic | 25.0% |
| !! | ATTTTTGTATTTGATTCCTG+TGG | + | chr3_4:71516402-71516421 | None:intergenic | 25.0% |
| !!! | AATGTCTAACATTTTTGGAT+TGG | + | chr3_4:71516750-71516769 | None:intergenic | 25.0% |
| ! | CCAAAAATGTTAGACATTAA+CGG | - | chr3_4:71516752-71516771 | Msa0519450:intron | 25.0% |
| !!! | TGCAGTAATTTGTATTGATT+AGG | - | chr3_4:71516932-71516951 | Msa0519450:intron | 25.0% |
| !!! | TAATTTGTATTGATTAGGAG+CGG | - | chr3_4:71516937-71516956 | Msa0519450:intron | 25.0% |
| !!! | GCCTTATTTATACAAACTAA+GGG | + | chr3_4:71516979-71516998 | None:intergenic | 25.0% |
| ! | TTTGTATAAATAAGGCCATT+TGG | - | chr3_4:71516983-71517002 | Msa0519450:intron | 25.0% |
| !!! | CTTTTGTTTCTCTTTAATTC+GGG | - | chr3_4:71517158-71517177 | Msa0519450:intron | 25.0% |
| ! | AAATGTGAAAAAAACAAAGG+AGG | + | chr3_4:71517204-71517223 | None:intergenic | 25.0% |
| ! | ATGCATCTAGTAATTTGAAA+AGG | - | chr3_4:71517378-71517397 | Msa0519450:intron | 25.0% |
| ! | TGCATCTAGTAATTTGAAAA+GGG | - | chr3_4:71517379-71517398 | Msa0519450:intron | 25.0% |
| ! | GGACAAAAATAAAGTCAAAT+AGG | - | chr3_4:71517414-71517433 | Msa0519450:intron | 25.0% |
| ! | ACTGAAAAAAGATAAGACAT+CGG | - | chr3_4:71517683-71517702 | Msa0519450:intron | 25.0% |
| ! | TTAGAATATTCATTGTACAG+AGG | + | chr3_4:71518107-71518126 | None:intergenic | 25.0% |
| !!! | GGTTTGTTTTGAGAATTTAT+TGG | + | chr3_4:71518133-71518152 | None:intergenic | 25.0% |
| ! | AACTAATTATACTGAGCAAA+AGG | + | chr3_4:71518187-71518206 | None:intergenic | 25.0% |
| !! | TTTCCAGGTTAAAGTTTTTA+GGG | + | chr3_4:71518266-71518285 | None:intergenic | 25.0% |
| ! | AGAAAAATAGAATACAGTAG+AGG | - | chr3_4:71518441-71518460 | Msa0519450:intron | 25.0% |
| ! | GGGATATACATCTATATATA+AGG | + | chr3_4:71518568-71518587 | None:intergenic | 25.0% |
| !!! | GTTTTGCTTTTGTTAAGTAT+AGG | + | chr3_4:71518609-71518628 | None:intergenic | 25.0% |
| !!! | TATTTTGATTGTATTTGTGC+AGG | + | chr3_4:71519156-71519175 | None:intergenic | 25.0% |
| ! | CTTAGAAATTAGTTACTTAG+TGG | + | chr3_4:71519255-71519274 | None:intergenic | 25.0% |
| ! | CAAAACAGTGAAATTAGAAT+GGG | + | chr3_4:71519612-71519631 | None:intergenic | 25.0% |
| ! | ACAAAACAGTGAAATTAGAA+TGG | + | chr3_4:71519613-71519632 | None:intergenic | 25.0% |
| !!! | CTGTTTTGTTCAAATGAAAA+TGG | - | chr3_4:71519624-71519643 | Msa0519450:intron | 25.0% |
| !!! | CGGTTTTTTTCTTCTTTTAT+TGG | - | chr3_4:71519697-71519716 | Msa0519450:intron | 25.0% |
| !!! | ATTTTAGAAAATCCTCATTC+AGG | + | chr3_4:71519749-71519768 | None:intergenic | 25.0% |
| ! | CATTAATATGAATGACTTCT+CGG | + | chr3_4:71519937-71519956 | None:intergenic | 25.0% |
| ! | CATGAAAATATTTCCTCTTA+GGG | + | chr3_4:71519987-71520006 | None:intergenic | 25.0% |
| ! | ACATGAAAATATTTCCTCTT+AGG | + | chr3_4:71519988-71520007 | None:intergenic | 25.0% |
| ! | ACTTTAATGGCTATTCTTAT+TGG | + | chr3_4:71520024-71520043 | None:intergenic | 25.0% |
| ! | ATAAGAATAGCCATTAAAGT+AGG | - | chr3_4:71520024-71520043 | Msa0519450:intron | 25.0% |
| ! | TTAAATTGAGATCCATATCT+GGG | + | chr3_4:71520176-71520195 | None:intergenic | 25.0% |
| !! | TTTGTATTTTGCATGTTTGT+GGG | - | chr3_4:71520597-71520616 | Msa0519450:CDS | 25.0% |
| ! | AAAGTCTACAAGATGAAAAA+GGG | + | chr3_4:71520734-71520753 | None:intergenic | 25.0% |
| ! | TCCCCTGAAAAATAAATTAA+AGG | + | chr3_4:71520784-71520803 | None:intergenic | 25.0% |
| !!! | ATGTCTATACAACCTTATTT+TGG | + | chr3_4:71520829-71520848 | None:intergenic | 25.0% |
| !!! | TATGCATACACCTTTTTTTT+GGG | + | chr3_4:71520860-71520879 | None:intergenic | 25.0% |
| !!! | ATATGCATACACCTTTTTTT+TGG | + | chr3_4:71520861-71520880 | None:intergenic | 25.0% |
| TTCTTCCATGTATCCATATT+CGG | + | chr3_4:71514428-71514447 | None:intergenic | 30.0% | |
| GATGAATAAACCAGTATCAA+TGG | + | chr3_4:71514777-71514796 | None:intergenic | 30.0% | |
| AACATGATGATCATAAGAAC+CGG | + | chr3_4:71514801-71514820 | None:intergenic | 30.0% | |
| ! | GTGATAGTGTGTATATGTTT+GGG | - | chr3_4:71514872-71514891 | Msa0519450:intron | 30.0% |
| ACAATAGTACAACACAACAA+AGG | + | chr3_4:71515170-71515189 | None:intergenic | 30.0% | |
| CTATTCTATTTGACAAGAGA+TGG | - | chr3_4:71515416-71515435 | Msa0519450:intron | 30.0% | |
| ! | CTTTTGATAGATAGTAGTAG+CGG | - | chr3_4:71515570-71515589 | Msa0519450:intron | 30.0% |
| ! | ACTATTCTAAAAACTTTGGG+GGG | + | chr3_4:71515625-71515644 | None:intergenic | 30.0% |
| !!! | TTATTTTTTATCCTTGCACG+AGG | + | chr3_4:71515764-71515783 | None:intergenic | 30.0% |
