AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1144390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144390 MtrunA17_Chr4g0036001 97.941 874 17 1 1 873 1 874 0.0 1767
Msa1144390 MtrunA17_Chr5g0405181 60.759 553 151 9 1 493 1 547 0.0 633
Msa1144390 MtrunA17_Chr5g0405181 44.781 297 139 6 575 865 669 946 8.27e-66 238
Msa1144390 MtrunA17_Chr8g0372171 71.264 435 116 3 1 431 1 430 0.0 626
Msa1144390 MtrunA17_Chr8g0372171 36.864 236 113 8 548 765 813 1030 2.11e-27 119
Msa1144390 MtrunA17_Chr3g0142261 62.470 421 146 4 19 438 14 423 3.74e-166 523
Msa1144390 MtrunA17_Chr3g0142261 38.113 265 135 9 623 872 1270 1520 5.98e-43 169
Msa1144390 MtrunA17_Chr6g0483701 57.820 422 165 5 17 435 23 434 6.08e-148 461
Msa1144390 MtrunA17_Chr6g0483701 40.773 233 129 4 632 855 711 943 3.14e-45 176
Msa1144390 MtrunA17_Chr4g0070001 53.922 408 166 4 22 429 141 526 2.61e-130 416
Msa1144390 MtrunA17_Chr4g0070001 35.985 264 156 7 610 865 770 1028 7.79e-42 166
Msa1144390 MtrunA17_Chr1g0152231 38.964 444 244 9 23 454 2 430 8.75e-80 275
Msa1144390 MtrunA17_Chr1g0193221 43.169 366 185 6 23 376 2 356 1.29e-78 278
Msa1144390 MtrunA17_Chr7g0258991 39.480 423 227 10 21 425 70 481 7.99e-76 267
Msa1144390 MtrunA17_Chr3g0145071 37.931 435 245 8 3 425 80 501 9.59e-75 265
Msa1144390 MtrunA17_Chr4g0035661 37.590 415 236 7 23 425 88 491 6.41e-73 259
Msa1144390 MtrunA17_Chr1g0178411 33.628 452 259 8 11 431 5 446 1.10e-55 208
Msa1144390 MtrunA17_Chr2g0327581 33.092 414 244 6 10 399 40 444 1.19e-54 205
Msa1144390 MtrunA17_Chr7g0266631 33.178 428 251 6 25 421 10 433 8.92e-54 202
Msa1144390 MtrunA17_Chr1g0182151 31.195 452 278 9 22 445 52 498 2.15e-51 195
Msa1144390 MtrunA17_Chr3g0122121 36.815 383 195 12 25 373 99 468 3.47e-51 195
Msa1144390 MtrunA17_Chr2g0322291 33.810 420 230 9 3 382 60 471 6.12e-50 191
Msa1144390 MtrunA17_Chr3g0132921 30.886 463 247 11 70 492 47 476 9.44e-50 184
Msa1144390 MtrunA17_Chr8g0369881 32.979 376 227 8 2 365 853 1215 5.18e-49 188
Msa1144390 MtrunA17_Chr8g0377731 34.250 400 215 10 25 392 56 439 9.66e-49 187
Msa1144390 MtrunA17_Chr5g0427481 35.965 342 174 8 70 376 55 386 2.71e-47 183
Msa1144390 MtrunA17_Chr4g0053211 34.351 393 201 14 70 411 50 436 3.25e-47 182
Msa1144390 MtrunA17_Chr1g0195111 35.106 376 217 10 16 376 388 751 6.25e-47 181
Msa1144390 MtrunA17_Chr4g0045381 35.751 386 192 8 25 372 194 561 6.73e-47 182
Msa1144390 MtrunA17_Chr4g0062291 34.758 351 202 8 18 350 117 458 4.41e-46 176
Msa1144390 MtrunA17_Chr5g0407791 32.461 382 234 9 7 375 872 1242 1.08e-45 178
Msa1144390 MtrunA17_Chr2g0307481 35.088 342 202 8 22 350 66 400 1.20e-44 171
Msa1144390 MtrunA17_Chr4g0069141 36.053 380 200 12 25 376 154 518 1.22e-44 175
Msa1144390 MtrunA17_Chr1g0192481 33.747 403 229 14 12 389 49 438 2.18e-44 169
Msa1144390 MtrunA17_Chr1g0153061 33.422 377 207 10 70 404 46 420 7.90e-43 169
Msa1144390 MtrunA17_Chr5g0398521 33.777 376 216 8 24 372 57 426 1.48e-42 167
Msa1144390 MtrunA17_Chr3g0134191 33.247 385 212 10 70 411 46 428 2.87e-42 167
Msa1144390 MtrunA17_Chr2g0319271 33.690 374 192 11 4 340 380 734 3.11e-41 162
Msa1144390 MtrunA17_Chr2g0312631 30.819 464 278 17 25 463 385 830 3.53e-41 163
