Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547330 | XP_003606401.1 | 94.588 | 388 | 6 | 2 | 1 | 375 | 1 | 386 | 0.0 | 759 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547330 | G7JPE3 | 94.588 | 388 | 6 | 2 | 1 | 375 | 1 | 386 | 0.0 | 759 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0147680 | Msa0547330 | 0.816232 | 6.150108e-52 | -8.615850e-47 |
| Msa0219800 | Msa0547330 | 0.815880 | 7.369593e-52 | -8.615850e-47 |
| Msa0375860 | Msa0547330 | 0.808233 | 3.425337e-50 | -8.615850e-47 |
| Msa0391600 | Msa0547330 | 0.800132 | 1.663731e-48 | -8.615850e-47 |
| Msa0393820 | Msa0547330 | 0.822017 | 2.966928e-53 | -8.615850e-47 |
| Msa0396860 | Msa0547330 | 0.809664 | 1.692285e-50 | -8.615850e-47 |
| Msa0471390 | Msa0547330 | 0.809000 | 2.349258e-50 | -8.615850e-47 |
| Msa0523720 | Msa0547330 | 0.806098 | 9.699341e-50 | -8.615850e-47 |
| Msa0547330 | Msa0602050 | 0.854459 | 1.213836e-61 | -8.615850e-47 |
| Msa0547330 | Msa0622880 | 0.809702 | 1.660586e-50 | -8.615850e-47 |
| Msa0547330 | Msa0643190 | 0.926437 | 4.694291e-91 | -8.615850e-47 |
| Msa0547330 | Msa0854840 | 0.812133 | 4.942953e-51 | -8.615850e-47 |
| Msa0547330 | Msa0987640 | 0.800748 | 1.245744e-48 | -8.615850e-47 |
| Msa0547330 | Msa1002820 | 0.831488 | 1.622305e-55 | -8.615850e-47 |
| Msa0547330 | Msa1041910 | 0.803920 | 2.768376e-49 | -8.615850e-47 |
| Msa0547330 | Msa1061670 | 0.801137 | 1.037785e-48 | -8.615850e-47 |
| Msa0547330 | Msa1167960 | 0.816653 | 4.949777e-52 | -8.615850e-47 |
| Msa0547330 | Msa1323030 | 0.806310 | 8.751100e-50 | -8.615850e-47 |
| Msa0547330 | Msa1377200 | 0.804387 | 2.214115e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547330 | MtrunA17_Chr4g0029271 | 94.588 | 388 | 6 | 2 | 1 | 375 | 1 | 386 | 0.0 | 759 |
| Msa0547330 | MtrunA17_Chr4g0029291 | 90.196 | 306 | 29 | 1 | 70 | 375 | 91 | 395 | 0.0 | 567 |
| Msa0547330 | MtrunA17_Chr2g0318341 | 47.018 | 285 | 145 | 4 | 94 | 375 | 41 | 322 | 4.72e-97 | 292 |
| Msa0547330 | MtrunA17_Chr2g0318311 | 46.667 | 285 | 146 | 4 | 94 | 375 | 41 | 322 | 3.49e-94 | 285 |
| Msa0547330 | MtrunA17_Chr8g0360691 | 47.037 | 270 | 139 | 3 | 94 | 362 | 41 | 307 | 7.94e-89 | 271 |
| Msa0547330 | MtrunA17_Chr2g0292811 | 43.774 | 265 | 138 | 4 | 103 | 362 | 36 | 294 | 1.42e-76 | 239 |
| Msa0547330 | MtrunA17_Chr2g0287361 | 43.019 | 265 | 140 | 4 | 103 | 362 | 37 | 295 | 6.49e-76 | 238 |
| Msa0547330 | MtrunA17_Chr2g0292801 | 42.379 | 269 | 135 | 4 | 94 | 362 | 309 | 557 | 8.06e-73 | 237 |
| Msa0547330 | MtrunA17_Chr2g0292821 | 42.007 | 269 | 136 | 4 | 94 | 362 | 309 | 557 | 1.72e-71 | 234 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0547330 | AT5G60520.1 | 69.205 | 302 | 93 | 0 | 62 | 363 | 27 | 328 | 2.29e-156 | 443 |
| Msa0547330 | AT5G60530.1 | 63.323 | 319 | 116 | 1 | 46 | 363 | 111 | 429 | 6.54e-155 | 443 |
| Msa0547330 | AT4G27400.1 | 42.808 | 292 | 160 | 5 | 85 | 372 | 28 | 316 | 1.21e-90 | 276 |
| Msa0547330 | AT5G54370.1 | 42.500 | 280 | 154 | 4 | 94 | 372 | 36 | 309 | 3.73e-86 | 265 |
| Msa0547330 | AT1G54890.1 | 44.086 | 279 | 149 | 5 | 94 | 368 | 42 | 317 | 5.91e-86 | 264 |
| Msa0547330 | AT3G19430.1 | 42.456 | 285 | 145 | 6 | 81 | 362 | 258 | 526 | 1.43e-75 | 244 |
| Msa0547330 | AT3G19430.2 | 42.456 | 285 | 145 | 6 | 81 | 362 | 281 | 549 | 1.68e-75 | 244 |
Find 92 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGTTCTTCTTTGGCTTCC+TGG | 0.127198 | 4_1:-40253198 | None:intergenic |
| TTGACTCTCTTACAGTAAAA+TGG | 0.170606 | 4_1:+40254132 | Msa0547330:CDS |
| TTATCTTTCTTGTTCTTCTT+TGG | 0.195002 | 4_1:-40253206 | None:intergenic |
| GAATTCGTCGTCTGAAACTA+TGG | 0.198715 | 4_1:-40253970 | None:intergenic |
| TAATTTGATGATTCCTCTTT+TGG | 0.202224 | 4_1:-40253074 | None:intergenic |
| AGTGTTAGAGTCACAGTTTC+TGG | 0.225553 | 4_1:+40254254 | Msa0547330:CDS |
| GTTTATCTTACTTCTCTCTA+TGG | 0.333386 | 4_1:+40252914 | Msa0547330:CDS |
| TTGAAAAGAGAGATGGAGTT+TGG | 0.337740 | 4_1:-40254505 | None:intergenic |
| CAATGAAGTGTGCGTTGATT+TGG | 0.340778 | 4_1:-40253992 | None:intergenic |
| TATGGCAAAGTTTCCTCCTT+TGG | 0.343897 | 4_1:-40253952 | None:intergenic |