| ! | TTGTTTTCACCAGAATTAAG+GGG | + | chr3_4:71515816-71515835 | None:intergenic | 30.0% |
| !!! | CTTTGTTTTCACCAGAATTA+AGG | + | chr3_4:71515818-71515837 | None:intergenic | 30.0% |
| CTTAATTCTGGTGAAAACAA+AGG | - | chr3_4:71515816-71515835 | Msa0519450:CDS | 30.0% | |
| !! | TATGTTAAGCATTGGATGTT+TGG | + | chr3_4:71515857-71515876 | None:intergenic | 30.0% |
| ACATCCAATGCTTAACATAA+TGG | - | chr3_4:71515858-71515877 | Msa0519450:intron | 30.0% | |
| GCTTGACATATTTCATAAGT+GGG | + | chr3_4:71515922-71515941 | None:intergenic | 30.0% | |
| AGCTTGACATATTTCATAAG+TGG | + | chr3_4:71515923-71515942 | None:intergenic | 30.0% | |
| TGTTATGTATTATCGAAAGG+AGG | - | chr3_4:71516030-71516049 | Msa0519450:intron | 30.0% | |
| AAAAAAAACCTTGGTTAGCA+CGG | + | chr3_4:71516252-71516271 | None:intergenic | 30.0% | |
| ! | CCGTTAATGTCTAACATTTT+TGG | + | chr3_4:71516755-71516774 | None:intergenic | 30.0% |
| !! | ATGCAGTATTTGTGTTGATT+AGG | - | chr3_4:71516892-71516911 | Msa0519450:intron | 30.0% |
| !! | GCCCTTAGTTTGTATAAATA+AGG | - | chr3_4:71516975-71516994 | Msa0519450:intron | 30.0% |
| !! | GGCCTTATTTATACAAACTA+AGG | + | chr3_4:71516980-71516999 | None:intergenic | 30.0% |
| !!! | ATTAGGAACCTTATTGGTTT+TGG | - | chr3_4:71517037-71517056 | Msa0519450:intron | 30.0% |
| !!! | TTAGGAACCTTATTGGTTTT+GGG | - | chr3_4:71517038-71517057 | Msa0519450:intron | 30.0% |
| CATGCAAACAAATGACAATT+TGG | + | chr3_4:71517280-71517299 | None:intergenic | 30.0% | |
| ! | TATTAATTAGGGGTATGTTC+AGG | - | chr3_4:71517342-71517361 | Msa0519450:intron | 30.0% |
| GCATCTAGTAATTTGAAAAG+GGG | - | chr3_4:71517380-71517399 | Msa0519450:intron | 30.0% | |
| TTGAAAAGGGGTTTACATTT+AGG | - | chr3_4:71517392-71517411 | Msa0519450:intron | 30.0% | |
| TGAAAAGGGGTTTACATTTA+GGG | - | chr3_4:71517393-71517412 | Msa0519450:intron | 30.0% | |
| TCAAATAGGTGCTTAGATAT+GGG | - | chr3_4:71517428-71517447 | Msa0519450:intron | 30.0% | |
| TATTTGAGAGCAATTTGTCA+TGG | + | chr3_4:71517829-71517848 | None:intergenic | 30.0% | |
| ! | TGCTCTCAAATATTTTCACA+AGG | - | chr3_4:71517837-71517856 | Msa0519450:intron | 30.0% |
| GTGTCAGTTATATAAAGCAA+AGG | + | chr3_4:71517929-71517948 | None:intergenic | 30.0% | |
| TTGAATGTAATCACATGTGT+CGG | + | chr3_4:71517973-71517992 | None:intergenic | 30.0% | |
| AAACCACAAGACATAAAGTA+TGG | - | chr3_4:71518148-71518167 | Msa0519450:intron | 30.0% | |
| AGAGAAGAGATTTCAACTTT+CGG | + | chr3_4:71518216-71518235 | None:intergenic | 30.0% | |
| ! | GTTTCCAGGTTAAAGTTTTT+AGG | + | chr3_4:71518267-71518286 | None:intergenic | 30.0% |
| TAGAAGAGAAGAAATACATC+AGG | - | chr3_4:71518393-71518412 | Msa0519450:intron | 30.0% | |
| AGAAGAGAAGAAATACATCA+GGG | - | chr3_4:71518394-71518413 | Msa0519450:intron | 30.0% | |
| TTGATGCATTACAAGAAAAC+AGG | + | chr3_4:71518875-71518894 | None:intergenic | 30.0% | |
| TGATTCAAGATTGAGATTGT+GGG | - | chr3_4:71518957-71518976 | Msa0519450:CDS | 30.0% | |
| TGAGTTGTAGCTAATTGAAT+AGG | + | chr3_4:71519045-71519064 | None:intergenic | 30.0% | |
| !!! | TTTCTTTTGAAGCATCAAAG+AGG | - | chr3_4:71519178-71519197 | Msa0519450:intron | 30.0% |
| AATCAAATATAAAGTGCACG+AGG | - | chr3_4:71519202-71519221 | Msa0519450:intron | 30.0% | |
| ATCAAATATAAAGTGCACGA+GGG | - | chr3_4:71519203-71519222 | Msa0519450:intron | 30.0% | |
| TTAGTTACTTAGTGGTTGAT+GGG | + | chr3_4:71519247-71519266 | None:intergenic | 30.0% | |
| ATTAGTTACTTAGTGGTTGA+TGG | + | chr3_4:71519248-71519267 | None:intergenic | 30.0% | |
| ATCTCACTTCTTGATTATTC+AGG | - | chr3_4:71519294-71519313 | Msa0519450:intron | 30.0% | |
| TTATTCAGGCATTTGATATG+TGG | - | chr3_4:71519308-71519327 | Msa0519450:intron | 30.0% | |
| AACTCATCATCTTACTATGT+AGG | + | chr3_4:71520050-71520069 | None:intergenic | 30.0% | |
| ! | GTAAAACTATTTTACACCGT+CGG | - | chr3_4:71520086-71520105 | Msa0519450:intron | 30.0% |
| TAAATTGAGATCCATATCTG+GGG | + | chr3_4:71520175-71520194 | None:intergenic | 30.0% | |
| CTTAAATTGAGATCCATATC+TGG | + | chr3_4:71520177-71520196 | None:intergenic | 30.0% | |
| ATATCATTCTCCAATCCTAT+TGG | - | chr3_4:71520222-71520241 | Msa0519450:intron | 30.0% | |
| ATACTTCAATCCAATAGGAT+TGG | + | chr3_4:71520235-71520254 | None:intergenic | 30.0% | |
| GTTCAATACTTCAATCCAAT+AGG | + | chr3_4:71520240-71520259 | None:intergenic | 30.0% | |
| !!! | ATTTTGTTATTGCCTGTCAT+AGG | - | chr3_4:71520316-71520335 | Msa0519450:intron | 30.0% |
| ACGATAGACAAATTCTTGTA+TGG | - | chr3_4:71520357-71520376 | Msa0519450:CDS | 30.0% | |
| GAAAACATGTGCACAAATAA+AGG | + | chr3_4:71520555-71520574 | None:intergenic | 30.0% | |