Msa1144390 MtrunA17_Chr3g0102921 31.738 397 217 12 16 377 430 807 3.67e-41 164
Msa1144390 MtrunA17_Chr7g0271961 31.818 374 227 10 16 376 393 751 7.03e-41 162
Msa1144390 MtrunA17_Chr5g0411971 32.084 427 262 13 7 416 381 796 1.28e-40 162
Msa1144390 MtrunA17_Chr7g0245931 31.733 375 230 6 24 375 52 423 1.38e-40 161
Msa1144390 MtrunA17_Chr5g0447041 30.824 425 213 13 16 377 426 832 5.58e-40 160
Msa1144390 MtrunA17_Chr2g0280421 33.240 358 211 9 1 341 415 761 7.74e-40 158
Msa1144390 MtrunA17_Chr4g0042061 33.242 364 206 9 4 340 413 766 1.72e-39 157
Msa1144390 MtrunA17_Chr2g0331761 33.735 332 205 7 24 347 185 509 2.17e-39 156
Msa1144390 MtrunA17_Chr5g0421521 30.580 448 275 14 7 429 356 792 2.65e-39 157
Msa1144390 MtrunA17_Chr5g0421591 30.804 448 274 14 7 429 356 792 6.22e-39 156
Msa1144390 MtrunA17_Chr4g0049011 31.319 364 214 8 3 340 259 612 1.02e-38 153
Msa1144390 MtrunA17_Chr6g0485471 33.529 340 213 7 13 347 108 439 4.39e-38 152
Msa1144390 MtrunA17_Chr1g0191851 33.684 380 210 13 25 378 148 511 3.28e-37 150
Msa1144390 MtrunA17_Chr7g0238581 29.798 396 231 11 24 384 25 408 9.50e-37 147
Msa1144390 MtrunA17_Chr7g0272871 31.894 417 246 13 25 417 128 530 1.24e-36 148
Msa1144390 MtrunA17_Chr2g0295881 33.138 341 208 8 24 347 197 534 1.00e-35 145
Msa1144390 MtrunA17_Chr7g0257301 31.707 410 210 13 16 373 384 775 1.25e-35 146
Msa1144390 MtrunA17_Chr4g0067421 32.733 333 204 8 24 340 205 533 4.81e-33 137
Msa1144390 MtrunA17_Chr3g0101021 28.272 382 224 9 25 374 76 439 1.38e-31 133
Msa1144390 MtrunA17_Chr5g0445211 28.818 347 215 8 71 386 109 454 2.24e-29 126
Msa1144390 MtrunA17_Chr1g0191181 27.889 398 225 9 71 448 128 483 3.32e-27 117
Msa1144390 MtrunA17_Chr7g0269681 38.122 181 104 4 196 376 49 221 8.38e-25 108
Msa1144390 MtrunA17_Chr8g0372181 51.648 91 43 1 779 868 1 91 2.79e-23 95.1
Msa1144390 MtrunA17_Chr8g0386891 40.690 145 80 3 196 340 12 150 5.47e-21 96.7
Msa1144390 MtrunA17_Chr8g0367581 29.909 331 202 13 25 344 147 458 8.48e-19 92.4
Msa1144390 MtrunA17_Chr6g0484501 33.333 207 112 5 196 400 42 224 3.04e-17 82.0
Msa1144390 MtrunA17_Chr6g0470541 23.585 318 214 11 21 326 2 302 1.97e-16 84.3
Msa1144390 MtrunA17_Chr8g0390991 38.621 145 83 3 196 340 12 150 2.81e-16 83.2
Msa1144390 MtrunA17_Chr7g0269691 35.758 165 91 5 16 169 392 552 4.08e-14 76.3
Msa1144390 MtrunA17_Chr8g0390981 33.143 175 98 6 9 169 499 668 4.60e-14 76.3
Msa1144390 MtrunA17_Chr6g0484511 33.548 155 85 5 25 166 290 439 6.01e-14 75.5
Msa1144390 MtrunA17_Chr8g0386901 32.500 160 95 4 16 164 475 632 2.37e-13 73.9
Msa1144390 MtrunA17_Chr3g0142841 25.191 262 176 6 73 322 145 398 9.12e-13 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1144390 AT2G21300.2 58.297 916 283 19 1 872 1 861 0.0 984
Msa1144390 AT2G21300.4 58.297 916 283 19 1 872 1 861 0.0 984
Msa1144390 AT2G21300.3 58.297 916 283 19 1 872 1 861 0.0 984
Msa1144390 AT2G21300.1 58.297 916 283 19 1 872 1 861 0.0 984
Msa1144390 AT2G21300.5 58.297 916 283 19 1 872 1 861 0.0 984
Msa1144390 AT4G38950.3 58.192 885 276 19 22 872 11 835 0.0 935
Msa1144390 AT4G38950.5 58.192 885 276 19 22 872 11 835 0.0 935
Msa1144390 AT4G38950.4 58.192 885 276 19 22 872 11 835 0.0 935