| AGTTTCTGGTTTGCTTGAAA+TGG | 0.354070 | 4_1:+40254268 | Msa0547330:CDS |
| ATTCCATTGAGTTACTCTAT+TGG | 0.373593 | 4_1:-40254102 | None:intergenic |
| TTGTCTTCTCCTCCCATCAT+TGG | 0.383781 | 4_1:-40254479 | None:intergenic |
| CGTTACCATTACCATTTCCT+TGG | 0.391236 | 4_1:-40252956 | None:intergenic |
| AATCCTACAGATTCTATTGA+AGG | 0.405188 | 4_1:+40254395 | Msa0547330:CDS |
| GACATAAGGGTAAGACCTAT+TGG | 0.405265 | 4_1:+40254290 | Msa0547330:CDS |
| AAGAAGAACAAGAAAGATAA+AGG | 0.413234 | 4_1:+40253209 | Msa0547330:CDS |
| CTTCATTGGTACTCGGCCTC+AGG | 0.419986 | 4_1:+40254007 | Msa0547330:CDS |
| GAAGGCAAGGAGAAAGGAAA+AGG | 0.426860 | 4_1:+40253014 | Msa0547330:CDS |
| GTTTGCTTGAAATGGACATA+AGG | 0.432171 | 4_1:+40254276 | Msa0547330:CDS |
| CTTGGCTAGTGGAAGGCCTC+TGG | 0.435290 | 4_1:-40254550 | None:intergenic |
| CAAATCAACGCACACTTCAT+TGG | 0.436180 | 4_1:+40253993 | Msa0547330:CDS |
| TGCTACGATCCTCGCTTTGT+TGG | 0.444194 | 4_1:+40253897 | Msa0547330:CDS |
| CCTCGCTTTGTTGGTGGAGA+CGG | 0.444632 | 4_1:+40253906 | Msa0547330:CDS |
| AGGAATTGCTATGCCAATGA+TGG | 0.444976 | 4_1:+40254466 | Msa0547330:CDS |
| GGTAAGACCTATTGGAGAAA+AGG | 0.448306 | 4_1:+40254298 | Msa0547330:CDS |
| CGGTAACAATGGAAATGGTA+AGG | 0.455538 | 4_1:+40252977 | Msa0547330:CDS |
| CAACAACATGCAAACTCTGC+AGG | 0.455560 | 4_1:+40254525 | Msa0547330:CDS |
| AAGGAAGAAGGCAAGGAGAA+AGG | 0.456765 | 4_1:+40253008 | Msa0547330:CDS |
| TTTGCTTGAAATGGACATAA+GGG | 0.458437 | 4_1:+40254277 | Msa0547330:CDS |
| AGTTTCCTCCTTTGGCTCCA+TGG | 0.465006 | 4_1:-40253944 | None:intergenic |
| ATTGCTCAAGGCCAAGGAAA+TGG | 0.467146 | 4_1:+40252945 | Msa0547330:CDS |
| GGTAACGGTAACAATGGAAA+TGG | 0.468560 | 4_1:+40252972 | Msa0547330:CDS |
| CTACCGATGATGACGCTGAA+TGG | 0.469881 | 4_1:+40254177 | Msa0547330:CDS |
| GAAAGGAAAAGGAAAAGAGA+AGG | 0.473332 | 4_1:+40253025 | Msa0547330:CDS |
| CAGTTGCAAACTTTGCCATC+AGG | 0.477219 | 4_1:+40253101 | Msa0547330:CDS |
| GCAAACTTTGCCATCAGGAC+AGG | 0.479019 | 4_1:+40253106 | Msa0547330:CDS |
| TACGATCCTCGCTTTGTTGG+TGG | 0.482458 | 4_1:+40253900 | Msa0547330:CDS |
| TGACTCTCTTACAGTAAAAT+GGG | 0.484783 | 4_1:+40254133 | Msa0547330:CDS |
| AATATTGAGCAATGACTCCT+TGG | 0.485386 | 4_1:-40254568 | None:intergenic |
| CATGTTGTTGAAAAGAGAGA+TGG | 0.491460 | 4_1:-40254512 | None:intergenic |
| AGAGCAAACTGTGATGGTTA+CGG | 0.511380 | 4_1:+40253867 | Msa0547330:CDS |
| CCAAGATGGCAGGAGGAAAG+TGG | 0.514698 | 4_1:+40252874 | None:intergenic |
| AGAGAGTTCACCAAGATGGC+AGG | 0.515343 | 4_1:+40252864 | None:intergenic |
| GACGCTGAATGGAAGACTAA+TGG | 0.526534 | 4_1:+40254188 | Msa0547330:CDS |
| AAATGGTAAGGGAAATGATA+AGG | 0.526665 | 4_1:+40252989 | Msa0547330:CDS |
| TTGACAGGACTAACATAACT+TGG | 0.528654 | 4_1:-40254440 | None:intergenic |
| TTCTACTTCCATGGAGCCAA+AGG | 0.530261 | 4_1:+40253936 | Msa0547330:CDS |
| AGGAGGAAAGTGGAGCATCT+TGG | 0.533383 | 4_1:+40252884 | Msa0547330:CDS |
| ATAGCAATTCCTCTCTTGAC+AGG | 0.533897 | 4_1:-40254455 | None:intergenic |
| CAGCCAATAGAGTAACTCAA+TGG | 0.535035 | 4_1:+40254099 | Msa0547330:CDS |
| GAAGGACTCGCGACTACACA+TGG | 0.541845 | 4_1:+40254030 | Msa0547330:CDS |
| GCTGCCATTGCTCAAGGCCA+AGG | 0.542712 | 4_1:+40252939 | Msa0547330:CDS |
| CAAGGCCAAGGAAATGGTAA+TGG | 0.543693 | 4_1:+40252951 | Msa0547330:CDS |
| AAAGAAGAAGGCTCCAAAAG+AGG | 0.546050 | 4_1:+40253061 | Msa0547330:CDS |
| AAGGGAAATGATAAGGAAGA+AGG | 0.548679 | 4_1:+40252996 | Msa0547330:CDS |
| AAATGATAAGGAAGAAGGCA+AGG | 0.550988 | 4_1:+40253001 | Msa0547330:CDS |
| AGCGTCATCATCGGTAGGAA+TGG | 0.553954 | 4_1:-40254171 | None:intergenic |
| AATGCTCGCTCCTGTCCTGA+TGG | 0.556099 | 4_1:-40253116 | None:intergenic |
| GATGAACTTACACTTGCAAG+TGG | 0.557056 | 4_1:-40253264 | None:intergenic |
| ATGGAAGCTGCCATTGCTCA+AGG | 0.563232 | 4_1:+40252933 | Msa0547330:CDS |
| AGCAATGACTCCTTGGCTAG+TGG | 0.564443 | 4_1:-40254561 | None:intergenic |
| ATTTCCTTGGCCTTGAGCAA+TGG | 0.568400 | 4_1:-40252943 | None:intergenic |
| GGTGTGATGTTCTACTTCCA+TGG | 0.570969 | 4_1:+40253927 | Msa0547330:CDS |
| GGTAATGGTAACGGTAACAA+TGG | 0.571925 | 4_1:+40252966 | Msa0547330:CDS |
