AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1167960


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167960 MtrunA17_Chr7g0265231 95.204 563 23 3 1 562 1 560 0.0 967
Msa1167960 MtrunA17_Chr1g0179791 81.429 490 88 2 68 556 89 576 0.0 789
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1167960 AT5G03555.1 66.610 587 160 5 1 551 1 587 0.0 721

Find 113 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACTCTCAAATTCAGAATTT+TGG 0.140261 7_4:-60510018 Msa1167960:CDS
GACCAATAATTTGATCATTT+TGG 0.164424 7_4:+60509906 None:intergenic
ATTCAATTACTTGGTAAAAT+TGG 0.174264 7_4:-60509785 Msa1167960:CDS
GTCGAGTTTGAGAAAGAAAT+TGG 0.200651 7_4:-60509240 Msa1167960:CDS
TCAAAACCATGTGAAGAAAA+AGG 0.227962 7_4:+60511084 None:intergenic
AACCAACTAAGGCCCTTAAA+AGG 0.233275 7_4:+60510341 None:intergenic
ATTGATGTGAGAGAATTATT+TGG 0.258896 7_4:+60511243 None:intergenic
GCGTTATGGCATATCATTTC+CGG 0.270782 7_4:-60510410 Msa1167960:CDS
GCTGGTAGCCTTGTTGATCT+TGG 0.274985 7_4:-60510931 Msa1167960:CDS
GACATTGAAGTTGAGACATT+TGG 0.280390 7_4:+60511278 None:intergenic
AGCCAAAATGATCAAATTAT+TGG 0.283409 7_4:-60509908 Msa1167960:CDS
ACTACAATCTTAGCCATTCT+TGG 0.289747 7_4:-60509752 Msa1167960:CDS
AGTTGGTTATTCTGCATTGA+TGG 0.294801 7_4:-60509543 Msa1167960:CDS
GTTCTTGCTAGATCATCTTT+TGG 0.301411 7_4:-60510388 Msa1167960:CDS
TAACTTCCTTACTCTTGATT+TGG 0.301911 7_4:-60510090 Msa1167960:CDS
GTCCCTTCTTATTACCTTGC+TGG 0.309994 7_4:-60510949 Msa1167960:CDS
TCTGCATTGATGGGTCCTAT+TGG 0.319696 7_4:-60509533 Msa1167960:CDS
GGTTGGAAATGGCTAGCCTT+TGG 0.321023 7_4:-60510990 Msa1167960:CDS
GCTATACTAACAGCATTTCT+TGG 0.321556 7_4:-60509626 Msa1167960:CDS
TATGTTAAAGCTGGTGGATT+TGG 0.325791 7_4:-60510064 Msa1167960:CDS
TTCTGAATTTGAGAGTTTAG+AGG 0.335043 7_4:+60510024 None:intergenic
CTGGTAGCCTTGTTGATCTT+GGG 0.344293 7_4:-60510930 Msa1167960:CDS
ATGGGTGCATTCACATTTGT+TGG 0.354383 7_4:-60509863 Msa1167960:CDS
GTTGGAAATGGCTAGCCTTT+GGG 0.357707 7_4:-60510989 Msa1167960:CDS
TTTGTATATACTTGGCTAGT+TGG 0.361674 7_4:-60509560 Msa1167960:CDS
CTGGATGACCAGTGAGGATC+AGG 0.366293 7_4:+60510848 None:intergenic
GGAATCTTACCTGTGATTCC+TGG 0.367449 7_4:-60509374 Msa1167960:CDS
GTAAGAGAGTTAGAGAGCTT+TGG 0.378000 7_4:+60511204 None:intergenic
TCCAACCCAATTCAATTACT+TGG 0.380360 7_4:-60509794 Msa1167960:CDS
TGAGGATCAGGGGAACAAAA+AGG 0.397284 7_4:+60510860 None:intergenic
TGGTTCAATTATCAATTGTA+TGG 0.399554 7_4:-60510171 Msa1167960:CDS
TTGTATTCAAGAAATCCTTA+TGG 0.412377 7_4:-60509452 Msa1167960:CDS
TTGGAATTGCATTTCAACCT+TGG 0.412888 7_4:-60509607 Msa1167960:CDS
TTTGTTCCCCTGATCCTCAC+TGG 0.419591 7_4:-60510856 Msa1167960:CDS
GTCCTTTGGCTAGGTGTAGT+TGG 0.425237 7_4:+60511021 None:intergenic
AGATTTACAAGAGCATTTGC+AGG 0.428103 7_4:+60509680 None:intergenic
TTAGCATATCTTGTAAAATC+AGG 0.436745 7_4:+60509932 None:intergenic
CTGATCCTCACTGGTCATCC+AGG 0.436907 7_4:-60510847 Msa1167960:intron
TTAAGGGCCTTAGTTGGTTG+TGG 0.442410 7_4:-60510337 Msa1167960:CDS
CTTGGGATGGCTTGGTGGCA+AGG 0.444795 7_4:-60510913 Msa1167960:CDS
TTAGTTGGTTGTGGTTGGTA+TGG 0.445293 7_4:-60510328 Msa1167960:CDS
TTGATCTTGGGATGGCTTGG+TGG 0.445592 7_4:-60510918 Msa1167960:CDS
AAGAAAACTAATTTAAGCAT+TGG 0.446596 7_4:-60509479 Msa1167960:CDS
TTGTTGATCTTGGGATGGCT+TGG 0.450021 7_4:-60510921 Msa1167960:CDS
ACCAAGTAATTGAATTGGGT+TGG 0.450613 7_4:+60509793 None:intergenic
GTGAGAGCTTTGTATATACT+TGG 0.452917 7_4:-60509568 Msa1167960:CDS
ACTAGAATAATTCCTCCAAT+AGG 0.453650 7_4:+60509518 None:intergenic
CAATTACTTGGTAAAATTGG+TGG 0.458315 7_4:-60509782 Msa1167960:CDS
GTTACTGCAGGTACGCGTTA+TGG 0.459237 7_4:-60510424 Msa1167960:intron
AGTTGGCTTAAGATCATCAT+TGG 0.467576 7_4:+60511038 None:intergenic
GTTGGTTATTCTGCATTGAT+GGG 0.467875 7_4:-60509542 Msa1167960:CDS
CTTTGGGTAGGACTTGTTGT+GGG 0.470770 7_4:-60510973 Msa1167960:CDS
GAAGTTAGTAGAATGAGTAT+TGG 0.472811 7_4:+60510106 None:intergenic
TTATTGAATTTGGCAAAAGA+AGG 0.472834 7_4:+60510272 None:intergenic
AAAGATGATCTAGCAAGAAC+CGG 0.476184 7_4:+60510391 None:intergenic
ATACCAACCACAACCAACTA+AGG 0.481785 7_4:+60510330 None:intergenic
ATTGTATGGAAAGGAATTGA+AGG 0.487515 7_4:-60510157 Msa1167960:CDS
TGGTGCTTACTATTACACTA+AGG 0.487683 7_4:-60509432 Msa1167960:CDS
AGCTAGGCTTATACCAAGAA+TGG 0.487853 7_4:+60509739 None:intergenic
GGGCCTTAGTTGGTTGTGGT+TGG 0.491408 7_4:-60510333 Msa1167960:CDS
GATCAAATTATTGGTCAAGC+TGG 0.492344 7_4:-60509899 Msa1167960:CDS
ATTTGCAGGTGCTACAACAT+TGG 0.494946 7_4:+60509694 None:intergenic
GCATTGATGGGTCCTATTGG+AGG 0.498548 7_4:-60509530 Msa1167960:CDS
ATTTAATGTGGCAGCAATTG+TGG 0.499090 7_4:-60509408 Msa1167960:CDS