Msa1144390 AT4G38950.1 58.192 885 276 19 22 872 11 835 0.0 935
Msa1144390 AT4G38950.2 58.192 885 276 19 22 872 11 835 0.0 935
Msa1144390 AT3G51150.2 64.238 453 151 4 13 458 6 454 0.0 593
Msa1144390 AT3G51150.2 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1144390 AT3G51150.1 64.238 453 151 4 13 458 6 454 0.0 593
Msa1144390 AT3G51150.1 51.471 204 95 3 672 872 847 1049 1.77e-57 214
Msa1144390 AT3G51150.4 64.238 453 151 4 13 458 6 454 0.0 593
Msa1144390 AT3G51150.4 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1144390 AT3G51150.3 64.238 453 151 4 13 458 6 454 0.0 593
Msa1144390 AT3G51150.3 51.471 204 95 3 672 872 849 1051 1.76e-57 214
Msa1144390 AT5G66310.2 67.371 426 135 2 13 434 7 432 0.0 583
Msa1144390 AT5G66310.2 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1144390 AT5G66310.3 67.371 426 135 2 13 434 7 432 0.0 583
Msa1144390 AT5G66310.3 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1144390 AT5G66310.1 67.371 426 135 2 13 434 7 432 0.0 583
Msa1144390 AT5G66310.1 43.200 250 124 5 632 872 820 1060 7.01e-52 197
Msa1144390 AT4G24170.1 67.464 418 121 7 20 428 2 413 3.70e-180 546
Msa1144390 AT4G24170.1 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa1144390 AT4G24170.2 67.464 418 121 7 20 428 2 413 3.70e-180 546
Msa1144390 AT4G24170.2 38.362 232 113 6 643 870 791 996 4.45e-36 147
Msa1144390 AT1G18370.1 58.034 417 157 5 22 433 29 432 5.01e-146 456
Msa1144390 AT1G18370.1 36.948 249 134 5 632 864 721 962 3.15e-44 173
Msa1144390 AT3G43210.3 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1144390 AT3G43210.3 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1144390 AT3G43210.5 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1144390 AT3G43210.5 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1144390 AT3G43210.2 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1144390 AT3G43210.2 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1144390 AT3G43210.4 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1144390 AT3G43210.4 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1144390 AT3G43210.1 56.699 418 170 5 9 419 9 422 3.37e-143 448
Msa1144390 AT3G43210.1 34.483 319 180 12 567 863 614 925 2.57e-41 164
Msa1144390 AT5G42490.2 69.145 269 82 1 20 288 5 272 6.26e-115 377
Msa1144390 AT5G42490.2 46.328 177 86 3 696 870 906 1075 2.02e-43 171
Msa1144390 AT5G42490.1 69.145 269 82 1 20 288 5 272 6.74e-115 377
Msa1144390 AT5G42490.1 46.328 177 86 3 696 870 910 1079 1.76e-43 171
Msa1144390 AT3G51150.5 64.014 289 95 3 175 458 17 301 3.63e-111 362
Msa1144390 AT3G51150.5 51.471 204 95 3 672 872 696 898 8.55e-58 214
Msa1144390 AT3G10180.2 42.667 375 193 5 23 385 2 366 2.30e-84 295
Msa1144390 AT3G10180.1 42.667 375 193 5 23 385 2 366 3.01e-84 295
Msa1144390 AT3G12020.4 44.077 363 188 5 21 377 66 419 6.45e-79 276
Msa1144390 AT3G12020.1 44.077 363 188 5 21 377 66 419 6.45e-79 276
Msa1144390 AT3G12020.3 40.898 423 222 9 21 425 66 478 2.48e-78 275
Msa1144390 AT3G12020.2 40.898 423 222 9 21 425 66 478 2.48e-78 275
Msa1144390 AT5G06670.8 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1144390 AT5G06670.4 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1144390 AT5G06670.7 41.598 363 197 5 21 377 63 416 6.57e-77 265
