Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622880 | XP_003597041.1 | 94.298 | 228 | 13 | 0 | 1 | 228 | 1 | 228 | 8.16e-145 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622880 | sp|O82081|UCC1_ARATH | 48.507 | 134 | 65 | 4 | 1 | 131 | 1 | 133 | 2.33e-41 | 144 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027860 | Msa0622880 | 0.804298 | 2.310684e-49 | -8.615850e-47 |
| Msa0616010 | Msa0622880 | 0.803273 | 3.772218e-49 | -8.615850e-47 |
| Msa0616300 | Msa0622880 | 0.802097 | 6.593269e-49 | -8.615850e-47 |
| Msa0620340 | Msa0622880 | 0.801607 | 8.312359e-49 | -8.615850e-47 |
| Msa0622880 | Msa0631700 | 0.809615 | 1.733504e-50 | -8.615850e-47 |
| Msa0622880 | Msa0643190 | 0.834782 | 2.455487e-56 | -8.615850e-47 |
| Msa0622880 | Msa0643840 | 0.806278 | 8.889507e-50 | -8.615850e-47 |
| Msa0622880 | Msa0678620 | 0.814838 | 1.256510e-51 | -8.615850e-47 |
| Msa0622880 | Msa0768670 | 0.814434 | 1.544144e-51 | -8.615850e-47 |
| Msa0622880 | Msa0768720 | 0.802566 | 5.279157e-49 | -8.615850e-47 |
| Msa0622880 | Msa0777250 | 0.822693 | 2.066125e-53 | -8.615850e-47 |
| Msa0622880 | Msa0777260 | 0.810873 | 9.282437e-51 | -8.615850e-47 |
| Msa0622880 | Msa0814230 | 0.847773 | 9.354539e-60 | -8.615850e-47 |
| Msa0622880 | Msa0890210 | 0.804685 | 1.918882e-49 | -8.615850e-47 |
| Msa0622880 | Msa0896920 | 0.812885 | 3.384289e-51 | -8.615850e-47 |
| Msa0622880 | Msa0913550 | 0.843338 | 1.490117e-58 | -8.615850e-47 |
| Msa0622880 | Msa0946310 | 0.812556 | 3.995843e-51 | -8.615850e-47 |
| Msa0622880 | Msa0951150 | 0.840341 | 9.216048e-58 | -8.615850e-47 |
| Msa0622880 | Msa0987640 | 0.849817 | 2.535299e-60 | -8.615850e-47 |
| Msa0622880 | Msa1015560 | 0.800719 | 1.262989e-48 | -8.615850e-47 |
| Msa0622880 | Msa1021620 | 0.808926 | 2.436454e-50 | -8.615850e-47 |
| Msa0622880 | Msa1022510 | 0.806867 | 6.676776e-50 | -8.615850e-47 |
| Msa0622880 | Msa1061670 | 0.832084 | 1.156285e-55 | -8.615850e-47 |
| Msa0622880 | Msa1075030 | 0.821009 | 5.070015e-53 | -8.615850e-47 |
| Msa0622880 | Msa1106680 | 0.800928 | 1.145113e-48 | -8.615850e-47 |
| Msa0622880 | Msa1106960 | 0.836865 | 7.281468e-57 | -8.615850e-47 |
| Msa0622880 | Msa1108560 | 0.804224 | 2.393306e-49 | -8.615850e-47 |
| Msa0622880 | Msa1115900 | 0.810950 | 8.933569e-51 | -8.615850e-47 |
| Msa0622880 | Msa1236680 | 0.826777 | 2.251993e-54 | -8.615850e-47 |
| Msa0622880 | Msa1269050 | 0.824191 | 9.228350e-54 | -8.615850e-47 |
| Msa0622880 | Msa1323080 | 0.813441 | 2.555688e-51 | -8.615850e-47 |
| Msa0622880 | Msa1377200 | 0.975975 | 5.982253e-141 | -8.615850e-47 |
| Msa0622880 | Msa1409600 | 0.801678 | 8.037625e-49 | -8.615850e-47 |
| Msa0622880 | Msa1445890 | 0.806808 | 6.871595e-50 | -8.615850e-47 |
| Msa0622880 | Msa1445900 | 0.823314 | 1.480385e-53 | -8.615850e-47 |
| Msa0622880 | Msa1459610 | 0.801537 | 8.594882e-49 | -8.615850e-47 |
| Msa0209060 | Msa0622880 | 0.806325 | 8.688520e-50 | -8.615850e-47 |
| Msa0219800 | Msa0622880 | 0.984019 | 2.328477e-159 | -8.615850e-47 |
| Msa0386910 | Msa0622880 | 0.801364 | 9.323816e-49 | -8.615850e-47 |
| Msa0414480 | Msa0622880 | 0.808641 | 2.803056e-50 | -8.615850e-47 |
| Msa0425950 | Msa0622880 | 0.818655 | 1.750266e-52 | -8.615850e-47 |
| Msa0426030 | Msa0622880 | 0.812454 | 4.206303e-51 | -8.615850e-47 |
| Msa0426170 | Msa0622880 | 0.805432 | 1.338968e-49 | -8.615850e-47 |
| Msa0288540 | Msa0622880 | 0.804791 | 1.822875e-49 | -8.615850e-47 |
| Msa0326770 | Msa0622880 | 0.806068 | 9.841177e-50 | -8.615850e-47 |
| Msa0354550 | Msa0622880 | 0.801517 | 8.676042e-49 | -8.615850e-47 |
| Msa0482790 | Msa0622880 | 0.819006 | 1.456921e-52 | -8.615850e-47 |
| Msa0523720 | Msa0622880 | 0.808223 | 3.442673e-50 | -8.615850e-47 |
| Msa0531080 | Msa0622880 | 0.800859 | 1.182876e-48 | -8.615850e-47 |
| Msa0535570 | Msa0622880 | 0.801792 | 7.616165e-49 | -8.615850e-47 |
| Msa0547330 | Msa0622880 | 0.809702 | 1.660586e-50 | -8.615850e-47 |