| TTGGTACTCGGCCTCAGGGA+AGG | 0.575908 | 4_1:+40254012 | Msa0547330:CDS |
| CTTCCATTCAGCGTCATCAT+CGG | 0.576076 | 4_1:-40254180 | None:intergenic |
| GCAAACTCTGCAGGTTCCAG+AGG | 0.576301 | 4_1:+40254534 | Msa0547330:CDS |
| GGTAACAATGGAAATGGTAA+GGG | 0.582315 | 4_1:+40252978 | Msa0547330:CDS |
| TGATGAAAGAGTAGTAGTTG+TGG | 0.583327 | 4_1:+40254211 | Msa0547330:CDS |
| GGAATTGCTATGCCAATGAT+GGG | 0.584815 | 4_1:+40254467 | Msa0547330:CDS |
| GTCCAGCTGAGTGCAAAACC+AGG | 0.585455 | 4_1:+40253180 | Msa0547330:CDS |
| GTTAGAAGAGCAAACTGTGA+TGG | 0.591528 | 4_1:+40253861 | Msa0547330:intron |
| ACTCCTTCAATAGAATCTGT+AGG | 0.597663 | 4_1:-40254398 | None:intergenic |
| ACGCACACTTCATTGGTACT+CGG | 0.600159 | 4_1:+40254000 | Msa0547330:CDS |
| CAAGGAAATGGTAATGGTAA+CGG | 0.600503 | 4_1:+40252957 | Msa0547330:CDS |
| CAGAGGCCTTCCACTAGCCA+AGG | 0.603668 | 4_1:+40254551 | Msa0547330:CDS |
| TGAGCAAAAGCATCATCTGA+TGG | 0.608641 | 4_1:-40254347 | None:intergenic |
| TTCATTGGTACTCGGCCTCA+GGG | 0.609556 | 4_1:+40254008 | Msa0547330:CDS |
| ATGACTCCTTGGCTAGTGGA+AGG | 0.614412 | 4_1:-40254557 | None:intergenic |
| TACTTCCATGGAGCCAAAGG+AGG | 0.618849 | 4_1:+40253939 | Msa0547330:CDS |
| AGGAAAGTGGAGCATCTTGG+TGG | 0.627956 | 4_1:+40252887 | Msa0547330:CDS |
| TATTGGAGAAAAGGAAAACA+AGG | 0.629127 | 4_1:+40254307 | Msa0547330:CDS |
| CATTCAGCGTCATCATCGGT+AGG | 0.633170 | 4_1:-40254176 | None:intergenic |
| TATGTTAGTCCTGTCAAGAG+AGG | 0.634498 | 4_1:+40254446 | Msa0547330:CDS |
| GAGTTCACCAAGATGGCAGG+AGG | 0.649508 | 4_1:+40252867 | None:intergenic |
| TCTCTTACAGTAAAATGGGA+CGG | 0.652194 | 4_1:+40254137 | Msa0547330:CDS |
| CCGTCTCCACCAACAAAGCG+AGG | 0.670633 | 4_1:-40253906 | None:intergenic |
| AGAGAGAAGTAAGATAAACA+AGG | 0.672417 | 4_1:-40252910 | None:intergenic |
| ATTGCTATGCCAATGATGGG+AGG | 0.672930 | 4_1:+40254470 | Msa0547330:CDS |
| AAGGACTCGCGACTACACAT+GGG | 0.715742 | 4_1:+40254031 | Msa0547330:CDS |
| TAGTCGCGAGTCCTTCCCTG+AGG | 0.736450 | 4_1:-40254023 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGGTATAATATTCAATT+TGG | + | chr4_1:40253304-40253323 | Msa0547330:intron | 15.0% |
| !!! | TTTTGGTATAATATTCAATT+TGG | + | chr4_1:40253304-40253323 | Msa0547330:intron | 15.0% |
| !!! | TTTATACTCTTCTATACTTT+TGG | + | chr4_1:40253287-40253306 | Msa0547330:intron | 20.0% |
| !! | TTGCATTCAAAATATAATGT+TGG | - | chr4_1:40253400-40253419 | None:intergenic | 20.0% |
| !! | TAATTTAATTAGAGAATGAG+AGG | + | chr4_1:40253586-40253605 | Msa0547330:intron | 20.0% |
| !! | TGCCTAAATTAATTACATTT+GGG | - | chr4_1:40253627-40253646 | None:intergenic | 20.0% |
| !!! | TTTATACTCTTCTATACTTT+TGG | + | chr4_1:40253287-40253306 | Msa0547330:intron | 20.0% |
| !! | TTGCATTCAAAATATAATGT+TGG | - | chr4_1:40253400-40253419 | None:intergenic | 20.0% |
| !! | TAATTTAATTAGAGAATGAG+AGG | + | chr4_1:40253586-40253605 | Msa0547330:intron | 20.0% |
| !! | TGCCTAAATTAATTACATTT+GGG | - | chr4_1:40253627-40253646 | None:intergenic | 20.0% |
| !!! | TAATTTGATGATTCCTCTTT+TGG | - | chr4_1:40253077-40253096 | None:intergenic | 25.0% |
| ! | TTATCTTTCTTGTTCTTCTT+TGG | - | chr4_1:40253209-40253228 | None:intergenic | 25.0% |
| ! | AAGAAGAACAAGAAAGATAA+AGG | + | chr4_1:40253209-40253228 | Msa0547330:CDS | 25.0% |
| ! | ATGAACTATTTGACTAAGTT+CGG | + | chr4_1:40253362-40253381 | Msa0547330:intron | 25.0% |
| ! | TTCCTTACTATAGTAAATTC+AGG | + | chr4_1:40253484-40253503 | Msa0547330:intron | 25.0% |
| !! | AAGAACAAAGAAGCATAAAA+TGG | - | chr4_1:40253552-40253571 | None:intergenic | 25.0% |
| ! | ACCCCAAATGTAATTAATTT+AGG | + | chr4_1:40253622-40253641 | Msa0547330:intron | 25.0% |
| ! | GCCTAAATTAATTACATTTG+GGG | - | chr4_1:40253626-40253645 | None:intergenic | 25.0% |
| ! | GTGCCTAAATTAATTACATT+TGG | - | chr4_1:40253628-40253647 | None:intergenic | 25.0% |
| !!! | TTGTACCTTTTTTAAGTTGT+GGG | - | chr4_1:40253654-40253673 | None:intergenic | 25.0% |
| !!! | ATTGTACCTTTTTTAAGTTG+TGG | - | chr4_1:40253655-40253674 | None:intergenic | 25.0% |
| ! | TTATTACCATCAATCATTCT+CGG | - | chr4_1:40253781-40253800 | None:intergenic | 25.0% |