Msa1144390 AT5G06670.5 41.598 363 197 5 21 377 63 416 1.28e-76 265
Msa1144390 AT1G21730.1 42.400 375 199 7 21 388 72 436 3.33e-75 264
Msa1144390 AT5G06670.2 41.598 363 197 5 21 377 63 416 4.18e-75 265
Msa1144390 AT5G06670.3 41.598 363 197 5 21 377 63 416 4.18e-75 265
Msa1144390 AT1G59540.1 42.350 366 189 7 23 377 2 356 9.45e-74 258
Msa1144390 AT5G06670.6 40.591 372 197 6 21 377 63 425 2.27e-72 257
Msa1144390 AT5G06670.1 40.591 372 197 6 21 377 63 425 2.27e-72 257
Msa1144390 AT4G39050.1 37.292 421 239 7 18 425 92 500 3.20e-72 258
Msa1144390 AT2G21380.2 37.198 414 235 8 25 425 105 506 5.05e-71 254
Msa1144390 AT2G21380.1 37.198 414 235 8 25 425 105 506 5.05e-71 254
Msa1144390 AT2G28620.1 34.000 450 258 9 9 430 40 478 1.51e-58 218
Msa1144390 AT2G28620.3 34.000 450 258 9 9 430 40 478 1.54e-58 218
Msa1144390 AT2G28620.2 34.000 450 258 9 9 430 40 478 1.54e-58 218
Msa1144390 AT1G59540.2 44.828 261 134 3 122 377 9 264 1.31e-57 211
Msa1144390 AT2G36200.1 32.960 446 253 10 10 421 3 436 2.43e-54 204
Msa1144390 AT4G14150.1 35.013 397 206 8 25 386 92 471 1.77e-53 202
Msa1144390 AT2G36200.2 33.333 435 244 10 10 410 3 425 2.14e-53 202
Msa1144390 AT3G45850.2 32.639 432 261 6 25 430 56 483 2.80e-53 201
Msa1144390 AT3G45850.1 32.639 432 261 6 25 430 56 483 2.80e-53 201
Msa1144390 AT3G23670.2 34.152 407 213 9 17 387 91 478 6.12e-52 197
Msa1144390 AT3G23670.1 34.152 407 213 9 17 387 91 478 1.44e-51 197
Msa1144390 AT2G37420.1 32.104 461 255 12 22 442 46 488 8.45e-51 194
Msa1144390 AT2G37420.2 32.104 461 255 12 22 442 46 488 8.45e-51 194
Msa1144390 AT3G49650.1 34.759 374 215 10 25 376 15 381 2.74e-50 191
Msa1144390 AT3G17360.3 36.842 399 198 12 25 390 169 546 1.22e-49 191
Msa1144390 AT3G17360.2 36.842 399 198 12 25 390 169 546 1.24e-49 191
Msa1144390 AT3G17360.1 37.143 385 189 11 25 376 169 533 1.28e-49 191
Msa1144390 AT3G44050.1 35.696 381 203 8 25 374 94 463 8.52e-48 185
Msa1144390 AT3G63480.2 34.930 355 202 7 25 360 4 348 2.01e-46 173
Msa1144390 AT3G19050.1 36.667 360 181 6 25 353 194 537 6.04e-46 180
Msa1144390 AT1G18550.1 34.903 361 197 9 9 346 136 481 1.10e-45 176
Msa1144390 AT5G60930.3 31.633 392 213 9 71 414 45 429 4.08e-45 177
Msa1144390 AT5G65930.1 33.073 384 229 9 7 375 870 1240 4.15e-45 177
Msa1144390 AT5G65930.2 32.884 371 224 8 7 365 871 1228 4.27e-45 176
Msa1144390 AT5G60930.2 31.633 392 213 9 71 414 45 429 4.39e-45 177
Msa1144390 AT5G65930.3 32.884 371 224 8 7 365 877 1234 4.60e-45 176
Msa1144390 AT3G63480.1 34.540 359 202 9 25 360 4 352 5.26e-45 169
Msa1144390 AT5G60930.1 31.633 392 213 9 71 414 45 429 5.58e-45 176
Msa1144390 AT5G27000.1 34.133 375 222 10 16 376 386 749 4.85e-44 172
Msa1144390 AT2G47500.1 35.550 391 218 12 16 382 391 771 5.69e-44 172
Msa1144390 AT2G47500.2 35.550 391 218 12 16 382 391 771 6.83e-44 172
Msa1144390 AT1G09170.4 33.416 404 227 12 16 393 426 813 6.94e-44 171
Msa1144390 AT1G09170.5 33.002 403 230 11 16 393 426 813 8.26e-44 172
Msa1144390 AT1G09170.2 33.002 403 230 11 16 393 426 813 8.32e-44 172
Msa1144390 AT3G50240.2 30.679 427 234 13 25 404 26 437 3.13e-43 170
