AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1041910


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041910 MtrunA17_Chr7g0265231 95.027 563 24 3 1 562 1 560 0.0 967
Msa1041910 MtrunA17_Chr1g0179791 81.224 490 89 2 68 556 89 576 0.0 791
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1041910 AT5G03555.1 66.440 587 161 5 1 551 1 587 0.0 721

Find 113 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCTCAAATTCAGAATTT+TGG 0.140261 7_1:-79589873 Msa1041910:CDS
GACCAATAATTTGATCATTT+TGG 0.164424 7_1:+79589761 None:intergenic
ATTCAATTACTTGGTAAAAT+TGG 0.174264 7_1:-79589640 Msa1041910:CDS
GTCGAGTTTGAGAAAGAAAT+TGG 0.200651 7_1:-79589095 Msa1041910:CDS
TCAAAACCATGTGAAGAAAA+AGG 0.227962 7_1:+79590942 None:intergenic
AACCAACTAAGGCCCTTAAA+AGG 0.233275 7_1:+79590196 None:intergenic
GCGTTATGGCATATCATTTC+CGG 0.270782 7_1:-79590265 Msa1041910:CDS
GCTGGTAGCCTTGTTGATCT+TGG 0.274985 7_1:-79590789 Msa1041910:CDS
GACATTGAAGTTGAGACATT+TGG 0.280390 7_1:+79591136 None:intergenic
AGCCAAAATGATCAAATTAT+TGG 0.283409 7_1:-79589763 Msa1041910:CDS
ACTACAATCTTAGCCATTCT+TGG 0.289747 7_1:-79589607 Msa1041910:CDS
AGTTGGTTATTCTGCATTGA+TGG 0.294801 7_1:-79589398 Msa1041910:CDS
GTTCTTGCTAGATCATCTTT+TGG 0.301411 7_1:-79590243 Msa1041910:CDS
TAACTTCCTTACTCTTGATT+TGG 0.301911 7_1:-79589945 Msa1041910:CDS
GTCCCTTCTTATTACCTTGC+TGG 0.309994 7_1:-79590807 Msa1041910:CDS
TCTGCATTGATGGGTCCTAT+TGG 0.319696 7_1:-79589388 Msa1041910:CDS
GGTTGGAAATGGCTAGCCTT+TGG 0.321023 7_1:-79590848 Msa1041910:CDS
GCTATACTAACAGCATTTCT+TGG 0.321966 7_1:-79589481 Msa1041910:CDS
TATGTTAAAGCTGGTGGATT+TGG 0.325791 7_1:-79589919 Msa1041910:CDS
TTCTGAATTTGAGAGTTTAG+AGG 0.335043 7_1:+79589879 None:intergenic
CTGGTAGCCTTGTTGATCTT+GGG 0.344293 7_1:-79590788 Msa1041910:CDS
ATGGGTGCATTCACATTTGT+TGG 0.354383 7_1:-79589718 Msa1041910:CDS
GTTGGAAATGGCTAGCCTTT+GGG 0.357707 7_1:-79590847 Msa1041910:CDS
TTTGTATATACTTGGCTAGT+TGG 0.361674 7_1:-79589415 Msa1041910:CDS
CTGGATGACCAGTGAGGATC+AGG 0.366293 7_1:+79590706 None:intergenic
GGAATCTTACCTGTGATTCC+TGG 0.367449 7_1:-79589229 Msa1041910:CDS
GTAAGAGAGTTAGAGAGCTT+TGG 0.378000 7_1:+79591062 None:intergenic
TCCAACCCAATTCAATTACT+TGG 0.380360 7_1:-79589649 Msa1041910:CDS
TGAGGATCAGGGGAACAAAA+AGG 0.397284 7_1:+79590718 None:intergenic
TGGTTCAATTATCAATTGTA+TGG 0.399554 7_1:-79590026 Msa1041910:CDS
TTGTATTCAAGAAATCCTTA+TGG 0.412377 7_1:-79589307 Msa1041910:CDS
TTTGTTCCCCTGATCCTCAC+TGG 0.419591 7_1:-79590714 Msa1041910:CDS
GTCCTTTGGCTAGGTGTAGT+TGG 0.425237 7_1:+79590879 None:intergenic
AGATTTACAAGAGCATTTGC+AGG 0.428103 7_1:+79589535 None:intergenic
TTAGCATATCTTGTAAAATC+AGG 0.436745 7_1:+79589787 None:intergenic
CTGATCCTCACTGGTCATCC+AGG 0.436907 7_1:-79590705 Msa1041910:intron
TTAAGGGCCTTAGTTGGTTG+TGG 0.442410 7_1:-79590192 Msa1041910:CDS
CTTGGGATGGCTTGGTGGCA+AGG 0.444795 7_1:-79590771 Msa1041910:CDS
TTAGTTGGTTGTGGTTGGTA+TGG 0.445293 7_1:-79590183 Msa1041910:CDS
TTGATCTTGGGATGGCTTGG+TGG 0.445592 7_1:-79590776 Msa1041910:CDS
AAGAAAACTAATTTAAGCAT+TGG 0.446596 7_1:-79589334 Msa1041910:CDS
TTGTTGATCTTGGGATGGCT+TGG 0.450021 7_1:-79590779 Msa1041910:CDS
ACCAAGTAATTGAATTGGGT+TGG 0.450613 7_1:+79589648 None:intergenic
GTGAGAGCTTTGTATATACT+TGG 0.452917 7_1:-79589423 Msa1041910:CDS
ACTAGAATAATTCCTCCAAT+AGG 0.453650 7_1:+79589373 None:intergenic
CAATTACTTGGTAAAATTGG+TGG 0.458315 7_1:-79589637 Msa1041910:CDS
GTTACTGCAGGTACGCGTTA+TGG 0.459237 7_1:-79590279 Msa1041910:intron
TTGGAGTTGCATTTCAACCT+TGG 0.462788 7_1:-79589462 Msa1041910:CDS
AGTTGGCTTAAGATCATCAT+TGG 0.467576 7_1:+79590896 None:intergenic
GTTGGTTATTCTGCATTGAT+GGG 0.467875 7_1:-79589397 Msa1041910:CDS
CTTTGGGTAGGACTTGTTGT+GGG 0.470770 7_1:-79590831 Msa1041910:CDS
GAAGTTAGTAGAATGAGTAT+TGG 0.472811 7_1:+79589961 None:intergenic
TTATTGAATTTGGCAAAAGA+AGG 0.472834 7_1:+79590127 None:intergenic
AAAGATGATCTAGCAAGAAC+CGG 0.476184 7_1:+79590246 None:intergenic
ATACCAACCACAACCAACTA+AGG 0.481785 7_1:+79590185 None:intergenic
ATTGTATGGAAAGGAATTGA+AGG 0.487515 7_1:-79590012 Msa1041910:CDS
TGGTGCTTACTATTACACTA+AGG 0.487683 7_1:-79589287 Msa1041910:CDS
AGCTAGGCTTATACCAAGAA+TGG 0.487853 7_1:+79589594 None:intergenic
GGGCCTTAGTTGGTTGTGGT+TGG 0.491408 7_1:-79590188 Msa1041910:CDS
GATCAAATTATTGGTCAAGC+TGG 0.492344 7_1:-79589754 Msa1041910:CDS
ATTTGCAGGTGCTACAACAT+TGG 0.494946 7_1:+79589549 None:intergenic
GCATTGATGGGTCCTATTGG+AGG 0.498548 7_1:-79589385 Msa1041910:CDS
ATTTAATGTGGCAGCAATTG+TGG 0.499090 7_1:-79589263 Msa1041910:CDS
TGTTGGTTGTAATTGTAGCT+AGG 0.503124 7_1:+79589578 None:intergenic
