Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563820 | XP_013446593.2 | 98.476 | 525 | 8 | 0 | 1 | 525 | 23 | 547 | 0.0 | 1061 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563820 | sp|A0A1P8B760|AMI4G_ARATH | 60.950 | 484 | 175 | 5 | 30 | 508 | 34 | 508 | 0.0 | 562 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563820 | A0A072U452 | 98.476 | 525 | 8 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1060 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0131770 | Msa0563820 | 0.807687 | 4.474567e-50 | -8.615850e-47 |
| Msa0455760 | Msa0563820 | 0.814417 | 1.557132e-51 | -8.615850e-47 |
| Msa0363790 | Msa0563820 | 0.809234 | 2.092440e-50 | -8.615850e-47 |
| Msa0529890 | Msa0563820 | 0.805347 | 1.394875e-49 | -8.615850e-47 |
| Msa0563800 | Msa0563820 | 0.873166 | 1.815446e-67 | -8.615850e-47 |
| Msa0563820 | Msa0577520 | 0.845043 | 5.193936e-59 | -8.615850e-47 |
| Msa0563820 | Msa0625720 | 0.802571 | 5.266420e-49 | -8.615850e-47 |
| Msa0563820 | Msa0969520 | 0.805552 | 1.263181e-49 | -8.615850e-47 |
| Msa0563820 | Msa0974070 | 0.805319 | 1.413889e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563820 | MtrunA17_Chr8g0377651 | 98.476 | 525 | 8 | 0 | 1 | 525 | 1 | 525 | 0.0 | 1060 |
| Msa0563820 | MtrunA17_Chr8g0377641 | 87.234 | 517 | 62 | 3 | 3 | 517 | 1 | 515 | 0.0 | 923 |
| Msa0563820 | MtrunA17_Chr8g0377701 | 85.049 | 515 | 72 | 2 | 3 | 513 | 1 | 514 | 0.0 | 888 |
| Msa0563820 | MtrunA17_Chr8g0377691 | 84.526 | 517 | 74 | 2 | 3 | 515 | 1 | 515 | 0.0 | 882 |
| Msa0563820 | MtrunA17_Chr8g0377681 | 83.268 | 514 | 79 | 3 | 7 | 515 | 2 | 513 | 0.0 | 870 |
| Msa0563820 | MtrunA17_Chr4g0037521 | 60.825 | 485 | 181 | 7 | 31 | 508 | 25 | 507 | 0.0 | 572 |
| Msa0563820 | MtrunA17_Chr4g0037491 | 57.705 | 305 | 115 | 7 | 205 | 499 | 1 | 301 | 6.22e-113 | 337 |
| Msa0563820 | MtrunA17_Chr8g0377661 | 88.750 | 80 | 9 | 0 | 438 | 517 | 1 | 80 | 1.14e-42 | 146 |
| Msa0563820 | MtrunA17_Chr4g0037501 | 65.957 | 94 | 30 | 2 | 105 | 196 | 2 | 95 | 4.10e-31 | 115 |
| Msa0563820 | MtrunA17_Chr8g0385461 | 32.558 | 258 | 157 | 7 | 32 | 287 | 154 | 396 | 6.07e-29 | 120 |
| Msa0563820 | MtrunA17_Chr3g0097801 | 25.185 | 540 | 319 | 14 | 22 | 500 | 5 | 520 | 2.88e-27 | 115 |
| Msa0563820 | MtrunA17_Chr2g0279961 | 25.150 | 501 | 310 | 12 | 32 | 500 | 121 | 588 | 7.38e-22 | 99.4 |
| Msa0563820 | MtrunA17_Chr3g0130801 | 30.980 | 255 | 162 | 8 | 40 | 288 | 200 | 446 | 1.24e-15 | 80.1 |
| Msa0563820 | MtrunA17_Chr1g0191741 | 39.496 | 119 | 66 | 2 | 140 | 257 | 63 | 176 | 1.61e-14 | 75.9 |
| Msa0563820 | MtrunA17_Chr8g0384851 | 28.516 | 256 | 166 | 6 | 26 | 271 | 117 | 365 | 1.51e-12 | 70.1 |
| Msa0563820 | MtrunA17_Chr4g0050371 | 38.017 | 121 | 69 | 2 | 138 | 257 | 107 | 222 | 1.22e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0563820 | AT4G34880.2 | 60.950 | 484 | 175 | 5 | 30 | 508 | 34 | 508 | 0.0 | 562 |
| Msa0563820 | AT4G34880.1 | 53.830 | 483 | 165 | 6 | 30 | 508 | 34 | 462 | 2.38e-173 | 497 |
| Msa0563820 | AT5G07360.1 | 33.068 | 251 | 155 | 6 | 33 | 281 | 197 | 436 | 1.89e-27 | 117 |
| Msa0563820 | AT5G07360.3 | 33.068 | 251 | 155 | 6 | 33 | 281 | 197 | 436 | 1.89e-27 | 117 |
| Msa0563820 | AT3G25660.1 | 32.432 | 296 | 183 | 7 | 51 | 340 | 56 | 340 | 2.47e-25 | 110 |
| Msa0563820 | AT5G07360.2 | 32.669 | 251 | 149 | 7 | 33 | 281 | 197 | 429 | 2.41e-24 | 107 |
| Msa0563820 | AT5G64440.1 | 24.901 | 506 | 319 | 15 | 35 | 510 | 125 | 599 | 9.32e-22 | 99.4 |
| Msa0563820 | AT1G08980.1 | 39.695 | 131 | 70 | 3 | 140 | 266 | 64 | 189 | 9.47e-16 | 80.1 |
| Msa0563820 | AT5G09420.1 | 39.496 | 119 | 62 | 3 | 138 | 253 | 105 | 216 | 1.32e-11 | 67.4 |
Find 122 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACACATATACCGACCAATTT+TGG | 0.122914 | 4_1:+64289318 | None:intergenic |
| TGAGACCAACTGTTGGTTTA+AGG | 0.180487 | 4_1:+64291108 | None:intergenic |
| GTTGCATGGAATACCTATTT+TGG | 0.183488 | 4_1:-64292294 | Msa0563820:CDS |
| CAAGTTGTCTTGATGTTAAT+TGG | 0.201405 | 4_1:+64292453 | None:intergenic |
| GAGCCATTTGGAATTTGTTT+TGG | 0.235593 | 4_1:-64288974 | Msa0563820:CDS |
| GTGAAGCTACTAAATCTTTC+AGG | 0.241049 | 4_1:+64289385 | None:intergenic |
| ATGTCAAGATGGTCAGAAAA+TGG | 0.249306 | 4_1:-64289121 | Msa0563820:CDS |
| GCTGAAAAGACGAACGGTTT+TGG | 0.251634 | 4_1:-64289172 | Msa0563820:CDS |
| TATAAAATTGTAGGAGAAAA+TGG | 0.263811 | 4_1:-64289221 | Msa0563820:intron |
| AAATATTTCAGTGTAGATAT+TGG | 0.276171 | 4_1:-64292644 | Msa0563820:five_prime_UTR |
| GTGTCTTGCCTTGGGCTAAT+TGG | 0.289799 | 4_1:+64291065 | None:intergenic |
| AAAGCTGGTGCTATCATATT+AGG | 0.306724 | 4_1:-64292164 | Msa0563820:CDS |
| TGAGTGAGTGGTCACATTAC+AGG | 0.307159 | 4_1:-64292130 | Msa0563820:CDS |