| !!! | TAATTTGATGATTCCTCTTT+TGG | - | chr4_1:40253077-40253096 | None:intergenic | 25.0% |
| ! | TTATCTTTCTTGTTCTTCTT+TGG | - | chr4_1:40253209-40253228 | None:intergenic | 25.0% |
| ! | AAGAAGAACAAGAAAGATAA+AGG | + | chr4_1:40253209-40253228 | Msa0547330:CDS | 25.0% |
| ! | ATGAACTATTTGACTAAGTT+CGG | + | chr4_1:40253362-40253381 | Msa0547330:intron | 25.0% |
| ! | TTCCTTACTATAGTAAATTC+AGG | + | chr4_1:40253484-40253503 | Msa0547330:intron | 25.0% |
| !! | AAGAACAAAGAAGCATAAAA+TGG | - | chr4_1:40253552-40253571 | None:intergenic | 25.0% |
| ! | ACCCCAAATGTAATTAATTT+AGG | + | chr4_1:40253622-40253641 | Msa0547330:intron | 25.0% |
| ! | GCCTAAATTAATTACATTTG+GGG | - | chr4_1:40253626-40253645 | None:intergenic | 25.0% |
| ! | GTGCCTAAATTAATTACATT+TGG | - | chr4_1:40253628-40253647 | None:intergenic | 25.0% |
| !!! | TTGTACCTTTTTTAAGTTGT+GGG | - | chr4_1:40253654-40253673 | None:intergenic | 25.0% |
| !!! | ATTGTACCTTTTTTAAGTTG+TGG | - | chr4_1:40253655-40253674 | None:intergenic | 25.0% |
| ! | TTATTACCATCAATCATTCT+CGG | - | chr4_1:40253781-40253800 | None:intergenic | 25.0% |
| AGAGAGAAGTAAGATAAACA+AGG | - | chr4_1:40252913-40252932 | None:intergenic | 30.0% | |
| GTTTATCTTACTTCTCTCTA+TGG | + | chr4_1:40252914-40252933 | Msa0547330:CDS | 30.0% | |
| AAATGGTAAGGGAAATGATA+AGG | + | chr4_1:40252989-40253008 | Msa0547330:CDS | 30.0% | |
| CACCTGAATTTACTATAGTA+AGG | - | chr4_1:40253489-40253508 | None:intergenic | 30.0% | |
| GATTGTTATGTGTGCTTAAA+TGG | + | chr4_1:40253720-40253739 | Msa0547330:intron | 30.0% | |
| ATTCCATTGAGTTACTCTAT+TGG | - | chr4_1:40254105-40254124 | None:intergenic | 30.0% | |
| TTGACTCTCTTACAGTAAAA+TGG | + | chr4_1:40254132-40254151 | Msa0547330:CDS | 30.0% | |
| TGACTCTCTTACAGTAAAAT+GGG | + | chr4_1:40254133-40254152 | Msa0547330:CDS | 30.0% | |
| TTTGCTTGAAATGGACATAA+GGG | + | chr4_1:40254277-40254296 | Msa0547330:CDS | 30.0% | |
| ! | TTGTTTTCCTTTTCTCCAAT+AGG | - | chr4_1:40254308-40254327 | None:intergenic | 30.0% |
| TATTGGAGAAAAGGAAAACA+AGG | + | chr4_1:40254307-40254326 | Msa0547330:CDS | 30.0% | |
| AATCCTACAGATTCTATTGA+AGG | + | chr4_1:40254395-40254414 | Msa0547330:CDS | 30.0% | |
| ! | GATTCTATTGAAGGAGTTTT+AGG | + | chr4_1:40254404-40254423 | Msa0547330:CDS | 30.0% |
| !!! | GAGTTTTAGGTCAAACTTAT+AGG | + | chr4_1:40254417-40254436 | Msa0547330:CDS | 30.0% |
| AGAGAGAAGTAAGATAAACA+AGG | - | chr4_1:40252913-40252932 | None:intergenic | 30.0% | |
| GTTTATCTTACTTCTCTCTA+TGG | + | chr4_1:40252914-40252933 | Msa0547330:CDS | 30.0% | |
| AAATGGTAAGGGAAATGATA+AGG | + | chr4_1:40252989-40253008 | Msa0547330:CDS | 30.0% | |
| CACCTGAATTTACTATAGTA+AGG | - | chr4_1:40253489-40253508 | None:intergenic | 30.0% | |
| GATTGTTATGTGTGCTTAAA+TGG | + | chr4_1:40253720-40253739 | Msa0547330:intron | 30.0% | |
| ATTCCATTGAGTTACTCTAT+TGG | - | chr4_1:40254105-40254124 | None:intergenic | 30.0% | |
| TTGACTCTCTTACAGTAAAA+TGG | + | chr4_1:40254132-40254151 | Msa0547330:CDS | 30.0% | |
| TGACTCTCTTACAGTAAAAT+GGG | + | chr4_1:40254133-40254152 | Msa0547330:CDS | 30.0% | |
| TTTGCTTGAAATGGACATAA+GGG | + | chr4_1:40254277-40254296 | Msa0547330:CDS | 30.0% | |
| ! | TTGTTTTCCTTTTCTCCAAT+AGG | - | chr4_1:40254308-40254327 | None:intergenic | 30.0% |
| TATTGGAGAAAAGGAAAACA+AGG | + | chr4_1:40254307-40254326 | Msa0547330:CDS | 30.0% | |
| AATCCTACAGATTCTATTGA+AGG | + | chr4_1:40254395-40254414 | Msa0547330:CDS | 30.0% | |
| ! | GATTCTATTGAAGGAGTTTT+AGG | + | chr4_1:40254404-40254423 | Msa0547330:CDS | 30.0% |
| !!! | GAGTTTTAGGTCAAACTTAT+AGG | + | chr4_1:40254417-40254436 | Msa0547330:CDS | 30.0% |
| !! | CAAGGAAATGGTAATGGTAA+CGG | + | chr4_1:40252957-40252976 | Msa0547330:CDS | 35.0% |
| GGTAACAATGGAAATGGTAA+GGG | + | chr4_1:40252978-40252997 | Msa0547330:CDS | 35.0% | |
| AAGGGAAATGATAAGGAAGA+AGG | + | chr4_1:40252996-40253015 | Msa0547330:CDS | 35.0% | |
| AAATGATAAGGAAGAAGGCA+AGG | + | chr4_1:40253001-40253020 | Msa0547330:CDS | 35.0% | |
| GAAAGGAAAAGGAAAAGAGA+AGG | + | chr4_1:40253025-40253044 | Msa0547330:CDS | 35.0% | |