ATTGATGTGAGAGAATTAGT+TGG 0.505356 7_1:+79591101 None:intergenic
ATATGACCAAATCAAGAGTA+AGG 0.505850 7_1:+79589939 None:intergenic
ATTTGGTCATATGTTAAAGC+TGG 0.507702 7_1:-79589928 Msa1041910:CDS
TGGTCATATGTTAAAGCTGG+TGG 0.510806 7_1:-79589925 Msa1041910:CDS
CTTGACTTAAGAAGCTTCCA+AGG 0.512122 7_1:+79589445 None:intergenic
CTTATATTAGCAGTTAGAGA+AGG 0.514112 7_1:+79589838 None:intergenic
TAGCCTTGTTGATCTTGGGA+TGG 0.514134 7_1:-79590784 Msa1041910:CDS
TCAAAATCTCTACCTTGGCT+TGG 0.514751 7_1:-79590090 Msa1041910:CDS
TCATTGGTAAGTGTGGGATC+AGG 0.516253 7_1:+79590912 None:intergenic
ACCAACTAAGGCCCTTAAAA+GGG 0.516958 7_1:+79590197 None:intergenic
GTGTAATAGTAAGCACCATA+AGG 0.524596 7_1:+79589292 None:intergenic
CTTCTAAAATTGAACCACAT+TGG 0.525736 7_1:+79589508 None:intergenic
AAACATTATTATGCAAGGCA+TGG 0.527048 7_1:+79590991 None:intergenic
CCTTTGGGTAGGACTTGTTG+TGG 0.527885 7_1:-79590832 Msa1041910:CDS
CAATTATCAATTGTATGGAA+AGG 0.537279 7_1:-79590021 Msa1041910:CDS
AAGATCATCATTGGTAAGTG+TGG 0.537536 7_1:+79590905 None:intergenic
TATTGGAGGAATTATTCTAG+TGG 0.543604 7_1:-79589371 Msa1041910:CDS
CATTGTCAAAATCTCTACCT+TGG 0.548679 7_1:-79590095 Msa1041910:CDS
GGTGCTTACTATTACACTAA+GGG 0.551755 7_1:-79589286 Msa1041910:CDS
GCAATTGTGGCTCTAGTCGT+TGG 0.552932 7_1:-79589250 Msa1041910:CDS
TTGTTGTCTATAATAATGCT+TGG 0.552958 7_1:-79589159 Msa1041910:CDS
TTATATTAGCAGTTAGAGAA+GGG 0.553068 7_1:+79589839 None:intergenic
TACAACATTGGCAGCAATGT+TGG 0.556572 7_1:+79589561 None:intergenic
CGATGAAACATTATTATGCA+AGG 0.563277 7_1:+79590986 None:intergenic
TTGTATGGAAAGGAATTGAA+GGG 0.565766 7_1:-79590011 Msa1041910:CDS
CTACCAGCAAGGTAATAAGA+AGG 0.566875 7_1:+79590804 None:intergenic
GGAATTGAAACATGGATTGG+TGG 0.572647 7_1:-79590162 Msa1041910:CDS
AACTAAGGCCCTTAAAAGGG+TGG 0.577930 7_1:+79590200 None:intergenic
AGATCATCATTGGTAAGTGT+GGG 0.578023 7_1:+79590906 None:intergenic
TATGGAATTGAAACATGGAT+TGG 0.583446 7_1:-79590165 Msa1041910:CDS
TGATAATTGAACCACCATGA+AGG 0.589905 7_1:+79590035 None:intergenic
TGGATGACCAGTGAGGATCA+GGG 0.593195 7_1:+79590707 None:intergenic
TTGGTGGCAAGGCATAGCTA+CGG 0.602844 7_1:-79590760 Msa1041910:CDS
GATCAACAAGGCTACCAGCA+AGG 0.609165 7_1:+79590793 None:intergenic
TTACACTAAGGGATTTAATG+TGG 0.614787 7_1:-79589275 Msa1041910:CDS
TACCAGCAAGGTAATAAGAA+GGG 0.615006 7_1:+79590805 None:intergenic
AGTGGGGAAGTGCCAAGCCA+AGG 0.621584 7_1:+79590078 None:intergenic
ACTAAGGCCCTTAAAAGGGT+GGG 0.621679 7_1:+79590201 None:intergenic
TTGTAAATCTTAGTCCAATG+TGG 0.629164 7_1:-79589522 Msa1041910:CDS
GTTGGTATGGAATTGAAACA+TGG 0.642108 7_1:-79590170 Msa1041910:CDS
GAAATGGCTAGCCTTTGGGT+AGG 0.643060 7_1:-79590843 Msa1041910:CDS
GTGGCAAGGCATAGCTACGG+TGG 0.646889 7_1:-79590757 Msa1041910:CDS
GGATGACCAGTGAGGATCAG+GGG 0.653817 7_1:+79590708 None:intergenic
AGCCAACTACACCTAGCCAA+AGG 0.664324 7_1:-79590881 Msa1041910:CDS
TTGCTTCATAGCCTTCATGG+TGG 0.664805 7_1:-79590046 Msa1041910:CDS
GGGTGGGAATGTGAGCACCA+TGG 0.672977 7_1:+79590217 None:intergenic
CCACAACAAGTCCTACCCAA+AGG 0.682442 7_1:+79590832 None:intergenic
AAGCCATCCCAAGATCAACA+AGG 0.710232 7_1:+79590781 None:intergenic
TTATACCTGGATGACCAGTG+AGG 0.765872 7_1:+79590700 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATGGTTTTCATTATATATT+TGG - chr7_1:79589829-79589848 Msa1041910:CDS 15.0%
!! TCATCAACAAAAATTATATT+TGG - chr7_1:79590509-79590528 Msa1041910:intron 15.0%
!!! TATGGTTTTCATTATATATT+TGG - chr7_1:79589829-79589848 Msa1041910:CDS 15.0%
!! TCATCAACAAAAATTATATT+TGG - chr7_1:79590509-79590528 Msa1041910:intron 15.0%
!!! TTGTTTAGTTTTTTTGATGA+TGG + chr7_1:79589162-79589181 None:intergenic 20.0%
!! TAATGAAAACCATATATGTT+TGG + chr7_1:79589823-79589842 None:intergenic 20.0%
!! TACTCATATATAATTTCAAG+TGG + chr7_1:79589859-79589878 None:intergenic 20.0%
!!! GTACTTTGTTTTATTGAATT+TGG + chr7_1:79590077-79590096 None:intergenic 20.0%
!!! TAACTGCTAATATAAGTTTT+TGG - chr7_1:79590360-79590379 Msa1041910:intron 20.0%
!!! AACTGCTAATATAAGTTTTT+GGG - chr7_1:79590361-79590380 Msa1041910:intron 20.0%
!!! TTTTACCAAGTAATTGAATT+GGG + chr7_1:79590550-79590569 None:intergenic 20.0%
!!! ATTTTACCAAGTAATTGAAT+TGG + chr7_1:79590551-79590570 None:intergenic 20.0%
!! ATTCAATTACTTGGTAAAAT+TGG - chr7_1:79590551-79590570 Msa1041910:intron 20.0%
!! AAGAAAACTAATTTAAGCAT+TGG - chr7_1:79590857-79590876 Msa1041910:CDS 20.0%
!!! TTGTTTAGTTTTTTTGATGA+TGG + chr7_1:79589162-79589181 None:intergenic 20.0%
!! TAATGAAAACCATATATGTT+TGG + chr7_1:79589823-79589842 None:intergenic 20.0%
!! TACTCATATATAATTTCAAG+TGG + chr7_1:79589859-79589878 None:intergenic 20.0%