| AATTGAGCATAGCCACCTTT+TGG | 0.307622 | 4_1:+64290754 | None:intergenic |
| TCTGCTTGTGCTAATGCATC+TGG | 0.313056 | 4_1:+64292365 | None:intergenic |
| CAGGCAAAGAGGTGCAGTTT+TGG | 0.328515 | 4_1:-64289505 | Msa0563820:CDS |
| AATATTTCAGTGTAGATATT+GGG | 0.330368 | 4_1:-64292643 | Msa0563820:five_prime_UTR |
| ATACAAAACCCAGTTCTAAA+AGG | 0.340481 | 4_1:-64292404 | Msa0563820:CDS |
| AGGAGAATGTAACTAGTATA+AGG | 0.343336 | 4_1:+64292564 | None:intergenic |
| AAGGCCTGAAGGGCATAAAA+TGG | 0.343475 | 4_1:+64291145 | None:intergenic |
| TACCCAACTGTGTCTTGCCT+TGG | 0.352871 | 4_1:+64291056 | None:intergenic |
| TTGATGTTAATTGGTTTCTC+TGG | 0.358585 | 4_1:+64292462 | None:intergenic |
| AAACACCAAGTTCTCTTTCA+AGG | 0.367223 | 4_1:-64292316 | Msa0563820:CDS |
| GTGTTATCCTTAACCAAAAT+AGG | 0.372541 | 4_1:+64292281 | None:intergenic |
| ACCCAACTGTGTCTTGCCTT+GGG | 0.380722 | 4_1:+64291057 | None:intergenic |
| CAATGAGAAACACCCAAAAT+TGG | 0.384496 | 4_1:-64289331 | Msa0563820:intron |
| GTGAGAGACTACTACGAGTT+TGG | 0.385190 | 4_1:-64290691 | Msa0563820:CDS |
| TTTAGCCACATACTGGCTAT+TGG | 0.398364 | 4_1:-64289040 | Msa0563820:CDS |
| TCTGATACAGTCCTACAAAT+TGG | 0.399411 | 4_1:+64290853 | None:intergenic |
| CTGGCTATTGGAGGTTATCC+TGG | 0.400039 | 4_1:-64289028 | Msa0563820:CDS |
| TATGAAAAGGGTGAGCCATT+TGG | 0.400795 | 4_1:-64288986 | Msa0563820:CDS |
| AATATCAGTAGCAGCAAATC+TGG | 0.401868 | 4_1:-64291201 | Msa0563820:CDS |
| TAAGGATAACACTGCAACTA+AGG | 0.409299 | 4_1:-64292270 | Msa0563820:CDS |
| TTGTAATTTCCAACTTCCTA+AGG | 0.412883 | 4_1:+64288870 | None:intergenic |
| CCCAGTTCTAAAAGGCATCT+TGG | 0.413564 | 4_1:-64292396 | Msa0563820:CDS |
| TTGTAGGAGAAAATGGAGTA+TGG | 0.417039 | 4_1:-64289214 | Msa0563820:intron |
| TAAGCAATTTCAATCAACTT+TGG | 0.417086 | 4_1:+64288932 | None:intergenic |
| AGCACCAGCTTTCCTTAACT+TGG | 0.417639 | 4_1:+64292175 | None:intergenic |
| AGCTTCACCGGTGAACAGTT+TGG | 0.420459 | 4_1:-64289370 | Msa0563820:CDS |
| CAGCTTGCACCAATACATCT+TGG | 0.421918 | 4_1:+64289191 | None:intergenic |
| GTTGGAAATTACAAATAAGA+TGG | 0.439425 | 4_1:-64288861 | Msa0563820:CDS |
| ATGTGGCTAAAGGACCAAAA+AGG | 0.440108 | 4_1:+64289052 | None:intergenic |
| TACAGGTCTAGTAAAGTTCC+TGG | 0.443202 | 4_1:-64292113 | Msa0563820:CDS |
| CAAGGATCATCCAATGTGTA+TGG | 0.446045 | 4_1:+64291245 | None:intergenic |
| TTGGTCCTTTAGCCACATAC+TGG | 0.448388 | 4_1:-64289047 | Msa0563820:CDS |
| GCCACCTCCCCTTAGGAAGT+TGG | 0.450869 | 4_1:-64288879 | Msa0563820:CDS |
| ATGTAACTAGTATAAGGAAT+TGG | 0.457413 | 4_1:+64292570 | None:intergenic |
| TAAGGCCCACCACTGAGTTA+AGG | 0.459410 | 4_1:+64291126 | None:intergenic |
| GCCCAAGGCAAGACACAGTT+GGG | 0.473558 | 4_1:-64291058 | Msa0563820:intron |
| TTCAGGCCTTAACTCAGTGG+TGG | 0.475317 | 4_1:-64291132 | Msa0563820:CDS |
| GGACTAAGAGGAAAGAGATT+AGG | 0.477099 | 4_1:-64290718 | Msa0563820:CDS |
| GATTGAGAATTCACTGGCCA+AGG | 0.482825 | 4_1:+64292520 | None:intergenic |
| TGTCAAGATGGTCAGAAAAT+GGG | 0.483186 | 4_1:-64289120 | Msa0563820:CDS |
| TGCAACCTTGAAAGAGAACT+TGG | 0.486425 | 4_1:+64292311 | None:intergenic |
| TCCAACTTCCTAAGGGGAGG+TGG | 0.486904 | 4_1:+64288878 | None:intergenic |
| CTAGTAAAGTTCCTGGTGGT+TGG | 0.493749 | 4_1:-64292106 | Msa0563820:CDS |
| TTCCTTGATTGAGAATTCAC+TGG | 0.494928 | 4_1:+64292514 | None:intergenic |
| TGTAATTTCCAACTTCCTAA+GGG | 0.496080 | 4_1:+64288871 | None:intergenic |
| TCAGAAAGCCACCTCCCCTT+AGG | 0.498866 | 4_1:-64288886 | Msa0563820:CDS |
| TGTTCCAGCAGGATATGAAA+AGG | 0.501251 | 4_1:-64288999 | Msa0563820:CDS |
| CCTCCAAAACAAATTCCAAA+TGG | 0.513160 | 4_1:+64288971 | None:intergenic |
| GGCCAGTGAATTCTCAATCA+AGG | 0.515296 | 4_1:-64292516 | Msa0563820:CDS |
| CAGGTGTGGTTACCAAGTTA+AGG | 0.515753 | 4_1:-64292187 | Msa0563820:CDS |
| CTAAAGAAAGACGGACTAAG+AGG | 0.516133 | 4_1:-64290730 | Msa0563820:CDS |
| GTAACCACACCTGCATCTCT+TGG | 0.516366 | 4_1:+64292197 | None:intergenic |
| TCAGTCGTGCCAAGAGATGC+AGG | 0.516688 | 4_1:-64292206 | Msa0563820:CDS |
| GCATCAAAGTATATCCCAAA+AGG | 0.517964 | 4_1:-64290769 | Msa0563820:CDS |
| AAAAGTGTCGATGCCTGCTA+TGG | 0.521373 | 4_1:+64290810 | None:intergenic |
| GGAGTATGGCCAAGATGTAT+TGG | 0.522951 | 4_1:-64289200 | Msa0563820:CDS |
| AGTTCTCTTTCAAGGTTGCA+TGG | 0.523607 | 4_1:-64292308 | Msa0563820:CDS |
| GGTTTCATCACTCATGGTCA+TGG | 0.524958 | 4_1:-64292618 | Msa0563820:exon |
| AGCCACATACTGGCTATTGG+AGG | 0.525826 | 4_1:-64289037 | Msa0563820:CDS |
| AATAGCCAGTATGTGGCTAA+AGG | 0.528869 | 4_1:+64289042 | None:intergenic |
| TGGGAAGGTTTCATCACTCA+TGG | 0.535187 | 4_1:-64292624 | Msa0563820:exon |
| GTTACCAAGTTAAGGAAAGC+TGG | 0.537797 | 4_1:-64292179 | Msa0563820:CDS |