TGTTGGTTGTAATTGTAGCT+AGG 0.503124 7_4:+60509723 None:intergenic
ATATGACCAAATCAAGAGTA+AGG 0.505850 7_4:+60510084 None:intergenic
ATTTGGTCATATGTTAAAGC+TGG 0.507702 7_4:-60510073 Msa1167960:CDS
TGGTCATATGTTAAAGCTGG+TGG 0.510806 7_4:-60510070 Msa1167960:CDS
CTTATATTAGCAGTTAGAGA+AGG 0.514112 7_4:+60509983 None:intergenic
TAGCCTTGTTGATCTTGGGA+TGG 0.514134 7_4:-60510926 Msa1167960:CDS
TCAAAATCTCTACCTTGGCT+TGG 0.514751 7_4:-60510235 Msa1167960:CDS
TCATTGGTAAGTGTGGGATC+AGG 0.516253 7_4:+60511054 None:intergenic
ACCAACTAAGGCCCTTAAAA+GGG 0.516958 7_4:+60510342 None:intergenic
GTGTAATAGTAAGCACCATA+AGG 0.524596 7_4:+60509437 None:intergenic
CTTCTAAAATTGAACCACAT+TGG 0.525736 7_4:+60509653 None:intergenic
AAACATTATTATGCAAGGCA+TGG 0.527048 7_4:+60511133 None:intergenic
CCTTTGGGTAGGACTTGTTG+TGG 0.527885 7_4:-60510974 Msa1167960:CDS
CAATTATCAATTGTATGGAA+AGG 0.537279 7_4:-60510166 Msa1167960:CDS
AAGATCATCATTGGTAAGTG+TGG 0.537536 7_4:+60511047 None:intergenic
TATTGGAGGAATTATTCTAG+TGG 0.543604 7_4:-60509516 Msa1167960:CDS
CATTGTCAAAATCTCTACCT+TGG 0.548679 7_4:-60510240 Msa1167960:CDS
GGTGCTTACTATTACACTAA+GGG 0.551755 7_4:-60509431 Msa1167960:CDS
GCAATTGTGGCTCTAGTCGT+TGG 0.552932 7_4:-60509395 Msa1167960:CDS
TTGTTGTCTATAATAATGCT+TGG 0.552958 7_4:-60509304 Msa1167960:CDS
TTATATTAGCAGTTAGAGAA+GGG 0.553068 7_4:+60509984 None:intergenic
CTTGACTTAAGAAGCATCCA+AGG 0.555473 7_4:+60509590 None:intergenic
TACAACATTGGCAGCAATGT+TGG 0.556572 7_4:+60509706 None:intergenic
CGATGAAACATTATTATGCA+AGG 0.563277 7_4:+60511128 None:intergenic
TTGTATGGAAAGGAATTGAA+GGG 0.565766 7_4:-60510156 Msa1167960:CDS
CTACCAGCAAGGTAATAAGA+AGG 0.566875 7_4:+60510946 None:intergenic
GGAATTGAAACATGGATTGG+TGG 0.572647 7_4:-60510307 Msa1167960:CDS
AACTAAGGCCCTTAAAAGGG+TGG 0.577930 7_4:+60510345 None:intergenic
AGATCATCATTGGTAAGTGT+GGG 0.578023 7_4:+60511048 None:intergenic
TATGGAATTGAAACATGGAT+TGG 0.583446 7_4:-60510310 Msa1167960:CDS
TGATAATTGAACCACCATGA+AGG 0.589905 7_4:+60510180 None:intergenic
TGGATGACCAGTGAGGATCA+GGG 0.593195 7_4:+60510849 None:intergenic
TTGGTGGCAAGGCATAGCTA+CGG 0.602844 7_4:-60510902 Msa1167960:CDS
GATCAACAAGGCTACCAGCA+AGG 0.609165 7_4:+60510935 None:intergenic
TTACACTAAGGGATTTAATG+TGG 0.614787 7_4:-60509420 Msa1167960:CDS
TACCAGCAAGGTAATAAGAA+GGG 0.615006 7_4:+60510947 None:intergenic
AGTGGGGAAGTGCCAAGCCA+AGG 0.621584 7_4:+60510223 None:intergenic
ACTAAGGCCCTTAAAAGGGT+GGG 0.621679 7_4:+60510346 None:intergenic
TTGTAAATCTTAGTCCAATG+TGG 0.629164 7_4:-60509667 Msa1167960:CDS
GTTGGTATGGAATTGAAACA+TGG 0.642108 7_4:-60510315 Msa1167960:CDS
GAAATGGCTAGCCTTTGGGT+AGG 0.643060 7_4:-60510985 Msa1167960:CDS
GTGGCAAGGCATAGCTACGG+TGG 0.646889 7_4:-60510899 Msa1167960:CDS
GGATGACCAGTGAGGATCAG+GGG 0.653817 7_4:+60510850 None:intergenic
AGCCAACTACACCTAGCCAA+AGG 0.664324 7_4:-60511023 Msa1167960:CDS
TTGCTTCATAGCCTTCATGG+TGG 0.664805 7_4:-60510191 Msa1167960:CDS
GGGTGGGAATGTGAGCACCA+TGG 0.672977 7_4:+60510362 None:intergenic
CCACAACAAGTCCTACCCAA+AGG 0.682442 7_4:+60510974 None:intergenic
AAGCCATCCCAAGATCAACA+AGG 0.710232 7_4:+60510923 None:intergenic
TTATACCTGGATGACCAGTG+AGG 0.765872 7_4:+60510842 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCATCAACAAAAATTATATT+TGG - chr7_4:60510651-60510670 Msa1167960:intron 15.0%
!! TCATCAACAAAAATTATATT+TGG - chr7_4:60510651-60510670 Msa1167960:intron 15.0%
!!! TTGTTTAGTTTTTTTGATGA+TGG + chr7_4:60509307-60509326 None:intergenic 20.0%
!! TAATGAAAACCATATATGTT+TGG + chr7_4:60509968-60509987 None:intergenic 20.0%
!!! TATGGTTTTCATTATATCTT+TGG - chr7_4:60509974-60509993 Msa1167960:CDS 20.0%
!! TACTCATATATAATTTCAAG+TGG + chr7_4:60510004-60510023 None:intergenic 20.0%
!!! GTACTTTGTTTTATTGAATT+TGG + chr7_4:60510219-60510238 None:intergenic 20.0%
!!! TAACTGCTAATATAAGTTTT+TGG - chr7_4:60510502-60510521 Msa1167960:intron 20.0%
!!! AACTGCTAATATAAGTTTTT+GGG - chr7_4:60510503-60510522 Msa1167960:intron 20.0%
!!! TTTTACCAAGTAATTGAATT+GGG + chr7_4:60510692-60510711 None:intergenic 20.0%
!!! ATTTTACCAAGTAATTGAAT+TGG + chr7_4:60510693-60510712 None:intergenic 20.0%
!! ATTCAATTACTTGGTAAAAT+TGG - chr7_4:60510693-60510712 Msa1167960:intron 20.0%
!! AAGAAAACTAATTTAAGCAT+TGG - chr7_4:60510999-60511018 Msa1167960:CDS 20.0%
!!! TTGTTTAGTTTTTTTGATGA+TGG + chr7_4:60509307-60509326 None:intergenic 20.0%
!! TAATGAAAACCATATATGTT+TGG + chr7_4:60509968-60509987 None:intergenic 20.0%
!!! TATGGTTTTCATTATATCTT+TGG - chr7_4:60509974-60509993 Msa1167960:CDS 20.0%
!! TACTCATATATAATTTCAAG+TGG + chr7_4:60510004-60510023 None:intergenic 20.0%