Msa1144390 AT3G50240.1 31.075 428 231 13 25 404 26 437 3.13e-43 170
Msa1144390 AT3G50240.4 31.075 428 231 13 25 404 26 437 3.84e-43 170
Msa1144390 AT5G47820.2 32.767 412 221 13 25 389 12 414 6.86e-43 169
Msa1144390 AT5G47820.1 32.767 412 221 13 25 389 12 414 6.86e-43 169
Msa1144390 AT1G09170.3 33.693 371 220 10 16 372 426 784 1.59e-42 167
Msa1144390 AT1G09170.7 33.693 371 220 10 16 372 426 784 1.59e-42 167
Msa1144390 AT1G12430.1 33.065 372 223 7 24 372 70 438 2.53e-42 167
Msa1144390 AT1G12430.2 33.065 372 223 7 24 372 70 438 2.85e-42 167
Msa1144390 AT3G16060.1 34.694 343 205 8 13 347 162 493 1.39e-41 163
Msa1144390 AT3G44730.2 33.815 346 193 10 16 340 414 744 2.42e-41 164
Msa1144390 AT3G44730.3 33.815 346 193 10 16 340 414 744 2.42e-41 164
Msa1144390 AT3G44730.1 33.815 346 193 10 16 340 369 699 2.70e-41 164
Msa1144390 AT3G44730.4 33.815 346 193 10 16 340 369 699 2.70e-41 164
Msa1144390 AT5G54670.3 33.056 360 211 7 4 341 317 668 3.92e-41 162
Msa1144390 AT1G01950.1 29.861 432 248 10 16 421 55 457 5.24e-41 163
Msa1144390 AT5G54670.1 33.056 360 211 7 4 341 377 728 5.88e-41 162
Msa1144390 AT5G54670.2 33.056 360 211 7 4 341 377 728 5.88e-41 162
Msa1144390 AT1G01950.2 29.861 432 248 10 16 421 55 457 5.90e-41 162
Msa1144390 AT1G01950.3 29.861 432 248 10 16 421 55 457 6.10e-41 163
Msa1144390 AT4G27180.1 33.425 362 207 9 4 341 368 719 9.77e-41 161
Msa1144390 AT4G27180.2 33.425 362 207 9 4 341 368 719 9.77e-41 161
Msa1144390 AT2G22610.2 31.415 417 238 13 7 407 400 784 1.20e-40 162
Msa1144390 AT5G27550.2 33.178 428 231 13 25 440 133 517 1.59e-40 160
Msa1144390 AT5G27550.1 33.178 428 231 13 25 440 133 517 1.59e-40 160
Msa1144390 AT3G54870.1 31.105 389 214 10 56 423 135 490 2.35e-40 161
Msa1144390 AT3G54870.3 31.105 389 214 10 56 423 135 490 2.43e-40 161
Msa1144390 AT5G41310.1 31.971 416 227 14 16 418 414 786 2.81e-40 161
Msa1144390 AT3G54870.2 31.105 389 214 10 56 423 135 490 2.91e-40 161
Msa1144390 AT1G73860.1 30.846 402 235 12 25 409 510 885 1.21e-39 159
Msa1144390 AT4G05190.2 33.333 345 193 8 25 341 416 751 1.63e-39 157
Msa1144390 AT4G05190.1 32.597 362 207 8 8 341 412 764 1.71e-39 157
Msa1144390 AT1G73860.2 30.846 402 235 12 25 409 427 802 3.22e-39 157
Msa1144390 AT4G21270.1 32.464 345 196 8 25 341 432 767 4.96e-38 153
Msa1144390 AT1G63640.3 30.693 404 236 12 16 402 464 840 1.20e-37 153
Msa1144390 AT1G63640.5 30.693 404 236 12 16 402 454 830 1.21e-37 153
Msa1144390 AT1G63640.1 30.693 404 236 12 16 402 464 840 1.33e-37 152
Msa1144390 AT1G63640.4 30.693 404 236 12 16 402 464 840 1.33e-37 152
Msa1144390 AT1G63640.2 31.017 403 229 13 16 402 464 833 1.36e-37 152
Msa1144390 AT2G22610.1 26.275 647 411 21 7 601 400 1032 1.39e-37 152
Msa1144390 AT2G22610.3 26.275 647 411 21 7 601 401 1033 1.52e-37 152
Msa1144390 AT3G10310.2 34.746 354 177 12 16 340 355 683 2.14e-37 152
Msa1144390 AT3G10310.1 34.746 354 177 12 16 340 355 683 2.39e-37 152
Msa1144390 AT1G09170.6 33.754 317 188 8 16 319 426 733 2.58e-37 150
Msa1144390 AT1G09170.8 33.754 317 188 8 16 319 426 733 2.58e-37 150
Msa1144390 AT1G18410.3 32.727 330 200 8 25 340 490 811 3.91e-37 151
Msa1144390 AT1G18410.2 32.727 330 200 8 25 340 490 811 3.91e-37 151