| Msa0587920 | Msa0622880 | 0.813241 | 2.827778e-51 | -8.615850e-47 |
| Msa0591490 | Msa0622880 | 0.825475 | 4.594372e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622880 | MtrunA17_Chr2g0323021 | 94.298 | 228 | 13 | 0 | 1 | 228 | 1 | 228 | 7.50e-149 | 413 |
| Msa0622880 | MtrunA17_Chr6g0481491 | 45.133 | 113 | 61 | 1 | 10 | 122 | 13 | 124 | 1.81e-34 | 122 |
| Msa0622880 | MtrunA17_Chr8g0335571 | 44.828 | 116 | 59 | 3 | 11 | 122 | 8 | 122 | 5.23e-30 | 110 |
| Msa0622880 | MtrunA17_Chr1g0196801 | 46.392 | 97 | 51 | 1 | 22 | 118 | 20 | 115 | 2.15e-29 | 108 |
| Msa0622880 | MtrunA17_Chr8g0335531 | 45.690 | 116 | 58 | 3 | 11 | 122 | 8 | 122 | 2.36e-29 | 108 |
| Msa0622880 | MtrunA17_Chr3g0132431 | 46.457 | 127 | 56 | 5 | 12 | 136 | 12 | 128 | 3.11e-28 | 105 |
| Msa0622880 | MtrunA17_Chr6g0459441 | 47.059 | 102 | 52 | 2 | 18 | 118 | 19 | 119 | 1.06e-27 | 103 |
| Msa0622880 | MtrunA17_Chr3g0132441 | 45.918 | 98 | 52 | 1 | 21 | 118 | 22 | 118 | 2.51e-25 | 98.2 |
| Msa0622880 | MtrunA17_Chr3g0132701 | 43.802 | 121 | 64 | 4 | 1 | 118 | 1 | 120 | 5.12e-25 | 98.2 |
| Msa0622880 | MtrunA17_Chr3g0132511 | 43.802 | 121 | 64 | 4 | 1 | 118 | 1 | 120 | 1.11e-24 | 97.4 |
| Msa0622880 | MtrunA17_Chr8g0380901 | 40.870 | 115 | 63 | 4 | 6 | 119 | 9 | 119 | 1.47e-24 | 94.0 |
| Msa0622880 | MtrunA17_Chr1g0205701 | 38.211 | 123 | 70 | 3 | 6 | 125 | 8 | 127 | 2.01e-24 | 95.5 |
| Msa0622880 | MtrunA17_Chr5g0394321 | 35.057 | 174 | 92 | 7 | 1 | 168 | 1 | 159 | 2.86e-24 | 95.1 |
| Msa0622880 | MtrunA17_Chr2g0289741 | 36.486 | 148 | 80 | 6 | 1 | 141 | 4 | 144 | 5.19e-24 | 94.4 |
| Msa0622880 | MtrunA17_Chr1g0150131 | 37.313 | 134 | 78 | 3 | 8 | 136 | 9 | 141 | 5.72e-24 | 94.4 |
| Msa0622880 | MtrunA17_Chr3g0132411 | 42.857 | 119 | 61 | 3 | 12 | 129 | 51 | 163 | 5.74e-22 | 89.0 |
| Msa0622880 | MtrunA17_Chr3g0136871 | 33.548 | 155 | 83 | 4 | 22 | 171 | 24 | 163 | 8.27e-21 | 85.9 |
| Msa0622880 | MtrunA17_Chr8g0360371 | 32.836 | 134 | 86 | 3 | 4 | 134 | 3 | 135 | 8.67e-21 | 88.6 |
| Msa0622880 | MtrunA17_Chr4g0064041 | 36.923 | 130 | 75 | 4 | 6 | 129 | 9 | 137 | 3.11e-20 | 87.8 |
| Msa0622880 | MtrunA17_Chr4g0064041 | 44.565 | 92 | 46 | 2 | 33 | 119 | 198 | 289 | 2.45e-19 | 85.5 |
| Msa0622880 | MtrunA17_Chr6g0453921 | 36.913 | 149 | 84 | 7 | 6 | 147 | 18 | 163 | 5.64e-20 | 84.0 |
| Msa0622880 | MtrunA17_Chr7g0253701 | 36.975 | 119 | 71 | 4 | 6 | 122 | 8 | 124 | 9.17e-20 | 82.8 |
| Msa0622880 | MtrunA17_Chr7g0253671 | 36.975 | 119 | 71 | 4 | 6 | 122 | 8 | 124 | 9.17e-20 | 82.8 |
| Msa0622880 | MtrunA17_Chr2g0324711 | 37.600 | 125 | 74 | 3 | 1 | 122 | 1 | 124 | 1.93e-19 | 85.5 |
| Msa0622880 | MtrunA17_Chr2g0301431 | 37.607 | 117 | 65 | 5 | 7 | 119 | 11 | 123 | 5.94e-19 | 79.7 |
| Msa0622880 | MtrunA17_Chr2g0306461 | 36.207 | 116 | 70 | 2 | 6 | 118 | 9 | 123 | 1.42e-18 | 80.5 |
| Msa0622880 | MtrunA17_Chr2g0331181 | 37.615 | 109 | 61 | 3 | 27 | 130 | 29 | 135 | 1.96e-18 | 80.1 |
| Msa0622880 | MtrunA17_Chr1g0177341 | 34.746 | 118 | 73 | 4 | 6 | 121 | 7 | 122 | 4.16e-18 | 78.2 |
| Msa0622880 | MtrunA17_Chr1g0177331 | 34.746 | 118 | 73 | 4 | 6 | 121 | 7 | 122 | 4.16e-18 | 78.2 |
| Msa0622880 | MtrunA17_Chr5g0440711 | 35.433 | 127 | 77 | 4 | 5 | 128 | 9 | 133 | 1.39e-17 | 76.6 |
| Msa0622880 | MtrunA17_Chr7g0253681 | 33.613 | 119 | 76 | 3 | 6 | 122 | 8 | 125 | 1.62e-17 | 77.0 |
| Msa0622880 | MtrunA17_Chr6g0453801 | 33.540 | 161 | 99 | 5 | 6 | 163 | 16 | 171 | 5.50e-17 | 75.9 |
| Msa0622880 | MtrunA17_Chr4g0040291 | 31.169 | 154 | 86 | 6 | 27 | 177 | 27 | 163 | 5.85e-17 | 75.9 |
| Msa0622880 | MtrunA17_Chr4g0073921 | 35.659 | 129 | 74 | 4 | 6 | 128 | 9 | 134 | 8.07e-17 | 77.0 |
| Msa0622880 | MtrunA17_Chr2g0324721 | 31.868 | 182 | 107 | 6 | 4 | 180 | 6 | 175 | 9.07e-17 | 75.9 |
| Msa0622880 | MtrunA17_Chr7g0253731 | 34.746 | 118 | 73 | 4 | 7 | 122 | 8 | 123 | 9.13e-17 | 74.7 |
| Msa0622880 | MtrunA17_Chr4g0041811 | 34.783 | 115 | 69 | 3 | 13 | 122 | 20 | 133 | 3.20e-16 | 74.7 |