!!! GTACTTTGTTTTATTGAATT+TGG + chr7_4:60510219-60510238 None:intergenic 20.0%
!!! TAACTGCTAATATAAGTTTT+TGG - chr7_4:60510502-60510521 Msa1167960:intron 20.0%
!!! AACTGCTAATATAAGTTTTT+GGG - chr7_4:60510503-60510522 Msa1167960:intron 20.0%
!!! TTTTACCAAGTAATTGAATT+GGG + chr7_4:60510692-60510711 None:intergenic 20.0%
!!! ATTTTACCAAGTAATTGAAT+TGG + chr7_4:60510693-60510712 None:intergenic 20.0%
!! ATTCAATTACTTGGTAAAAT+TGG - chr7_4:60510693-60510712 Msa1167960:intron 20.0%
!! AAGAAAACTAATTTAAGCAT+TGG - chr7_4:60510999-60511018 Msa1167960:CDS 20.0%
! ATTGATGTGAGAGAATTATT+TGG + chr7_4:60509238-60509257 None:intergenic 25.0%
!!! TTTTTTTGATGATGGAAGAA+GGG + chr7_4:60509299-60509318 None:intergenic 25.0%
! TAAACATAGAAGGATATCAT+AGG - chr7_4:60509846-60509865 Msa1167960:CDS 25.0%
! TTATTGAATTTGGCAAAAGA+AGG + chr7_4:60510209-60510228 None:intergenic 25.0%
! TGAAGCAAAAAAATTCTAGT+GGG + chr7_4:60510275-60510294 None:intergenic 25.0%
! ATGAAGCAAAAAAATTCTAG+TGG + chr7_4:60510276-60510295 None:intergenic 25.0%
! TGGTTCAATTATCAATTGTA+TGG - chr7_4:60510307-60510326 Msa1167960:CDS 25.0%
! CAATTATCAATTGTATGGAA+AGG - chr7_4:60510312-60510331 Msa1167960:CDS 25.0%
!! AACTCTCAAATTCAGAATTT+TGG - chr7_4:60510460-60510479 Msa1167960:intron 25.0%
! TTATATTAGCAGTTAGAGAA+GGG + chr7_4:60510497-60510516 None:intergenic 25.0%
! TTAGCATATCTTGTAAAATC+AGG + chr7_4:60510549-60510568 None:intergenic 25.0%
! AGCCAAAATGATCAAATTAT+TGG - chr7_4:60510570-60510589 Msa1167960:intron 25.0%
!! GACCAATAATTTGATCATTT+TGG + chr7_4:60510575-60510594 None:intergenic 25.0%
! TTGTATTCAAGAAATCCTTA+TGG - chr7_4:60511026-60511045 Msa1167960:CDS 25.0%
! TTGTTGTCTATAATAATGCT+TGG - chr7_4:60511174-60511193 Msa1167960:CDS 25.0%
! ATTGATGTGAGAGAATTATT+TGG + chr7_4:60509238-60509257 None:intergenic 25.0%
!!! TTTTTTTGATGATGGAAGAA+GGG + chr7_4:60509299-60509318 None:intergenic 25.0%
! TAAACATAGAAGGATATCAT+AGG - chr7_4:60509846-60509865 Msa1167960:CDS 25.0%
! TTATTGAATTTGGCAAAAGA+AGG + chr7_4:60510209-60510228 None:intergenic 25.0%
! TGAAGCAAAAAAATTCTAGT+GGG + chr7_4:60510275-60510294 None:intergenic 25.0%
! ATGAAGCAAAAAAATTCTAG+TGG + chr7_4:60510276-60510295 None:intergenic 25.0%
! TGGTTCAATTATCAATTGTA+TGG - chr7_4:60510307-60510326 Msa1167960:CDS 25.0%
! CAATTATCAATTGTATGGAA+AGG - chr7_4:60510312-60510331 Msa1167960:CDS 25.0%
!! AACTCTCAAATTCAGAATTT+TGG - chr7_4:60510460-60510479 Msa1167960:intron 25.0%
! TTATATTAGCAGTTAGAGAA+GGG + chr7_4:60510497-60510516 None:intergenic 25.0%
! TTAGCATATCTTGTAAAATC+AGG + chr7_4:60510549-60510568 None:intergenic 25.0%
! AGCCAAAATGATCAAATTAT+TGG - chr7_4:60510570-60510589 Msa1167960:intron 25.0%
!! GACCAATAATTTGATCATTT+TGG + chr7_4:60510575-60510594 None:intergenic 25.0%
! TTGTATTCAAGAAATCCTTA+TGG - chr7_4:60511026-60511045 Msa1167960:CDS 25.0%
! TTGTTGTCTATAATAATGCT+TGG - chr7_4:60511174-60511193 Msa1167960:CDS 25.0%
!!! GTTTTTTTGATGATGGAAGA+AGG + chr7_4:60509300-60509319 None:intergenic 30.0%
AAACATTATTATGCAAGGCA+TGG + chr7_4:60509348-60509367 None:intergenic 30.0%
CGATGAAACATTATTATGCA+AGG + chr7_4:60509353-60509372 None:intergenic 30.0%
AGAAAAAGGGACTATAGAAT+TGG + chr7_4:60509383-60509402 None:intergenic 30.0%
CAAAACCATGTGAAGAAAAA+GGG + chr7_4:60509396-60509415 None:intergenic 30.0%
TCAAAACCATGTGAAGAAAA+AGG + chr7_4:60509397-60509416 None:intergenic 30.0%
TGAGAAAGATCAAAATCAGT+GGG + chr7_4:60509708-60509727 None:intergenic 30.0%
TTGAGAAAGATCAAAATCAG+TGG + chr7_4:60509709-60509728 None:intergenic 30.0%
ATAGATTCCTAACTATGTCT+TGG - chr7_4:60509732-60509751 Msa1167960:CDS 30.0%
TCAAAAACCAAGACATAGTT+AGG + chr7_4:60509742-60509761 None:intergenic 30.0%
! TATGCTATTTGCAAGTTCAA+AGG - chr7_4:60509783-60509802 Msa1167960:CDS 30.0%
CACAAAGTTAAGTGATTAGA+TGG - chr7_4:60509823-60509842 Msa1167960:CDS 30.0%
GATTAGATGGTAAACATAGA+AGG - chr7_4:60509836-60509855 Msa1167960:CDS 30.0%
TATTAGCTGCCAAACATATA+TGG - chr7_4:60509956-60509975 Msa1167960:CDS 30.0%
TCTCGTCAACTTAAAATCTA+TGG - chr7_4:60510027-60510046 Msa1167960:CDS 30.0%
TATGGAATTGAAACATGGAT+TGG - chr7_4:60510168-60510187 Msa1167960:CDS 30.0%
GAAGCAAAAAAATTCTAGTG+GGG + chr7_4:60510274-60510293 None:intergenic 30.0%
ATTGTATGGAAAGGAATTGA+AGG - chr7_4:60510321-60510340 Msa1167960:CDS 30.0%
TTGTATGGAAAGGAATTGAA+GGG - chr7_4:60510322-60510341 Msa1167960:CDS 30.0%
GAAGTTAGTAGAATGAGTAT+TGG + chr7_4:60510375-60510394 None:intergenic 30.0%
TAACTTCCTTACTCTTGATT+TGG - chr7_4:60510388-60510407 Msa1167960:CDS 30.0%
ATATGACCAAATCAAGAGTA+AGG + chr7_4:60510397-60510416 None:intergenic 30.0%
ATTTGGTCATATGTTAAAGC+TGG - chr7_4:60510405-60510424 Msa1167960:CDS 30.0%