| CTGCACACCAATTATAAATT+AGG | + | chr3_4:71520577-71520596 | None:intergenic | 30.0% | |
| ! | GTTTGTATTTTGCATGTTTG+TGG | - | chr3_4:71520596-71520615 | Msa0519450:CDS | 30.0% |
| ! | TGTGTAAATAAGGTTTGTTC+TGG | - | chr3_4:71520621-71520640 | Msa0519450:CDS | 30.0% |
| !!! | AATAAGGTTTGTTCTGGTTT+TGG | - | chr3_4:71520627-71520646 | Msa0519450:CDS | 30.0% |
| AATTCTACCTACAAAAGCAA+TGG | + | chr3_4:71520705-71520724 | None:intergenic | 30.0% | |
| CAAAGTCTACAAGATGAAAA+AGG | + | chr3_4:71520735-71520754 | None:intergenic | 30.0% | |
| !! | CTTTTTCATCTTGTAGACTT+TGG | - | chr3_4:71520733-71520752 | Msa0519450:exon | 30.0% |
| ATTGTCTGTACCCAAAAAAA+AGG | - | chr3_4:71520847-71520866 | Msa0519450:five_prime_UTR | 30.0% | |
| ACAAAGGTTGTTGCTATATC+TGG | + | chr3_4:71514361-71514380 | None:intergenic | 35.0% | |
| ATTCAAAGATGCTCCGAATA+TGG | - | chr3_4:71514412-71514431 | Msa0519450:three_prime_UTR | 35.0% | |
| AACATCAAAGACAGAGAATC+CGG | - | chr3_4:71514446-71514465 | Msa0519450:three_prime_UTR | 35.0% | |
| ! | TGATTTTATGCGATTAGCGA+AGG | + | chr3_4:71514489-71514508 | None:intergenic | 35.0% |
| AATTAATGGCACCTTTGTGA+GGG | + | chr3_4:71514559-71514578 | None:intergenic | 35.0% | |
| ATTTGGTATCCCATTGATAC+TGG | - | chr3_4:71514764-71514783 | Msa0519450:CDS | 35.0% | |
| !! | GATACTGGTTTATTCATCAC+CGG | - | chr3_4:71514779-71514798 | Msa0519450:CDS | 35.0% |
| CACACTATCACGATAATGAT+AGG | + | chr3_4:71514863-71514882 | None:intergenic | 35.0% | |
| ! | CGTGATAGTGTGTATATGTT+TGG | - | chr3_4:71514871-71514890 | Msa0519450:intron | 35.0% |
| GATACATTCATCAACAAAGG+TGG | + | chr3_4:71515005-71515024 | None:intergenic | 35.0% | |
| GCAGATACATTCATCAACAA+AGG | + | chr3_4:71515008-71515027 | None:intergenic | 35.0% | |
| TGTAAATTGATTGTAGGTGG+TGG | - | chr3_4:71515187-71515206 | Msa0519450:intron | 35.0% | |
| GAATTTCAAAATGCCTGGAA+AGG | - | chr3_4:71515211-71515230 | Msa0519450:intron | 35.0% | |
| TTCCAACATACTCATTTGTG+TGG | - | chr3_4:71515392-71515411 | Msa0519450:intron | 35.0% | |
| GGTCTTTACTAGTATGAACT+TGG | + | chr3_4:71515461-71515480 | None:intergenic | 35.0% | |
| TATACGAACCAGCAACATAT+AGG | - | chr3_4:71515697-71515716 | Msa0519450:intron | 35.0% | |
| AAGAATCAACCCCTTAATTC+TGG | - | chr3_4:71515804-71515823 | Msa0519450:CDS | 35.0% | |
| TTATGACATACTGAGAACTG+AGG | - | chr3_4:71515975-71515994 | Msa0519450:intron | 35.0% | |
| !! | TGATGGTGCAATACGTTTTT+GGG | - | chr3_4:71516145-71516164 | Msa0519450:CDS | 35.0% |
| !!! | CAATACGTTTTTGGGACATA+AGG | - | chr3_4:71516153-71516172 | Msa0519450:CDS | 35.0% |
| TTTGATTCCTGTGGGTAATA+AGG | + | chr3_4:71516393-71516412 | None:intergenic | 35.0% | |
| GGATGTAATTTCTGCTTCAT+TGG | + | chr3_4:71516501-71516520 | None:intergenic | 35.0% | |
| ATGAAGCAGAAATTACATCC+AGG | - | chr3_4:71516501-71516520 | Msa0519450:intron | 35.0% | |
| AGAGAAATGTCTCTTATCTG+AGG | - | chr3_4:71517066-71517085 | Msa0519450:intron | 35.0% | |
| GTCAAATAGGTGCTTAGATA+TGG | - | chr3_4:71517427-71517446 | Msa0519450:intron | 35.0% | |
| ATGCATGTGTTATATAGCAC+TGG | + | chr3_4:71517725-71517744 | None:intergenic | 35.0% | |
| ATGGTATGTTCAGTATTAGC+AGG | + | chr3_4:71517810-71517829 | None:intergenic | 35.0% | |
| GCAATGCATTCAAATTGCTA+CGG | - | chr3_4:71517888-71517907 | Msa0519450:intron | 35.0% | |
| CAATGCATTCAAATTGCTAC+GGG | - | chr3_4:71517889-71517908 | Msa0519450:intron | 35.0% | |
| AAATTGCTACGGGTAATCAA+GGG | - | chr3_4:71517899-71517918 | Msa0519450:intron | 35.0% | |
| AGACCATACTTTATGTCTTG+TGG | + | chr3_4:71518154-71518173 | None:intergenic | 35.0% | |
| CAAGACATAAAGTATGGTCT+TGG | - | chr3_4:71518154-71518173 | Msa0519450:intron | 35.0% | |
| AGAAGAGATTTCAACTTTCG+GGG | + | chr3_4:71518214-71518233 | None:intergenic | 35.0% | |
| GAGAAGAGATTTCAACTTTC+GGG | + | chr3_4:71518215-71518234 | None:intergenic | 35.0% | |
| AGTCATAGGCAGACTTTATT+TGG | - | chr3_4:71518239-71518258 | Msa0519450:intron | 35.0% | |
| TCCAATCGGTAATATAATCG+AGG | - | chr3_4:71518321-71518340 | Msa0519450:intron | 35.0% | |
| ACCTCGATTATATTACCGAT+TGG | + | chr3_4:71518325-71518344 | None:intergenic | 35.0% | |
| !! | TAATCGAGGTTCTGAAAAGT+AGG | - | chr3_4:71518335-71518354 | Msa0519450:intron | 35.0% |
| CTGATTCAAGATTGAGATTG+TGG | - | chr3_4:71518956-71518975 | Msa0519450:CDS | 35.0% | |
| CATGCATGGAACAAAAATGA+CGG | + | chr3_4:71519076-71519095 | None:intergenic | 35.0% | |
| !! | TCATTTTTGTTCCATGCATG+AGG | - | chr3_4:71519076-71519095 | Msa0519450:intron | 35.0% |