| Msa0622880 | MtrunA17_Chr8g0387804 | 35.833 | 120 | 68 | 4 | 3 | 118 | 11 | 125 | 5.30e-16 | 72.0 |
| Msa0622880 | MtrunA17_Chr8g0385021 | 30.151 | 199 | 110 | 7 | 4 | 180 | 3 | 194 | 7.54e-16 | 74.7 |
| Msa0622880 | MtrunA17_Chr6g0458331 | 36.559 | 93 | 58 | 1 | 43 | 135 | 59 | 150 | 8.56e-16 | 72.4 |
| Msa0622880 | MtrunA17_Chr8g0385031 | 30.000 | 220 | 114 | 8 | 4 | 195 | 3 | 210 | 1.36e-15 | 74.3 |
| Msa0622880 | MtrunA17_Chr3g0125791 | 40.000 | 100 | 55 | 4 | 20 | 118 | 28 | 123 | 1.73e-15 | 70.5 |
| Msa0622880 | MtrunA17_Chr7g0253631 | 35.897 | 117 | 68 | 3 | 9 | 119 | 5 | 120 | 2.26e-15 | 72.8 |
| Msa0622880 | MtrunA17_Chr4g0062341 | 31.579 | 152 | 92 | 5 | 6 | 147 | 13 | 162 | 2.52e-15 | 71.6 |
| Msa0622880 | MtrunA17_Chr4g0062311 | 31.579 | 152 | 92 | 5 | 6 | 147 | 13 | 162 | 2.52e-15 | 71.6 |
| Msa0622880 | MtrunA17_Chr3g0125761 | 34.454 | 119 | 69 | 6 | 5 | 119 | 11 | 124 | 2.71e-15 | 70.1 |
| Msa0622880 | MtrunA17_Chr4g0039721 | 31.884 | 138 | 85 | 4 | 6 | 136 | 13 | 148 | 2.90e-15 | 71.2 |
| Msa0622880 | MtrunA17_Chr4g0073901 | 30.435 | 138 | 85 | 4 | 6 | 137 | 9 | 141 | 3.68e-15 | 70.9 |
| Msa0622880 | MtrunA17_Chr3g0144921 | 32.520 | 123 | 80 | 3 | 25 | 145 | 30 | 151 | 5.61e-15 | 70.1 |
| Msa0622880 | MtrunA17_Chr1g0188981 | 38.961 | 77 | 46 | 1 | 43 | 118 | 51 | 127 | 5.86e-15 | 70.9 |
| Msa0622880 | MtrunA17_Chr7g0253641 | 34.615 | 104 | 66 | 2 | 19 | 121 | 20 | 122 | 7.46e-15 | 71.2 |
| Msa0622880 | MtrunA17_Chr2g0317231 | 33.333 | 129 | 78 | 4 | 1 | 124 | 1 | 126 | 7.97e-15 | 73.2 |
| Msa0622880 | MtrunA17_Chr4g0064031 | 33.582 | 134 | 78 | 5 | 14 | 137 | 17 | 149 | 1.07e-14 | 69.3 |
| Msa0622880 | MtrunA17_Chr6g0453791 | 38.760 | 129 | 67 | 8 | 25 | 148 | 31 | 152 | 1.81e-14 | 68.9 |
| Msa0622880 | MtrunA17_Chr5g0440804 | 34.821 | 112 | 68 | 4 | 20 | 128 | 24 | 133 | 3.07e-14 | 68.2 |
| Msa0622880 | MtrunA17_Chr6g0483981 | 33.333 | 162 | 92 | 5 | 42 | 199 | 47 | 196 | 3.40e-14 | 71.2 |
| Msa0622880 | MtrunA17_Chr4g0033131 | 34.091 | 132 | 74 | 5 | 6 | 130 | 9 | 134 | 1.18e-13 | 66.6 |
| Msa0622880 | MtrunA17_Chr4g0033531 | 34.091 | 132 | 74 | 5 | 6 | 130 | 9 | 134 | 1.18e-13 | 66.6 |
| Msa0622880 | MtrunA17_Chr7g0253761 | 33.981 | 103 | 62 | 4 | 19 | 118 | 20 | 119 | 1.17e-12 | 63.9 |
| Msa0622880 | MtrunA17_Chr2g0319611 | 37.037 | 108 | 60 | 5 | 22 | 122 | 23 | 129 | 1.41e-12 | 65.5 |
| Msa0622880 | MtrunA17_Chr7g0256441 | 29.221 | 154 | 74 | 4 | 22 | 171 | 24 | 146 | 3.37e-12 | 62.4 |
| Msa0622880 | MtrunA17_Chr8g0385041 | 35.714 | 154 | 79 | 9 | 27 | 169 | 27 | 171 | 3.61e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0622880 | AT2G32300.1 | 48.507 | 134 | 65 | 4 | 1 | 131 | 1 | 133 | 2.37e-42 | 144 |
| Msa0622880 | AT2G32300.2 | 48.507 | 134 | 65 | 4 | 1 | 131 | 31 | 163 | 1.18e-41 | 143 |
| Msa0622880 | AT3G27200.1 | 38.136 | 118 | 70 | 3 | 6 | 121 | 6 | 122 | 7.04e-29 | 107 |
| Msa0622880 | AT3G60270.1 | 48.936 | 94 | 48 | 0 | 29 | 122 | 29 | 122 | 2.06e-27 | 103 |
| Msa0622880 | AT5G07475.1 | 35.849 | 159 | 94 | 4 | 4 | 159 | 9 | 162 | 2.15e-27 | 103 |
| Msa0622880 | AT5G53870.2 | 34.737 | 190 | 106 | 6 | 4 | 177 | 10 | 197 | 1.33e-26 | 105 |
| Msa0622880 | AT5G53870.1 | 34.737 | 190 | 106 | 6 | 4 | 177 | 10 | 197 | 1.78e-26 | 105 |
| Msa0622880 | AT2G25060.1 | 36.232 | 138 | 83 | 2 | 15 | 147 | 21 | 158 | 9.03e-25 | 96.7 |
| Msa0622880 | AT2G31050.1 | 39.062 | 128 | 70 | 3 | 12 | 131 | 10 | 137 | 5.05e-24 | 95.5 |
| Msa0622880 | AT2G26720.1 | 39.640 | 111 | 66 | 1 | 12 | 121 | 16 | 126 | 1.29e-23 | 94.4 |
| Msa0622880 | AT4G30590.1 | 35.115 | 131 | 75 | 4 | 1 | 122 | 1 | 130 | 3.77e-22 | 90.1 |
| Msa0622880 | AT4G31840.1 | 35.772 | 123 | 73 | 3 | 27 | 144 | 29 | 150 | 3.57e-21 | 87.4 |
| Msa0622880 | AT4G27520.1 | 38.686 | 137 | 75 | 5 | 4 | 135 | 13 | 145 | 5.49e-21 | 90.1 |
| Msa0622880 | AT3G60280.1 | 42.222 | 90 | 52 | 0 | 33 | 122 | 31 | 120 | 1.16e-20 | 87.0 |
| Msa0622880 | AT1G72230.1 | 42.353 | 85 | 49 | 0 | 34 | 118 | 31 | 115 | 1.80e-20 | 85.5 |