TTCTGAATTTGAGAGTTTAG+AGG + chr7_4:60510457-60510476 None:intergenic 30.0%
CTTATATTAGCAGTTAGAGA+AGG + chr7_4:60510498-60510517 None:intergenic 30.0%
CAATTACTTGGTAAAATTGG+TGG - chr7_4:60510696-60510715 Msa1167960:intron 30.0%
TTGTAAATCTTAGTCCAATG+TGG - chr7_4:60510811-60510830 Msa1167960:intron 30.0%
!! CTTCTAAAATTGAACCACAT+TGG + chr7_4:60510828-60510847 None:intergenic 30.0%
!! ATGTGGTTCAATTTTAGAAG+AGG - chr7_4:60510828-60510847 Msa1167960:intron 30.0%
TTTGTATATACTTGGCTAGT+TGG - chr7_4:60510918-60510937 Msa1167960:CDS 30.0%
ACTAGAATAATTCCTCCAAT+AGG + chr7_4:60510963-60510982 None:intergenic 30.0%
TATTGGAGGAATTATTCTAG+TGG - chr7_4:60510962-60510981 Msa1167960:CDS 30.0%
TTACACTAAGGGATTTAATG+TGG - chr7_4:60511058-60511077 Msa1167960:CDS 30.0%
!! TTTCTGCAGCATTGTTTTAT+TGG - chr7_4:60511210-60511229 Msa1167960:CDS 30.0%
!!! GTTTTTTTGATGATGGAAGA+AGG + chr7_4:60509300-60509319 None:intergenic 30.0%
AAACATTATTATGCAAGGCA+TGG + chr7_4:60509348-60509367 None:intergenic 30.0%
CGATGAAACATTATTATGCA+AGG + chr7_4:60509353-60509372 None:intergenic 30.0%
AGAAAAAGGGACTATAGAAT+TGG + chr7_4:60509383-60509402 None:intergenic 30.0%
CAAAACCATGTGAAGAAAAA+GGG + chr7_4:60509396-60509415 None:intergenic 30.0%
TCAAAACCATGTGAAGAAAA+AGG + chr7_4:60509397-60509416 None:intergenic 30.0%
TGAGAAAGATCAAAATCAGT+GGG + chr7_4:60509708-60509727 None:intergenic 30.0%
TTGAGAAAGATCAAAATCAG+TGG + chr7_4:60509709-60509728 None:intergenic 30.0%
ATAGATTCCTAACTATGTCT+TGG - chr7_4:60509732-60509751 Msa1167960:CDS 30.0%
TCAAAAACCAAGACATAGTT+AGG + chr7_4:60509742-60509761 None:intergenic 30.0%
! TATGCTATTTGCAAGTTCAA+AGG - chr7_4:60509783-60509802 Msa1167960:CDS 30.0%
CACAAAGTTAAGTGATTAGA+TGG - chr7_4:60509823-60509842 Msa1167960:CDS 30.0%
GATTAGATGGTAAACATAGA+AGG - chr7_4:60509836-60509855 Msa1167960:CDS 30.0%
TATTAGCTGCCAAACATATA+TGG - chr7_4:60509956-60509975 Msa1167960:CDS 30.0%
TCTCGTCAACTTAAAATCTA+TGG - chr7_4:60510027-60510046 Msa1167960:CDS 30.0%
TATGGAATTGAAACATGGAT+TGG - chr7_4:60510168-60510187 Msa1167960:CDS 30.0%
GAAGCAAAAAAATTCTAGTG+GGG + chr7_4:60510274-60510293 None:intergenic 30.0%
ATTGTATGGAAAGGAATTGA+AGG - chr7_4:60510321-60510340 Msa1167960:CDS 30.0%
TTGTATGGAAAGGAATTGAA+GGG - chr7_4:60510322-60510341 Msa1167960:CDS 30.0%
GAAGTTAGTAGAATGAGTAT+TGG + chr7_4:60510375-60510394 None:intergenic 30.0%
TAACTTCCTTACTCTTGATT+TGG - chr7_4:60510388-60510407 Msa1167960:CDS 30.0%
ATATGACCAAATCAAGAGTA+AGG + chr7_4:60510397-60510416 None:intergenic 30.0%
ATTTGGTCATATGTTAAAGC+TGG - chr7_4:60510405-60510424 Msa1167960:CDS 30.0%
TTCTGAATTTGAGAGTTTAG+AGG + chr7_4:60510457-60510476 None:intergenic 30.0%
CTTATATTAGCAGTTAGAGA+AGG + chr7_4:60510498-60510517 None:intergenic 30.0%
CAATTACTTGGTAAAATTGG+TGG - chr7_4:60510696-60510715 Msa1167960:intron 30.0%
TTGTAAATCTTAGTCCAATG+TGG - chr7_4:60510811-60510830 Msa1167960:intron 30.0%
!! CTTCTAAAATTGAACCACAT+TGG + chr7_4:60510828-60510847 None:intergenic 30.0%
!! ATGTGGTTCAATTTTAGAAG+AGG - chr7_4:60510828-60510847 Msa1167960:intron 30.0%
TTTGTATATACTTGGCTAGT+TGG - chr7_4:60510918-60510937 Msa1167960:CDS 30.0%
ACTAGAATAATTCCTCCAAT+AGG + chr7_4:60510963-60510982 None:intergenic 30.0%
TATTGGAGGAATTATTCTAG+TGG - chr7_4:60510962-60510981 Msa1167960:CDS 30.0%
TTACACTAAGGGATTTAATG+TGG - chr7_4:60511058-60511077 Msa1167960:CDS 30.0%
!! TTTCTGCAGCATTGTTTTAT+TGG - chr7_4:60511210-60511229 Msa1167960:CDS 30.0%
GACATTGAAGTTGAGACATT+TGG + chr7_4:60509203-60509222 None:intergenic 35.0%
! ATAGTCCCTTTTTCTTCACA+TGG - chr7_4:60509388-60509407 Msa1167960:CDS 35.0%
AGATCATCATTGGTAAGTGT+GGG + chr7_4:60509433-60509452 None:intergenic 35.0%
AAGATCATCATTGGTAAGTG+TGG + chr7_4:60509434-60509453 None:intergenic 35.0%
! AGTTGGCTTAAGATCATCAT+TGG + chr7_4:60509443-60509462 None:intergenic 35.0%
TACCAGCAAGGTAATAAGAA+GGG + chr7_4:60509534-60509553 None:intergenic 35.0%
GGGAACAAAAAGGATAATGT+TGG + chr7_4:60509611-60509630 None:intergenic 35.0%
AAAGATGATCTAGCAAGAAC+CGG + chr7_4:60510090-60510109 None:intergenic 35.0%
! GTTCTTGCTAGATCATCTTT+TGG - chr7_4:60510090-60510109 Msa1167960:CDS 35.0%
!!! AGATCATCTTTTGGAATCCA+TGG - chr7_4:60510099-60510118 Msa1167960:CDS 35.0%
GTTGGTATGGAATTGAAACA+TGG - chr7_4:60510163-60510182 Msa1167960:CDS 35.0%
CATTGTCAAAATCTCTACCT+TGG - chr7_4:60510238-60510257 Msa1167960:CDS 35.0%
! TTTTTGCTTCATAGCCTTCA+TGG - chr7_4:60510284-60510303 Msa1167960:CDS 35.0%
TGATAATTGAACCACCATGA+AGG + chr7_4:60510301-60510320 None:intergenic 35.0%
!! TATGTTAAAGCTGGTGGATT+TGG - chr7_4:60510414-60510433 Msa1167960:CDS 35.0%