| GAAAGCTCCAAAAAAGAAGA+AGG | + | chr4_1:40253049-40253068 | Msa0547330:CDS | 35.0% | |
| !!! | TTTGGAGCCTTCTTCTTTTT+TGG | - | chr4_1:40253059-40253078 | None:intergenic | 35.0% |
| ACACTCCCACAACTTAAAAA+AGG | + | chr4_1:40253646-40253665 | Msa0547330:intron | 35.0% | |
| TTCTCGGAGAAATACTTCTA+TGG | - | chr4_1:40253765-40253784 | None:intergenic | 35.0% | |
| ATTTCTCCGAGAATGATTGA+TGG | + | chr4_1:40253772-40253791 | Msa0547330:intron | 35.0% | |
| TCTCTTACAGTAAAATGGGA+CGG | + | chr4_1:40254137-40254156 | Msa0547330:CDS | 35.0% | |
| TGATGAAAGAGTAGTAGTTG+TGG | + | chr4_1:40254211-40254230 | Msa0547330:CDS | 35.0% | |
| !! | AGTTTCTGGTTTGCTTGAAA+TGG | + | chr4_1:40254268-40254287 | Msa0547330:CDS | 35.0% |
| GTTTGCTTGAAATGGACATA+AGG | + | chr4_1:40254276-40254295 | Msa0547330:CDS | 35.0% | |
| ! | AGATGATGCTTTTGCTCATT+TGG | + | chr4_1:40254352-40254371 | Msa0547330:CDS | 35.0% |
| ACTCCTTCAATAGAATCTGT+AGG | - | chr4_1:40254401-40254420 | None:intergenic | 35.0% | |
| TTGACAGGACTAACATAACT+TGG | - | chr4_1:40254443-40254462 | None:intergenic | 35.0% | |
| TTGAAAAGAGAGATGGAGTT+TGG | - | chr4_1:40254508-40254527 | None:intergenic | 35.0% | |
| CATGTTGTTGAAAAGAGAGA+TGG | - | chr4_1:40254515-40254534 | None:intergenic | 35.0% | |
| AATATTGAGCAATGACTCCT+TGG | - | chr4_1:40254571-40254590 | None:intergenic | 35.0% | |
| !! | CAAGGAAATGGTAATGGTAA+CGG | + | chr4_1:40252957-40252976 | Msa0547330:CDS | 35.0% |
| GGTAACAATGGAAATGGTAA+GGG | + | chr4_1:40252978-40252997 | Msa0547330:CDS | 35.0% | |
| AAGGGAAATGATAAGGAAGA+AGG | + | chr4_1:40252996-40253015 | Msa0547330:CDS | 35.0% | |
| AAATGATAAGGAAGAAGGCA+AGG | + | chr4_1:40253001-40253020 | Msa0547330:CDS | 35.0% | |
| GAAAGGAAAAGGAAAAGAGA+AGG | + | chr4_1:40253025-40253044 | Msa0547330:CDS | 35.0% | |
| GAAAGCTCCAAAAAAGAAGA+AGG | + | chr4_1:40253049-40253068 | Msa0547330:CDS | 35.0% | |
| !!! | TTTGGAGCCTTCTTCTTTTT+TGG | - | chr4_1:40253059-40253078 | None:intergenic | 35.0% |
| ACACTCCCACAACTTAAAAA+AGG | + | chr4_1:40253646-40253665 | Msa0547330:intron | 35.0% | |
| TTCTCGGAGAAATACTTCTA+TGG | - | chr4_1:40253765-40253784 | None:intergenic | 35.0% | |
| ATTTCTCCGAGAATGATTGA+TGG | + | chr4_1:40253772-40253791 | Msa0547330:intron | 35.0% | |
| TCTCTTACAGTAAAATGGGA+CGG | + | chr4_1:40254137-40254156 | Msa0547330:CDS | 35.0% | |
| TGATGAAAGAGTAGTAGTTG+TGG | + | chr4_1:40254211-40254230 | Msa0547330:CDS | 35.0% | |
| !! | AGTTTCTGGTTTGCTTGAAA+TGG | + | chr4_1:40254268-40254287 | Msa0547330:CDS | 35.0% |
| GTTTGCTTGAAATGGACATA+AGG | + | chr4_1:40254276-40254295 | Msa0547330:CDS | 35.0% | |
| ! | AGATGATGCTTTTGCTCATT+TGG | + | chr4_1:40254352-40254371 | Msa0547330:CDS | 35.0% |
| ACTCCTTCAATAGAATCTGT+AGG | - | chr4_1:40254401-40254420 | None:intergenic | 35.0% | |
| TTGACAGGACTAACATAACT+TGG | - | chr4_1:40254443-40254462 | None:intergenic | 35.0% | |
| TTGAAAAGAGAGATGGAGTT+TGG | - | chr4_1:40254508-40254527 | None:intergenic | 35.0% | |
| CATGTTGTTGAAAAGAGAGA+TGG | - | chr4_1:40254515-40254534 | None:intergenic | 35.0% | |
| AATATTGAGCAATGACTCCT+TGG | - | chr4_1:40254571-40254590 | None:intergenic | 35.0% | |
| CGTTACCATTACCATTTCCT+TGG | - | chr4_1:40252959-40252978 | None:intergenic | 40.0% | |
| !! | GGTAATGGTAACGGTAACAA+TGG | + | chr4_1:40252966-40252985 | Msa0547330:CDS | 40.0% |
| ! | GGTAACGGTAACAATGGAAA+TGG | + | chr4_1:40252972-40252991 | Msa0547330:CDS | 40.0% |
| CGGTAACAATGGAAATGGTA+AGG | + | chr4_1:40252977-40252996 | Msa0547330:CDS | 40.0% | |
| AAAGAAGAAGGCTCCAAAAG+AGG | + | chr4_1:40253061-40253080 | Msa0547330:CDS | 40.0% | |
| GATGAACTTACACTTGCAAG+TGG | - | chr4_1:40253267-40253286 | None:intergenic | 40.0% | |
| CTCAACCGTCAGATTAAGAT+CGG | - | chr4_1:40253437-40253456 | None:intergenic | 40.0% | |
| CTTAATCTGACGGTTGAGAT+CGG | + | chr4_1:40253439-40253458 | Msa0547330:intron | 40.0% | |
| TTAATCTGACGGTTGAGATC+GGG | + | chr4_1:40253440-40253459 | Msa0547330:intron | 40.0% | |
| GTTAGAAGAGCAAACTGTGA+TGG | + | chr4_1:40253861-40253880 | Msa0547330:intron | 40.0% | |
| AGAGCAAACTGTGATGGTTA+CGG | + | chr4_1:40253867-40253886 | Msa0547330:CDS | 40.0% | |