| Msa0622880 | AT5G57920.1 | 35.294 | 102 | 61 | 2 | 26 | 122 | 24 | 125 | 4.08e-20 | 84.7 |
| Msa0622880 | AT5G57920.3 | 35.294 | 102 | 61 | 2 | 26 | 122 | 56 | 157 | 6.59e-20 | 84.7 |
| Msa0622880 | AT5G57920.2 | 35.294 | 102 | 61 | 2 | 26 | 122 | 23 | 124 | 1.32e-19 | 83.2 |
| Msa0622880 | AT5G26330.1 | 29.670 | 182 | 103 | 6 | 6 | 184 | 5 | 164 | 3.33e-19 | 82.4 |
| Msa0622880 | AT2G44790.1 | 40.659 | 91 | 52 | 1 | 34 | 122 | 36 | 126 | 1.13e-18 | 81.3 |
| Msa0622880 | AT3G17675.1 | 36.207 | 116 | 71 | 3 | 6 | 119 | 12 | 126 | 2.02e-18 | 78.6 |
| Msa0622880 | AT4G12880.1 | 39.000 | 100 | 56 | 4 | 22 | 118 | 26 | 123 | 5.12e-18 | 77.8 |
| Msa0622880 | AT5G25090.1 | 35.780 | 109 | 65 | 2 | 15 | 118 | 16 | 124 | 5.27e-18 | 79.0 |
| Msa0622880 | AT2G23990.1 | 35.897 | 117 | 69 | 3 | 27 | 137 | 29 | 145 | 2.40e-17 | 77.8 |
| Msa0622880 | AT1G22480.1 | 45.882 | 85 | 46 | 0 | 34 | 118 | 27 | 111 | 6.91e-17 | 75.9 |
| Msa0622880 | AT3G20570.1 | 35.714 | 112 | 67 | 3 | 15 | 122 | 20 | 130 | 1.55e-16 | 75.5 |
| Msa0622880 | AT1G64640.1 | 36.842 | 95 | 57 | 2 | 43 | 134 | 53 | 147 | 1.89e-15 | 72.4 |
| Msa0622880 | AT1G48940.1 | 35.115 | 131 | 76 | 4 | 1 | 124 | 1 | 129 | 2.13e-15 | 72.0 |
| Msa0622880 | AT4G28365.1 | 32.143 | 140 | 88 | 4 | 3 | 136 | 4 | 142 | 3.13e-15 | 72.0 |
| Msa0622880 | AT4G32490.1 | 28.144 | 167 | 118 | 2 | 3 | 167 | 9 | 175 | 3.10e-13 | 67.0 |
| Msa0622880 | AT2G23990.2 | 34.884 | 129 | 55 | 6 | 27 | 130 | 29 | 153 | 4.86e-13 | 66.6 |
| Msa0622880 | AT3G18590.1 | 31.452 | 124 | 72 | 4 | 9 | 121 | 6 | 127 | 7.62e-13 | 65.1 |
| Msa0622880 | AT5G14345.1 | 32.955 | 88 | 58 | 1 | 35 | 122 | 30 | 116 | 8.67e-13 | 64.3 |
| Msa0622880 | AT1G79800.1 | 31.250 | 96 | 65 | 1 | 43 | 138 | 56 | 150 | 1.48e-12 | 64.7 |
| Msa0622880 | AT5G20230.1 | 35.789 | 95 | 59 | 2 | 42 | 134 | 44 | 138 | 4.60e-12 | 63.2 |
| Msa0622880 | AT4G12880.2 | 38.889 | 72 | 40 | 3 | 49 | 118 | 16 | 85 | 9.80e-12 | 60.1 |
| Msa0622880 | AT2G02850.1 | 34.066 | 91 | 56 | 3 | 29 | 118 | 39 | 126 | 2.62e-11 | 59.7 |
| Msa0622880 | AT3G53330.1 | 31.356 | 118 | 72 | 4 | 29 | 142 | 191 | 303 | 4.96e-11 | 61.6 |
Find 63 sgRNAs with CRISPR-Local
Find 136 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAAAGGACTTGGCGCTTC+AGG | 0.262695 | 4_2:-75603507 | None:intergenic |
| TGTGGCTATGCTAATCAAAT+TGG | 0.271323 | 4_2:+75602864 | Msa0622880:CDS |
| CGATTTCAACCTTCATTCCT+TGG | 0.319611 | 4_2:-75603356 | None:intergenic |
| TACTTCATTTGTGGAACAAT+TGG | 0.325954 | 4_2:+75603324 | Msa0622880:CDS |
| CCATCATTGTAGGATTGAAT+TGG | 0.330428 | 4_2:-75603264 | None:intergenic |
| CATCATGGTTTGGTGGATAC+TGG | 0.344644 | 4_2:-75603194 | None:intergenic |
| GTGTTTATGACCTTCTTCTA+AGG | 0.345543 | 4_2:+75603693 | Msa0622880:CDS |
| ATTGAATTGGATTTGTTTGC+TGG | 0.369249 | 4_2:-75603251 | None:intergenic |
| TAAACTCAACACTACTGAAA+TGG | 0.375504 | 4_2:-75603664 | None:intergenic |
| TTTGTATCCCACCCACCATT+TGG | 0.382646 | 4_2:-75602916 | None:intergenic |
| GGCTTGTAGATTTCCTTTCT+CGG | 0.389537 | 4_2:-75603640 | None:intergenic |
| TGTCTCCCACTGAAAATTGC+TGG | 0.409535 | 4_2:-75602966 | None:intergenic |
| ACCATTCCTCTCACATCAAC+AGG | 0.409662 | 4_2:+75603294 | Msa0622880:CDS |
| AACTCAGTGGATGGAATCAT+TGG | 0.412975 | 4_2:-75603561 | None:intergenic |
| GGTTGTGGCACCATCATTGT+AGG | 0.418651 | 4_2:-75603274 | None:intergenic |
| GGCAAAAGATACTTCATTTG+TGG | 0.426964 | 4_2:+75603315 | Msa0622880:CDS |
| ATTGAAGGTGCTGCTGCTAC+TGG | 0.429684 | 4_2:-75603411 | None:intergenic |
| CAAACTCAAACCTTCAATCA+TGG | 0.439667 | 4_2:+75602935 | Msa0622880:CDS |
| CACATTGTTGGAGGACCAAA+TGG | 0.441037 | 4_2:+75602901 | Msa0622880:CDS |
| TCGGCCTCATCGACCGAGAA+AGG | 0.446703 | 4_2:+75603627 | Msa0622880:CDS |
| GCTGCTGCTACTGGCGAGGC+AGG | 0.458894 | 4_2:-75603402 | None:intergenic |
| ACTTCAACCACATCATGGTT+TGG | 0.472827 | 4_2:-75603204 | None:intergenic |
| TGTGTTTCAAACAAAGGACT+TGG | 0.474320 | 4_2:-75603516 | None:intergenic |