GATCAAATTATTGGTCAAGC+TGG - chr7_4:60510579-60510598 Msa1167960:intron 35.0%
!!! AGCTGGTCTTCCTATTTTTA+TGG - chr7_4:60510596-60510615 Msa1167960:intron 35.0%
!!! GCTGGTCTTCCTATTTTTAT+GGG - chr7_4:60510597-60510616 Msa1167960:intron 35.0%
GTGAATGCACCCATAAAAAT+AGG + chr7_4:60510609-60510628 None:intergenic 35.0%
TCCAACCCAATTCAATTACT+TGG - chr7_4:60510684-60510703 Msa1167960:intron 35.0%
ACCAAGTAATTGAATTGGGT+TGG + chr7_4:60510688-60510707 None:intergenic 35.0%
ACTACAATCTTAGCCATTCT+TGG - chr7_4:60510726-60510745 Msa1167960:intron 35.0%
! TGTTGGTTGTAATTGTAGCT+AGG + chr7_4:60510758-60510777 None:intergenic 35.0%
!! AGATTTACAAGAGCATTTGC+AGG + chr7_4:60510801-60510820 None:intergenic 35.0%
GCTATACTAACAGCATTTCT+TGG - chr7_4:60510852-60510871 Msa1167960:CDS 35.0%
TTGGAATTGCATTTCAACCT+TGG - chr7_4:60510871-60510890 Msa1167960:CDS 35.0%
! GTGAGAGCTTTGTATATACT+TGG - chr7_4:60510910-60510929 Msa1167960:CDS 35.0%
AGTTGGTTATTCTGCATTGA+TGG - chr7_4:60510935-60510954 Msa1167960:CDS 35.0%
! GTTGGTTATTCTGCATTGAT+GGG - chr7_4:60510936-60510955 Msa1167960:CDS 35.0%
GTGTAATAGTAAGCACCATA+AGG + chr7_4:60511044-60511063 None:intergenic 35.0%
TGGTGCTTACTATTACACTA+AGG - chr7_4:60511046-60511065 Msa1167960:CDS 35.0%
GGTGCTTACTATTACACTAA+GGG - chr7_4:60511047-60511066 Msa1167960:CDS 35.0%
ATTTAATGTGGCAGCAATTG+TGG - chr7_4:60511070-60511089 Msa1167960:CDS 35.0%
CCAACTTTATGCAAAAAACC+AGG + chr7_4:60511125-60511144 None:intergenic 35.0%
!!! CCTGGTTTTTTGCATAAAGT+TGG - chr7_4:60511122-60511141 Msa1167960:CDS 35.0%
GTCGAGTTTGAGAAAGAAAT+TGG - chr7_4:60511238-60511257 Msa1167960:CDS 35.0%
GACATTGAAGTTGAGACATT+TGG + chr7_4:60509203-60509222 None:intergenic 35.0%
! ATAGTCCCTTTTTCTTCACA+TGG - chr7_4:60509388-60509407 Msa1167960:CDS 35.0%
AGATCATCATTGGTAAGTGT+GGG + chr7_4:60509433-60509452 None:intergenic 35.0%
AAGATCATCATTGGTAAGTG+TGG + chr7_4:60509434-60509453 None:intergenic 35.0%
! AGTTGGCTTAAGATCATCAT+TGG + chr7_4:60509443-60509462 None:intergenic 35.0%
TACCAGCAAGGTAATAAGAA+GGG + chr7_4:60509534-60509553 None:intergenic 35.0%
GGGAACAAAAAGGATAATGT+TGG + chr7_4:60509611-60509630 None:intergenic 35.0%
AAAGATGATCTAGCAAGAAC+CGG + chr7_4:60510090-60510109 None:intergenic 35.0%
! GTTCTTGCTAGATCATCTTT+TGG - chr7_4:60510090-60510109 Msa1167960:CDS 35.0%
!!! AGATCATCTTTTGGAATCCA+TGG - chr7_4:60510099-60510118 Msa1167960:CDS 35.0%
GTTGGTATGGAATTGAAACA+TGG - chr7_4:60510163-60510182 Msa1167960:CDS 35.0%
CATTGTCAAAATCTCTACCT+TGG - chr7_4:60510238-60510257 Msa1167960:CDS 35.0%
! TTTTTGCTTCATAGCCTTCA+TGG - chr7_4:60510284-60510303 Msa1167960:CDS 35.0%
TGATAATTGAACCACCATGA+AGG + chr7_4:60510301-60510320 None:intergenic 35.0%
!! TATGTTAAAGCTGGTGGATT+TGG - chr7_4:60510414-60510433 Msa1167960:CDS 35.0%
GATCAAATTATTGGTCAAGC+TGG - chr7_4:60510579-60510598 Msa1167960:intron 35.0%
!!! AGCTGGTCTTCCTATTTTTA+TGG - chr7_4:60510596-60510615 Msa1167960:intron 35.0%
!!! GCTGGTCTTCCTATTTTTAT+GGG - chr7_4:60510597-60510616 Msa1167960:intron 35.0%
GTGAATGCACCCATAAAAAT+AGG + chr7_4:60510609-60510628 None:intergenic 35.0%
TCCAACCCAATTCAATTACT+TGG - chr7_4:60510684-60510703 Msa1167960:intron 35.0%
ACCAAGTAATTGAATTGGGT+TGG + chr7_4:60510688-60510707 None:intergenic 35.0%
ACTACAATCTTAGCCATTCT+TGG - chr7_4:60510726-60510745 Msa1167960:intron 35.0%
! TGTTGGTTGTAATTGTAGCT+AGG + chr7_4:60510758-60510777 None:intergenic 35.0%
!! AGATTTACAAGAGCATTTGC+AGG + chr7_4:60510801-60510820 None:intergenic 35.0%
GCTATACTAACAGCATTTCT+TGG - chr7_4:60510852-60510871 Msa1167960:CDS 35.0%
TTGGAATTGCATTTCAACCT+TGG - chr7_4:60510871-60510890 Msa1167960:CDS 35.0%
! GTGAGAGCTTTGTATATACT+TGG - chr7_4:60510910-60510929 Msa1167960:CDS 35.0%
AGTTGGTTATTCTGCATTGA+TGG - chr7_4:60510935-60510954 Msa1167960:CDS 35.0%
! GTTGGTTATTCTGCATTGAT+GGG - chr7_4:60510936-60510955 Msa1167960:CDS 35.0%
GTGTAATAGTAAGCACCATA+AGG + chr7_4:60511044-60511063 None:intergenic 35.0%
TGGTGCTTACTATTACACTA+AGG - chr7_4:60511046-60511065 Msa1167960:CDS 35.0%
GGTGCTTACTATTACACTAA+GGG - chr7_4:60511047-60511066 Msa1167960:CDS 35.0%
ATTTAATGTGGCAGCAATTG+TGG - chr7_4:60511070-60511089 Msa1167960:CDS 35.0%
CCAACTTTATGCAAAAAACC+AGG + chr7_4:60511125-60511144 None:intergenic 35.0%
!!! CCTGGTTTTTTGCATAAAGT+TGG - chr7_4:60511122-60511141 Msa1167960:CDS 35.0%
GTCGAGTTTGAGAAAGAAAT+TGG - chr7_4:60511238-60511257 Msa1167960:CDS 35.0%
GTAAGAGAGTTAGAGAGCTT+TGG + chr7_4:60509277-60509296 None:intergenic 40.0%
!! CTAGCCAAAGGACTTTTTCT+GGG - chr7_4:60509467-60509486 Msa1167960:CDS 40.0%
!! GACTTTTTCTGGGTTGGAAA+TGG - chr7_4:60509477-60509496 Msa1167960:CDS 40.0%