Msa1144390 AT1G18410.4 32.727 330 200 8 25 340 633 954 6.17e-37 150
Msa1144390 AT1G72250.4 29.913 458 280 16 4 436 492 933 1.16e-36 150
Msa1144390 AT1G72250.3 29.913 458 280 16 4 436 493 934 1.19e-36 150
Msa1144390 AT1G72250.2 29.913 458 280 16 4 436 481 922 1.43e-36 149
Msa1144390 AT1G72250.1 29.913 458 280 16 4 436 472 913 1.55e-36 149
Msa1144390 AT1G18410.5 32.722 327 196 8 25 340 480 793 8.20e-36 147
Msa1144390 AT3G50240.3 33.138 341 173 9 111 404 3 335 9.30e-36 146
Msa1144390 AT1G18410.1 32.722 327 196 8 25 340 633 946 1.23e-35 146
Msa1144390 AT1G55550.1 32.888 374 205 12 25 375 92 442 3.94e-35 144
Msa1144390 AT1G09170.1 30.256 390 222 11 16 393 426 777 2.07e-34 142
Msa1144390 AT3G16630.2 31.287 342 210 7 24 347 193 527 6.16e-34 140
Msa1144390 AT3G16630.1 31.287 342 210 7 24 347 193 527 6.16e-34 140
Msa1144390 AT5G02370.1 28.696 345 212 11 25 353 21 347 2.26e-32 133
Msa1144390 AT3G20150.2 27.507 349 217 6 71 386 136 481 6.82e-31 131
Msa1144390 AT3G20150.1 27.507 349 217 6 71 386 136 481 8.30e-31 131
Msa1144390 AT1G01950.4 29.730 333 204 6 107 413 1 329 8.32e-29 124
Msa1144390 AT5G27950.1 31.310 313 184 8 71 367 119 416 1.83e-28 122
Msa1144390 AT5G65460.2 29.305 331 204 10 25 344 139 450 6.25e-21 99.4
Msa1144390 AT5G65460.6 29.305 331 204 10 25 344 139 450 6.56e-21 99.4
Msa1144390 AT5G65460.4 29.305 331 204 10 25 344 139 450 6.97e-21 99.4
Msa1144390 AT5G65460.1 29.305 331 204 10 25 344 139 450 7.64e-21 99.4
Msa1144390 AT5G65460.3 28.402 338 205 9 25 344 139 457 2.19e-20 97.8
Msa1144390 AT5G27950.2 30.078 256 155 6 122 367 9 250 7.51e-19 90.9
Msa1144390 AT5G10470.1 28.399 331 207 9 25 344 143 454 3.07e-18 90.9
Msa1144390 AT5G10470.2 28.399 331 207 9 25 344 143 454 3.32e-18 90.9
Msa1144390 AT5G23910.2 25.912 274 176 9 60 323 45 301 1.50e-15 81.6
Msa1144390 AT5G23910.1 25.912 274 176 9 60 323 41 297 1.59e-15 81.6
Msa1144390 AT4G14330.1 27.027 296 175 9 71 344 89 365 7.68e-15 79.7
Msa1144390 AT1G20060.7 29.091 275 157 9 73 323 165 425 3.43e-12 70.9
Msa1144390 AT1G20060.4 29.091 275 157 9 73 323 165 425 3.60e-12 70.9
Msa1144390 AT1G20060.8 29.091 275 157 9 73 323 165 425 3.60e-12 70.9
Msa1144390 AT1G20060.10 29.091 275 157 9 73 323 165 425 3.62e-12 70.9
Msa1144390 AT1G20060.3 29.091 275 157 9 73 323 165 425 3.75e-12 70.9
Msa1144390 AT1G20060.9 29.091 275 157 9 73 323 165 425 3.77e-12 70.9
Msa1144390 AT1G20060.5 29.091 275 157 9 73 323 165 425 4.00e-12 70.9
Msa1144390 AT1G20060.6 29.091 275 157 9 73 323 165 425 4.24e-12 70.9
Msa1144390 AT1G20060.2 29.091 275 157 9 73 323 165 425 4.28e-12 70.9

Find 221 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAACCATCTAAATTTAA+TGG 0.137277 7_4:-20349408 None:intergenic
CTGGAAGACCAGATGGTTTA+TGG 0.148054 7_4:+20349373 Msa1144390:CDS
AAGTTCTGCCAGGGAATTTC+TGG 0.153690 7_4:+20347743 Msa1144390:CDS
CCATTCAATGGGTTTGAAAA+AGG 0.199093 7_4:+20349345 Msa1144390:CDS
TGCAGCTAGCAGACCGTTTA+TGG 0.204765 7_4:+20350592 Msa1144390:CDS
CTCACATTGCGTGTTGAATT+TGG 0.223910 7_4:+20344716 None:intergenic
TTTGGCAGGAAGAAGATTTA+TGG 0.227161 7_4:+20348779 Msa1144390:intron
TCAGATGGATAAGGAAATTA+AGG 0.238308 7_4:+20348559 Msa1144390:intron