| TCCTGTGAATGTTGTGCTAT+AGG | 0.480835 | 4_2:-75603600 | None:intergenic |
| TCCTATAGCACAACATTCAC+AGG | 0.486894 | 4_2:+75603599 | Msa0622880:CDS |
| GAGGGAATGATGGAAATCAT+TGG | 0.490266 | 4_2:-75603444 | None:intergenic |
| CCAATTCAATCCTACAATGA+TGG | 0.493235 | 4_2:+75603264 | Msa0622880:CDS |
| AATTGGATTTGTTTGCTGGC+AGG | 0.504490 | 4_2:-75603247 | None:intergenic |
| ATGGCTACAAATCACATTGT+TGG | 0.506134 | 4_2:+75602889 | Msa0622880:CDS |
| ATTGGAGAGTCTGCTATTGA+AGG | 0.507517 | 4_2:-75603426 | None:intergenic |
| ACATTGCAGCCAAGGAATGA+AGG | 0.511245 | 4_2:+75603347 | Msa0622880:CDS |
| GTCTCCCACTGAAAATTGCT+GGG | 0.517061 | 4_2:-75602965 | None:intergenic |
| ACAATTGGACATTGCAGCCA+AGG | 0.522512 | 4_2:+75603339 | Msa0622880:CDS |
| TTGTAACTTCAACCACATCA+TGG | 0.532734 | 4_2:-75603209 | None:intergenic |
| TCCGCTTGTGTTTCAAACAA+AGG | 0.536728 | 4_2:-75603522 | None:intergenic |
| GCCTGTTGATGTGAGAGGAA+TGG | 0.541643 | 4_2:-75603295 | None:intergenic |
| AACAATGTGATTTGTAGCCA+TGG | 0.542196 | 4_2:-75602887 | None:intergenic |
| TCCTTTGTTTGAAACACAAG+CGG | 0.548392 | 4_2:+75603521 | Msa0622880:CDS |
| GGGAAGATGCCCATGATTGA+AGG | 0.551803 | 4_2:-75602945 | None:intergenic |
| AAACTCAAACCTTCAATCAT+GGG | 0.565295 | 4_2:+75602936 | Msa0622880:CDS |
| AGGTTCTGCAGAGGGAATGA+TGG | 0.574123 | 4_2:-75603454 | None:intergenic |
| TTGGAGGACCAAATGGTGGG+TGG | 0.577194 | 4_2:+75602908 | Msa0622880:CDS |
| GATGAAACAGTAGATTCTGC+AGG | 0.577330 | 4_2:-75603474 | None:intergenic |
| ATTTCCTTTCTCGGTCGATG+AGG | 0.581260 | 4_2:-75603631 | None:intergenic |
| GGAGCTAGAAACTCAGTGGA+TGG | 0.587416 | 4_2:-75603570 | None:intergenic |
| TGTTGTGCTATAGGAGAGGA+AGG | 0.587966 | 4_2:-75603591 | None:intergenic |
| ACAACATTCACAGGATGTAT+CGG | 0.591172 | 4_2:+75603608 | Msa0622880:CDS |
| TGGAGGACCAAATGGTGGGT+GGG | 0.594340 | 4_2:+75602909 | Msa0622880:CDS |
| TATGCTAATCAAATTGGCCA+TGG | 0.594784 | 4_2:+75602870 | Msa0622880:CDS |
| AGGTGCTGCTGCTACTGGCG+AGG | 0.595101 | 4_2:-75603406 | None:intergenic |
| AGTAGTGTTGAGTTTAGTAG+CGG | 0.598482 | 4_2:+75603671 | Msa0622880:CDS |
| GCTACAAATCACATTGTTGG+AGG | 0.598903 | 4_2:+75602892 | Msa0622880:CDS |
| GGAATCATTGGAGAGAGTGT+AGG | 0.602725 | 4_2:-75603549 | None:intergenic |
| ACTCAACACTACTGAAATGG+AGG | 0.602890 | 4_2:-75603661 | None:intergenic |
| GATTCTGCAGGTTCTGCAGA+GGG | 0.602914 | 4_2:-75603462 | None:intergenic |
| TCAACCACATCATGGTTTGG+TGG | 0.604647 | 4_2:-75603201 | None:intergenic |
| AGATTCTGCAGGTTCTGCAG+AGG | 0.632775 | 4_2:-75603463 | None:intergenic |
| GGAAGGAGCTAGAAACTCAG+TGG | 0.633216 | 4_2:-75603574 | None:intergenic |
| TGATGTGAGAGGAATGGTTG+TGG | 0.649255 | 4_2:-75603289 | None:intergenic |
| ATTGTTGGAGGACCAAATGG+TGG | 0.666142 | 4_2:+75602904 | Msa0622880:CDS |
| GTATCCACCAAACCATGATG+TGG | 0.674142 | 4_2:+75603197 | Msa0622880:CDS |
| TTGTTGGAGGACCAAATGGT+GGG | 0.681492 | 4_2:+75602905 | Msa0622880:CDS |
| TGAATGTTGTGCTATAGGAG+AGG | 0.726891 | 4_2:-75603595 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATATAGTAAGCGCTTAATTA+AGG | + | chr4_2:75603053-75603072 | Msa0622880:intron | 25.0% |
| !!! | ATGAATTACTTAGCTTTGTT+TGG | - | chr4_2:75603086-75603105 | None:intergenic | 25.0% |
| ! | ATATAGTAAGCGCTTAATTA+AGG | + | chr4_2:75603053-75603072 | Msa0622880:intron | 25.0% |
| !!! | ATGAATTACTTAGCTTTGTT+TGG | - | chr4_2:75603086-75603105 | None:intergenic | 25.0% |
| !!! | CATTCTAAGAGTATCTTTTG+TGG | + | chr4_2:75602846-75602865 | Msa0622880:CDS | 30.0% |
| AAACTCAAACCTTCAATCAT+GGG | + | chr4_2:75602936-75602955 | Msa0622880:CDS | 30.0% | |
| ! | ATTGAATTGGATTTGTTTGC+TGG | - | chr4_2:75603254-75603273 | None:intergenic | 30.0% |
| TACTTCATTTGTGGAACAAT+TGG | + | chr4_2:75603324-75603343 | Msa0622880:CDS | 30.0% | |
| TAAACTCAACACTACTGAAA+TGG | - | chr4_2:75603667-75603686 | None:intergenic | 30.0% | |
| !!! | CATTCTAAGAGTATCTTTTG+TGG | + | chr4_2:75602846-75602865 | Msa0622880:CDS | 30.0% |
| AAACTCAAACCTTCAATCAT+GGG | + | chr4_2:75602936-75602955 | Msa0622880:CDS | 30.0% | |