| ! | CATTTTTGTTCCATGCATGA+GGG | - | chr3_4:71519077-71519096 | Msa0519450:intron | 35.0% |
| ! | ATCTTGTTGATTAAACCAGC+AGG | + | chr3_4:71519383-71519402 | None:intergenic | 35.0% |
| CTGGTTTAATCAACAAGATC+AGG | - | chr3_4:71519384-71519403 | Msa0519450:intron | 35.0% | |
| ! | TTTTTCCCTGCTCTGTTATA+AGG | - | chr3_4:71519434-71519453 | Msa0519450:intron | 35.0% |
| ! | TTTTCCCTGCTCTGTTATAA+GGG | - | chr3_4:71519435-71519454 | Msa0519450:intron | 35.0% |
| TAACTGTAAAATGAACACGC+CGG | + | chr3_4:71519499-71519518 | None:intergenic | 35.0% | |
| TAATCAACTCATTCAGCGTA+TGG | - | chr3_4:71519541-71519560 | Msa0519450:intron | 35.0% | |
| TGTAAACAAGAAAAAGGGGA+AGG | + | chr3_4:71519580-71519599 | None:intergenic | 35.0% | |
| AACAGTGAAATTAGAATGGG+AGG | + | chr3_4:71519609-71519628 | None:intergenic | 35.0% | |
| !! | GTAAAATCAGTCGGTTTTTG+TGG | + | chr3_4:71519915-71519934 | None:intergenic | 35.0% |
| TATTAATGCTCGTTCTTCCA+AGG | - | chr3_4:71519949-71519968 | Msa0519450:intron | 35.0% | |
| ACTATGTAGGCCTACTTTAA+TGG | + | chr3_4:71520037-71520056 | None:intergenic | 35.0% | |
| GTAAGATGATGAGTTCCTAT+TGG | - | chr3_4:71520055-71520074 | Msa0519450:intron | 35.0% | |
| !! | TACTGGTTGTTATTTCATCC+TGG | + | chr3_4:71520140-71520159 | None:intergenic | 35.0% |
| AAATAGGTGCACCATTTCAT+CGG | + | chr3_4:71520402-71520421 | None:intergenic | 35.0% | |
| TATCACAAGGTCAGACATAT+TGG | + | chr3_4:71520476-71520495 | None:intergenic | 35.0% | |
| GTTTGTGGGATGTGTAAATA+AGG | - | chr3_4:71520611-71520630 | Msa0519450:CDS | 35.0% | |
| AAGAGCAGAATTCTACGAAG+TGG | - | chr3_4:71514238-71514257 | Msa0519450:three_prime_UTR | 40.0% | |
| ! | GAACTCAAGTGGACTCAAAT+GGG | + | chr3_4:71514274-71514293 | None:intergenic | 40.0% |
| TTGTTGCTATATCTGGTGAG+TGG | + | chr3_4:71514354-71514373 | None:intergenic | 40.0% | |
| ATGCTCCGAATATGGATACA+TGG | - | chr3_4:71514420-71514439 | Msa0519450:three_prime_UTR | 40.0% | |
| ! | GGAATTTGGACGCAATTTTC+CGG | + | chr3_4:71514468-71514487 | None:intergenic | 40.0% |
| ATGCGATTAGCGAAGGAATT+TGG | + | chr3_4:71514482-71514501 | None:intergenic | 40.0% | |
| ATTAATGGCACCTTTGTGAG+GGG | + | chr3_4:71514558-71514577 | None:intergenic | 40.0% | |
| GAATTAATGGCACCTTTGTG+AGG | + | chr3_4:71514560-71514579 | None:intergenic | 40.0% | |
| ACGCTGTATCTTCAGCTATT+TGG | - | chr3_4:71514747-71514766 | Msa0519450:intron | 40.0% | |
| GTGGTGAATTTCAAAATGCC+TGG | - | chr3_4:71515206-71515225 | Msa0519450:intron | 40.0% | |
| TCTCATACACTTATTGCTGC+AGG | - | chr3_4:71515266-71515285 | Msa0519450:intron | 40.0% | |
| CGTCTTTGTGATATTGCTTC+TGG | - | chr3_4:71515308-71515327 | Msa0519450:intron | 40.0% | |
| GCATTTGCTCATACTTTGTC+TGG | - | chr3_4:71515332-71515351 | Msa0519450:intron | 40.0% | |
| GACCACACAAATGAGTATGT+TGG | + | chr3_4:71515397-71515416 | None:intergenic | 40.0% | |
| TGTCTGCGTAATCTTAGACT+CGG | + | chr3_4:71515482-71515501 | None:intergenic | 40.0% | |
| ! | AGTCTAAGATTACGCAGACA+AGG | - | chr3_4:71515482-71515501 | Msa0519450:intron | 40.0% |
| ! | GTCTAAGATTACGCAGACAA+GGG | - | chr3_4:71515483-71515502 | Msa0519450:intron | 40.0% |
| ! | ATTCTAAAAACTTTGGGGGG+TGG | + | chr3_4:71515622-71515641 | None:intergenic | 40.0% |
| CACTCAAACCTATATGTTGC+TGG | + | chr3_4:71515708-71515727 | None:intergenic | 40.0% | |
| CAACATATAGGTTTGAGTGC+TGG | - | chr3_4:71515709-71515728 | Msa0519450:intron | 40.0% | |
| !!! | TCCTTATTTTTCCTCGTGCA+AGG | - | chr3_4:71515750-71515769 | Msa0519450:intron | 40.0% |
| TCCTTGCACGAGGAAAAATA+AGG | + | chr3_4:71515754-71515773 | None:intergenic | 40.0% | |
| AGCGCCATTATGTTAAGCAT+TGG | + | chr3_4:71515865-71515884 | None:intergenic | 40.0% | |
| TCTATCTAGTCACCTATCAG+TGG | + | chr3_4:71515949-71515968 | None:intergenic | 40.0% | |
| ATGGTGTAATGACCGTTGAA+TGG | - | chr3_4:71516084-71516103 | Msa0519450:CDS | 40.0% | |
| ACTTGAAGCAGACCATTCAA+CGG | + | chr3_4:71516099-71516118 | None:intergenic | 40.0% | |
| AATGGTCTGCTTCAAGTGAA+TGG | - | chr3_4:71516102-71516121 | Msa0519450:CDS | 40.0% | |
| ATGGTCTGCTTCAAGTGAAT+GGG | - | chr3_4:71516103-71516122 | Msa0519450:CDS | 40.0% | |
| AGTGAATGGGTCTTGATTAC+CGG | - | chr3_4:71516116-71516135 | Msa0519450:CDS | 40.0% | |
| !! | GTGATGGTGCAATACGTTTT+TGG | - | chr3_4:71516144-71516163 | Msa0519450:CDS | 40.0% |
| TTGGCAACTTTCTTCTGTAC+AGG | + | chr3_4:71516429-71516448 | None:intergenic | 40.0% | |
| GTACAGAAGAAAGTTGCCAA+TGG | - | chr3_4:71516429-71516448 | Msa0519450:intron | 40.0% | |
| AAGAAAGTTGCCAATGGAAG+TGG | - | chr3_4:71516435-71516454 | Msa0519450:intron | 40.0% | |