!!! GTACTTTGTTTTATTGAATT+TGG + chr7_1:79590077-79590096 None:intergenic 20.0%
!!! TAACTGCTAATATAAGTTTT+TGG - chr7_1:79590360-79590379 Msa1041910:intron 20.0%
!!! AACTGCTAATATAAGTTTTT+GGG - chr7_1:79590361-79590380 Msa1041910:intron 20.0%
!!! TTTTACCAAGTAATTGAATT+GGG + chr7_1:79590550-79590569 None:intergenic 20.0%
!!! ATTTTACCAAGTAATTGAAT+TGG + chr7_1:79590551-79590570 None:intergenic 20.0%
!! ATTCAATTACTTGGTAAAAT+TGG - chr7_1:79590551-79590570 Msa1041910:intron 20.0%
!! AAGAAAACTAATTTAAGCAT+TGG - chr7_1:79590857-79590876 Msa1041910:CDS 20.0%
!!! TTTTTTTGATGATGGAAGAA+GGG + chr7_1:79589154-79589173 None:intergenic 25.0%
! TAAACATAGAAGGATATCAT+AGG - chr7_1:79589701-79589720 Msa1041910:CDS 25.0%
! TTATTGAATTTGGCAAAAGA+AGG + chr7_1:79590067-79590086 None:intergenic 25.0%
! TGAAGCAAAAAAATTCTAGT+GGG + chr7_1:79590133-79590152 None:intergenic 25.0%
! ATGAAGCAAAAAAATTCTAG+TGG + chr7_1:79590134-79590153 None:intergenic 25.0%
! TGGTTCAATTATCAATTGTA+TGG - chr7_1:79590165-79590184 Msa1041910:CDS 25.0%
! CAATTATCAATTGTATGGAA+AGG - chr7_1:79590170-79590189 Msa1041910:CDS 25.0%
!! AACTCTCAAATTCAGAATTT+TGG - chr7_1:79590318-79590337 Msa1041910:intron 25.0%
! TTATATTAGCAGTTAGAGAA+GGG + chr7_1:79590355-79590374 None:intergenic 25.0%
! TTAGCATATCTTGTAAAATC+AGG + chr7_1:79590407-79590426 None:intergenic 25.0%
! AGCCAAAATGATCAAATTAT+TGG - chr7_1:79590428-79590447 Msa1041910:intron 25.0%
!! GACCAATAATTTGATCATTT+TGG + chr7_1:79590433-79590452 None:intergenic 25.0%
! TTGTATTCAAGAAATCCTTA+TGG - chr7_1:79590884-79590903 Msa1041910:CDS 25.0%
! TTGTTGTCTATAATAATGCT+TGG - chr7_1:79591032-79591051 Msa1041910:CDS 25.0%
!!! TTTTTTTGATGATGGAAGAA+GGG + chr7_1:79589154-79589173 None:intergenic 25.0%
! TAAACATAGAAGGATATCAT+AGG - chr7_1:79589701-79589720 Msa1041910:CDS 25.0%
! TTATTGAATTTGGCAAAAGA+AGG + chr7_1:79590067-79590086 None:intergenic 25.0%
! TGAAGCAAAAAAATTCTAGT+GGG + chr7_1:79590133-79590152 None:intergenic 25.0%
! ATGAAGCAAAAAAATTCTAG+TGG + chr7_1:79590134-79590153 None:intergenic 25.0%
! TGGTTCAATTATCAATTGTA+TGG - chr7_1:79590165-79590184 Msa1041910:CDS 25.0%
! CAATTATCAATTGTATGGAA+AGG - chr7_1:79590170-79590189 Msa1041910:CDS 25.0%
!! AACTCTCAAATTCAGAATTT+TGG - chr7_1:79590318-79590337 Msa1041910:intron 25.0%
! TTATATTAGCAGTTAGAGAA+GGG + chr7_1:79590355-79590374 None:intergenic 25.0%
! TTAGCATATCTTGTAAAATC+AGG + chr7_1:79590407-79590426 None:intergenic 25.0%
! AGCCAAAATGATCAAATTAT+TGG - chr7_1:79590428-79590447 Msa1041910:intron 25.0%
!! GACCAATAATTTGATCATTT+TGG + chr7_1:79590433-79590452 None:intergenic 25.0%
! TTGTATTCAAGAAATCCTTA+TGG - chr7_1:79590884-79590903 Msa1041910:CDS 25.0%
! TTGTTGTCTATAATAATGCT+TGG - chr7_1:79591032-79591051 Msa1041910:CDS 25.0%
ATTGATGTGAGAGAATTAGT+TGG + chr7_1:79589093-79589112 None:intergenic 30.0%
!!! GTTTTTTTGATGATGGAAGA+AGG + chr7_1:79589155-79589174 None:intergenic 30.0%
AAACATTATTATGCAAGGCA+TGG + chr7_1:79589203-79589222 None:intergenic 30.0%
CGATGAAACATTATTATGCA+AGG + chr7_1:79589208-79589227 None:intergenic 30.0%
AGAAAAAGGGACTATAGAAT+TGG + chr7_1:79589238-79589257 None:intergenic 30.0%
CAAAACCATGTGAAGAAAAA+GGG + chr7_1:79589251-79589270 None:intergenic 30.0%
TCAAAACCATGTGAAGAAAA+AGG + chr7_1:79589252-79589271 None:intergenic 30.0%
TGAGAAAGATCAAAATCAGT+GGG + chr7_1:79589563-79589582 None:intergenic 30.0%
TTGAGAAAGATCAAAATCAG+TGG + chr7_1:79589564-79589583 None:intergenic 30.0%
ATAGATTCCTAACTATGTCT+TGG - chr7_1:79589587-79589606 Msa1041910:CDS 30.0%
TCAAAAACCAAGACATAGTT+AGG + chr7_1:79589597-79589616 None:intergenic 30.0%
! TATGCTATTTGCAAGTTCAA+AGG - chr7_1:79589638-79589657 Msa1041910:CDS 30.0%
CACAAAGTTAAGTGATTAGA+TGG - chr7_1:79589678-79589697 Msa1041910:CDS 30.0%
GATTAGATGGTAAACATAGA+AGG - chr7_1:79589691-79589710 Msa1041910:CDS 30.0%
TATTAGCTGCCAAACATATA+TGG - chr7_1:79589811-79589830 Msa1041910:CDS 30.0%
TATGGAATTGAAACATGGAT+TGG - chr7_1:79590026-79590045 Msa1041910:CDS 30.0%
GAAGCAAAAAAATTCTAGTG+GGG + chr7_1:79590132-79590151 None:intergenic 30.0%
ATTGTATGGAAAGGAATTGA+AGG - chr7_1:79590179-79590198 Msa1041910:CDS 30.0%
TTGTATGGAAAGGAATTGAA+GGG - chr7_1:79590180-79590199 Msa1041910:CDS 30.0%
GAAGTTAGTAGAATGAGTAT+TGG + chr7_1:79590233-79590252 None:intergenic 30.0%
TAACTTCCTTACTCTTGATT+TGG - chr7_1:79590246-79590265 Msa1041910:CDS 30.0%
ATATGACCAAATCAAGAGTA+AGG + chr7_1:79590255-79590274 None:intergenic 30.0%
ATTTGGTCATATGTTAAAGC+TGG - chr7_1:79590263-79590282 Msa1041910:CDS 30.0%
TTCTGAATTTGAGAGTTTAG+AGG + chr7_1:79590315-79590334 None:intergenic 30.0%
CTTATATTAGCAGTTAGAGA+AGG + chr7_1:79590356-79590375 None:intergenic 30.0%