| ! | ATTGAATTGGATTTGTTTGC+TGG | - | chr4_2:75603254-75603273 | None:intergenic | 30.0% |
| TACTTCATTTGTGGAACAAT+TGG | + | chr4_2:75603324-75603343 | Msa0622880:CDS | 30.0% | |
| TAAACTCAACACTACTGAAA+TGG | - | chr4_2:75603667-75603686 | None:intergenic | 30.0% | |
| TGTGGCTATGCTAATCAAAT+TGG | + | chr4_2:75602864-75602883 | Msa0622880:CDS | 35.0% | |
| TATGCTAATCAAATTGGCCA+TGG | + | chr4_2:75602870-75602889 | Msa0622880:CDS | 35.0% | |
| ! | AACAATGTGATTTGTAGCCA+TGG | - | chr4_2:75602890-75602909 | None:intergenic | 35.0% |
| ATGGCTACAAATCACATTGT+TGG | + | chr4_2:75602889-75602908 | Msa0622880:CDS | 35.0% | |
| CAAACTCAAACCTTCAATCA+TGG | + | chr4_2:75602935-75602954 | Msa0622880:CDS | 35.0% | |
| TTGTAACTTCAACCACATCA+TGG | - | chr4_2:75603212-75603231 | None:intergenic | 35.0% | |
| CCATCATTGTAGGATTGAAT+TGG | - | chr4_2:75603267-75603286 | None:intergenic | 35.0% | |
| CCAATTCAATCCTACAATGA+TGG | + | chr4_2:75603264-75603283 | Msa0622880:CDS | 35.0% | |
| GGCAAAAGATACTTCATTTG+TGG | + | chr4_2:75603315-75603334 | Msa0622880:CDS | 35.0% | |
| TGTGTTTCAAACAAAGGACT+TGG | - | chr4_2:75603519-75603538 | None:intergenic | 35.0% | |
| ! | TCCTTTGTTTGAAACACAAG+CGG | + | chr4_2:75603521-75603540 | Msa0622880:CDS | 35.0% |
| ACAACATTCACAGGATGTAT+CGG | + | chr4_2:75603608-75603627 | Msa0622880:CDS | 35.0% | |
| ! | AGTAGTGTTGAGTTTAGTAG+CGG | + | chr4_2:75603671-75603690 | Msa0622880:CDS | 35.0% |
| TGTGGCTATGCTAATCAAAT+TGG | + | chr4_2:75602864-75602883 | Msa0622880:CDS | 35.0% | |
| TATGCTAATCAAATTGGCCA+TGG | + | chr4_2:75602870-75602889 | Msa0622880:CDS | 35.0% | |
| ! | AACAATGTGATTTGTAGCCA+TGG | - | chr4_2:75602890-75602909 | None:intergenic | 35.0% |
| ATGGCTACAAATCACATTGT+TGG | + | chr4_2:75602889-75602908 | Msa0622880:CDS | 35.0% | |
| CAAACTCAAACCTTCAATCA+TGG | + | chr4_2:75602935-75602954 | Msa0622880:CDS | 35.0% | |
| TTGTAACTTCAACCACATCA+TGG | - | chr4_2:75603212-75603231 | None:intergenic | 35.0% | |
| CCATCATTGTAGGATTGAAT+TGG | - | chr4_2:75603267-75603286 | None:intergenic | 35.0% | |
| CCAATTCAATCCTACAATGA+TGG | + | chr4_2:75603264-75603283 | Msa0622880:CDS | 35.0% | |
| GGCAAAAGATACTTCATTTG+TGG | + | chr4_2:75603315-75603334 | Msa0622880:CDS | 35.0% | |
| TGTGTTTCAAACAAAGGACT+TGG | - | chr4_2:75603519-75603538 | None:intergenic | 35.0% | |
| ! | TCCTTTGTTTGAAACACAAG+CGG | + | chr4_2:75603521-75603540 | Msa0622880:CDS | 35.0% |
| ACAACATTCACAGGATGTAT+CGG | + | chr4_2:75603608-75603627 | Msa0622880:CDS | 35.0% | |
| ! | AGTAGTGTTGAGTTTAGTAG+CGG | + | chr4_2:75603671-75603690 | Msa0622880:CDS | 35.0% |
| GCTACAAATCACATTGTTGG+AGG | + | chr4_2:75602892-75602911 | Msa0622880:CDS | 40.0% | |
| ! | ATCTTCCCAGCAATTTTCAG+TGG | + | chr4_2:75602960-75602979 | Msa0622880:CDS | 40.0% |
| ! | TCTTCCCAGCAATTTTCAGT+GGG | + | chr4_2:75602961-75602980 | Msa0622880:CDS | 40.0% |
| ACTTCAACCACATCATGGTT+TGG | - | chr4_2:75603207-75603226 | None:intergenic | 40.0% | |
| ! | AATTGGATTTGTTTGCTGGC+AGG | - | chr4_2:75603250-75603269 | None:intergenic | 40.0% |
| CGATTTCAACCTTCATTCCT+TGG | - | chr4_2:75603359-75603378 | None:intergenic | 40.0% | |
| ATTGGAGAGTCTGCTATTGA+AGG | - | chr4_2:75603429-75603448 | None:intergenic | 40.0% | |
| ! | GAGGGAATGATGGAAATCAT+TGG | - | chr4_2:75603447-75603466 | None:intergenic | 40.0% |
| GATGAAACAGTAGATTCTGC+AGG | - | chr4_2:75603477-75603496 | None:intergenic | 40.0% | |
| TCCGCTTGTGTTTCAAACAA+AGG | - | chr4_2:75603525-75603544 | None:intergenic | 40.0% | |
| AACTCAGTGGATGGAATCAT+TGG | - | chr4_2:75603564-75603583 | None:intergenic | 40.0% | |
| TGAATGTTGTGCTATAGGAG+AGG | - | chr4_2:75603598-75603617 | None:intergenic | 40.0% | |
| TCCTATAGCACAACATTCAC+AGG | + | chr4_2:75603599-75603618 | Msa0622880:CDS | 40.0% | |
| TCCTGTGAATGTTGTGCTAT+AGG | - | chr4_2:75603603-75603622 | None:intergenic | 40.0% | |
| GGCTTGTAGATTTCCTTTCT+CGG | - | chr4_2:75603643-75603662 | None:intergenic | 40.0% | |