CTACCAGCAAGGTAATAAGA+AGG + chr7_4:60509535-60509554 None:intergenic 40.0%
ACTGGTCATCCAGGTATAAA+GGG - chr7_4:60509640-60509659 Msa1167960:CDS 40.0%
TTGATCCATCCCTTTATACC+TGG + chr7_4:60509652-60509671 None:intergenic 40.0%
GCGTTATGGCATATCATTTC+CGG - chr7_4:60510068-60510087 Msa1167960:CDS 40.0%
! TCACATTCCCACCCTTTTAA+GGG - chr7_4:60510125-60510144 Msa1167960:CDS 40.0%
ACCAACTAAGGCCCTTAAAA+GGG + chr7_4:60510139-60510158 None:intergenic 40.0%
AACCAACTAAGGCCCTTAAA+AGG + chr7_4:60510140-60510159 None:intergenic 40.0%
ATACCAACCACAACCAACTA+AGG + chr7_4:60510151-60510170 None:intergenic 40.0%
! TTAGTTGGTTGTGGTTGGTA+TGG - chr7_4:60510150-60510169 Msa1167960:CDS 40.0%
!! GGAATTGAAACATGGATTGG+TGG - chr7_4:60510171-60510190 Msa1167960:CDS 40.0%
TCAAAATCTCTACCTTGGCT+TGG - chr7_4:60510243-60510262 Msa1167960:CDS 40.0%
TGGTCATATGTTAAAGCTGG+TGG - chr7_4:60510408-60510427 Msa1167960:CDS 40.0%
ATGGGTGCATTCACATTTGT+TGG - chr7_4:60510615-60510634 Msa1167960:intron 40.0%
AGCTAGGCTTATACCAAGAA+TGG + chr7_4:60510742-60510761 None:intergenic 40.0%
TACAACATTGGCAGCAATGT+TGG + chr7_4:60510775-60510794 None:intergenic 40.0%
! ATTTGCAGGTGCTACAACAT+TGG + chr7_4:60510787-60510806 None:intergenic 40.0%
!! CTTGACTTAAGAAGCATCCA+AGG + chr7_4:60510891-60510910 None:intergenic 40.0%
TGCAAAAAACCAGGAATCAC+AGG + chr7_4:60511116-60511135 None:intergenic 40.0%
GTAAGAGAGTTAGAGAGCTT+TGG + chr7_4:60509277-60509296 None:intergenic 40.0%
!! CTAGCCAAAGGACTTTTTCT+GGG - chr7_4:60509467-60509486 Msa1167960:CDS 40.0%
!! GACTTTTTCTGGGTTGGAAA+TGG - chr7_4:60509477-60509496 Msa1167960:CDS 40.0%
CTACCAGCAAGGTAATAAGA+AGG + chr7_4:60509535-60509554 None:intergenic 40.0%
ACTGGTCATCCAGGTATAAA+GGG - chr7_4:60509640-60509659 Msa1167960:CDS 40.0%
TTGATCCATCCCTTTATACC+TGG + chr7_4:60509652-60509671 None:intergenic 40.0%
GCGTTATGGCATATCATTTC+CGG - chr7_4:60510068-60510087 Msa1167960:CDS 40.0%
! TCACATTCCCACCCTTTTAA+GGG - chr7_4:60510125-60510144 Msa1167960:CDS 40.0%
ACCAACTAAGGCCCTTAAAA+GGG + chr7_4:60510139-60510158 None:intergenic 40.0%
AACCAACTAAGGCCCTTAAA+AGG + chr7_4:60510140-60510159 None:intergenic 40.0%
ATACCAACCACAACCAACTA+AGG + chr7_4:60510151-60510170 None:intergenic 40.0%
! TTAGTTGGTTGTGGTTGGTA+TGG - chr7_4:60510150-60510169 Msa1167960:CDS 40.0%
!! GGAATTGAAACATGGATTGG+TGG - chr7_4:60510171-60510190 Msa1167960:CDS 40.0%
TCAAAATCTCTACCTTGGCT+TGG - chr7_4:60510243-60510262 Msa1167960:CDS 40.0%
TGGTCATATGTTAAAGCTGG+TGG - chr7_4:60510408-60510427 Msa1167960:CDS 40.0%
ATGGGTGCATTCACATTTGT+TGG - chr7_4:60510615-60510634 Msa1167960:intron 40.0%
AGCTAGGCTTATACCAAGAA+TGG + chr7_4:60510742-60510761 None:intergenic 40.0%
TACAACATTGGCAGCAATGT+TGG + chr7_4:60510775-60510794 None:intergenic 40.0%
! ATTTGCAGGTGCTACAACAT+TGG + chr7_4:60510787-60510806 None:intergenic 40.0%
!! CTTGACTTAAGAAGCATCCA+AGG + chr7_4:60510891-60510910 None:intergenic 40.0%
TGCAAAAAACCAGGAATCAC+AGG + chr7_4:60511116-60511135 None:intergenic 40.0%
TCATTGGTAAGTGTGGGATC+AGG + chr7_4:60509427-60509446 None:intergenic 45.0%
CCAGAAAAAGTCCTTTGGCT+AGG + chr7_4:60509469-60509488 None:intergenic 45.0%
!! CCTAGCCAAAGGACTTTTTC+TGG - chr7_4:60509466-60509485 Msa1167960:CDS 45.0%
CCAACCCAGAAAAAGTCCTT+TGG + chr7_4:60509474-60509493 None:intergenic 45.0%
!! CCAAAGGACTTTTTCTGGGT+TGG - chr7_4:60509471-60509490 Msa1167960:CDS 45.0%
!! GTTGGAAATGGCTAGCCTTT+GGG - chr7_4:60509489-60509508 Msa1167960:CDS 45.0%
!! CTTTGGGTAGGACTTGTTGT+GGG - chr7_4:60509505-60509524 Msa1167960:CDS 45.0%
GTCCCTTCTTATTACCTTGC+TGG - chr7_4:60509529-60509548 Msa1167960:CDS 45.0%
!! CTGGTAGCCTTGTTGATCTT+GGG - chr7_4:60509548-60509567 Msa1167960:CDS 45.0%
!! TAGCCTTGTTGATCTTGGGA+TGG - chr7_4:60509552-60509571 Msa1167960:CDS 45.0%
AAGCCATCCCAAGATCAACA+AGG + chr7_4:60509558-60509577 None:intergenic 45.0%
TTGTTGATCTTGGGATGGCT+TGG - chr7_4:60509557-60509576 Msa1167960:CDS 45.0%
TGAGGATCAGGGGAACAAAA+AGG + chr7_4:60509621-60509640 None:intergenic 45.0%
TTATACCTGGATGACCAGTG+AGG + chr7_4:60509639-60509658 None:intergenic 45.0%
CACTGGTCATCCAGGTATAA+AGG - chr7_4:60509639-60509658 Msa1167960:CDS 45.0%
GTCATCCAGGTATAAAGGGA+TGG - chr7_4:60509644-60509663 Msa1167960:CDS 45.0%
ATCTATGGATCCGTTACTGC+AGG - chr7_4:60510042-60510061 Msa1167960:CDS 45.0%
ATAACGCGTACCTGCAGTAA+CGG + chr7_4:60510055-60510074 None:intergenic 45.0%
! CTCACATTCCCACCCTTTTA+AGG - chr7_4:60510124-60510143 Msa1167960:CDS 45.0%
ACTAAGGCCCTTAAAAGGGT+GGG + chr7_4:60510135-60510154 None:intergenic 45.0%
AACTAAGGCCCTTAAAAGGG+TGG + chr7_4:60510136-60510155 None:intergenic 45.0%