| TTAGATGATAGCCTGCCAAT+TGG | + | chr3_4:71516474-71516493 | None:intergenic | 40.0% | |
| AATTGGCAGGCTATCATCTA+AGG | - | chr3_4:71516473-71516492 | Msa0519450:intron | 40.0% | |
| ATTGGCAGGCTATCATCTAA+GGG | - | chr3_4:71516474-71516493 | Msa0519450:intron | 40.0% | |
| TCCAGGAATGATTTCTACTC+AGG | - | chr3_4:71516518-71516537 | Msa0519450:intron | 40.0% | |
| TCCTGAGTAGAAATCATTCC+TGG | + | chr3_4:71516522-71516541 | None:intergenic | 40.0% | |
| GACAGGATTGAAAGTAACAG+AGG | - | chr3_4:71516569-71516588 | Msa0519450:intron | 40.0% | |
| GGATTGAAAGTAACAGAGGA+TGG | - | chr3_4:71516573-71516592 | Msa0519450:intron | 40.0% | |
| ! | CATGGGTCTATTGACTAGTA+TGG | + | chr3_4:71516637-71516656 | None:intergenic | 40.0% |
| TATGCACAACGTCTTGTACA+AGG | - | chr3_4:71516658-71516677 | Msa0519450:intron | 40.0% | |
| AGTTACCCTATCAATACCAC+CGG | + | chr3_4:71516811-71516830 | None:intergenic | 40.0% | |
| !! | TGTGTTGATTAGGAGCAGTT+AGG | - | chr3_4:71516902-71516921 | Msa0519450:intron | 40.0% |
| ! | TATTGATTAGGAGCGGTTAC+AGG | - | chr3_4:71516944-71516963 | Msa0519450:intron | 40.0% |
| !!! | TTTTGCTCTGGGATTACAGA+GGG | - | chr3_4:71517092-71517111 | Msa0519450:intron | 40.0% |
| ATAGGTGCTTAGATATGGGA+CGG | - | chr3_4:71517432-71517451 | Msa0519450:intron | 40.0% | |
| CAAATTGCTACGGGTAATCA+AGG | - | chr3_4:71517898-71517917 | Msa0519450:intron | 40.0% | |
| AATTGCTACGGGTAATCAAG+GGG | - | chr3_4:71517900-71517919 | Msa0519450:intron | 40.0% | |
| ATTATTACCAGTGTCGTGTC+CGG | - | chr3_4:71518010-71518029 | Msa0519450:intron | 40.0% | |
| GGACCCTAAAAACTTTAACC+TGG | - | chr3_4:71518260-71518279 | Msa0519450:intron | 40.0% | |
| ACTGTGTCTATATGGTTTCC+AGG | + | chr3_4:71518281-71518300 | None:intergenic | 40.0% | |
| GACGATTCACTGTGTCTATA+TGG | + | chr3_4:71518289-71518308 | None:intergenic | 40.0% | |
| AGAGAAGAAATACATCAGGG+CGG | - | chr3_4:71518397-71518416 | Msa0519450:intron | 40.0% | |
| CAAAAATGCTAAGAGCAGCT+TGG | - | chr3_4:71518660-71518679 | Msa0519450:CDS | 40.0% | |
| ATTTCACTCTCCCTCATTGA+TGG | - | chr3_4:71518915-71518934 | Msa0519450:CDS | 40.0% | |
| ATCAGACAGACCATCAATGA+GGG | + | chr3_4:71518928-71518947 | None:intergenic | 40.0% | |
| ! | TAGGTTTGCTTGTTTGCAAG+CGG | + | chr3_4:71519026-71519045 | None:intergenic | 40.0% |
| ATGAGGGTTGTGAAAGTAAG+CGG | - | chr3_4:71519093-71519112 | Msa0519450:intron | 40.0% | |
| AGGCATTTGATATGTGGTCT+GGG | - | chr3_4:71519314-71519333 | Msa0519450:intron | 40.0% | |
| ATGAGTCTATAAACTCCTGC+TGG | - | chr3_4:71519365-71519384 | Msa0519450:intron | 40.0% | |
| TTTCCCTGCTCTGTTATAAG+GGG | - | chr3_4:71519436-71519455 | Msa0519450:intron | 40.0% | |
| TTATAAGGGGTCAGTCAAAG+TGG | - | chr3_4:71519449-71519468 | Msa0519450:intron | 40.0% | |
| ! | TCAAAGTGGTGGAATCTGTT+TGG | - | chr3_4:71519463-71519482 | Msa0519450:intron | 40.0% |
| !! | CTGAATGAGTTGATTAGAGC+AGG | + | chr3_4:71519537-71519556 | None:intergenic | 40.0% |
| GAAAAAGGGGAAGGAAAGTA+AGG | + | chr3_4:71519571-71519590 | None:intergenic | 40.0% | |
| TGGAAAGAGATACAGACACA+AGG | - | chr3_4:71519644-71519663 | Msa0519450:intron | 40.0% | |
| GAAGAATAGAGACCTGAATG+AGG | - | chr3_4:71519734-71519753 | Msa0519450:intron | 40.0% | |
| GCTCACATTGGATCATTGAT+TGG | + | chr3_4:71519874-71519893 | None:intergenic | 40.0% | |
| !! | AAATCAGTCGGTTTTTGTGG+CGG | + | chr3_4:71519912-71519931 | None:intergenic | 40.0% |
| GACTTCTCGGTAAAATCAGT+CGG | + | chr3_4:71519924-71519943 | None:intergenic | 40.0% | |
| TAGGGTTCATTCAATGACCT+TGG | + | chr3_4:71519969-71519988 | None:intergenic | 40.0% | |
| GTCATTGAATGAACCCTAAG+AGG | - | chr3_4:71519971-71519990 | Msa0519450:intron | 40.0% | |
| GATGAGTTCCTATTGGATGA+CGG | - | chr3_4:71520062-71520081 | Msa0519450:intron | 40.0% | |
| ! | GTTTTACACCGTCATCCAAT+AGG | + | chr3_4:71520073-71520092 | None:intergenic | 40.0% |
| AAGGTCAATTGCCGATGAAA+TGG | - | chr3_4:71520388-71520407 | Msa0519450:CDS | 40.0% | |
| ACAAGGTCAGACATATTGGA+AGG | + | chr3_4:71520472-71520491 | None:intergenic | 40.0% | |
| TGACCTTGTGATAAACTGCA+GGG | - | chr3_4:71520483-71520502 | Msa0519450:CDS | 40.0% | |
| !! | GTGTAGTCCATTGCTTTTGT+AGG | - | chr3_4:71520695-71520714 | Msa0519450:CDS | 40.0% |
| ! | GGAACTCAAGTGGACTCAAA+TGG | + | chr3_4:71514275-71514294 | None:intergenic | 45.0% |
| TTTGAGTCCACTTGAGTTCC+AGG | - | chr3_4:71514275-71514294 | Msa0519450:three_prime_UTR | 45.0% | |
| TCTGGTGAGTGGTGATACTA+CGG | + | chr3_4:71514343-71514362 | None:intergenic | 45.0% | |