CAATTACTTGGTAAAATTGG+TGG - chr7_1:79590554-79590573 Msa1041910:intron 30.0%
TTGTAAATCTTAGTCCAATG+TGG - chr7_1:79590669-79590688 Msa1041910:intron 30.0%
!! CTTCTAAAATTGAACCACAT+TGG + chr7_1:79590686-79590705 None:intergenic 30.0%
!! ATGTGGTTCAATTTTAGAAG+AGG - chr7_1:79590686-79590705 Msa1041910:intron 30.0%
TTTGTATATACTTGGCTAGT+TGG - chr7_1:79590776-79590795 Msa1041910:CDS 30.0%
ACTAGAATAATTCCTCCAAT+AGG + chr7_1:79590821-79590840 None:intergenic 30.0%
TATTGGAGGAATTATTCTAG+TGG - chr7_1:79590820-79590839 Msa1041910:CDS 30.0%
TTACACTAAGGGATTTAATG+TGG - chr7_1:79590916-79590935 Msa1041910:CDS 30.0%
!! TTTCTGCAGCATTGTTTTAT+TGG - chr7_1:79591068-79591087 Msa1041910:CDS 30.0%
ATTGATGTGAGAGAATTAGT+TGG + chr7_1:79589093-79589112 None:intergenic 30.0%
!!! GTTTTTTTGATGATGGAAGA+AGG + chr7_1:79589155-79589174 None:intergenic 30.0%
AAACATTATTATGCAAGGCA+TGG + chr7_1:79589203-79589222 None:intergenic 30.0%
CGATGAAACATTATTATGCA+AGG + chr7_1:79589208-79589227 None:intergenic 30.0%
AGAAAAAGGGACTATAGAAT+TGG + chr7_1:79589238-79589257 None:intergenic 30.0%
CAAAACCATGTGAAGAAAAA+GGG + chr7_1:79589251-79589270 None:intergenic 30.0%
TCAAAACCATGTGAAGAAAA+AGG + chr7_1:79589252-79589271 None:intergenic 30.0%
TGAGAAAGATCAAAATCAGT+GGG + chr7_1:79589563-79589582 None:intergenic 30.0%
TTGAGAAAGATCAAAATCAG+TGG + chr7_1:79589564-79589583 None:intergenic 30.0%
ATAGATTCCTAACTATGTCT+TGG - chr7_1:79589587-79589606 Msa1041910:CDS 30.0%
TCAAAAACCAAGACATAGTT+AGG + chr7_1:79589597-79589616 None:intergenic 30.0%
! TATGCTATTTGCAAGTTCAA+AGG - chr7_1:79589638-79589657 Msa1041910:CDS 30.0%
CACAAAGTTAAGTGATTAGA+TGG - chr7_1:79589678-79589697 Msa1041910:CDS 30.0%
GATTAGATGGTAAACATAGA+AGG - chr7_1:79589691-79589710 Msa1041910:CDS 30.0%
TATTAGCTGCCAAACATATA+TGG - chr7_1:79589811-79589830 Msa1041910:CDS 30.0%
TATGGAATTGAAACATGGAT+TGG - chr7_1:79590026-79590045 Msa1041910:CDS 30.0%
GAAGCAAAAAAATTCTAGTG+GGG + chr7_1:79590132-79590151 None:intergenic 30.0%
ATTGTATGGAAAGGAATTGA+AGG - chr7_1:79590179-79590198 Msa1041910:CDS 30.0%
TTGTATGGAAAGGAATTGAA+GGG - chr7_1:79590180-79590199 Msa1041910:CDS 30.0%
GAAGTTAGTAGAATGAGTAT+TGG + chr7_1:79590233-79590252 None:intergenic 30.0%
TAACTTCCTTACTCTTGATT+TGG - chr7_1:79590246-79590265 Msa1041910:CDS 30.0%
ATATGACCAAATCAAGAGTA+AGG + chr7_1:79590255-79590274 None:intergenic 30.0%
ATTTGGTCATATGTTAAAGC+TGG - chr7_1:79590263-79590282 Msa1041910:CDS 30.0%
TTCTGAATTTGAGAGTTTAG+AGG + chr7_1:79590315-79590334 None:intergenic 30.0%
CTTATATTAGCAGTTAGAGA+AGG + chr7_1:79590356-79590375 None:intergenic 30.0%
CAATTACTTGGTAAAATTGG+TGG - chr7_1:79590554-79590573 Msa1041910:intron 30.0%
TTGTAAATCTTAGTCCAATG+TGG - chr7_1:79590669-79590688 Msa1041910:intron 30.0%
!! CTTCTAAAATTGAACCACAT+TGG + chr7_1:79590686-79590705 None:intergenic 30.0%
!! ATGTGGTTCAATTTTAGAAG+AGG - chr7_1:79590686-79590705 Msa1041910:intron 30.0%
TTTGTATATACTTGGCTAGT+TGG - chr7_1:79590776-79590795 Msa1041910:CDS 30.0%
ACTAGAATAATTCCTCCAAT+AGG + chr7_1:79590821-79590840 None:intergenic 30.0%
TATTGGAGGAATTATTCTAG+TGG - chr7_1:79590820-79590839 Msa1041910:CDS 30.0%
TTACACTAAGGGATTTAATG+TGG - chr7_1:79590916-79590935 Msa1041910:CDS 30.0%
!! TTTCTGCAGCATTGTTTTAT+TGG - chr7_1:79591068-79591087 Msa1041910:CDS 30.0%
GACATTGAAGTTGAGACATT+TGG + chr7_1:79589058-79589077 None:intergenic 35.0%
! ATAGTCCCTTTTTCTTCACA+TGG - chr7_1:79589243-79589262 Msa1041910:CDS 35.0%
AGATCATCATTGGTAAGTGT+GGG + chr7_1:79589288-79589307 None:intergenic 35.0%
AAGATCATCATTGGTAAGTG+TGG + chr7_1:79589289-79589308 None:intergenic 35.0%
! AGTTGGCTTAAGATCATCAT+TGG + chr7_1:79589298-79589317 None:intergenic 35.0%
TACCAGCAAGGTAATAAGAA+GGG + chr7_1:79589389-79589408 None:intergenic 35.0%
GGGAACAAAAAGGATAATGT+TGG + chr7_1:79589466-79589485 None:intergenic 35.0%
CGTCGTCAACTTAAAATCTA+TGG - chr7_1:79589885-79589904 Msa1041910:CDS 35.0%
AAAGATGATCTAGCAAGAAC+CGG + chr7_1:79589948-79589967 None:intergenic 35.0%
! GTTCTTGCTAGATCATCTTT+TGG - chr7_1:79589948-79589967 Msa1041910:CDS 35.0%
!!! AGATCATCTTTTGGAATCCA+TGG - chr7_1:79589957-79589976 Msa1041910:CDS 35.0%
GTTGGTATGGAATTGAAACA+TGG - chr7_1:79590021-79590040 Msa1041910:CDS 35.0%
CATTGTCAAAATCTCTACCT+TGG - chr7_1:79590096-79590115 Msa1041910:CDS 35.0%
! TTTTTGCTTCATAGCCTTCA+TGG - chr7_1:79590142-79590161 Msa1041910:CDS 35.0%
TGATAATTGAACCACCATGA+AGG + chr7_1:79590159-79590178 None:intergenic 35.0%
!! TATGTTAAAGCTGGTGGATT+TGG - chr7_1:79590272-79590291 Msa1041910:CDS 35.0%
GATCAAATTATTGGTCAAGC+TGG - chr7_1:79590437-79590456 Msa1041910:intron 35.0%