!! ACCCTTTTAAGGGCCTTAGT+TGG - chr7_4:60510135-60510154 Msa1167960:CDS 45.0%
TTAAGGGCCTTAGTTGGTTG+TGG - chr7_4:60510141-60510160 Msa1167960:CDS 45.0%
TTGCTTCATAGCCTTCATGG+TGG - chr7_4:60510287-60510306 Msa1167960:CDS 45.0%
! TCTGCATTGATGGGTCCTAT+TGG - chr7_4:60510945-60510964 Msa1167960:CDS 45.0%
GGAATCTTACCTGTGATTCC+TGG - chr7_4:60511104-60511123 Msa1167960:CDS 45.0%
TCATTGGTAAGTGTGGGATC+AGG + chr7_4:60509427-60509446 None:intergenic 45.0%
CCAGAAAAAGTCCTTTGGCT+AGG + chr7_4:60509469-60509488 None:intergenic 45.0%
!! CCTAGCCAAAGGACTTTTTC+TGG - chr7_4:60509466-60509485 Msa1167960:CDS 45.0%
CCAACCCAGAAAAAGTCCTT+TGG + chr7_4:60509474-60509493 None:intergenic 45.0%
!! CCAAAGGACTTTTTCTGGGT+TGG - chr7_4:60509471-60509490 Msa1167960:CDS 45.0%
!! GTTGGAAATGGCTAGCCTTT+GGG - chr7_4:60509489-60509508 Msa1167960:CDS 45.0%
!! CTTTGGGTAGGACTTGTTGT+GGG - chr7_4:60509505-60509524 Msa1167960:CDS 45.0%
GTCCCTTCTTATTACCTTGC+TGG - chr7_4:60509529-60509548 Msa1167960:CDS 45.0%
!! CTGGTAGCCTTGTTGATCTT+GGG - chr7_4:60509548-60509567 Msa1167960:CDS 45.0%
!! TAGCCTTGTTGATCTTGGGA+TGG - chr7_4:60509552-60509571 Msa1167960:CDS 45.0%
AAGCCATCCCAAGATCAACA+AGG + chr7_4:60509558-60509577 None:intergenic 45.0%
TTGTTGATCTTGGGATGGCT+TGG - chr7_4:60509557-60509576 Msa1167960:CDS 45.0%
TGAGGATCAGGGGAACAAAA+AGG + chr7_4:60509621-60509640 None:intergenic 45.0%
TTATACCTGGATGACCAGTG+AGG + chr7_4:60509639-60509658 None:intergenic 45.0%
CACTGGTCATCCAGGTATAA+AGG - chr7_4:60509639-60509658 Msa1167960:CDS 45.0%
GTCATCCAGGTATAAAGGGA+TGG - chr7_4:60509644-60509663 Msa1167960:CDS 45.0%
ATCTATGGATCCGTTACTGC+AGG - chr7_4:60510042-60510061 Msa1167960:CDS 45.0%
ATAACGCGTACCTGCAGTAA+CGG + chr7_4:60510055-60510074 None:intergenic 45.0%
! CTCACATTCCCACCCTTTTA+AGG - chr7_4:60510124-60510143 Msa1167960:CDS 45.0%
ACTAAGGCCCTTAAAAGGGT+GGG + chr7_4:60510135-60510154 None:intergenic 45.0%
AACTAAGGCCCTTAAAAGGG+TGG + chr7_4:60510136-60510155 None:intergenic 45.0%
!! ACCCTTTTAAGGGCCTTAGT+TGG - chr7_4:60510135-60510154 Msa1167960:CDS 45.0%
TTAAGGGCCTTAGTTGGTTG+TGG - chr7_4:60510141-60510160 Msa1167960:CDS 45.0%
TTGCTTCATAGCCTTCATGG+TGG - chr7_4:60510287-60510306 Msa1167960:CDS 45.0%
! TCTGCATTGATGGGTCCTAT+TGG - chr7_4:60510945-60510964 Msa1167960:CDS 45.0%
GGAATCTTACCTGTGATTCC+TGG - chr7_4:60511104-60511123 Msa1167960:CDS 45.0%
!!! GGCATGGTTTTGTGCATGGA+AGG + chr7_4:60509332-60509351 None:intergenic 50.0%
!!! GCAAGGCATGGTTTTGTGCA+TGG + chr7_4:60509336-60509355 None:intergenic 50.0%
AGCCAACTACACCTAGCCAA+AGG - chr7_4:60509455-60509474 Msa1167960:CDS 50.0%
GTCCTTTGGCTAGGTGTAGT+TGG + chr7_4:60509460-60509479 None:intergenic 50.0%
!! GGTTGGAAATGGCTAGCCTT+TGG - chr7_4:60509488-60509507 Msa1167960:CDS 50.0%
!! GAAATGGCTAGCCTTTGGGT+AGG - chr7_4:60509493-60509512 Msa1167960:CDS 50.0%
CCACAACAAGTCCTACCCAA+AGG + chr7_4:60509507-60509526 None:intergenic 50.0%
!! CCTTTGGGTAGGACTTGTTG+TGG - chr7_4:60509504-60509523 Msa1167960:CDS 50.0%
GATCAACAAGGCTACCAGCA+AGG + chr7_4:60509546-60509565 None:intergenic 50.0%
!! GCTGGTAGCCTTGTTGATCT+TGG - chr7_4:60509547-60509566 Msa1167960:CDS 50.0%
! TTGATCTTGGGATGGCTTGG+TGG - chr7_4:60509560-60509579 Msa1167960:CDS 50.0%
! TTGGTGGCAAGGCATAGCTA+CGG - chr7_4:60509576-60509595 Msa1167960:CDS 50.0%
TTTGTTCCCCTGATCCTCAC+TGG - chr7_4:60509622-60509641 Msa1167960:CDS 50.0%
TGGATGACCAGTGAGGATCA+GGG + chr7_4:60509632-60509651 None:intergenic 50.0%
GTTACTGCAGGTACGCGTTA+TGG - chr7_4:60510054-60510073 Msa1167960:CDS 50.0%
! GCATTGATGGGTCCTATTGG+AGG - chr7_4:60510948-60510967 Msa1167960:CDS 50.0%
!! GCAATTGTGGCTCTAGTCGT+TGG - chr7_4:60511083-60511102 Msa1167960:CDS 50.0%
!!! GGCATGGTTTTGTGCATGGA+AGG + chr7_4:60509332-60509351 None:intergenic 50.0%
!!! GCAAGGCATGGTTTTGTGCA+TGG + chr7_4:60509336-60509355 None:intergenic 50.0%
AGCCAACTACACCTAGCCAA+AGG - chr7_4:60509455-60509474 Msa1167960:CDS 50.0%
GTCCTTTGGCTAGGTGTAGT+TGG + chr7_4:60509460-60509479 None:intergenic 50.0%
!! GGTTGGAAATGGCTAGCCTT+TGG - chr7_4:60509488-60509507 Msa1167960:CDS 50.0%
!! GAAATGGCTAGCCTTTGGGT+AGG - chr7_4:60509493-60509512 Msa1167960:CDS 50.0%
CCACAACAAGTCCTACCCAA+AGG + chr7_4:60509507-60509526 None:intergenic 50.0%
!! CCTTTGGGTAGGACTTGTTG+TGG - chr7_4:60509504-60509523 Msa1167960:CDS 50.0%
GATCAACAAGGCTACCAGCA+AGG + chr7_4:60509546-60509565 None:intergenic 50.0%
!! GCTGGTAGCCTTGTTGATCT+TGG - chr7_4:60509547-60509566 Msa1167960:CDS 50.0%
! TTGATCTTGGGATGGCTTGG+TGG - chr7_4:60509560-60509579 Msa1167960:CDS 50.0%
! TTGGTGGCAAGGCATAGCTA+CGG - chr7_4:60509576-60509595 Msa1167960:CDS 50.0%