| CCACTGAGTTAAGGCCTGAA+GGG | 0.544901 | 4_1:+64291135 | None:intergenic |
| ATAAAGCTGACCAAGAAAGA+AGG | 0.545569 | 4_1:-64292343 | Msa0563820:CDS |
| GATAGATTGAACACTACTGC+TGG | 0.550587 | 4_1:-64292248 | Msa0563820:CDS |
| GAAAGATTTAGTAGCTTCAC+CGG | 0.550684 | 4_1:-64289382 | Msa0563820:CDS |
| TTCAAAGCAATAGATTCACT+TGG | 0.552004 | 4_1:+64289438 | None:intergenic |
| GATCCTTGTGGTTCAAGTAG+TGG | 0.552399 | 4_1:-64291230 | Msa0563820:CDS |
| TGTGTTCTTGAAACCATAGC+AGG | 0.553334 | 4_1:-64290823 | Msa0563820:CDS |
| AGCCCAAGGCAAGACACAGT+TGG | 0.555092 | 4_1:-64291059 | Msa0563820:CDS |
| GTTGGTCTCACTAGTAGAGC+AGG | 0.557670 | 4_1:-64291095 | Msa0563820:CDS |
| TGCTAGAGGTGGACAAGGAA+AGG | 0.563245 | 4_1:-64292081 | Msa0563820:intron |
| TCAGGCCTTAACTCAGTGGT+GGG | 0.564541 | 4_1:-64291131 | Msa0563820:CDS |
| GTTGAAATTATCAGGCAAAG+AGG | 0.565242 | 4_1:-64289516 | Msa0563820:intron |
| ACCACTGAGTTAAGGCCTGA+AGG | 0.569080 | 4_1:+64291134 | None:intergenic |
| TAAAGCTGACCAAGAAAGAA+GGG | 0.569715 | 4_1:-64292342 | Msa0563820:CDS |
| GCTCAATTTCTAAAGAAAGA+CGG | 0.585283 | 4_1:-64290739 | Msa0563820:CDS |
| CCCTTCAGGCCTTAACTCAG+TGG | 0.586720 | 4_1:-64291135 | Msa0563820:CDS |
| TTTCAGTGTAGATATTGGGA+AGG | 0.587585 | 4_1:-64292639 | Msa0563820:five_prime_UTR |
| AACCTCCAATAGCCAGTATG+TGG | 0.588183 | 4_1:+64289035 | None:intergenic |
| CCTGCTGGAACACTCACTCC+AGG | 0.588550 | 4_1:+64289010 | None:intergenic |
| CCTCTAGCATTCCAACCACC+AGG | 0.589318 | 4_1:+64292095 | None:intergenic |
| GTTCCAGCAGGATATGAAAA+GGG | 0.591011 | 4_1:-64288998 | Msa0563820:CDS |
| CATTATTGAATATGTCAAGA+TGG | 0.595401 | 4_1:-64289132 | Msa0563820:CDS |
| ACATCTGCCAAACTGTTCAC+CGG | 0.595656 | 4_1:+64289363 | None:intergenic |
| GAAAGGCCACTTTGAGTGAG+TGG | 0.597972 | 4_1:-64292142 | Msa0563820:CDS |
| ATGTGACCACTCACTCAAAG+TGG | 0.600148 | 4_1:+64292136 | None:intergenic |
| TTGTGGTTCAAGTAGTGGAT+CGG | 0.605165 | 4_1:-64291225 | Msa0563820:CDS |
| CCTGGAGTGAGTGTTCCAGC+AGG | 0.610841 | 4_1:-64289010 | Msa0563820:CDS |
| TGGTGCTATCATATTAGGAA+AGG | 0.612275 | 4_1:-64292159 | Msa0563820:CDS |
| AGTTCTAAAAGGCATCTTGG+AGG | 0.616330 | 4_1:-64292393 | Msa0563820:CDS |
| ATTTCCAACTTCCTAAGGGG+AGG | 0.618968 | 4_1:+64288875 | None:intergenic |
| CGTGCCAAGAGATGCAGGTG+TGG | 0.627217 | 4_1:-64292201 | Msa0563820:CDS |
| AGGGCATAAAATGGAGCCAT+CGG | 0.628207 | 4_1:+64291154 | None:intergenic |
| GTGCAAGCTGAAAAGACGAA+CGG | 0.628607 | 4_1:-64289178 | Msa0563820:CDS |
| GTAATTTCCAACTTCCTAAG+GGG | 0.629814 | 4_1:+64288872 | None:intergenic |
| TCAAAGTATATCCCAAAAGG+TGG | 0.630247 | 4_1:-64290766 | Msa0563820:CDS |
| CTACTAGTGAGACCAACTGT+TGG | 0.631026 | 4_1:+64291101 | None:intergenic |
| CCTGGTGGTTGGAATGCTAG+AGG | 0.631226 | 4_1:-64292095 | Msa0563820:CDS |
| GTGGGCCTTAAACCAACAGT+TGG | 0.632543 | 4_1:-64291113 | Msa0563820:CDS |
| TGGAATGCTAGAGGTGGACA+AGG | 0.642036 | 4_1:-64292086 | Msa0563820:CDS |
| GTGTAGTTCCAATTAGCCCA+AGG | 0.651600 | 4_1:-64291073 | Msa0563820:CDS |
| TACACATTGGATGATCCTTG+TGG | 0.659008 | 4_1:-64291242 | Msa0563820:CDS |
| TGTGCAGAATCCATACACAT+TGG | 0.673696 | 4_1:-64291255 | Msa0563820:intron |
| AATCTGGTTACTGTGTCACT+TGG | 0.676515 | 4_1:-64291185 | Msa0563820:CDS |
| GGTGGTTGGAATGCTAGAGG+TGG | 0.689775 | 4_1:-64292092 | Msa0563820:CDS |
| AGGTCTAGTAAAGTTCCTGG+TGG | 0.700262 | 4_1:-64292110 | Msa0563820:CDS |
| TCACTTGGTACTGAAACCGA+TGG | 0.716676 | 4_1:-64291170 | Msa0563820:CDS |
| GATCCACTACTTGAACCACA+AGG | 0.767744 | 4_1:+64291227 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAGGTATAATTGATTTT+GGG | - | chr4_1:64289861-64289880 | Msa0563820:intron | 15.0% |
| !!! | AGTAAATAATTTTTTTTTCG+AGG | - | chr4_1:64290100-64290119 | Msa0563820:intron | 15.0% |
| !! | AGTTTAATGTAAATGTAAAT+AGG | + | chr4_1:64291598-64291617 | None:intergenic | 15.0% |
| !! | AATATTTCAGTGTAGATATT+GGG | - | chr4_1:64288828-64288847 | Msa0563820:exon | 20.0% |
| !! | TTATAGTTTACTACTTATTC+TGG | - | chr4_1:64289532-64289551 | Msa0563820:intron | 20.0% |
| !! | TGATTTACAATTAGGTAAAT+TGG | + | chr4_1:64289592-64289611 | None:intergenic | 20.0% |
| !!! | TTCTTTGTTGATTTACAATT+AGG | + | chr4_1:64289600-64289619 | None:intergenic | 20.0% |
| !!! | CAAAACTGATTTTTTGAAAT+CGG | - | chr4_1:64289676-64289695 | Msa0563820:intron | 20.0% |
| !!! | CTTTTAGGTATAATTGATTT+TGG | - | chr4_1:64289860-64289879 | Msa0563820:intron | 20.0% |
| !! | GACATAAAAAATGAGTAAAT+AGG | + | chr4_1:64290543-64290562 | None:intergenic | 20.0% |
| !! | TAGTAATTGTGTAACATTAA+TGG | - | chr4_1:64290579-64290598 | Msa0563820:intron | 20.0% |
| !!! | TCATTGTCTATTATTTTCTT+TGG | - | chr4_1:64290978-64290997 | Msa0563820:intron | 20.0% |
| !! | TGTAGTATAAATATCACATT+TGG | - | chr4_1:64291395-64291414 | Msa0563820:intron | 20.0% |