| AGGATTGAAGAGAACCTGAG+TGG | + | chr3_4:71514843-71514862 | None:intergenic | 45.0% | |
| ! | GCAGTCTTATACACCTTTCC+AGG | + | chr3_4:71515227-71515246 | None:intergenic | 45.0% |
| ACTTATTGCTGCAGGAACTG+AGG | - | chr3_4:71515274-71515293 | Msa0519450:intron | 45.0% | |
| CATACTTTGTCTGGTCATCG+TGG | - | chr3_4:71515341-71515360 | Msa0519450:intron | 45.0% | |
| ATCTAGTCACCTATCAGTGG+TGG | + | chr3_4:71515946-71515965 | None:intergenic | 45.0% | |
| GTGAATGGGTCTTGATTACC+GGG | - | chr3_4:71516117-71516136 | Msa0519450:CDS | 45.0% | |
| TGAATGGGTCTTGATTACCG+GGG | - | chr3_4:71516118-71516137 | Msa0519450:CDS | 45.0% | |
| AATCAATCTCAGACGCAGCT+TGG | - | chr3_4:71516200-71516219 | Msa0519450:intron | 45.0% | |
| CCTGTGGGTAATAAGGCTTT+AGG | + | chr3_4:71516386-71516405 | None:intergenic | 45.0% | |
| !! | CCTAAAGCCTTATTACCCAC+AGG | - | chr3_4:71516383-71516402 | Msa0519450:intron | 45.0% |
| GATCGTGCAACTGCTCATTA+TGG | - | chr3_4:71516540-71516559 | Msa0519450:intron | 45.0% | |
| GGCATGTATCTCTTAAGTGC+AGG | - | chr3_4:71516594-71516613 | Msa0519450:intron | 45.0% | |
| CAAGACGTTGTGCATAGCAT+GGG | + | chr3_4:71516654-71516673 | None:intergenic | 45.0% | |
| ACAAGACGTTGTGCATAGCA+TGG | + | chr3_4:71516655-71516674 | None:intergenic | 45.0% | |
| GGATACCTACCATACAAGGA+CGG | + | chr3_4:71516790-71516809 | None:intergenic | 45.0% | |
| GTCCTTGTATGGTAGGTATC+CGG | - | chr3_4:71516789-71516808 | Msa0519450:intron | 45.0% | |
| !! | AGGTATCCGGTGGTATTGAT+AGG | - | chr3_4:71516802-71516821 | Msa0519450:intron | 45.0% |
| !! | GGTATCCGGTGGTATTGATA+GGG | - | chr3_4:71516803-71516822 | Msa0519450:intron | 45.0% |
| TCTGAATTCCCCTACTGTTG+TGG | + | chr3_4:71517009-71517028 | None:intergenic | 45.0% | |
| CTCTCTGCCCAAAACCAATA+AGG | + | chr3_4:71517048-71517067 | None:intergenic | 45.0% | |
| ! | TATCTGAGGAGCTTTTGCTC+TGG | - | chr3_4:71517080-71517099 | Msa0519450:intron | 45.0% |
| ! | ATCTGAGGAGCTTTTGCTCT+GGG | - | chr3_4:71517081-71517100 | Msa0519450:intron | 45.0% |
| !!! | CTTTTGCTCTGGGATTACAG+AGG | - | chr3_4:71517091-71517110 | Msa0519450:intron | 45.0% |
| GGAGGCTTACATACAGTGTT+AGG | + | chr3_4:71517186-71517205 | None:intergenic | 45.0% | |
| AGACATCGGTGCATCTTTGT+TGG | - | chr3_4:71517697-71517716 | Msa0519450:intron | 45.0% | |
| ATGCATTGCAGACTGACAGA+AGG | + | chr3_4:71517877-71517896 | None:intergenic | 45.0% | |
| CTGAAGACACTATGAAGCAC+TGG | + | chr3_4:71518048-71518067 | None:intergenic | 45.0% | |
| CAGTGCTTCATAGTGTCTTC+AGG | - | chr3_4:71518046-71518065 | Msa0519450:intron | 45.0% | |
| GAGAAGAAATACATCAGGGC+GGG | - | chr3_4:71518398-71518417 | Msa0519450:intron | 45.0% | |
| AGAAGAAATACATCAGGGCG+GGG | - | chr3_4:71518399-71518418 | Msa0519450:intron | 45.0% | |
| TACAACAGTGTTGCCCTCAA+TGG | - | chr3_4:71518520-71518539 | Msa0519450:intron | 45.0% | |
| ACCTTAGCCAGTTCCATTGA+GGG | + | chr3_4:71518536-71518555 | None:intergenic | 45.0% | |
| TACCTTAGCCAGTTCCATTG+AGG | + | chr3_4:71518537-71518556 | None:intergenic | 45.0% | |
| CATCAGACAGACCATCAATG+AGG | + | chr3_4:71518929-71518948 | None:intergenic | 45.0% | |
| ! | TTGATGGTCTGTCTGATGAC+AGG | - | chr3_4:71518931-71518950 | Msa0519450:CDS | 45.0% |
| TGATGGTCTGTCTGATGACA+GGG | - | chr3_4:71518932-71518951 | Msa0519450:CDS | 45.0% | |
| AGATTGTGGGATGTTGAGTC+AGG | - | chr3_4:71518970-71518989 | Msa0519450:CDS | 45.0% | |
| ACTTTCACAACCCTCATGCA+TGG | + | chr3_4:71519090-71519109 | None:intergenic | 45.0% | |
| !! | AGTGGTTGATGGGTGGAATT+GGG | + | chr3_4:71519237-71519256 | None:intergenic | 45.0% |
| !! | TAGTGGTTGATGGGTGGAAT+TGG | + | chr3_4:71519238-71519257 | None:intergenic | 45.0% |
| !! | GTTACTTAGTGGTTGATGGG+TGG | + | chr3_4:71519244-71519263 | None:intergenic | 45.0% |
| CAGGCATTTGATATGTGGTC+TGG | - | chr3_4:71519313-71519332 | Msa0519450:intron | 45.0% | |
| GATCAGGTATGTTCAACAGC+TGG | - | chr3_4:71519400-71519419 | Msa0519450:intron | 45.0% | |
| TGACCCCTTATAACAGAGCA+GGG | + | chr3_4:71519442-71519461 | None:intergenic | 45.0% | |
| !! | TCTGTTTGGTTTGTCAGCTC+CGG | - | chr3_4:71519477-71519496 | Msa0519450:intron | 45.0% |
| CAACTCATTCAGCGTATGGA+TGG | - | chr3_4:71519545-71519564 | Msa0519450:intron | 45.0% | |
| TTGTGTGTGCATGTCGTCTT+CGG | - | chr3_4:71519677-71519696 | Msa0519450:intron | 45.0% | |
| GTTTAATGGCTATGCACCGA+CGG | + | chr3_4:71520105-71520124 | None:intergenic | 45.0% | |
| CTGTGTACAACTCCTATGAC+AGG | + | chr3_4:71520331-71520350 | None:intergenic | 45.0% | |
| CTGTCATAGGAGTTGTACAC+AGG | - | chr3_4:71520329-71520348 | Msa0519450:CDS | 45.0% | |