| ACTCAACACTACTGAAATGG+AGG | - | chr4_2:75603664-75603683 | None:intergenic | 40.0% | |
| GCTACAAATCACATTGTTGG+AGG | + | chr4_2:75602892-75602911 | Msa0622880:CDS | 40.0% | |
| ! | ATCTTCCCAGCAATTTTCAG+TGG | + | chr4_2:75602960-75602979 | Msa0622880:CDS | 40.0% |
| ! | TCTTCCCAGCAATTTTCAGT+GGG | + | chr4_2:75602961-75602980 | Msa0622880:CDS | 40.0% |
| ACTTCAACCACATCATGGTT+TGG | - | chr4_2:75603207-75603226 | None:intergenic | 40.0% | |
| ! | AATTGGATTTGTTTGCTGGC+AGG | - | chr4_2:75603250-75603269 | None:intergenic | 40.0% |
| CGATTTCAACCTTCATTCCT+TGG | - | chr4_2:75603359-75603378 | None:intergenic | 40.0% | |
| ATTGGAGAGTCTGCTATTGA+AGG | - | chr4_2:75603429-75603448 | None:intergenic | 40.0% | |
| ! | GAGGGAATGATGGAAATCAT+TGG | - | chr4_2:75603447-75603466 | None:intergenic | 40.0% |
| GATGAAACAGTAGATTCTGC+AGG | - | chr4_2:75603477-75603496 | None:intergenic | 40.0% | |
| TCCGCTTGTGTTTCAAACAA+AGG | - | chr4_2:75603525-75603544 | None:intergenic | 40.0% | |
| AACTCAGTGGATGGAATCAT+TGG | - | chr4_2:75603564-75603583 | None:intergenic | 40.0% | |
| TGAATGTTGTGCTATAGGAG+AGG | - | chr4_2:75603598-75603617 | None:intergenic | 40.0% | |
| TCCTATAGCACAACATTCAC+AGG | + | chr4_2:75603599-75603618 | Msa0622880:CDS | 40.0% | |
| TCCTGTGAATGTTGTGCTAT+AGG | - | chr4_2:75603603-75603622 | None:intergenic | 40.0% | |
| GGCTTGTAGATTTCCTTTCT+CGG | - | chr4_2:75603643-75603662 | None:intergenic | 40.0% | |
| ACTCAACACTACTGAAATGG+AGG | - | chr4_2:75603664-75603683 | None:intergenic | 40.0% | |
| CACATTGTTGGAGGACCAAA+TGG | + | chr4_2:75602901-75602920 | Msa0622880:CDS | 45.0% | |
| ATTGTTGGAGGACCAAATGG+TGG | + | chr4_2:75602904-75602923 | Msa0622880:CDS | 45.0% | |
| TTGTTGGAGGACCAAATGGT+GGG | + | chr4_2:75602905-75602924 | Msa0622880:CDS | 45.0% | |
| TTTGTATCCCACCCACCATT+TGG | - | chr4_2:75602919-75602938 | None:intergenic | 45.0% | |
| GTCTCCCACTGAAAATTGCT+GGG | - | chr4_2:75602968-75602987 | None:intergenic | 45.0% | |
| TGTCTCCCACTGAAAATTGC+TGG | - | chr4_2:75602969-75602988 | None:intergenic | 45.0% | |
| !! | CATCATGGTTTGGTGGATAC+TGG | - | chr4_2:75603197-75603216 | None:intergenic | 45.0% |
| GTATCCACCAAACCATGATG+TGG | + | chr4_2:75603197-75603216 | Msa0622880:CDS | 45.0% | |
| ! | TCAACCACATCATGGTTTGG+TGG | - | chr4_2:75603204-75603223 | None:intergenic | 45.0% |
| TGATGTGAGAGGAATGGTTG+TGG | - | chr4_2:75603292-75603311 | None:intergenic | 45.0% | |
| ACCATTCCTCTCACATCAAC+AGG | + | chr4_2:75603294-75603313 | Msa0622880:CDS | 45.0% | |
| ! | CTTTTGCCTGTTGATGTGAG+AGG | - | chr4_2:75603303-75603322 | None:intergenic | 45.0% |
| ACAATTGGACATTGCAGCCA+AGG | + | chr4_2:75603339-75603358 | Msa0622880:CDS | 45.0% | |
| ACATTGCAGCCAAGGAATGA+AGG | + | chr4_2:75603347-75603366 | Msa0622880:CDS | 45.0% | |
| ! | GGAATCATTGGAGAGAGTGT+AGG | - | chr4_2:75603552-75603571 | None:intergenic | 45.0% |
| TGTTGTGCTATAGGAGAGGA+AGG | - | chr4_2:75603594-75603613 | None:intergenic | 45.0% | |
| ATTTCCTTTCTCGGTCGATG+AGG | - | chr4_2:75603634-75603653 | None:intergenic | 45.0% | |
| CACATTGTTGGAGGACCAAA+TGG | + | chr4_2:75602901-75602920 | Msa0622880:CDS | 45.0% | |
| ATTGTTGGAGGACCAAATGG+TGG | + | chr4_2:75602904-75602923 | Msa0622880:CDS | 45.0% | |
| TTGTTGGAGGACCAAATGGT+GGG | + | chr4_2:75602905-75602924 | Msa0622880:CDS | 45.0% | |
| TTTGTATCCCACCCACCATT+TGG | - | chr4_2:75602919-75602938 | None:intergenic | 45.0% | |
| GTCTCCCACTGAAAATTGCT+GGG | - | chr4_2:75602968-75602987 | None:intergenic | 45.0% | |
| TGTCTCCCACTGAAAATTGC+TGG | - | chr4_2:75602969-75602988 | None:intergenic | 45.0% | |
| !! | CATCATGGTTTGGTGGATAC+TGG | - | chr4_2:75603197-75603216 | None:intergenic | 45.0% |
| GTATCCACCAAACCATGATG+TGG | + | chr4_2:75603197-75603216 | Msa0622880:CDS | 45.0% | |
| ! | TCAACCACATCATGGTTTGG+TGG | - | chr4_2:75603204-75603223 | None:intergenic | 45.0% |
| TGATGTGAGAGGAATGGTTG+TGG | - | chr4_2:75603292-75603311 | None:intergenic | 45.0% | |
| ACCATTCCTCTCACATCAAC+AGG | + | chr4_2:75603294-75603313 | Msa0622880:CDS | 45.0% | |