| !! | AATTAAAACTGTCCAAAATT+TGG | - | chr4_1:64291495-64291514 | Msa0563820:intron | 20.0% |
| !! | ATTAAAACTGTCCAAAATTT+GGG | - | chr4_1:64291496-64291515 | Msa0563820:intron | 20.0% |
| !! | ACATTTACATTAAACTATGT+TGG | - | chr4_1:64291602-64291621 | Msa0563820:intron | 20.0% |
| !!! | TATAGTAGAAAGTATAAGAA+GGG | - | chr4_1:64291673-64291692 | Msa0563820:intron | 20.0% |
| !! | AACAATGTTATCAATTGATA+GGG | + | chr4_1:64291938-64291957 | None:intergenic | 20.0% |
| !! | ATAACATTGTTGAAATTATC+AGG | - | chr4_1:64291947-64291966 | Msa0563820:intron | 20.0% |
| !! | GAATTGTTGTATAAAATTGT+AGG | - | chr4_1:64292241-64292260 | Msa0563820:CDS | 20.0% |
| !! | TATAAAATTGTAGGAGAAAA+TGG | - | chr4_1:64292250-64292269 | Msa0563820:CDS | 20.0% |
| ! | ATGTAACTAGTATAAGGAAT+TGG | + | chr4_1:64288904-64288923 | None:intergenic | 25.0% |
| !!! | TTTGTATTTTGATTTGGTTG+AGG | + | chr4_1:64289054-64289073 | None:intergenic | 25.0% |
| !! | CTACTTACTTAATTTGAGTT+TGG | - | chr4_1:64289423-64289442 | Msa0563820:CDS | 25.0% |
| !! | CAATTTTTGTCTGTATAGTT+TGG | - | chr4_1:64289764-64289783 | Msa0563820:intron | 25.0% |
| ! | ATGTCAATAAGTTTGAGAAT+TGG | - | chr4_1:64289806-64289825 | Msa0563820:intron | 25.0% |
| !!! | AAGCTAGAAATTTAGCTTTT+AGG | - | chr4_1:64289845-64289864 | Msa0563820:intron | 25.0% |
| ! | AACGTGATTTGACTATAAAT+TGG | + | chr4_1:64289922-64289941 | None:intergenic | 25.0% |
| !! | TGAGGCATTATTAGAAAAAT+AGG | - | chr4_1:64290066-64290085 | Msa0563820:intron | 25.0% |
| ! | GATAATCAAGTCATTTCTTT+AGG | + | chr4_1:64290126-64290145 | None:intergenic | 25.0% |
| ! | TAAAGTTCCAATAAGAAGAA+GGG | + | chr4_1:64290149-64290168 | None:intergenic | 25.0% |
| ! | ATGAATGATTCTTGAAAATG+AGG | - | chr4_1:64290171-64290190 | Msa0563820:intron | 25.0% |
| !! | TTACCATTTTGCAAATTCAA+TGG | - | chr4_1:64290477-64290496 | Msa0563820:intron | 25.0% |
| !! | GTAATTACCTTAACGTTTTT+AGG | + | chr4_1:64290842-64290861 | None:intergenic | 25.0% |
| ! | AATACTAATCTATGTGTATG+AGG | + | chr4_1:64290904-64290923 | None:intergenic | 25.0% |
| ! | TGATTTCTCCTATATAATTG+TGG | + | chr4_1:64291004-64291023 | None:intergenic | 25.0% |
| ! | TAATAATAAACAACTCCCAA+AGG | + | chr4_1:64291063-64291082 | None:intergenic | 25.0% |
| ! | TGGGAGTTGTTTATTATTAT+CGG | - | chr4_1:64291064-64291083 | Msa0563820:CDS | 25.0% |
| ! | ATGCTAATAATAACATGTCT+TGG | - | chr4_1:64291170-64291189 | Msa0563820:CDS | 25.0% |
| !!! | TCATATTTTTTGACAAACCA+CGG | - | chr4_1:64291316-64291335 | Msa0563820:intron | 25.0% |
| !!! | TCATGTGTTGATAACTTAAT+CGG | - | chr4_1:64291451-64291470 | Msa0563820:intron | 25.0% |
| ! | TTAAAACTGTCCAAAATTTG+GGG | - | chr4_1:64291497-64291516 | Msa0563820:intron | 25.0% |
| ! | GAATTTGAAGATTGATGTTA+AGG | - | chr4_1:64291624-64291643 | Msa0563820:intron | 25.0% |
| !! | GTATAGTAGAAAGTATAAGA+AGG | - | chr4_1:64291672-64291691 | Msa0563820:intron | 25.0% |
| ! | TTTAGTTAGTTAGAAATCAG+AGG | - | chr4_1:64291757-64291776 | Msa0563820:intron | 25.0% |
| ! | CAACAATGTTATCAATTGAT+AGG | + | chr4_1:64291939-64291958 | None:intergenic | 25.0% |
| ! | CATTATTGAATATGTCAAGA+TGG | - | chr4_1:64292339-64292358 | Msa0563820:CDS | 25.0% |
| ! | TAAGCAATTTCAATCAACTT+TGG | + | chr4_1:64292542-64292561 | None:intergenic | 25.0% |
| ! | GTTGGAAATTACAAATAAGA+TGG | - | chr4_1:64292610-64292629 | Msa0563820:exon | 25.0% |
| AGGAGAATGTAACTAGTATA+AGG | + | chr4_1:64288910-64288929 | None:intergenic | 30.0% | |
| ! | TTGATGTTAATTGGTTTCTC+TGG | + | chr4_1:64289012-64289031 | None:intergenic | 30.0% |
| CAAGTTGTCTTGATGTTAAT+TGG | + | chr4_1:64289021-64289040 | None:intergenic | 30.0% | |
| !!! | CTGGGTTTTGTATTTTGATT+TGG | + | chr4_1:64289060-64289079 | None:intergenic | 30.0% |
| !! | ATACAAAACCCAGTTCTAAA+AGG | - | chr4_1:64289067-64289086 | Msa0563820:CDS | 30.0% |
| !!! | TGGAATACCTATTTTGGTTA+AGG | - | chr4_1:64289183-64289202 | Msa0563820:CDS | 30.0% |
| GTGTTATCCTTAACCAAAAT+AGG | + | chr4_1:64289193-64289212 | None:intergenic | 30.0% | |
| ! | AAAAAATCAGTTTTGCCGAA+CGG | + | chr4_1:64289671-64289690 | None:intergenic | 30.0% |
| !!! | AGCTAAATTTCTAGCTTTTG+CGG | + | chr4_1:64289842-64289861 | None:intergenic | 30.0% |
| TGACTATAAATTGGTGTGTT+TGG | + | chr4_1:64289913-64289932 | None:intergenic | 30.0% | |
| ! | ACAAATTTGGAATCAAACGT+AGG | - | chr4_1:64289971-64289990 | Msa0563820:intron | 30.0% |
| AAAGTTCCAATAAGAAGAAG+GGG | + | chr4_1:64290148-64290167 | None:intergenic | 30.0% | |
| CTAAAGTTCCAATAAGAAGA+AGG | + | chr4_1:64290150-64290169 | None:intergenic | 30.0% | |
| ATTTGCAAAATGGTAACAGT+GGG | + | chr4_1:64290473-64290492 | None:intergenic | 30.0% | |
| AATTTGCAAAATGGTAACAG+TGG | + | chr4_1:64290474-64290493 | None:intergenic | 30.0% | |