!!! AGCTGGTCTTCCTATTTTTA+TGG - chr7_1:79590454-79590473 Msa1041910:intron 35.0%
!!! GCTGGTCTTCCTATTTTTAT+GGG - chr7_1:79590455-79590474 Msa1041910:intron 35.0%
GTGAATGCACCCATAAAAAT+AGG + chr7_1:79590467-79590486 None:intergenic 35.0%
TCCAACCCAATTCAATTACT+TGG - chr7_1:79590542-79590561 Msa1041910:intron 35.0%
ACCAAGTAATTGAATTGGGT+TGG + chr7_1:79590546-79590565 None:intergenic 35.0%
ACTACAATCTTAGCCATTCT+TGG - chr7_1:79590584-79590603 Msa1041910:intron 35.0%
! TGTTGGTTGTAATTGTAGCT+AGG + chr7_1:79590616-79590635 None:intergenic 35.0%
!! AGATTTACAAGAGCATTTGC+AGG + chr7_1:79590659-79590678 None:intergenic 35.0%
GCTATACTAACAGCATTTCT+TGG - chr7_1:79590710-79590729 Msa1041910:CDS 35.0%
! GTGAGAGCTTTGTATATACT+TGG - chr7_1:79590768-79590787 Msa1041910:CDS 35.0%
AGTTGGTTATTCTGCATTGA+TGG - chr7_1:79590793-79590812 Msa1041910:CDS 35.0%
! GTTGGTTATTCTGCATTGAT+GGG - chr7_1:79590794-79590813 Msa1041910:CDS 35.0%
GTGTAATAGTAAGCACCATA+AGG + chr7_1:79590902-79590921 None:intergenic 35.0%
TGGTGCTTACTATTACACTA+AGG - chr7_1:79590904-79590923 Msa1041910:CDS 35.0%
GGTGCTTACTATTACACTAA+GGG - chr7_1:79590905-79590924 Msa1041910:CDS 35.0%
ATTTAATGTGGCAGCAATTG+TGG - chr7_1:79590928-79590947 Msa1041910:CDS 35.0%
CCAACTTTATGCAAAAAACC+AGG + chr7_1:79590983-79591002 None:intergenic 35.0%
!!! CCTGGTTTTTTGCATAAAGT+TGG - chr7_1:79590980-79590999 Msa1041910:CDS 35.0%
GTCGAGTTTGAGAAAGAAAT+TGG - chr7_1:79591096-79591115 Msa1041910:CDS 35.0%
GACATTGAAGTTGAGACATT+TGG + chr7_1:79589058-79589077 None:intergenic 35.0%
! ATAGTCCCTTTTTCTTCACA+TGG - chr7_1:79589243-79589262 Msa1041910:CDS 35.0%
AGATCATCATTGGTAAGTGT+GGG + chr7_1:79589288-79589307 None:intergenic 35.0%
AAGATCATCATTGGTAAGTG+TGG + chr7_1:79589289-79589308 None:intergenic 35.0%
! AGTTGGCTTAAGATCATCAT+TGG + chr7_1:79589298-79589317 None:intergenic 35.0%
TACCAGCAAGGTAATAAGAA+GGG + chr7_1:79589389-79589408 None:intergenic 35.0%
GGGAACAAAAAGGATAATGT+TGG + chr7_1:79589466-79589485 None:intergenic 35.0%
CGTCGTCAACTTAAAATCTA+TGG - chr7_1:79589885-79589904 Msa1041910:CDS 35.0%
AAAGATGATCTAGCAAGAAC+CGG + chr7_1:79589948-79589967 None:intergenic 35.0%
! GTTCTTGCTAGATCATCTTT+TGG - chr7_1:79589948-79589967 Msa1041910:CDS 35.0%
!!! AGATCATCTTTTGGAATCCA+TGG - chr7_1:79589957-79589976 Msa1041910:CDS 35.0%
GTTGGTATGGAATTGAAACA+TGG - chr7_1:79590021-79590040 Msa1041910:CDS 35.0%
CATTGTCAAAATCTCTACCT+TGG - chr7_1:79590096-79590115 Msa1041910:CDS 35.0%
! TTTTTGCTTCATAGCCTTCA+TGG - chr7_1:79590142-79590161 Msa1041910:CDS 35.0%
TGATAATTGAACCACCATGA+AGG + chr7_1:79590159-79590178 None:intergenic 35.0%
!! TATGTTAAAGCTGGTGGATT+TGG - chr7_1:79590272-79590291 Msa1041910:CDS 35.0%
GATCAAATTATTGGTCAAGC+TGG - chr7_1:79590437-79590456 Msa1041910:intron 35.0%
!!! AGCTGGTCTTCCTATTTTTA+TGG - chr7_1:79590454-79590473 Msa1041910:intron 35.0%
!!! GCTGGTCTTCCTATTTTTAT+GGG - chr7_1:79590455-79590474 Msa1041910:intron 35.0%
GTGAATGCACCCATAAAAAT+AGG + chr7_1:79590467-79590486 None:intergenic 35.0%
TCCAACCCAATTCAATTACT+TGG - chr7_1:79590542-79590561 Msa1041910:intron 35.0%
ACCAAGTAATTGAATTGGGT+TGG + chr7_1:79590546-79590565 None:intergenic 35.0%
ACTACAATCTTAGCCATTCT+TGG - chr7_1:79590584-79590603 Msa1041910:intron 35.0%
! TGTTGGTTGTAATTGTAGCT+AGG + chr7_1:79590616-79590635 None:intergenic 35.0%
!! AGATTTACAAGAGCATTTGC+AGG + chr7_1:79590659-79590678 None:intergenic 35.0%
GCTATACTAACAGCATTTCT+TGG - chr7_1:79590710-79590729 Msa1041910:CDS 35.0%
! GTGAGAGCTTTGTATATACT+TGG - chr7_1:79590768-79590787 Msa1041910:CDS 35.0%
AGTTGGTTATTCTGCATTGA+TGG - chr7_1:79590793-79590812 Msa1041910:CDS 35.0%
! GTTGGTTATTCTGCATTGAT+GGG - chr7_1:79590794-79590813 Msa1041910:CDS 35.0%
GTGTAATAGTAAGCACCATA+AGG + chr7_1:79590902-79590921 None:intergenic 35.0%
TGGTGCTTACTATTACACTA+AGG - chr7_1:79590904-79590923 Msa1041910:CDS 35.0%
GGTGCTTACTATTACACTAA+GGG - chr7_1:79590905-79590924 Msa1041910:CDS 35.0%
ATTTAATGTGGCAGCAATTG+TGG - chr7_1:79590928-79590947 Msa1041910:CDS 35.0%
CCAACTTTATGCAAAAAACC+AGG + chr7_1:79590983-79591002 None:intergenic 35.0%
!!! CCTGGTTTTTTGCATAAAGT+TGG - chr7_1:79590980-79590999 Msa1041910:CDS 35.0%
GTCGAGTTTGAGAAAGAAAT+TGG - chr7_1:79591096-79591115 Msa1041910:CDS 35.0%
GTAAGAGAGTTAGAGAGCTT+TGG + chr7_1:79589132-79589151 None:intergenic 40.0%
!! CTAGCCAAAGGACTTTTTCT+GGG - chr7_1:79589322-79589341 Msa1041910:CDS 40.0%
!! GACTTTTTCTGGGTTGGAAA+TGG - chr7_1:79589332-79589351 Msa1041910:CDS 40.0%
CTACCAGCAAGGTAATAAGA+AGG + chr7_1:79589390-79589409 None:intergenic 40.0%
ACTGGTCATCCAGGTATAAA+GGG - chr7_1:79589495-79589514 Msa1041910:CDS 40.0%