| TATGGCAAAGTTTCCTCCTT+TGG | - | chr4_1:40253955-40253974 | None:intergenic | 40.0% | |
| ! | GAATTCGTCGTCTGAAACTA+TGG | - | chr4_1:40253973-40253992 | None:intergenic | 40.0% |
| !! | CAATGAAGTGTGCGTTGATT+TGG | - | chr4_1:40253995-40254014 | None:intergenic | 40.0% |
| CAAATCAACGCACACTTCAT+TGG | + | chr4_1:40253993-40254012 | Msa0547330:CDS | 40.0% | |
| CAGCCAATAGAGTAACTCAA+TGG | + | chr4_1:40254099-40254118 | Msa0547330:CDS | 40.0% | |
| AGTGTTAGAGTCACAGTTTC+TGG | + | chr4_1:40254254-40254273 | Msa0547330:CDS | 40.0% | |
| GACATAAGGGTAAGACCTAT+TGG | + | chr4_1:40254290-40254309 | Msa0547330:CDS | 40.0% | |
| GGTAAGACCTATTGGAGAAA+AGG | + | chr4_1:40254298-40254317 | Msa0547330:CDS | 40.0% | |
| !! | TGAGCAAAAGCATCATCTGA+TGG | - | chr4_1:40254350-40254369 | None:intergenic | 40.0% |
| TATGTTAGTCCTGTCAAGAG+AGG | + | chr4_1:40254446-40254465 | Msa0547330:CDS | 40.0% | |
| ATAGCAATTCCTCTCTTGAC+AGG | - | chr4_1:40254458-40254477 | None:intergenic | 40.0% | |
| AGGAATTGCTATGCCAATGA+TGG | + | chr4_1:40254466-40254485 | Msa0547330:CDS | 40.0% | |
| GGAATTGCTATGCCAATGAT+GGG | + | chr4_1:40254467-40254486 | Msa0547330:CDS | 40.0% | |
| CGTTACCATTACCATTTCCT+TGG | - | chr4_1:40252959-40252978 | None:intergenic | 40.0% | |
| !! | GGTAATGGTAACGGTAACAA+TGG | + | chr4_1:40252966-40252985 | Msa0547330:CDS | 40.0% |
| ! | GGTAACGGTAACAATGGAAA+TGG | + | chr4_1:40252972-40252991 | Msa0547330:CDS | 40.0% |
| CGGTAACAATGGAAATGGTA+AGG | + | chr4_1:40252977-40252996 | Msa0547330:CDS | 40.0% | |
| AAAGAAGAAGGCTCCAAAAG+AGG | + | chr4_1:40253061-40253080 | Msa0547330:CDS | 40.0% | |
| GATGAACTTACACTTGCAAG+TGG | - | chr4_1:40253267-40253286 | None:intergenic | 40.0% | |
| CTCAACCGTCAGATTAAGAT+CGG | - | chr4_1:40253437-40253456 | None:intergenic | 40.0% | |
| CTTAATCTGACGGTTGAGAT+CGG | + | chr4_1:40253439-40253458 | Msa0547330:intron | 40.0% | |
| TTAATCTGACGGTTGAGATC+GGG | + | chr4_1:40253440-40253459 | Msa0547330:intron | 40.0% | |
| GTTAGAAGAGCAAACTGTGA+TGG | + | chr4_1:40253861-40253880 | Msa0547330:intron | 40.0% | |
| AGAGCAAACTGTGATGGTTA+CGG | + | chr4_1:40253867-40253886 | Msa0547330:CDS | 40.0% | |
| TATGGCAAAGTTTCCTCCTT+TGG | - | chr4_1:40253955-40253974 | None:intergenic | 40.0% | |
| ! | GAATTCGTCGTCTGAAACTA+TGG | - | chr4_1:40253973-40253992 | None:intergenic | 40.0% |
| !! | CAATGAAGTGTGCGTTGATT+TGG | - | chr4_1:40253995-40254014 | None:intergenic | 40.0% |
| CAAATCAACGCACACTTCAT+TGG | + | chr4_1:40253993-40254012 | Msa0547330:CDS | 40.0% | |
| CAGCCAATAGAGTAACTCAA+TGG | + | chr4_1:40254099-40254118 | Msa0547330:CDS | 40.0% | |
| AGTGTTAGAGTCACAGTTTC+TGG | + | chr4_1:40254254-40254273 | Msa0547330:CDS | 40.0% | |
| GACATAAGGGTAAGACCTAT+TGG | + | chr4_1:40254290-40254309 | Msa0547330:CDS | 40.0% | |
| GGTAAGACCTATTGGAGAAA+AGG | + | chr4_1:40254298-40254317 | Msa0547330:CDS | 40.0% | |
| !! | TGAGCAAAAGCATCATCTGA+TGG | - | chr4_1:40254350-40254369 | None:intergenic | 40.0% |
| TATGTTAGTCCTGTCAAGAG+AGG | + | chr4_1:40254446-40254465 | Msa0547330:CDS | 40.0% | |
| ATAGCAATTCCTCTCTTGAC+AGG | - | chr4_1:40254458-40254477 | None:intergenic | 40.0% | |
| AGGAATTGCTATGCCAATGA+TGG | + | chr4_1:40254466-40254485 | Msa0547330:CDS | 40.0% | |
| GGAATTGCTATGCCAATGAT+GGG | + | chr4_1:40254467-40254486 | Msa0547330:CDS | 40.0% | |
| !! | ATTTCCTTGGCCTTGAGCAA+TGG | - | chr4_1:40252946-40252965 | None:intergenic | 45.0% |
| ATTGCTCAAGGCCAAGGAAA+TGG | + | chr4_1:40252945-40252964 | Msa0547330:CDS | 45.0% | |
| CAAGGCCAAGGAAATGGTAA+TGG | + | chr4_1:40252951-40252970 | Msa0547330:CDS | 45.0% | |
| AAGGAAGAAGGCAAGGAGAA+AGG | + | chr4_1:40253008-40253027 | Msa0547330:CDS | 45.0% | |
| GAAGGCAAGGAGAAAGGAAA+AGG | + | chr4_1:40253014-40253033 | Msa0547330:CDS | 45.0% | |
| CAGTTGCAAACTTTGCCATC+AGG | + | chr4_1:40253101-40253120 | Msa0547330:CDS | 45.0% | |
| ! | CTTGTTCTTCTTTGGCTTCC+TGG | - | chr4_1:40253201-40253220 | None:intergenic | 45.0% |
| GTCGTCCGATCTTAATCTGA+CGG | + | chr4_1:40253429-40253448 | Msa0547330:intron | 45.0% | |
| GGTGTGATGTTCTACTTCCA+TGG | + | chr4_1:40253927-40253946 | Msa0547330:CDS | 45.0% | |