| AGTCCATTGAATTTGCAAAA+TGG | + | chr4_1:64290483-64290502 | None:intergenic | 30.0% | |
| ATTGTGTAACATTAATGGTG+TGG | - | chr4_1:64290584-64290603 | Msa0563820:intron | 30.0% | |
| !!! | TTAATGGTGTGGTTTTTTAC+AGG | - | chr4_1:64290595-64290614 | Msa0563820:intron | 30.0% |
| !!! | TTTTTTACAGGCCAATTTGT+AGG | - | chr4_1:64290607-64290626 | Msa0563820:intron | 30.0% |
| ! | GCTCAATTTCTAAAGAAAGA+CGG | - | chr4_1:64290732-64290751 | Msa0563820:CDS | 30.0% |
| TTCTTTGGCCACAATTATAT+AGG | - | chr4_1:64290993-64291012 | Msa0563820:intron | 30.0% | |
| !!! | TTGGACAGTTTTAATTGTGT+TGG | + | chr4_1:64291491-64291510 | None:intergenic | 30.0% |
| ! | TCTTGTAACTACTTCTTTTC+AGG | + | chr4_1:64291562-64291581 | None:intergenic | 30.0% |
| ! | ATGTAAATAGGTCTGAAGTA+TGG | + | chr4_1:64291586-64291605 | None:intergenic | 30.0% |
| TTCAAAGCAATAGATTCACT+TGG | + | chr4_1:64292036-64292055 | None:intergenic | 30.0% | |
| !!! | ATTTGTTTTGGAGGTTTGAA+AGG | - | chr4_1:64292509-64292528 | Msa0563820:CDS | 30.0% |
| !!! | TTTGTTTTGGAGGTTTGAAA+GGG | - | chr4_1:64292510-64292529 | Msa0563820:CDS | 30.0% |
| TGTAATTTCCAACTTCCTAA+GGG | + | chr4_1:64292603-64292622 | None:intergenic | 30.0% | |
| TTGTAATTTCCAACTTCCTA+AGG | + | chr4_1:64292604-64292623 | None:intergenic | 30.0% | |
| TTTCAGTGTAGATATTGGGA+AGG | - | chr4_1:64288832-64288851 | Msa0563820:exon | 35.0% | |
| TTCCTTGATTGAGAATTCAC+TGG | + | chr4_1:64288960-64288979 | None:intergenic | 35.0% | |
| ATAAAGCTGACCAAGAAAGA+AGG | - | chr4_1:64289128-64289147 | Msa0563820:CDS | 35.0% | |
| TAAAGCTGACCAAGAAAGAA+GGG | - | chr4_1:64289129-64289148 | Msa0563820:CDS | 35.0% | |
| !!! | GTGTTTTTTCCCTTCTTTCT+TGG | + | chr4_1:64289141-64289160 | None:intergenic | 35.0% |
| AAACACCAAGTTCTCTTTCA+AGG | - | chr4_1:64289155-64289174 | Msa0563820:CDS | 35.0% | |
| ! | GTTGCATGGAATACCTATTT+TGG | - | chr4_1:64289177-64289196 | Msa0563820:CDS | 35.0% |
| TAAGGATAACACTGCAACTA+AGG | - | chr4_1:64289201-64289220 | Msa0563820:CDS | 35.0% | |
| !! | AAAGCTGGTGCTATCATATT+AGG | - | chr4_1:64289307-64289326 | Msa0563820:intron | 35.0% |
| !! | TGGTGCTATCATATTAGGAA+AGG | - | chr4_1:64289312-64289331 | Msa0563820:intron | 35.0% |
| TTCTGGACTTCTTGTACATT+TGG | - | chr4_1:64289549-64289568 | Msa0563820:intron | 35.0% | |
| ! | CTTAGCCTTTACTCAATCTT+AGG | + | chr4_1:64289645-64289664 | None:intergenic | 35.0% |
| AATAACCCAAACTCGATTCT+GGG | - | chr4_1:64289944-64289963 | Msa0563820:intron | 35.0% | |
| CTCATAAGTTAGCGAAAAAG+GGG | + | chr4_1:64290050-64290069 | None:intergenic | 35.0% | |
| CCTCATAAGTTAGCGAAAAA+GGG | + | chr4_1:64290051-64290070 | None:intergenic | 35.0% | |
| GATTATCCCCTTCTTCTTAT+TGG | - | chr4_1:64290139-64290158 | Msa0563820:intron | 35.0% | |
| AATATCAGTAGCAGCAAATC+TGG | - | chr4_1:64290270-64290289 | Msa0563820:intron | 35.0% | |
| TCTGATACAGTCCTACAAAT+TGG | + | chr4_1:64290621-64290640 | None:intergenic | 35.0% | |
| GCATCAAAGTATATCCCAAA+AGG | - | chr4_1:64290702-64290721 | Msa0563820:CDS | 35.0% | |
| TCAAAGTATATCCCAAAAGG+TGG | - | chr4_1:64290705-64290724 | Msa0563820:CDS | 35.0% | |
| ACTCACACCTAAAAACGTTA+AGG | - | chr4_1:64290832-64290851 | Msa0563820:CDS | 35.0% | |
| ! | TTTAAAACCTGTGCAACACA+TGG | - | chr4_1:64290922-64290941 | Msa0563820:intron | 35.0% |
| ATGCCTATAGACAATCCTTT+GGG | - | chr4_1:64291045-64291064 | Msa0563820:intron | 35.0% | |
| ! | TATACCAAACGTCAAGTTGT+TGG | + | chr4_1:64291090-64291109 | None:intergenic | 35.0% |
| TGTTAACGTATCTACTCTAC+TGG | + | chr4_1:64291246-64291265 | None:intergenic | 35.0% | |
| CGTTAACAATGTAAACCTGT+CGG | - | chr4_1:64291258-64291277 | Msa0563820:intron | 35.0% | |
| ! | ATGAACCTGATGACAGTTTT+TGG | - | chr4_1:64291290-64291309 | Msa0563820:intron | 35.0% |
| GATTACCAAAAACTGTCATC+AGG | + | chr4_1:64291298-64291317 | None:intergenic | 35.0% | |
| GATAACTTAATCGGAAGAGT+AGG | - | chr4_1:64291460-64291479 | Msa0563820:intron | 35.0% | |
| ! | TAGAAAGTATAAGAAGGGTG+TGG | - | chr4_1:64291678-64291697 | Msa0563820:intron | 35.0% |
| AATTGATAGGGTTGTTCACT+GGG | + | chr4_1:64291926-64291945 | None:intergenic | 35.0% | |
| GTTGAAATTATCAGGCAAAG+AGG | - | chr4_1:64291955-64291974 | Msa0563820:intron | 35.0% | |
| GTGAAGCTACTAAATCTTTC+AGG | + | chr4_1:64292089-64292108 | None:intergenic | 35.0% | |
| GAAAGATTTAGTAGCTTCAC+CGG | - | chr4_1:64292089-64292108 | Msa0563820:CDS | 35.0% | |
| !! | TTTTGGGTGTTTCTCATTGA+AGG | + | chr4_1:64292139-64292158 | None:intergenic | 35.0% |
| CAATGAGAAACACCCAAAAT+TGG | - | chr4_1:64292140-64292159 | Msa0563820:CDS | 35.0% | |
| ! | CACATATACCGACCAATTTT+GGG | + | chr4_1:64292155-64292174 | None:intergenic | 35.0% |