| ! | CTTTTGCCTGTTGATGTGAG+AGG | - | chr4_2:75603303-75603322 | None:intergenic | 45.0% |
| ACAATTGGACATTGCAGCCA+AGG | + | chr4_2:75603339-75603358 | Msa0622880:CDS | 45.0% | |
| ACATTGCAGCCAAGGAATGA+AGG | + | chr4_2:75603347-75603366 | Msa0622880:CDS | 45.0% | |
| ! | GGAATCATTGGAGAGAGTGT+AGG | - | chr4_2:75603552-75603571 | None:intergenic | 45.0% |
| TGTTGTGCTATAGGAGAGGA+AGG | - | chr4_2:75603594-75603613 | None:intergenic | 45.0% | |
| ATTTCCTTTCTCGGTCGATG+AGG | - | chr4_2:75603634-75603653 | None:intergenic | 45.0% | |
| GGGAAGATGCCCATGATTGA+AGG | - | chr4_2:75602948-75602967 | None:intergenic | 50.0% | |
| GGTTGTGGCACCATCATTGT+AGG | - | chr4_2:75603277-75603296 | None:intergenic | 50.0% | |
| GCCTGTTGATGTGAGAGGAA+TGG | - | chr4_2:75603298-75603317 | None:intergenic | 50.0% | |
| !! | ATTGAAGGTGCTGCTGCTAC+TGG | - | chr4_2:75603414-75603433 | None:intergenic | 50.0% |
| AGGTTCTGCAGAGGGAATGA+TGG | - | chr4_2:75603457-75603476 | None:intergenic | 50.0% | |
| GATTCTGCAGGTTCTGCAGA+GGG | - | chr4_2:75603465-75603484 | None:intergenic | 50.0% | |
| AGATTCTGCAGGTTCTGCAG+AGG | - | chr4_2:75603466-75603485 | None:intergenic | 50.0% | |
| AACAAAGGACTTGGCGCTTC+AGG | - | chr4_2:75603510-75603529 | None:intergenic | 50.0% | |
| GGAGCTAGAAACTCAGTGGA+TGG | - | chr4_2:75603573-75603592 | None:intergenic | 50.0% | |
| GGAAGGAGCTAGAAACTCAG+TGG | - | chr4_2:75603577-75603596 | None:intergenic | 50.0% | |
| GGGAAGATGCCCATGATTGA+AGG | - | chr4_2:75602948-75602967 | None:intergenic | 50.0% | |
| GGTTGTGGCACCATCATTGT+AGG | - | chr4_2:75603277-75603296 | None:intergenic | 50.0% | |
| GCCTGTTGATGTGAGAGGAA+TGG | - | chr4_2:75603298-75603317 | None:intergenic | 50.0% | |
| !! | ATTGAAGGTGCTGCTGCTAC+TGG | - | chr4_2:75603414-75603433 | None:intergenic | 50.0% |
| AGGTTCTGCAGAGGGAATGA+TGG | - | chr4_2:75603457-75603476 | None:intergenic | 50.0% | |
| GATTCTGCAGGTTCTGCAGA+GGG | - | chr4_2:75603465-75603484 | None:intergenic | 50.0% | |
| AGATTCTGCAGGTTCTGCAG+AGG | - | chr4_2:75603466-75603485 | None:intergenic | 50.0% | |
| AACAAAGGACTTGGCGCTTC+AGG | - | chr4_2:75603510-75603529 | None:intergenic | 50.0% | |
| GGAGCTAGAAACTCAGTGGA+TGG | - | chr4_2:75603573-75603592 | None:intergenic | 50.0% | |
| GGAAGGAGCTAGAAACTCAG+TGG | - | chr4_2:75603577-75603596 | None:intergenic | 50.0% | |
| ! | TTGGAGGACCAAATGGTGGG+TGG | + | chr4_2:75602908-75602927 | Msa0622880:CDS | 55.0% |
| !! | TGGAGGACCAAATGGTGGGT+GGG | + | chr4_2:75602909-75602928 | Msa0622880:CDS | 55.0% |
| ! | TTGGAGGACCAAATGGTGGG+TGG | + | chr4_2:75602908-75602927 | Msa0622880:CDS | 55.0% |
| !! | TGGAGGACCAAATGGTGGGT+GGG | + | chr4_2:75602909-75602928 | Msa0622880:CDS | 55.0% |
| TCGGCCTCATCGACCGAGAA+AGG | + | chr4_2:75603627-75603646 | Msa0622880:CDS | 60.0% | |
| TCGGCCTCATCGACCGAGAA+AGG | + | chr4_2:75603627-75603646 | Msa0622880:CDS | 60.0% | |
| !! | AGGTGCTGCTGCTACTGGCG+AGG | - | chr4_2:75603409-75603428 | None:intergenic | 65.0% |
| !! | AGGTGCTGCTGCTACTGGCG+AGG | - | chr4_2:75603409-75603428 | None:intergenic | 65.0% |
| GCTGCTGCTACTGGCGAGGC+AGG | - | chr4_2:75603405-75603424 | None:intergenic | 70.0% | |
| GCTGCTGCTACTGGCGAGGC+AGG | - | chr4_2:75603405-75603424 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_2 | gene | 75602829 | 75603713 | 75602829 | ID=Msa0622880;Name=Msa0622880 |
| chr4_2 | mRNA | 75602829 | 75603713 | 75602829 | ID=Msa0622880-mRNA-1;Parent=Msa0622880;Name=Msa0622880-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|229 |
| chr4_2 | exon | 75602829 | 75602994 | 75602829 | ID=Msa0622880-mRNA-1:exon:22961;Parent=Msa0622880-mRNA-1 |
| chr4_2 | exon | 75603190 | 75603713 | 75603190 | ID=Msa0622880-mRNA-1:exon:22962;Parent=Msa0622880-mRNA-1 |
| chr4_2 | CDS | 75602829 | 75602994 | 75602829 | ID=Msa0622880-mRNA-1:cds;Parent=Msa0622880-mRNA-1 |
| chr4_2 | CDS | 75603190 | 75603713 | 75603190 | ID=Msa0622880-mRNA-1:cds;Parent=Msa0622880-mRNA-1 |
| Gene Sequence |
| Protein sequence |