TTTGTTCCCCTGATCCTCAC+TGG - chr7_4:60509622-60509641 Msa1167960:CDS 50.0%
TGGATGACCAGTGAGGATCA+GGG + chr7_4:60509632-60509651 None:intergenic 50.0%
GTTACTGCAGGTACGCGTTA+TGG - chr7_4:60510054-60510073 Msa1167960:CDS 50.0%
! GCATTGATGGGTCCTATTGG+AGG - chr7_4:60510948-60510967 Msa1167960:CDS 50.0%
!! GCAATTGTGGCTCTAGTCGT+TGG - chr7_4:60511083-60511102 Msa1167960:CDS 50.0%
GGATGACCAGTGAGGATCAG+GGG + chr7_4:60509631-60509650 None:intergenic 55.0%
CTGGATGACCAGTGAGGATC+AGG + chr7_4:60509633-60509652 None:intergenic 55.0%
CTGATCCTCACTGGTCATCC+AGG - chr7_4:60509631-60509650 Msa1167960:CDS 55.0%
GGGCCTTAGTTGGTTGTGGT+TGG - chr7_4:60510145-60510164 Msa1167960:CDS 55.0%
GGATGACCAGTGAGGATCAG+GGG + chr7_4:60509631-60509650 None:intergenic 55.0%
CTGGATGACCAGTGAGGATC+AGG + chr7_4:60509633-60509652 None:intergenic 55.0%
CTGATCCTCACTGGTCATCC+AGG - chr7_4:60509631-60509650 Msa1167960:CDS 55.0%
GGGCCTTAGTTGGTTGTGGT+TGG - chr7_4:60510145-60510164 Msa1167960:CDS 55.0%
!! CTTGGGATGGCTTGGTGGCA+AGG - chr7_4:60509565-60509584 Msa1167960:CDS 60.0%
GTGGCAAGGCATAGCTACGG+TGG - chr7_4:60509579-60509598 Msa1167960:CDS 60.0%
GGGTGGGAATGTGAGCACCA+TGG + chr7_4:60510119-60510138 None:intergenic 60.0%
!! AGTGGGGAAGTGCCAAGCCA+AGG + chr7_4:60510258-60510277 None:intergenic 60.0%
!! CTTGGGATGGCTTGGTGGCA+AGG - chr7_4:60509565-60509584 Msa1167960:CDS 60.0%
GTGGCAAGGCATAGCTACGG+TGG - chr7_4:60509579-60509598 Msa1167960:CDS 60.0%
GGGTGGGAATGTGAGCACCA+TGG + chr7_4:60510119-60510138 None:intergenic 60.0%
!! AGTGGGGAAGTGCCAAGCCA+AGG + chr7_4:60510258-60510277 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 60509193 60511307 60509193 ID=Msa1167960;Name=Msa1167960
chr7_4 mRNA 60509193 60511307 60509193 ID=Msa1167960-mRNA-1;Parent=Msa1167960;Name=Msa1167960-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|1|0|1|1|1|2|0|567
chr7_4 exon 60510848 60511307 60510848 ID=Msa1167960-mRNA-1:exon:18951;Parent=Msa1167960-mRNA-1
chr7_4 exon 60509193 60510436 60509193 ID=Msa1167960-mRNA-1:exon:18950;Parent=Msa1167960-mRNA-1
chr7_4 CDS 60510848 60511307 60510848 ID=Msa1167960-mRNA-1:cds;Parent=Msa1167960-mRNA-1
chr7_4 CDS 60509193 60510436 60509193 ID=Msa1167960-mRNA-1:cds;Parent=Msa1167960-mRNA-1
Gene Sequence

>Msa1167960

ATGGTATCCAAATGTCTCAACTTCAATGTCTCTTCTTCTCATCCAAATAATTCTCTCACATCAATTTCAAATTCAAAATATCCAAAGCTCTCTAACTCTCTTACCCTTCTTCCATCATCAAAAAAACTAAACAAGACCTTCCATGCACAAAACCATGCCTTGCATAATAATGTTTCATCGAGATACTCCAATTCTATAGTCCCTTTTTCTTCACATGGTTTTGAAATAGAGCCTGATCCCACACTTACCAATGATGATCTTAAGCCAACTACACCTAGCCAAAGGACTTTTTCTGGGTTGGAAATGGCTAGCCTTTGGGTAGGACTTGTTGTGGGAGTCCCTTCTTATTACCTTGCTGGTAGCCTTGTTGATCTTGGGATGGCTTGGTGGCAAGGCATAGCTACGGTGGTTGCAGCCAACATTATCCTTTTTGTTCCCCTGATCCTCACTGGTCATCCAGGTACGCGTTATGGCATATCATTTCCGGTTCTTGCTAGATCATCTTTTGGAATCCATGGTGCTCACATTCCCACCCTTTTAAGGGCCTTAGTTGGTTGTGGTTGGTATGGAATTGAAACATGGATTGGTGGAGAGACAATTTTCCTTCTTTTGCCAAATTCAATAAAACAAAGTACATTGTCAAAATCTCTACCTTGGCTTGGCACTTCCCCACTAGAATTTTTTTGCTTCATAGCCTTCATGGTGGTTCAATTATCAATTGTATGGAAAGGAATTGAAGGGATTAGAGAGCTTGAGAAGTACTCAGCTCCAATACTCATTCTACTAACTTCCTTACTCTTGATTTGGTCATATGTTAAAGCTGGTGGATTTGGTCACATGCTCTCTTTATCCTCTAAACTCTCAAATTCAGAATTTTGGTCTTTATTCTTCCCTTCTCTAACTGCTAATATAAGTTTTTGGGCTGCTCTAGCTCTTAACATACCTGATTTTACAAGATATGCTAAGAGCCAAAATGATCAAATTATTGGTCAAGCTGGTCTTCCTATTTTTATGGGTGCATTCACATTTGTTGGTATAGTAGTAACATCATCAACAAAAATTATATTTGGTCATGTTATTTCCAACCCAATTCAATTACTTGGTAAAATTGGTGGATTTGTAACTACAATCTTAGCCATTCTTGGTATAAGCCTAGCTACAATTACAACCAACATTGCTGCCAATGTTGTAGCACCTGCAAATGCTCTTGTAAATCTTAGTCCAATGTGGTTCAATTTTAGAAGAGGAGCTATACTAACAGCATTTCTTGGAATTGCATTTCAACCTTGGATGCTTCTTAAGTCAAGTGAGAGCTTTGTATATACTTGGCTAGTTGGTTATTCTGCATTGATGGGTCCTATTGGAGGAATTATTCTAGTGGATTATTATCTTGTGAAGAAAACTAATTTAAGCATTGGAGATTTGTATTCAAGAAATCCTTATGGTGCTTACTATTACACTAAGGGATTTAATGTGGCAGCAATTGTGGCTCTAGTCGTTGGAATCTTACCTGTGATTCCTGGTTTTTTGCATAAAGTTGGAATGTTACAATCAGTTTCAGAAACTTTTGTTGTTGTCTATAATAATGCTTGGTTTGTTAGCTTCTTTTCTGCAGCATTGTTTTATTGGATTCTGTCGAGTTTGAGAAAGAAATTGGATGAATCTGCTGCTGCTAGAGACAATTCTTTACATTCTCCCCAGTAA

Protein sequence

>Msa1167960

MVSKCLNFNVSSSHPNNSLTSISNSKYPKLSNSLTLLPSSKKLNKTFHAQNHALHNNVSSRYSNSIVPFSSHGFEIEPDPTLTNDDLKPTTPSQRTFSGLEMASLWVGLVVGVPSYYLAGSLVDLGMAWWQGIATVVAANIILFVPLILTGHPGTRYGISFPVLARSSFGIHGAHIPTLLRALVGCGWYGIETWIGGETIFLLLPNSIKQSTLSKSLPWLGTSPLEFFCFIAFMVVQLSIVWKGIEGIRELEKYSAPILILLTSLLLIWSYVKAGGFGHMLSLSSKLSNSEFWSLFFPSLTANISFWAALALNIPDFTRYAKSQNDQIIGQAGLPIFMGAFTFVGIVVTSSTKIIFGHVISNPIQLLGKIGGFVTTILAILGISLATITTNIAANVVAPANALVNLSPMWFNFRRGAILTAFLGIAFQPWMLLKSSESFVYTWLVGYSALMGPIGGIILVDYYLVKKTNLSIGDLYSRNPYGAYYYTKGFNVAAIVALVVGILPVIPGFLHKVGMLQSVSETFVVVYNNAWFVSFFSAALFYWILSSLRKKLDESAAARDNSLHSPQ*