| ! | ACACATATACCGACCAATTT+TGG | + | chr4_1:64292156-64292175 | None:intergenic | 35.0% |
| TTGTAGGAGAAAATGGAGTA+TGG | - | chr4_1:64292257-64292276 | Msa0563820:CDS | 35.0% | |
| ATGTCAAGATGGTCAGAAAA+TGG | - | chr4_1:64292350-64292369 | Msa0563820:CDS | 35.0% | |
| TGTCAAGATGGTCAGAAAAT+GGG | - | chr4_1:64292351-64292370 | Msa0563820:CDS | 35.0% | |
| !! | GAGCCATTTGGAATTTGTTT+TGG | - | chr4_1:64292497-64292516 | Msa0563820:CDS | 35.0% |
| CCTCCAAAACAAATTCCAAA+TGG | + | chr4_1:64292503-64292522 | None:intergenic | 35.0% | |
| !!! | CCATTTGGAATTTGTTTTGG+AGG | - | chr4_1:64292500-64292519 | Msa0563820:CDS | 35.0% |
| GTAATTTCCAACTTCCTAAG+GGG | + | chr4_1:64292602-64292621 | None:intergenic | 35.0% | |
| !! | TTTTGGTAGCAGTAGCATAG+AGG | + | chr4_1:64288930-64288949 | None:intergenic | 40.0% |
| ! | AATTCACTGGCCAAGGTTTT+TGG | + | chr4_1:64288947-64288966 | None:intergenic | 40.0% |
| !!! | CCAAGATGCCTTTTAGAACT+GGG | + | chr4_1:64289078-64289097 | None:intergenic | 40.0% |
| !!! | TCCAAGATGCCTTTTAGAAC+TGG | + | chr4_1:64289079-64289098 | None:intergenic | 40.0% |
| !! | AGTTCTAAAAGGCATCTTGG+AGG | - | chr4_1:64289078-64289097 | Msa0563820:CDS | 40.0% |
| TGCAACCTTGAAAGAGAACT+TGG | + | chr4_1:64289163-64289182 | None:intergenic | 40.0% | |
| AGTTCTCTTTCAAGGTTGCA+TGG | - | chr4_1:64289163-64289182 | Msa0563820:CDS | 40.0% | |
| GATAGATTGAACACTACTGC+TGG | - | chr4_1:64289223-64289242 | Msa0563820:intron | 40.0% | |
| GTTACCAAGTTAAGGAAAGC+TGG | - | chr4_1:64289292-64289311 | Msa0563820:intron | 40.0% | |
| TACAGGTCTAGTAAAGTTCC+TGG | - | chr4_1:64289358-64289377 | Msa0563820:CDS | 40.0% | |
| AAACTCAGAAGAGCTAGTCA+AGG | + | chr4_1:64289512-64289531 | None:intergenic | 40.0% | |
| GCTTGCCTAAGATTGAGTAA+AGG | - | chr4_1:64289637-64289656 | Msa0563820:intron | 40.0% | |
| GAATAACCCAAACTCGATTC+TGG | - | chr4_1:64289943-64289962 | Msa0563820:intron | 40.0% | |
| ! | GATTCTGGGAGGTACAAATT+TGG | - | chr4_1:64289958-64289977 | Msa0563820:intron | 40.0% |
| CATGGCTCTTCATTTAACAC+AGG | + | chr4_1:64290019-64290038 | None:intergenic | 40.0% | |
| CTGTGTTAAATGAAGAGCCA+TGG | - | chr4_1:64290017-64290036 | Msa0563820:intron | 40.0% | |
| !! | CCCTTTTTCGCTAACTTATG+AGG | - | chr4_1:64290048-64290067 | Msa0563820:intron | 40.0% |
| GCCTCATAAGTTAGCGAAAA+AGG | + | chr4_1:64290052-64290071 | None:intergenic | 40.0% | |
| TGTGCAGAATCCATACACAT+TGG | - | chr4_1:64290216-64290235 | Msa0563820:intron | 40.0% | |
| CAAGGATCATCCAATGTGTA+TGG | + | chr4_1:64290229-64290248 | None:intergenic | 40.0% | |
| TACACATTGGATGATCCTTG+TGG | - | chr4_1:64290229-64290248 | Msa0563820:intron | 40.0% | |
| !! | TTGTGGTTCAAGTAGTGGAT+CGG | - | chr4_1:64290246-64290265 | Msa0563820:intron | 40.0% |
| ! | AATCTGGTTACTGTGTCACT+TGG | - | chr4_1:64290286-64290305 | Msa0563820:intron | 40.0% |
| !! | TGAGACCAACTGTTGGTTTA+AGG | + | chr4_1:64290366-64290385 | None:intergenic | 40.0% |
| GACCGACAGTTACAATTTCA+CGG | - | chr4_1:64290508-64290527 | Msa0563820:intron | 40.0% | |
| GTCCGTGAAATTGTAACTGT+CGG | + | chr4_1:64290513-64290532 | None:intergenic | 40.0% | |
| TGTGTTCTTGAAACCATAGC+AGG | - | chr4_1:64290648-64290667 | Msa0563820:CDS | 40.0% | |
| !!! | AGGCATCGACACTTTTGATA+AGG | - | chr4_1:64290668-64290687 | Msa0563820:CDS | 40.0% |
| ! | ATTGAGCATAGCCACCTTTT+GGG | + | chr4_1:64290719-64290738 | None:intergenic | 40.0% |
| ! | AATTGAGCATAGCCACCTTT+TGG | + | chr4_1:64290720-64290739 | None:intergenic | 40.0% |
| !! | CTAAAGAAAGACGGACTAAG+AGG | - | chr4_1:64290741-64290760 | Msa0563820:CDS | 40.0% |
| GGACTAAGAGGAAAGAGATT+AGG | - | chr4_1:64290753-64290772 | Msa0563820:CDS | 40.0% | |
| TATCTAACCATGTGTTGCAC+AGG | + | chr4_1:64290932-64290951 | None:intergenic | 40.0% | |
| GATGCCTATAGACAATCCTT+TGG | - | chr4_1:64291044-64291063 | Msa0563820:intron | 40.0% | |
| ACTCCCAAAGGATTGTCTAT+AGG | + | chr4_1:64291051-64291070 | None:intergenic | 40.0% | |
| TCATTTAACATGATCAGCCG+TGG | + | chr4_1:64291336-64291355 | None:intergenic | 40.0% | |
| ACTGTCCAAAATTTGGGGAA+TGG | - | chr4_1:64291502-64291521 | Msa0563820:intron | 40.0% | |
| ! | TGTCACCATTCCCCAAATTT+TGG | + | chr4_1:64291510-64291529 | None:intergenic | 40.0% |
| !! | TACTTCTTTTCAGGAGCGAT+AGG | + | chr4_1:64291553-64291572 | None:intergenic | 40.0% |
| CTACTATACGCCTGCTTAAT+GGG | + | chr4_1:64291661-64291680 | None:intergenic | 40.0% | |
| TCTACTATACGCCTGCTTAA+TGG | + | chr4_1:64291662-64291681 | None:intergenic | 40.0% | |
| ! | AAAGTATAAGAAGGGTGTGG+AGG | - | chr4_1:64291681-64291700 | Msa0563820:intron | 40.0% |
| CAATTGATAGGGTTGTTCAC+TGG | + | chr4_1:64291927-64291946 | None:intergenic | 40.0% | |
| GAGAAACACCCAAAATTGGT+CGG | - | chr4_1:64292144-64292163 | Msa0563820:CDS | 40.0% | |