TTGATCCATCCCTTTATACC+TGG + chr7_1:79589507-79589526 None:intergenic 40.0%
GCGTTATGGCATATCATTTC+CGG - chr7_1:79589926-79589945 Msa1041910:CDS 40.0%
! TCACATTCCCACCCTTTTAA+GGG - chr7_1:79589983-79590002 Msa1041910:CDS 40.0%
ACCAACTAAGGCCCTTAAAA+GGG + chr7_1:79589997-79590016 None:intergenic 40.0%
AACCAACTAAGGCCCTTAAA+AGG + chr7_1:79589998-79590017 None:intergenic 40.0%
ATACCAACCACAACCAACTA+AGG + chr7_1:79590009-79590028 None:intergenic 40.0%
! TTAGTTGGTTGTGGTTGGTA+TGG - chr7_1:79590008-79590027 Msa1041910:CDS 40.0%
!! GGAATTGAAACATGGATTGG+TGG - chr7_1:79590029-79590048 Msa1041910:CDS 40.0%
TCAAAATCTCTACCTTGGCT+TGG - chr7_1:79590101-79590120 Msa1041910:CDS 40.0%
TGGTCATATGTTAAAGCTGG+TGG - chr7_1:79590266-79590285 Msa1041910:CDS 40.0%
ATGGGTGCATTCACATTTGT+TGG - chr7_1:79590473-79590492 Msa1041910:intron 40.0%
AGCTAGGCTTATACCAAGAA+TGG + chr7_1:79590600-79590619 None:intergenic 40.0%
TACAACATTGGCAGCAATGT+TGG + chr7_1:79590633-79590652 None:intergenic 40.0%
! ATTTGCAGGTGCTACAACAT+TGG + chr7_1:79590645-79590664 None:intergenic 40.0%
TTGGAGTTGCATTTCAACCT+TGG - chr7_1:79590729-79590748 Msa1041910:CDS 40.0%
CTTGACTTAAGAAGCTTCCA+AGG + chr7_1:79590749-79590768 None:intergenic 40.0%
TGCAAAAAACCAGGAATCAC+AGG + chr7_1:79590974-79590993 None:intergenic 40.0%
GTAAGAGAGTTAGAGAGCTT+TGG + chr7_1:79589132-79589151 None:intergenic 40.0%
!! CTAGCCAAAGGACTTTTTCT+GGG - chr7_1:79589322-79589341 Msa1041910:CDS 40.0%
!! GACTTTTTCTGGGTTGGAAA+TGG - chr7_1:79589332-79589351 Msa1041910:CDS 40.0%
CTACCAGCAAGGTAATAAGA+AGG + chr7_1:79589390-79589409 None:intergenic 40.0%
ACTGGTCATCCAGGTATAAA+GGG - chr7_1:79589495-79589514 Msa1041910:CDS 40.0%
TTGATCCATCCCTTTATACC+TGG + chr7_1:79589507-79589526 None:intergenic 40.0%
GCGTTATGGCATATCATTTC+CGG - chr7_1:79589926-79589945 Msa1041910:CDS 40.0%
! TCACATTCCCACCCTTTTAA+GGG - chr7_1:79589983-79590002 Msa1041910:CDS 40.0%
ACCAACTAAGGCCCTTAAAA+GGG + chr7_1:79589997-79590016 None:intergenic 40.0%
AACCAACTAAGGCCCTTAAA+AGG + chr7_1:79589998-79590017 None:intergenic 40.0%
ATACCAACCACAACCAACTA+AGG + chr7_1:79590009-79590028 None:intergenic 40.0%
! TTAGTTGGTTGTGGTTGGTA+TGG - chr7_1:79590008-79590027 Msa1041910:CDS 40.0%
!! GGAATTGAAACATGGATTGG+TGG - chr7_1:79590029-79590048 Msa1041910:CDS 40.0%
TCAAAATCTCTACCTTGGCT+TGG - chr7_1:79590101-79590120 Msa1041910:CDS 40.0%
TGGTCATATGTTAAAGCTGG+TGG - chr7_1:79590266-79590285 Msa1041910:CDS 40.0%
ATGGGTGCATTCACATTTGT+TGG - chr7_1:79590473-79590492 Msa1041910:intron 40.0%
AGCTAGGCTTATACCAAGAA+TGG + chr7_1:79590600-79590619 None:intergenic 40.0%
TACAACATTGGCAGCAATGT+TGG + chr7_1:79590633-79590652 None:intergenic 40.0%
! ATTTGCAGGTGCTACAACAT+TGG + chr7_1:79590645-79590664 None:intergenic 40.0%
TTGGAGTTGCATTTCAACCT+TGG - chr7_1:79590729-79590748 Msa1041910:CDS 40.0%
CTTGACTTAAGAAGCTTCCA+AGG + chr7_1:79590749-79590768 None:intergenic 40.0%
TGCAAAAAACCAGGAATCAC+AGG + chr7_1:79590974-79590993 None:intergenic 40.0%
TCATTGGTAAGTGTGGGATC+AGG + chr7_1:79589282-79589301 None:intergenic 45.0%
CCAGAAAAAGTCCTTTGGCT+AGG + chr7_1:79589324-79589343 None:intergenic 45.0%
!! CCTAGCCAAAGGACTTTTTC+TGG - chr7_1:79589321-79589340 Msa1041910:CDS 45.0%
CCAACCCAGAAAAAGTCCTT+TGG + chr7_1:79589329-79589348 None:intergenic 45.0%
!! CCAAAGGACTTTTTCTGGGT+TGG - chr7_1:79589326-79589345 Msa1041910:CDS 45.0%
!! GTTGGAAATGGCTAGCCTTT+GGG - chr7_1:79589344-79589363 Msa1041910:CDS 45.0%
!! CTTTGGGTAGGACTTGTTGT+GGG - chr7_1:79589360-79589379 Msa1041910:CDS 45.0%
GTCCCTTCTTATTACCTTGC+TGG - chr7_1:79589384-79589403 Msa1041910:CDS 45.0%
!! CTGGTAGCCTTGTTGATCTT+GGG - chr7_1:79589403-79589422 Msa1041910:CDS 45.0%
!! TAGCCTTGTTGATCTTGGGA+TGG - chr7_1:79589407-79589426 Msa1041910:CDS 45.0%
AAGCCATCCCAAGATCAACA+AGG + chr7_1:79589413-79589432 None:intergenic 45.0%
TTGTTGATCTTGGGATGGCT+TGG - chr7_1:79589412-79589431 Msa1041910:CDS 45.0%
TGAGGATCAGGGGAACAAAA+AGG + chr7_1:79589476-79589495 None:intergenic 45.0%
TTATACCTGGATGACCAGTG+AGG + chr7_1:79589494-79589513 None:intergenic 45.0%
CACTGGTCATCCAGGTATAA+AGG - chr7_1:79589494-79589513 Msa1041910:CDS 45.0%
GTCATCCAGGTATAAAGGGA+TGG - chr7_1:79589499-79589518 Msa1041910:CDS 45.0%
ATCTATGGATCCGTTACTGC+AGG - chr7_1:79589900-79589919 Msa1041910:CDS 45.0%
ATAACGCGTACCTGCAGTAA+CGG + chr7_1:79589913-79589932 None:intergenic 45.0%
! CTCACATTCCCACCCTTTTA+AGG - chr7_1:79589982-79590001 Msa1041910:CDS 45.0%
ACTAAGGCCCTTAAAAGGGT+GGG + chr7_1:79589993-79590012 None:intergenic 45.0%
AACTAAGGCCCTTAAAAGGG+TGG + chr7_1:79589994-79590013 None:intergenic 45.0%