CACATACCAATCTGATAATT+TGG 0.239249 7_4:-20347637 None:intergenic
TTCCTCCTTGCTGCAAATTA+AGG 0.242724 7_4:+20351085 Msa1144390:three_prime_UTR
TTTGGCAGACAGAGTATTTC+GGG 0.243450 7_4:+20346610 Msa1144390:intron
CCTGTCTGGTGTCTGGTGTC+TGG 0.249052 7_4:-20345040 None:intergenic
AAGCTCTACCTCCATGTAAA+TGG 0.274251 7_4:-20350253 None:intergenic
AAGTAGGTCCTGTGGGTTAA+TGG 0.288853 7_4:-20350198 None:intergenic
AACGATTCTCAGTCTTCTAT+TGG 0.293108 7_4:+20349444 Msa1144390:CDS
ACAGTATCTGGAGGGGAAAA+TGG 0.295774 7_4:+20349150 Msa1144390:CDS
GATTTGGCTTTGACAGTATC+TGG 0.301840 7_4:+20349138 Msa1144390:CDS
CTTAAGTGACAACGGGGATT+TGG 0.305652 7_4:+20349122 Msa1144390:CDS
TTCAATCCATTAAATTTAGA+TGG 0.309591 7_4:+20349402 Msa1144390:CDS
TACATTAACCTGTGCTTTAG+TGG 0.313427 7_4:-20348302 None:intergenic
CTTTGGCAGACAGAGTATTT+CGG 0.315274 7_4:+20346609 Msa1144390:intron
CATAAACCATCTGGTCTTCC+AGG 0.318695 7_4:-20349372 None:intergenic
TCAAATGTGTAGACATTTCC+TGG 0.325306 7_4:-20349179 None:intergenic
TAAGTAAACTCCGGTTTATA+TGG 0.325660 7_4:-20347986 None:intergenic
CTCTCCATTTCTCCTGTCTC+AGG 0.330013 7_4:-20349318 None:intergenic
GAAAGATCAGATATCTAAAA+AGG 0.331016 7_4:+20348643 Msa1144390:CDS
ATCTCAAGCTGTTGCCTCTA+AGG 0.331700 7_4:-20349485 None:intergenic
ATACAAACTACTCACTTTAG+AGG 0.353065 7_4:+20350914 Msa1144390:three_prime_UTR
TTTAATTATTCAGATGGATA+AGG 0.359650 7_4:+20348550 Msa1144390:intron
TCATCCCAGCAACAAAAGTA+TGG 0.377323 7_4:-20349536 None:intergenic
TTTCCAAGTGCCTACACATT+TGG 0.377835 7_4:+20346018 Msa1144390:CDS
TGCTAATGAATCTGCAGATT+GGG 0.381276 7_4:+20345939 Msa1144390:CDS
CTGTCTGGTGTCTGGTGTCT+GGG 0.384502 7_4:-20345039 None:intergenic
TGCTAATATACGTCTTCATT+AGG 0.391068 7_4:+20350818 Msa1144390:three_prime_UTR
AACTTACTACACTAGCTGAT+AGG 0.394326 7_4:-20347785 None:intergenic
TTGGCAGGAAGAAGATTTAT+GGG 0.394933 7_4:+20348780 Msa1144390:intron
ATTATTCTTCTTTATGATCT+CGG 0.398338 7_4:+20344866 Msa1144390:five_prime_UTR
GACCAGTCTAAAGGAGTTCC+TGG 0.404750 7_4:-20350117 None:intergenic
CAAATCCCCGTTGTCACTTA+AGG 0.405474 7_4:-20349121 None:intergenic
ATCCGTCCTTAAGTGACAAC+GGG 0.408908 7_4:+20349115 Msa1144390:CDS
ATTGTATCGTATCGCCATTA+TGG 0.409503 7_4:+20351019 Msa1144390:three_prime_UTR
AGAGGAGACTCTACAGGATT+GGG 0.412152 7_4:+20347264 Msa1144390:CDS
TCTGGCTGTCTTTCTCAGAC+TGG 0.414517 7_4:-20350317 None:intergenic
AACCTTCACGCAATGTATTC+CGG 0.415906 7_4:-20345990 None:intergenic
GCATCTCAGGTATCATCAGC+TGG 0.417129 7_4:+20347942 Msa1144390:CDS
CGAGCCCTCAAGGAGATGTT+TGG 0.417430 7_4:+20350690 Msa1144390:CDS
CTGCTAATGAATCTGCAGAT+TGG 0.419350 7_4:+20345938 Msa1144390:CDS
AGGGAGCGAGCGTGCATCTC+AGG 0.420236 7_4:+20347929 Msa1144390:CDS
AGAAGATTCTTGTGTTACTT+AGG 0.420887 7_4:+20345887 Msa1144390:CDS
GTTCCTGGTGCCTCCTGCAT+TGG 0.421307 7_4:-20350102 None:intergenic
CAATGGAGAGACACTTGTTT+CGG 0.422658 7_4:-20350946 None:intergenic
CCGTCAGTGGATGACCTTAG+AGG 0.426876 7_4:+20349471 Msa1144390:CDS
GGCAACAGCTTGAGATCATC+TGG 0.430160 7_4:+20349492 Msa1144390:CDS
AATTCCTTTACCTTCACAAA+AGG 0.433816 7_4:-20347308 None:intergenic
AACTTTCTCCATAAACCATC+TGG 0.438525 7_4:-20349381 None:intergenic
AACTAGAAGCCGGAGTTGTT+CGG 0.440145 7_4:+20349275 Msa1144390:CDS
CTCTGTAAGTTTCTCTAGAA+CGG 0.444093 7_4:-20347245 None:intergenic