| TTCTACTTCCATGGAGCCAA+AGG | + | chr4_1:40253936-40253955 | Msa0547330:CDS | 45.0% | |
| ACGCACACTTCATTGGTACT+CGG | + | chr4_1:40254000-40254019 | Msa0547330:CDS | 45.0% | |
| CTTCCATTCAGCGTCATCAT+CGG | - | chr4_1:40254183-40254202 | None:intergenic | 45.0% | |
| GACGCTGAATGGAAGACTAA+TGG | + | chr4_1:40254188-40254207 | Msa0547330:CDS | 45.0% | |
| ! | ATTGCTATGCCAATGATGGG+AGG | + | chr4_1:40254470-40254489 | Msa0547330:CDS | 45.0% |
| TTGTCTTCTCCTCCCATCAT+TGG | - | chr4_1:40254482-40254501 | None:intergenic | 45.0% | |
| CAACAACATGCAAACTCTGC+AGG | + | chr4_1:40254525-40254544 | Msa0547330:CDS | 45.0% | |
| !! | ATTTCCTTGGCCTTGAGCAA+TGG | - | chr4_1:40252946-40252965 | None:intergenic | 45.0% |
| ATTGCTCAAGGCCAAGGAAA+TGG | + | chr4_1:40252945-40252964 | Msa0547330:CDS | 45.0% | |
| CAAGGCCAAGGAAATGGTAA+TGG | + | chr4_1:40252951-40252970 | Msa0547330:CDS | 45.0% | |
| AAGGAAGAAGGCAAGGAGAA+AGG | + | chr4_1:40253008-40253027 | Msa0547330:CDS | 45.0% | |
| GAAGGCAAGGAGAAAGGAAA+AGG | + | chr4_1:40253014-40253033 | Msa0547330:CDS | 45.0% | |
| CAGTTGCAAACTTTGCCATC+AGG | + | chr4_1:40253101-40253120 | Msa0547330:CDS | 45.0% | |
| ! | CTTGTTCTTCTTTGGCTTCC+TGG | - | chr4_1:40253201-40253220 | None:intergenic | 45.0% |
| GTCGTCCGATCTTAATCTGA+CGG | + | chr4_1:40253429-40253448 | Msa0547330:intron | 45.0% | |
| GGTGTGATGTTCTACTTCCA+TGG | + | chr4_1:40253927-40253946 | Msa0547330:CDS | 45.0% | |
| TTCTACTTCCATGGAGCCAA+AGG | + | chr4_1:40253936-40253955 | Msa0547330:CDS | 45.0% | |
| ACGCACACTTCATTGGTACT+CGG | + | chr4_1:40254000-40254019 | Msa0547330:CDS | 45.0% | |
| CTTCCATTCAGCGTCATCAT+CGG | - | chr4_1:40254183-40254202 | None:intergenic | 45.0% | |
| GACGCTGAATGGAAGACTAA+TGG | + | chr4_1:40254188-40254207 | Msa0547330:CDS | 45.0% | |
| ! | ATTGCTATGCCAATGATGGG+AGG | + | chr4_1:40254470-40254489 | Msa0547330:CDS | 45.0% |
| TTGTCTTCTCCTCCCATCAT+TGG | - | chr4_1:40254482-40254501 | None:intergenic | 45.0% | |
| CAACAACATGCAAACTCTGC+AGG | + | chr4_1:40254525-40254544 | Msa0547330:CDS | 45.0% | |
| ! | AGGAGGAAAGTGGAGCATCT+TGG | + | chr4_1:40252884-40252903 | Msa0547330:CDS | 50.0% |
| ! | AGGAAAGTGGAGCATCTTGG+TGG | + | chr4_1:40252887-40252906 | Msa0547330:CDS | 50.0% |
| ATGGAAGCTGCCATTGCTCA+AGG | + | chr4_1:40252933-40252952 | Msa0547330:CDS | 50.0% | |
| GCAAACTTTGCCATCAGGAC+AGG | + | chr4_1:40253106-40253125 | Msa0547330:CDS | 50.0% | |
| !!! | TTCCTGGTTTTGCACTCAGC+TGG | - | chr4_1:40253185-40253204 | None:intergenic | 50.0% |
| ACTGCGTGATTGCATGAACG+CGG | - | chr4_1:40253335-40253354 | None:intergenic | 50.0% | |
| GATCGGGTGACTGCATCAAA+AGG | + | chr4_1:40253456-40253475 | Msa0547330:intron | 50.0% | |
| TGCTACGATCCTCGCTTTGT+TGG | + | chr4_1:40253897-40253916 | Msa0547330:CDS | 50.0% | |
| ! | TACGATCCTCGCTTTGTTGG+TGG | + | chr4_1:40253900-40253919 | Msa0547330:CDS | 50.0% |
| TACTTCCATGGAGCCAAAGG+AGG | + | chr4_1:40253939-40253958 | Msa0547330:CDS | 50.0% | |
| ! | AGTTTCCTCCTTTGGCTCCA+TGG | - | chr4_1:40253947-40253966 | None:intergenic | 50.0% |
| TTCATTGGTACTCGGCCTCA+GGG | + | chr4_1:40254008-40254027 | Msa0547330:CDS | 50.0% | |
| AAGGACTCGCGACTACACAT+GGG | + | chr4_1:40254031-40254050 | Msa0547330:CDS | 50.0% | |
| AGCGTCATCATCGGTAGGAA+TGG | - | chr4_1:40254174-40254193 | None:intergenic | 50.0% | |
| CATTCAGCGTCATCATCGGT+AGG | - | chr4_1:40254179-40254198 | None:intergenic | 50.0% | |
| ! | CTACCGATGATGACGCTGAA+TGG | + | chr4_1:40254177-40254196 | Msa0547330:CDS | 50.0% |
| ATGACTCCTTGGCTAGTGGA+AGG | - | chr4_1:40254560-40254579 | None:intergenic | 50.0% | |
| AGCAATGACTCCTTGGCTAG+TGG | - | chr4_1:40254564-40254583 | None:intergenic | 50.0% | |
| ! | AGGAGGAAAGTGGAGCATCT+TGG | + | chr4_1:40252884-40252903 | Msa0547330:CDS | 50.0% |
| ! | AGGAAAGTGGAGCATCTTGG+TGG | + | chr4_1:40252887-40252906 | Msa0547330:CDS | 50.0% |
| ATGGAAGCTGCCATTGCTCA+AGG | + | chr4_1:40252933-40252952 | Msa0547330:CDS | 50.0% | |
| GCAAACTTTGCCATCAGGAC+AGG | + | chr4_1:40253106-40253125 | Msa0547330:CDS | 50.0% | |