!! ACCCTTTTAAGGGCCTTAGT+TGG - chr7_1:79589993-79590012 Msa1041910:CDS 45.0%
TTAAGGGCCTTAGTTGGTTG+TGG - chr7_1:79589999-79590018 Msa1041910:CDS 45.0%
TTGCTTCATAGCCTTCATGG+TGG - chr7_1:79590145-79590164 Msa1041910:CDS 45.0%
! TCTGCATTGATGGGTCCTAT+TGG - chr7_1:79590803-79590822 Msa1041910:CDS 45.0%
GGAATCTTACCTGTGATTCC+TGG - chr7_1:79590962-79590981 Msa1041910:CDS 45.0%
TCATTGGTAAGTGTGGGATC+AGG + chr7_1:79589282-79589301 None:intergenic 45.0%
CCAGAAAAAGTCCTTTGGCT+AGG + chr7_1:79589324-79589343 None:intergenic 45.0%
!! CCTAGCCAAAGGACTTTTTC+TGG - chr7_1:79589321-79589340 Msa1041910:CDS 45.0%
CCAACCCAGAAAAAGTCCTT+TGG + chr7_1:79589329-79589348 None:intergenic 45.0%
!! CCAAAGGACTTTTTCTGGGT+TGG - chr7_1:79589326-79589345 Msa1041910:CDS 45.0%
!! GTTGGAAATGGCTAGCCTTT+GGG - chr7_1:79589344-79589363 Msa1041910:CDS 45.0%
!! CTTTGGGTAGGACTTGTTGT+GGG - chr7_1:79589360-79589379 Msa1041910:CDS 45.0%
GTCCCTTCTTATTACCTTGC+TGG - chr7_1:79589384-79589403 Msa1041910:CDS 45.0%
!! CTGGTAGCCTTGTTGATCTT+GGG - chr7_1:79589403-79589422 Msa1041910:CDS 45.0%
!! TAGCCTTGTTGATCTTGGGA+TGG - chr7_1:79589407-79589426 Msa1041910:CDS 45.0%
AAGCCATCCCAAGATCAACA+AGG + chr7_1:79589413-79589432 None:intergenic 45.0%
TTGTTGATCTTGGGATGGCT+TGG - chr7_1:79589412-79589431 Msa1041910:CDS 45.0%
TGAGGATCAGGGGAACAAAA+AGG + chr7_1:79589476-79589495 None:intergenic 45.0%
TTATACCTGGATGACCAGTG+AGG + chr7_1:79589494-79589513 None:intergenic 45.0%
CACTGGTCATCCAGGTATAA+AGG - chr7_1:79589494-79589513 Msa1041910:CDS 45.0%
GTCATCCAGGTATAAAGGGA+TGG - chr7_1:79589499-79589518 Msa1041910:CDS 45.0%
ATCTATGGATCCGTTACTGC+AGG - chr7_1:79589900-79589919 Msa1041910:CDS 45.0%
ATAACGCGTACCTGCAGTAA+CGG + chr7_1:79589913-79589932 None:intergenic 45.0%
! CTCACATTCCCACCCTTTTA+AGG - chr7_1:79589982-79590001 Msa1041910:CDS 45.0%
ACTAAGGCCCTTAAAAGGGT+GGG + chr7_1:79589993-79590012 None:intergenic 45.0%
AACTAAGGCCCTTAAAAGGG+TGG + chr7_1:79589994-79590013 None:intergenic 45.0%
!! ACCCTTTTAAGGGCCTTAGT+TGG - chr7_1:79589993-79590012 Msa1041910:CDS 45.0%
TTAAGGGCCTTAGTTGGTTG+TGG - chr7_1:79589999-79590018 Msa1041910:CDS 45.0%
TTGCTTCATAGCCTTCATGG+TGG - chr7_1:79590145-79590164 Msa1041910:CDS 45.0%
! TCTGCATTGATGGGTCCTAT+TGG - chr7_1:79590803-79590822 Msa1041910:CDS 45.0%
GGAATCTTACCTGTGATTCC+TGG - chr7_1:79590962-79590981 Msa1041910:CDS 45.0%
!!! GGCATGGTTTTGTGCATGGA+AGG + chr7_1:79589187-79589206 None:intergenic 50.0%
!!! GCAAGGCATGGTTTTGTGCA+TGG + chr7_1:79589191-79589210 None:intergenic 50.0%
AGCCAACTACACCTAGCCAA+AGG - chr7_1:79589310-79589329 Msa1041910:CDS 50.0%
GTCCTTTGGCTAGGTGTAGT+TGG + chr7_1:79589315-79589334 None:intergenic 50.0%
!! GGTTGGAAATGGCTAGCCTT+TGG - chr7_1:79589343-79589362 Msa1041910:CDS 50.0%
!! GAAATGGCTAGCCTTTGGGT+AGG - chr7_1:79589348-79589367 Msa1041910:CDS 50.0%
CCACAACAAGTCCTACCCAA+AGG + chr7_1:79589362-79589381 None:intergenic 50.0%
!! CCTTTGGGTAGGACTTGTTG+TGG - chr7_1:79589359-79589378 Msa1041910:CDS 50.0%
GATCAACAAGGCTACCAGCA+AGG + chr7_1:79589401-79589420 None:intergenic 50.0%
!! GCTGGTAGCCTTGTTGATCT+TGG - chr7_1:79589402-79589421 Msa1041910:CDS 50.0%
! TTGATCTTGGGATGGCTTGG+TGG - chr7_1:79589415-79589434 Msa1041910:CDS 50.0%
! TTGGTGGCAAGGCATAGCTA+CGG - chr7_1:79589431-79589450 Msa1041910:CDS 50.0%
TTTGTTCCCCTGATCCTCAC+TGG - chr7_1:79589477-79589496 Msa1041910:CDS 50.0%
TGGATGACCAGTGAGGATCA+GGG + chr7_1:79589487-79589506 None:intergenic 50.0%
GTTACTGCAGGTACGCGTTA+TGG - chr7_1:79589912-79589931 Msa1041910:CDS 50.0%
! GCATTGATGGGTCCTATTGG+AGG - chr7_1:79590806-79590825 Msa1041910:CDS 50.0%
!! GCAATTGTGGCTCTAGTCGT+TGG - chr7_1:79590941-79590960 Msa1041910:CDS 50.0%
!!! GGCATGGTTTTGTGCATGGA+AGG + chr7_1:79589187-79589206 None:intergenic 50.0%
!!! GCAAGGCATGGTTTTGTGCA+TGG + chr7_1:79589191-79589210 None:intergenic 50.0%
AGCCAACTACACCTAGCCAA+AGG - chr7_1:79589310-79589329 Msa1041910:CDS 50.0%
GTCCTTTGGCTAGGTGTAGT+TGG + chr7_1:79589315-79589334 None:intergenic 50.0%
!! GGTTGGAAATGGCTAGCCTT+TGG - chr7_1:79589343-79589362 Msa1041910:CDS 50.0%
!! GAAATGGCTAGCCTTTGGGT+AGG - chr7_1:79589348-79589367 Msa1041910:CDS 50.0%
CCACAACAAGTCCTACCCAA+AGG + chr7_1:79589362-79589381 None:intergenic 50.0%
!! CCTTTGGGTAGGACTTGTTG+TGG - chr7_1:79589359-79589378 Msa1041910:CDS 50.0%
GATCAACAAGGCTACCAGCA+AGG + chr7_1:79589401-79589420 None:intergenic 50.0%
!! GCTGGTAGCCTTGTTGATCT+TGG - chr7_1:79589402-79589421 Msa1041910:CDS 50.0%
! TTGATCTTGGGATGGCTTGG+TGG - chr7_1:79589415-79589434 Msa1041910:CDS 50.0%
! TTGGTGGCAAGGCATAGCTA+CGG - chr7_1:79589431-79589450 Msa1041910:CDS 50.0%