| TCATAGGAGTTGTACACAGG+TGG | - | chr3_4:71520332-71520351 | Msa0519450:CDS | 45.0% | |
| CTGACCTTGTGATAAACTGC+AGG | - | chr3_4:71520482-71520501 | Msa0519450:CDS | 45.0% | |
| CTCAGTTACTCCAGCTATTC+TGG | + | chr3_4:71520527-71520546 | None:intergenic | 45.0% | |
| !!! | ATTTTAATATATAGTTATTT+AGG | - | chr3_4:71516847-71516866 | Msa0519450:intron | 5.0% |
| !! | TATTATACAATAATATATTA+TGG | - | chr3_4:71518804-71518823 | Msa0519450:intron | 5.0% |
| CTTCACTCCTGGAACTCAAG+TGG | + | chr3_4:71514285-71514304 | None:intergenic | 50.0% | |
| CACTTGAGTTCCAGGAGTGA+AGG | - | chr3_4:71514283-71514302 | Msa0519450:three_prime_UTR | 50.0% | |
| TTGAGTTCCAGGAGTGAAGG+AGG | - | chr3_4:71514286-71514305 | Msa0519450:three_prime_UTR | 50.0% | |
| TCTTCTTCCTCCTTCACTCC+TGG | + | chr3_4:71514296-71514315 | None:intergenic | 50.0% | |
| GAAGAAGACGACGACGACTT+TGG | - | chr3_4:71514311-71514330 | Msa0519450:three_prime_UTR | 50.0% | |
| GAACTCGTTTCCCCTCACAA+AGG | - | chr3_4:71514545-71514564 | Msa0519450:three_prime_UTR | 50.0% | |
| TGCATCAGATGCATCCGTAG+CGG | - | chr3_4:71514622-71514641 | Msa0519450:exon | 50.0% | |
| GTGAACGTCGTAAACCGCTA+CGG | + | chr3_4:71514639-71514658 | None:intergenic | 50.0% | |
| TAGCGGTTTACGACGTTCAC+CGG | - | chr3_4:71514639-71514658 | Msa0519450:CDS | 50.0% | |
| CCATCTCCGTCGAAATCACT+CGG | + | chr3_4:71514665-71514684 | None:intergenic | 50.0% | |
| TTGGGACACTAACACCACTC+AGG | - | chr3_4:71514826-71514845 | Msa0519450:intron | 50.0% | |
| ! | TAGCGGATCGTCCTTAGAAC+CGG | - | chr3_4:71515587-71515606 | Msa0519450:intron | 50.0% |
| GCATTGGATGTTTGGCACAG+TGG | + | chr3_4:71515849-71515868 | None:intergenic | 50.0% | |
| TGTCAAGCTCCACCACTGAT+AGG | - | chr3_4:71515934-71515953 | Msa0519450:intron | 50.0% | |
| GAATGGGTCTTGATTACCGG+GGG | - | chr3_4:71516119-71516138 | Msa0519450:CDS | 50.0% | |
| TTGATTACCGGGGGTTGTGA+TGG | - | chr3_4:71516128-71516147 | Msa0519450:CDS | 50.0% | |
| TATTGCACCATCACAACCCC+CGG | + | chr3_4:71516138-71516157 | None:intergenic | 50.0% | |
| !!! | TTTTGGGACATAAGGCGTGC+TGG | - | chr3_4:71516161-71516180 | Msa0519450:CDS | 50.0% |
| ACGGAACGTTTGAGTAGAGG+TGG | + | chr3_4:71516233-71516252 | None:intergenic | 50.0% | |
| AGCACGGAACGTTTGAGTAG+AGG | + | chr3_4:71516236-71516255 | None:intergenic | 50.0% | |
| CAAACGTTCCGTGCTAACCA+AGG | - | chr3_4:71516241-71516260 | Msa0519450:intron | 50.0% | |
| ! | ATGTCCACTGCCACTTCCAT+TGG | + | chr3_4:71516448-71516467 | None:intergenic | 50.0% |
| !! | GCTCATTATGGTGCTGTGAC+AGG | - | chr3_4:71516552-71516571 | Msa0519450:intron | 50.0% |
| ATACTCCCTCCGTCCTTGTA+TGG | - | chr3_4:71516778-71516797 | Msa0519450:intron | 50.0% | |
| ACCTACCATACAAGGACGGA+GGG | + | chr3_4:71516786-71516805 | None:intergenic | 50.0% | |
| TACCTACCATACAAGGACGG+AGG | + | chr3_4:71516787-71516806 | None:intergenic | 50.0% | |
| CACCGGATACCTACCATACA+AGG | + | chr3_4:71516794-71516813 | None:intergenic | 50.0% | |
| CTTGTATGGTAGGTATCCGG+TGG | - | chr3_4:71516792-71516811 | Msa0519450:intron | 50.0% | |
| GCCATTTGGCCACAACAGTA+GGG | - | chr3_4:71516997-71517016 | Msa0519450:intron | 50.0% | |
| CCATTTGGCCACAACAGTAG+GGG | - | chr3_4:71516998-71517017 | Msa0519450:intron | 50.0% | |
| GTGCTTAGATATGGGACGGA+GGG | - | chr3_4:71517436-71517455 | Msa0519450:intron | 50.0% | |
| AGTGTTGCCCTCAATGGAAC+TGG | - | chr3_4:71518526-71518545 | Msa0519450:intron | 50.0% | |
| AACGCACGTACGATACTACG+TGG | - | chr3_4:71519337-71519356 | Msa0519450:intron | 50.0% | |
| CTGACCCCTTATAACAGAGC+AGG | + | chr3_4:71519443-71519462 | None:intergenic | 50.0% | |
| TAAGGGGTCAGTCAAAGTGG+TGG | - | chr3_4:71519452-71519471 | Msa0519450:intron | 50.0% | |
| TGGGGTAGTACAGCTCACAT+TGG | + | chr3_4:71519886-71519905 | None:intergenic | 50.0% | |
| !! | TGGGGCTAATGCTGCTTTAC+TGG | + | chr3_4:71520157-71520176 | None:intergenic | 50.0% |
| AGCAGCATTAGCCCCAGATA+TGG | - | chr3_4:71520161-71520180 | Msa0519450:intron | 50.0% | |
| TTCTTGTATGGTCGCCTGCA+AGG | - | chr3_4:71520369-71520388 | Msa0519450:CDS | 50.0% | |
| TCATCGGCAATTGACCTTGC+AGG | + | chr3_4:71520386-71520405 | None:intergenic | 50.0% | |
| TCGCCCTGCAGTTTATCACA+AGG | + | chr3_4:71520489-71520508 | None:intergenic | 50.0% | |
| TGTGATAAACTGCAGGGCGA+AGG | - | chr3_4:71520489-71520508 | Msa0519450:CDS | 50.0% | |
| ACTCCAGCTATTCTGGTCGT+CGG | + | chr3_4:71520520-71520539 | None:intergenic | 50.0% | |
| GACGACGACGACTTTGGTTG+TGG | - | chr3_4:71514317-71514336 | Msa0519450:three_prime_UTR | 55.0% | |