| ! | CTGAAAAGACGAACGGTTTT+GGG | - | chr4_1:64292300-64292319 | Msa0563820:CDS | 40.0% |
| ! | ATGCTGTAGTGACACCTTTT+TGG | - | chr4_1:64292405-64292424 | Msa0563820:CDS | 40.0% |
| ATGTGGCTAAAGGACCAAAA+AGG | + | chr4_1:64292422-64292441 | None:intergenic | 40.0% | |
| AATAGCCAGTATGTGGCTAA+AGG | + | chr4_1:64292432-64292451 | None:intergenic | 40.0% | |
| ! | TTTAGCCACATACTGGCTAT+TGG | - | chr4_1:64292431-64292450 | Msa0563820:CDS | 40.0% |
| TGTTCCAGCAGGATATGAAA+AGG | - | chr4_1:64292472-64292491 | Msa0563820:CDS | 40.0% | |
| GTTCCAGCAGGATATGAAAA+GGG | - | chr4_1:64292473-64292492 | Msa0563820:CDS | 40.0% | |
| TATGAAAAGGGTGAGCCATT+TGG | - | chr4_1:64292485-64292504 | Msa0563820:CDS | 40.0% | |
| TGGGAAGGTTTCATCACTCA+TGG | - | chr4_1:64288847-64288866 | Msa0563820:CDS | 45.0% | |
| GGTTTCATCACTCATGGTCA+TGG | - | chr4_1:64288853-64288872 | Msa0563820:CDS | 45.0% | |
| GCTACTGCTACCAAAAACCT+TGG | - | chr4_1:64288934-64288953 | Msa0563820:CDS | 45.0% | |
| GATTGAGAATTCACTGGCCA+AGG | + | chr4_1:64288954-64288973 | None:intergenic | 45.0% | |
| GGCCAGTGAATTCTCAATCA+AGG | - | chr4_1:64288955-64288974 | Msa0563820:CDS | 45.0% | |
| !! | CCCAGTTCTAAAAGGCATCT+TGG | - | chr4_1:64289075-64289094 | Msa0563820:CDS | 45.0% |
| TCTGCTTGTGCTAATGCATC+TGG | + | chr4_1:64289109-64289128 | None:intergenic | 45.0% | |
| CAGGTGTGGTTACCAAGTTA+AGG | - | chr4_1:64289284-64289303 | Msa0563820:intron | 45.0% | |
| AGCACCAGCTTTCCTTAACT+TGG | + | chr4_1:64289299-64289318 | None:intergenic | 45.0% | |
| ATGTGACCACTCACTCAAAG+TGG | + | chr4_1:64289338-64289357 | None:intergenic | 45.0% | |
| TGAGTGAGTGGTCACATTAC+AGG | - | chr4_1:64289341-64289360 | Msa0563820:CDS | 45.0% | |
| AGGTCTAGTAAAGTTCCTGG+TGG | - | chr4_1:64289361-64289380 | Msa0563820:CDS | 45.0% | |
| CTAGTAAAGTTCCTGGTGGT+TGG | - | chr4_1:64289365-64289384 | Msa0563820:CDS | 45.0% | |
| GTAAAGGCTAAGTGTCCGTT+CGG | - | chr4_1:64289653-64289672 | Msa0563820:intron | 45.0% | |
| TACCTCCCAGAATCGAGTTT+GGG | + | chr4_1:64289952-64289971 | None:intergenic | 45.0% | |
| GATCCTTGTGGTTCAAGTAG+TGG | - | chr4_1:64290241-64290260 | Msa0563820:intron | 45.0% | |
| GATCCACTACTTGAACCACA+AGG | + | chr4_1:64290247-64290266 | None:intergenic | 45.0% | |
| ! | TCACTTGGTACTGAAACCGA+TGG | - | chr4_1:64290301-64290320 | Msa0563820:intron | 45.0% |
| AGGGCATAAAATGGAGCCAT+CGG | + | chr4_1:64290320-64290339 | None:intergenic | 45.0% | |
| ! | AAGGCCTGAAGGGCATAAAA+TGG | + | chr4_1:64290329-64290348 | None:intergenic | 45.0% |
| CTACTAGTGAGACCAACTGT+TGG | + | chr4_1:64290373-64290392 | None:intergenic | 45.0% | |
| GTGTAGTTCCAATTAGCCCA+AGG | - | chr4_1:64290398-64290417 | Msa0563820:intron | 45.0% | |
| !! | AAAAGTGTCGATGCCTGCTA+TGG | + | chr4_1:64290664-64290683 | None:intergenic | 45.0% |
| GTGAGAGACTACTACGAGTT+TGG | - | chr4_1:64290780-64290799 | Msa0563820:CDS | 45.0% | |
| GTTCATTCAAGATTGCCGAC+AGG | + | chr4_1:64291276-64291295 | None:intergenic | 45.0% | |
| TGTGGAGGATGATACTCATG+TGG | - | chr4_1:64291696-64291715 | Msa0563820:intron | 45.0% | |
| TAGGGTTGTTCACTGGGAAT+GGG | + | chr4_1:64291920-64291939 | None:intergenic | 45.0% | |
| ATAGGGTTGTTCACTGGGAA+TGG | + | chr4_1:64291921-64291940 | None:intergenic | 45.0% | |
| ACATCTGCCAAACTGTTCAC+CGG | + | chr4_1:64292111-64292130 | None:intergenic | 45.0% | |
| GGAGTATGGCCAAGATGTAT+TGG | - | chr4_1:64292271-64292290 | Msa0563820:CDS | 45.0% | |
| CAGCTTGCACCAATACATCT+TGG | + | chr4_1:64292283-64292302 | None:intergenic | 45.0% | |
| GTGCAAGCTGAAAAGACGAA+CGG | - | chr4_1:64292293-64292312 | Msa0563820:CDS | 45.0% | |
| ! | GCTGAAAAGACGAACGGTTT+TGG | - | chr4_1:64292299-64292318 | Msa0563820:CDS | 45.0% |
| TTGGTCCTTTAGCCACATAC+TGG | - | chr4_1:64292424-64292443 | Msa0563820:CDS | 45.0% | |
| AACCTCCAATAGCCAGTATG+TGG | + | chr4_1:64292439-64292458 | None:intergenic | 45.0% | |
| ! | TCACCCTTTTCATATCCTGC+TGG | + | chr4_1:64292479-64292498 | None:intergenic | 45.0% |
| ATTTCCAACTTCCTAAGGGG+AGG | + | chr4_1:64292599-64292618 | None:intergenic | 45.0% | |
| !! | GCTGGCTCTTTTGCACTTCT+TGG | - | chr4_1:64289241-64289260 | Msa0563820:intron | 50.0% |
| GTAACCACACCTGCATCTCT+TGG | + | chr4_1:64289277-64289296 | None:intergenic | 50.0% | |
| ! | GAAAGGCCACTTTGAGTGAG+TGG | - | chr4_1:64289329-64289348 | Msa0563820:intron | 50.0% |
| TGGAATGCTAGAGGTGGACA+AGG | - | chr4_1:64289385-64289404 | Msa0563820:CDS | 50.0% | |
| TGCTAGAGGTGGACAAGGAA+AGG | - | chr4_1:64289390-64289409 | Msa0563820:CDS | 50.0% | |
| AACCCAAACTCGATTCTGGG+AGG | - | chr4_1:64289947-64289966 | Msa0563820:intron | 50.0% | |
| GTACCTCCCAGAATCGAGTT+TGG | + | chr4_1:64289953-64289972 | None:intergenic | 50.0% | |