TTTGTTCCCCTGATCCTCAC+TGG - chr7_1:79589477-79589496 Msa1041910:CDS 50.0%
TGGATGACCAGTGAGGATCA+GGG + chr7_1:79589487-79589506 None:intergenic 50.0%
GTTACTGCAGGTACGCGTTA+TGG - chr7_1:79589912-79589931 Msa1041910:CDS 50.0%
! GCATTGATGGGTCCTATTGG+AGG - chr7_1:79590806-79590825 Msa1041910:CDS 50.0%
!! GCAATTGTGGCTCTAGTCGT+TGG - chr7_1:79590941-79590960 Msa1041910:CDS 50.0%
GGATGACCAGTGAGGATCAG+GGG + chr7_1:79589486-79589505 None:intergenic 55.0%
CTGGATGACCAGTGAGGATC+AGG + chr7_1:79589488-79589507 None:intergenic 55.0%
CTGATCCTCACTGGTCATCC+AGG - chr7_1:79589486-79589505 Msa1041910:CDS 55.0%
GGGCCTTAGTTGGTTGTGGT+TGG - chr7_1:79590003-79590022 Msa1041910:CDS 55.0%
GGATGACCAGTGAGGATCAG+GGG + chr7_1:79589486-79589505 None:intergenic 55.0%
CTGGATGACCAGTGAGGATC+AGG + chr7_1:79589488-79589507 None:intergenic 55.0%
CTGATCCTCACTGGTCATCC+AGG - chr7_1:79589486-79589505 Msa1041910:CDS 55.0%
GGGCCTTAGTTGGTTGTGGT+TGG - chr7_1:79590003-79590022 Msa1041910:CDS 55.0%
!! CTTGGGATGGCTTGGTGGCA+AGG - chr7_1:79589420-79589439 Msa1041910:CDS 60.0%
GTGGCAAGGCATAGCTACGG+TGG - chr7_1:79589434-79589453 Msa1041910:CDS 60.0%
GGGTGGGAATGTGAGCACCA+TGG + chr7_1:79589977-79589996 None:intergenic 60.0%
!! AGTGGGGAAGTGCCAAGCCA+AGG + chr7_1:79590116-79590135 None:intergenic 60.0%
!! CTTGGGATGGCTTGGTGGCA+AGG - chr7_1:79589420-79589439 Msa1041910:CDS 60.0%
GTGGCAAGGCATAGCTACGG+TGG - chr7_1:79589434-79589453 Msa1041910:CDS 60.0%
GGGTGGGAATGTGAGCACCA+TGG + chr7_1:79589977-79589996 None:intergenic 60.0%
!! AGTGGGGAAGTGCCAAGCCA+AGG + chr7_1:79590116-79590135 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 79589048 79591165 79589048 ID=Msa1041910;Name=Msa1041910
chr7_1 mRNA 79589048 79591165 79589048 ID=Msa1041910-mRNA-1;Parent=Msa1041910;Name=Msa1041910-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|567
chr7_1 exon 79590706 79591165 79590706 ID=Msa1041910-mRNA-1:exon:21587;Parent=Msa1041910-mRNA-1
chr7_1 exon 79589048 79590291 79589048 ID=Msa1041910-mRNA-1:exon:21586;Parent=Msa1041910-mRNA-1
chr7_1 CDS 79590706 79591165 79590706 ID=Msa1041910-mRNA-1:cds;Parent=Msa1041910-mRNA-1
chr7_1 CDS 79589048 79590291 79589048 ID=Msa1041910-mRNA-1:cds;Parent=Msa1041910-mRNA-1
Gene Sequence

>Msa1041910

ATGGTATCCAAATGTCTCAACTTCAATGTCTCTTCTTCTCATCCAACTAATTCTCTCACATCAATTTCAAATTCAAAATATCCAAAGCTCTCTAACTCTCTTACCCTTCTTCCATCATCAAAAAAACTAAACAAGACCTTCCATGCACAAAACCATGCCTTGCATAATAATGTTTCATCGAGATACTCCAATTCTATAGTCCCTTTTTCTTCACATGGTTTTGAAATAGAGCCTGATCCCACACTTACCAATGATGATCTTAAGCCAACTACACCTAGCCAAAGGACTTTTTCTGGGTTGGAAATGGCTAGCCTTTGGGTAGGACTTGTTGTGGGAGTCCCTTCTTATTACCTTGCTGGTAGCCTTGTTGATCTTGGGATGGCTTGGTGGCAAGGCATAGCTACGGTGGTTGCAGCCAACATTATCCTTTTTGTTCCCCTGATCCTCACTGGTCATCCAGGTACGCGTTATGGCATATCATTTCCGGTTCTTGCTAGATCATCTTTTGGAATCCATGGTGCTCACATTCCCACCCTTTTAAGGGCCTTAGTTGGTTGTGGTTGGTATGGAATTGAAACATGGATTGGTGGAGAGACAATTTTCCTTCTTTTGCCAAATTCAATAAAACAAAGTACATTGTCAAAATCTCTACCTTGGCTTGGCACTTCCCCACTAGAATTTTTTTGCTTCATAGCCTTCATGGTGGTTCAATTATCAATTGTATGGAAAGGAATTGAAGGGATTAGAGAGCTTGAGAAGTACTCAGCTCCAATACTCATTCTACTAACTTCCTTACTCTTGATTTGGTCATATGTTAAAGCTGGTGGATTTGGTCACATGCTCTCTTTATCCTCTAAACTCTCAAATTCAGAATTTTGGTCTTTATTCTTCCCTTCTCTAACTGCTAATATAAGTTTTTGGGCTGCTCTAGCTCTTAACATACCTGATTTTACAAGATATGCTAAGAGCCAAAATGATCAAATTATTGGTCAAGCTGGTCTTCCTATTTTTATGGGTGCATTCACATTTGTTGGTATAGTAGTAACATCATCAACAAAAATTATATTTGGTCATGTTATTTCCAACCCAATTCAATTACTTGGTAAAATTGGTGGATTTGTAACTACAATCTTAGCCATTCTTGGTATAAGCCTAGCTACAATTACAACCAACATTGCTGCCAATGTTGTAGCACCTGCAAATGCTCTTGTAAATCTTAGTCCAATGTGGTTCAATTTTAGAAGAGGAGCTATACTAACAGCATTTCTTGGAGTTGCATTTCAACCTTGGAAGCTTCTTAAGTCAAGTGAGAGCTTTGTATATACTTGGCTAGTTGGTTATTCTGCATTGATGGGTCCTATTGGAGGAATTATTCTAGTGGATTATTATCTTGTGAAGAAAACTAATTTAAGCATTGGAGATTTGTATTCAAGAAATCCTTATGGTGCTTACTATTACACTAAGGGATTTAATGTGGCAGCAATTGTGGCTCTAGTCGTTGGAATCTTACCTGTGATTCCTGGTTTTTTGCATAAAGTTGGAATGTTACAATCAGTTTCAGAAACTTTTGTTGTTGTCTATAATAATGCTTGGTTTGTTAGCTTCTTTTCTGCAGCATTGTTTTATTGGATTCTGTCGAGTTTGAGAAAGAAATTGGATGAATCTGCTGCTGCTAGAGACAATTCTTTACATTCTCCCCAGTAA

Protein sequence

>Msa1041910

MVSKCLNFNVSSSHPTNSLTSISNSKYPKLSNSLTLLPSSKKLNKTFHAQNHALHNNVSSRYSNSIVPFSSHGFEIEPDPTLTNDDLKPTTPSQRTFSGLEMASLWVGLVVGVPSYYLAGSLVDLGMAWWQGIATVVAANIILFVPLILTGHPGTRYGISFPVLARSSFGIHGAHIPTLLRALVGCGWYGIETWIGGETIFLLLPNSIKQSTLSKSLPWLGTSPLEFFCFIAFMVVQLSIVWKGIEGIRELEKYSAPILILLTSLLLIWSYVKAGGFGHMLSLSSKLSNSEFWSLFFPSLTANISFWAALALNIPDFTRYAKSQNDQIIGQAGLPIFMGAFTFVGIVVTSSTKIIFGHVISNPIQLLGKIGGFVTTILAILGISLATITTNIAANVVAPANALVNLSPMWFNFRRGAILTAFLGVAFQPWKLLKSSESFVYTWLVGYSALMGPIGGIILVDYYLVKKTNLSIGDLYSRNPYGAYYYTKGFNVAAIVALVVGILPVIPGFLHKVGMLQSVSETFVVVYNNAWFVSFFSAALFYWILSSLRKKLDESAAARDNSLHSPQ*