| CCGAGTGATTTCGACGGAGA+TGG | - | chr3_4:71514662-71514681 | Msa0519450:intron | 55.0% | |
| AGCGGATCGTCCTTAGAACC+GGG | - | chr3_4:71515588-71515607 | Msa0519450:intron | 55.0% | |
| GTTGCCAATGGAAGTGGCAG+TGG | - | chr3_4:71516441-71516460 | Msa0519450:intron | 55.0% | |
| GGCAGTGGACATCTGCCAAT+TGG | - | chr3_4:71516456-71516475 | Msa0519450:intron | 55.0% | |
| GTGGACATCTGCCAATTGGC+AGG | - | chr3_4:71516460-71516479 | Msa0519450:intron | 55.0% | |
| TCCCTCCGTCCTTGTATGGT+AGG | - | chr3_4:71516782-71516801 | Msa0519450:intron | 55.0% | |
| GGCCATTTGGCCACAACAGT+AGG | - | chr3_4:71516996-71517015 | Msa0519450:intron | 55.0% | |
| CCCCTACTGTTGTGGCCAAA+TGG | + | chr3_4:71517001-71517020 | None:intergenic | 55.0% | |
| GGTGCTTAGATATGGGACGG+AGG | - | chr3_4:71517435-71517454 | Msa0519450:intron | 55.0% | |
| ! | GCACTGGCATACACGAACAC+CGG | + | chr3_4:71518032-71518051 | None:intergenic | 55.0% |
| GCCCTCAATGGAACTGGCTA+AGG | - | chr3_4:71518532-71518551 | Msa0519450:intron | 55.0% | |
| ! | TCGGTTTTTGTGGCGGTGGT+GGG | + | chr3_4:71519905-71519924 | None:intergenic | 55.0% |
| !! | TCAGTCGGTTTTTGTGGCGG+TGG | + | chr3_4:71519909-71519928 | None:intergenic | 55.0% |
| ATCCCGACGACCAGAATAGC+TGG | - | chr3_4:71520514-71520533 | Msa0519450:CDS | 55.0% | |
| CTCCAGCTATTCTGGTCGTC+GGG | + | chr3_4:71520519-71520538 | None:intergenic | 55.0% | |
| GGAGCAGCTGTGAAACACGT+AGG | - | chr3_4:71520648-71520667 | Msa0519450:CDS | 55.0% | |
| CACCGGCCGAGTGATTTCGA+CGG | - | chr3_4:71514656-71514675 | Msa0519450:intron | 60.0% | |
| CTCCGTCGAAATCACTCGGC+CGG | + | chr3_4:71514661-71514680 | None:intergenic | 60.0% | |
| GCGGATCGTCCTTAGAACCG+GGG | - | chr3_4:71515589-71515608 | Msa0519450:intron | 60.0% | |
| CGGATCGTCCTTAGAACCGG+GGG | - | chr3_4:71515590-71515609 | Msa0519450:intron | 60.0% | |
| ACGAACACCGGACACGACAC+TGG | + | chr3_4:71518020-71518039 | None:intergenic | 60.0% | |
| ! | CGGTTTTTGTGGCGGTGGTG+GGG | + | chr3_4:71519904-71519923 | None:intergenic | 60.0% |
| !! | GTCGGTTTTTGTGGCGGTGG+TGG | + | chr3_4:71519906-71519925 | None:intergenic | 60.0% |
| GGCATGCACCCCCGGTTCTA+AGG | + | chr3_4:71515601-71515620 | None:intergenic | 65.0% | |
| TGGGGGGTGGCATGCACCCC+CGG | + | chr3_4:71515609-71515628 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 71514237 | 71520932 | 71514237 | ID=Msa0519450;Name=Msa0519450 |
| chr3_4 | mRNA | 71514237 | 71520932 | 71514237 | ID=Msa0519450-mRNA-1;Parent=Msa0519450;Name=Msa0519450-mRNA-1;_AED=0.05;_eAED=0.05;_QI=194|1|1|1|1|1|8|387|441 |
| chr3_4 | exon | 71514237 | 71514665 | 71514237 | ID=Msa0519450-mRNA-1:exon:19652;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71514760 | 71514831 | 71514760 | ID=Msa0519450-mRNA-1:exon:19651;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71515764 | 71515853 | 71515764 | ID=Msa0519450-mRNA-1:exon:19650;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71516062 | 71516216 | 71516062 | ID=Msa0519450-mRNA-1:exon:19649;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71518554 | 71518764 | 71518554 | ID=Msa0519450-mRNA-1:exon:19648;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71518907 | 71519085 | 71518907 | ID=Msa0519450-mRNA-1:exon:19647;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71519807 | 71519966 | 71519807 | ID=Msa0519450-mRNA-1:exon:19646;Parent=Msa0519450-mRNA-1 |
| chr3_4 | exon | 71520322 | 71520932 | 71520322 | ID=Msa0519450-mRNA-1:exon:19645;Parent=Msa0519450-mRNA-1 |
| chr3_4 | five_prime_UTR | 71520739 | 71520932 | 71520739 | ID=Msa0519450-mRNA-1:five_prime_utr;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71520322 | 71520738 | 71520322 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71519807 | 71519966 | 71519807 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71518907 | 71519085 | 71518907 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71518554 | 71518764 | 71518554 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71516062 | 71516216 | 71516062 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71515764 | 71515853 | 71515764 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71514760 | 71514831 | 71514760 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | CDS | 71514624 | 71514665 | 71514624 | ID=Msa0519450-mRNA-1:cds;Parent=Msa0519450-mRNA-1 |
| chr3_4 | three_prime_UTR | 71514237 | 71514623 | 71514237 | ID=Msa0519450-mRNA-1:three_prime_utr;Parent=Msa0519450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