| !!! | TTCCTGGTTTTGCACTCAGC+TGG | - | chr4_1:40253185-40253204 | None:intergenic | 50.0% |
| ACTGCGTGATTGCATGAACG+CGG | - | chr4_1:40253335-40253354 | None:intergenic | 50.0% | |
| GATCGGGTGACTGCATCAAA+AGG | + | chr4_1:40253456-40253475 | Msa0547330:intron | 50.0% | |
| TGCTACGATCCTCGCTTTGT+TGG | + | chr4_1:40253897-40253916 | Msa0547330:CDS | 50.0% | |
| ! | TACGATCCTCGCTTTGTTGG+TGG | + | chr4_1:40253900-40253919 | Msa0547330:CDS | 50.0% |
| TACTTCCATGGAGCCAAAGG+AGG | + | chr4_1:40253939-40253958 | Msa0547330:CDS | 50.0% | |
| ! | AGTTTCCTCCTTTGGCTCCA+TGG | - | chr4_1:40253947-40253966 | None:intergenic | 50.0% |
| TTCATTGGTACTCGGCCTCA+GGG | + | chr4_1:40254008-40254027 | Msa0547330:CDS | 50.0% | |
| AAGGACTCGCGACTACACAT+GGG | + | chr4_1:40254031-40254050 | Msa0547330:CDS | 50.0% | |
| AGCGTCATCATCGGTAGGAA+TGG | - | chr4_1:40254174-40254193 | None:intergenic | 50.0% | |
| CATTCAGCGTCATCATCGGT+AGG | - | chr4_1:40254179-40254198 | None:intergenic | 50.0% | |
| ! | CTACCGATGATGACGCTGAA+TGG | + | chr4_1:40254177-40254196 | Msa0547330:CDS | 50.0% |
| ATGACTCCTTGGCTAGTGGA+AGG | - | chr4_1:40254560-40254579 | None:intergenic | 50.0% | |
| AGCAATGACTCCTTGGCTAG+TGG | - | chr4_1:40254564-40254583 | None:intergenic | 50.0% | |
| AATGCTCGCTCCTGTCCTGA+TGG | - | chr4_1:40253119-40253138 | None:intergenic | 55.0% | |
| GTCCAGCTGAGTGCAAAACC+AGG | + | chr4_1:40253180-40253199 | Msa0547330:CDS | 55.0% | |
| ! | CCTCGCTTTGTTGGTGGAGA+CGG | + | chr4_1:40253906-40253925 | Msa0547330:CDS | 55.0% |
| CTTCATTGGTACTCGGCCTC+AGG | + | chr4_1:40254007-40254026 | Msa0547330:CDS | 55.0% | |
| GAAGGACTCGCGACTACACA+TGG | + | chr4_1:40254030-40254049 | Msa0547330:CDS | 55.0% | |
| GCAAACTCTGCAGGTTCCAG+AGG | + | chr4_1:40254534-40254553 | Msa0547330:CDS | 55.0% | |
| AATGCTCGCTCCTGTCCTGA+TGG | - | chr4_1:40253119-40253138 | None:intergenic | 55.0% | |
| GTCCAGCTGAGTGCAAAACC+AGG | + | chr4_1:40253180-40253199 | Msa0547330:CDS | 55.0% | |
| ! | CCTCGCTTTGTTGGTGGAGA+CGG | + | chr4_1:40253906-40253925 | Msa0547330:CDS | 55.0% |
| CTTCATTGGTACTCGGCCTC+AGG | + | chr4_1:40254007-40254026 | Msa0547330:CDS | 55.0% | |
| GAAGGACTCGCGACTACACA+TGG | + | chr4_1:40254030-40254049 | Msa0547330:CDS | 55.0% | |
| GCAAACTCTGCAGGTTCCAG+AGG | + | chr4_1:40254534-40254553 | Msa0547330:CDS | 55.0% | |
| GCTGCCATTGCTCAAGGCCA+AGG | + | chr4_1:40252939-40252958 | Msa0547330:CDS | 60.0% | |
| CCGTCTCCACCAACAAAGCG+AGG | - | chr4_1:40253909-40253928 | None:intergenic | 60.0% | |
| TTGGTACTCGGCCTCAGGGA+AGG | + | chr4_1:40254012-40254031 | Msa0547330:CDS | 60.0% | |
| TAGTCGCGAGTCCTTCCCTG+AGG | - | chr4_1:40254026-40254045 | None:intergenic | 60.0% | |
| CTTGGCTAGTGGAAGGCCTC+TGG | - | chr4_1:40254553-40254572 | None:intergenic | 60.0% | |
| CAGAGGCCTTCCACTAGCCA+AGG | + | chr4_1:40254551-40254570 | Msa0547330:CDS | 60.0% | |
| GCTGCCATTGCTCAAGGCCA+AGG | + | chr4_1:40252939-40252958 | Msa0547330:CDS | 60.0% | |
| CCGTCTCCACCAACAAAGCG+AGG | - | chr4_1:40253909-40253928 | None:intergenic | 60.0% | |
| TTGGTACTCGGCCTCAGGGA+AGG | + | chr4_1:40254012-40254031 | Msa0547330:CDS | 60.0% | |
| TAGTCGCGAGTCCTTCCCTG+AGG | - | chr4_1:40254026-40254045 | None:intergenic | 60.0% | |
| CTTGGCTAGTGGAAGGCCTC+TGG | - | chr4_1:40254553-40254572 | None:intergenic | 60.0% | |
| CAGAGGCCTTCCACTAGCCA+AGG | + | chr4_1:40254551-40254570 | Msa0547330:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 40252879 | 40254592 | 40252879 | ID=Msa0547330;Name=Msa0547330 |
| chr4_1 | mRNA | 40252879 | 40254592 | 40252879 | ID=Msa0547330-mRNA-1;Parent=Msa0547330;Name=Msa0547330-mRNA-1;_AED=0.03;_eAED=0.04;_QI=0|0|0|1|1|1|2|0|375 |
| chr4_1 | exon | 40252879 | 40253275 | 40252879 | ID=Msa0547330-mRNA-1:exon:10250;Parent=Msa0547330-mRNA-1 |
| chr4_1 | exon | 40253862 | 40254592 | 40253862 | ID=Msa0547330-mRNA-1:exon:10251;Parent=Msa0547330-mRNA-1 |
| chr4_1 | CDS | 40252879 | 40253275 | 40252879 | ID=Msa0547330-mRNA-1:cds;Parent=Msa0547330-mRNA-1 |
| chr4_1 | CDS | 40253862 | 40254592 | 40253862 | ID=Msa0547330-mRNA-1:cds;Parent=Msa0547330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