| GAAAAAGGGGTCAGTCTCCA+TGG | + | chr4_1:64290037-64290056 | None:intergenic | 50.0% | |
| ! | GGCTCCATTTTATGCCCTTC+AGG | - | chr4_1:64290322-64290341 | Msa0563820:intron | 50.0% |
| CCACTGAGTTAAGGCCTGAA+GGG | + | chr4_1:64290339-64290358 | None:intergenic | 50.0% | |
| ACCACTGAGTTAAGGCCTGA+AGG | + | chr4_1:64290340-64290359 | None:intergenic | 50.0% | |
| TTCAGGCCTTAACTCAGTGG+TGG | - | chr4_1:64290339-64290358 | Msa0563820:intron | 50.0% | |
| TCAGGCCTTAACTCAGTGGT+GGG | - | chr4_1:64290340-64290359 | Msa0563820:intron | 50.0% | |
| TAAGGCCCACCACTGAGTTA+AGG | + | chr4_1:64290348-64290367 | None:intergenic | 50.0% | |
| GTGGGCCTTAAACCAACAGT+TGG | - | chr4_1:64290358-64290377 | Msa0563820:intron | 50.0% | |
| ! | GTTGGTCTCACTAGTAGAGC+AGG | - | chr4_1:64290376-64290395 | Msa0563820:intron | 50.0% |
| GTGTCTTGCCTTGGGCTAAT+TGG | + | chr4_1:64290409-64290428 | None:intergenic | 50.0% | |
| ACCCAACTGTGTCTTGCCTT+GGG | + | chr4_1:64290417-64290436 | None:intergenic | 50.0% | |
| TACCCAACTGTGTCTTGCCT+TGG | + | chr4_1:64290418-64290437 | None:intergenic | 50.0% | |
| TCGGCCAACAACTTGACGTT+TGG | - | chr4_1:64291083-64291102 | Msa0563820:CDS | 50.0% | |
| CTATACGCCTGCTTAATGGG+AGG | + | chr4_1:64291658-64291677 | None:intergenic | 50.0% | |
| !! | CAGGCAAAGAGGTGCAGTTT+TGG | - | chr4_1:64291966-64291985 | Msa0563820:intron | 50.0% |
| AGCTTCACCGGTGAACAGTT+TGG | - | chr4_1:64292101-64292120 | Msa0563820:CDS | 50.0% | |
| ! | AGCCACATACTGGCTATTGG+AGG | - | chr4_1:64292434-64292453 | Msa0563820:CDS | 50.0% |
| CTGGCTATTGGAGGTTATCC+TGG | - | chr4_1:64292443-64292462 | Msa0563820:CDS | 50.0% | |
| TCAGTCGTGCCAAGAGATGC+AGG | - | chr4_1:64289265-64289284 | Msa0563820:intron | 55.0% | |
| CCTCTAGCATTCCAACCACC+AGG | + | chr4_1:64289379-64289398 | None:intergenic | 55.0% | |
| CCTGGTGGTTGGAATGCTAG+AGG | - | chr4_1:64289376-64289395 | Msa0563820:CDS | 55.0% | |
| GGTGGTTGGAATGCTAGAGG+TGG | - | chr4_1:64289379-64289398 | Msa0563820:CDS | 55.0% | |
| CCCTTCAGGCCTTAACTCAG+TGG | - | chr4_1:64290336-64290355 | Msa0563820:intron | 55.0% | |
| AGCCCAAGGCAAGACACAGT+TGG | - | chr4_1:64290412-64290431 | Msa0563820:intron | 55.0% | |
| GCCCAAGGCAAGACACAGTT+GGG | - | chr4_1:64290413-64290432 | Msa0563820:intron | 55.0% | |
| CACAGTTGGGTAAGCACGCT+CGG | - | chr4_1:64290426-64290445 | Msa0563820:intron | 55.0% | |
| ACAGTTGGGTAAGCACGCTC+GGG | - | chr4_1:64290427-64290446 | Msa0563820:intron | 55.0% | |
| GCGAAGACCTCCCATTAAGC+AGG | - | chr4_1:64291648-64291667 | Msa0563820:intron | 55.0% | |
| TCAGAAAGCCACCTCCCCTT+AGG | - | chr4_1:64292585-64292604 | Msa0563820:CDS | 55.0% | |
| TCCAACTTCCTAAGGGGAGG+TGG | + | chr4_1:64292596-64292615 | None:intergenic | 55.0% | |
| CGTGCCAAGAGATGCAGGTG+TGG | - | chr4_1:64289270-64289289 | Msa0563820:intron | 60.0% | |
| CCTGCTGGAACACTCACTCC+AGG | + | chr4_1:64292464-64292483 | None:intergenic | 60.0% | |
| CCTGGAGTGAGTGTTCCAGC+AGG | - | chr4_1:64292461-64292480 | Msa0563820:CDS | 60.0% | |
| GCCACCTCCCCTTAGGAAGT+TGG | - | chr4_1:64292592-64292611 | Msa0563820:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_1 | gene | 64288828 | 64292665 | 64288828 | ID=Msa0563820;Name=Msa0563820 |
| chr4_1 | mRNA | 64288828 | 64292665 | 64288828 | ID=Msa0563820-mRNA-1;Parent=Msa0563820;Name=Msa0563820-mRNA-1;_AED=0.24;_eAED=0.24;_QI=38|1|1|1|1|1|5|13|525 |
| chr4_1 | exon | 64288828 | 64289230 | 64288828 | ID=Msa0563820-mRNA-1:exon:20553;Parent=Msa0563820-mRNA-1 |
| chr4_1 | exon | 64289332 | 64289524 | 64289332 | ID=Msa0563820-mRNA-1:exon:20552;Parent=Msa0563820-mRNA-1 |
| chr4_1 | exon | 64290640 | 64290876 | 64290640 | ID=Msa0563820-mRNA-1:exon:20551;Parent=Msa0563820-mRNA-1 |
| chr4_1 | exon | 64291059 | 64291270 | 64291059 | ID=Msa0563820-mRNA-1:exon:20550;Parent=Msa0563820-mRNA-1 |
| chr4_1 | exon | 64292082 | 64292665 | 64292082 | ID=Msa0563820-mRNA-1:exon:20549;Parent=Msa0563820-mRNA-1 |
| chr4_1 | five_prime_UTR | 64292628 | 64292665 | 64292628 | ID=Msa0563820-mRNA-1:five_prime_utr;Parent=Msa0563820-mRNA-1 |
| chr4_1 | CDS | 64292082 | 64292627 | 64292082 | ID=Msa0563820-mRNA-1:cds;Parent=Msa0563820-mRNA-1 |
| chr4_1 | CDS | 64291059 | 64291270 | 64291059 | ID=Msa0563820-mRNA-1:cds;Parent=Msa0563820-mRNA-1 |
| chr4_1 | CDS | 64290640 | 64290876 | 64290640 | ID=Msa0563820-mRNA-1:cds;Parent=Msa0563820-mRNA-1 |
| chr4_1 | CDS | 64289332 | 64289524 | 64289332 | ID=Msa0563820-mRNA-1:cds;Parent=Msa0563820-mRNA-1 |
| chr4_1 | CDS | 64288841 | 64289230 | 64288841 | ID=Msa0563820-mRNA-1:cds;Parent=Msa0563820-mRNA-1 |
| chr4_1 | three_prime_UTR | 64288828 | 64288840 | 64288828 | ID=Msa0563820-mRNA-1:three_prime_utr;Parent=Msa0563820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