TTCCCTGGCAGAACTTTCAA+TGG 0.446524 7_4:-20347736 None:intergenic
CTATTTAACGAATGGGGCAT+TGG 0.449067 7_4:+20350546 Msa1144390:CDS
AACTCTCTAATGCGTATGTT+GGG 0.451837 7_4:-20348844 None:intergenic
TATGAAAAGCAGCTTGTTGA+TGG 0.452686 7_4:+20349579 Msa1144390:CDS
AGACAGTCAAATTCGTCATC+TGG 0.453086 7_4:-20351052 None:intergenic
CTGGAGAAGAGTTGTCGAAA+TGG 0.453784 7_4:+20345833 Msa1144390:CDS
TCATTAGGAGTGTGTACAGC+AGG 0.453816 7_4:+20350833 Msa1144390:three_prime_UTR
ATGGAGAGGACGCCATTCAA+TGG 0.453935 7_4:+20349333 Msa1144390:CDS
TATCAGTGTTGCACCATAAA+CGG 0.454876 7_4:-20350605 None:intergenic
TCAGTGTCCTGTCTGGTGTC+TGG 0.456424 7_4:-20345047 None:intergenic
TCTGTAAGTTTCTCTAGAAC+GGG 0.458045 7_4:-20347244 None:intergenic
TTCCCCTGAGACAGGAGAAA+TGG 0.463457 7_4:+20349314 Msa1144390:CDS
GAAAAGGCTATTTAACGAAT+GGG 0.464097 7_4:+20350539 Msa1144390:CDS
CAGAGGAGACTCTACAGGAT+TGG 0.465719 7_4:+20347263 Msa1144390:CDS
GAAATTTCCTTCTCATTCAA+AGG 0.470020 7_4:-20345916 None:intergenic
TTCTTGTGTTACTTAGGCTT+AGG 0.470717 7_4:+20345893 Msa1144390:CDS
TGGGATTAGCTTGTTAATTG+AGG 0.472715 7_4:+20345767 Msa1144390:five_prime_UTR
CTTCTTTGCAGTATTCATCA+AGG 0.474289 7_4:-20349041 None:intergenic
CTGTCTCCACTATTATATTG+AGG 0.476344 7_4:-20348874 None:intergenic
AAGAAGGTTGCCATATAAAC+CGG 0.478479 7_4:+20347976 Msa1144390:CDS
CAATCTCTACATGCCATGTC+AGG 0.480188 7_4:+20349222 Msa1144390:CDS
TCTCCATTTCTCCTGTCTCA+GGG 0.480908 7_4:-20349317 None:intergenic
CAGTGGAAAGACATATACTA+TGG 0.482105 7_4:+20346821 Msa1144390:CDS
CGCATACTGCAGCCTTGCTT+AGG 0.486895 7_4:+20348175 Msa1144390:CDS
ATCTCACCAAATTATCAGAT+TGG 0.487669 7_4:+20347631 Msa1144390:CDS
AACGTGATCTTGCTGAATCA+AGG 0.488340 7_4:+20348594 Msa1144390:CDS
TCCTTTGCCCAGAAATTCCC+TGG 0.488533 7_4:-20347751 None:intergenic
TCAGAGTCCTCAAGCATTTG+TGG 0.489326 7_4:+20348820 Msa1144390:CDS
TTGAAGTTAACGTGATTGTC+TGG 0.489517 7_4:-20350335 None:intergenic
TGGAGAGGACGCCATTCAAT+GGG 0.490245 7_4:+20349334 Msa1144390:CDS
TTACCAAATGTGTAGGCACT+TGG 0.492018 7_4:-20346021 None:intergenic
ACAAACAGATTCCATTTACA+TGG 0.493660 7_4:+20350242 Msa1144390:CDS
AGACAATCACGTTAACTTCA+AGG 0.495649 7_4:+20350337 Msa1144390:CDS
TTATGAAGCTTATGCGGAAG+AGG 0.496180 7_4:+20350499 Msa1144390:CDS
TAACACGGCGAAGCTATTCA+TGG 0.498028 7_4:+20350733 Msa1144390:CDS
TAATCAGTGTTGGAGGTAGC+AGG 0.499690 7_4:-20348397 None:intergenic
CTTTACCTTCACAAAAGGAT+AGG 0.501285 7_4:-20347303 None:intergenic
TAATGTAGTGATGTCTGATA+AGG 0.501558 7_4:+20348318 Msa1144390:CDS
CTGGTACAACATAACCATAA+TGG 0.502481 7_4:-20351033 None:intergenic
TGAAACAAGGCAGGTATATG+AGG 0.503530 7_4:+20346640 Msa1144390:CDS
GGAAAGACATATACTATGGT+TGG 0.503643 7_4:+20346825 Msa1144390:CDS
AACAATCCTCAATATAATAG+TGG 0.503991 7_4:+20348868 Msa1144390:CDS
TGGAGAAGAGTTGTCGAAAT+GGG 0.504063 7_4:+20345834 Msa1144390:CDS
TCTTTATGATCTCGGTGTGT+CGG 0.506170 7_4:+20344874 Msa1144390:five_prime_UTR
GCCAGGGAATTTCTGGGCAA+AGG 0.507390 7_4:+20347750 Msa1144390:CDS
GCTTAGGCCTTTGAATGAGA+AGG 0.507783 7_4:+20345909 Msa1144390:CDS
AATACACATATCTATCTCAA+TGG 0.510126 7_4:-20350963 None:intergenic
AGTTCTGCCAGGGAATTTCT+GGG 0.510390 7_4:+20347744 Msa1144390:CDS
ATGACTGCTTCCCCTGAGAC+AGG 0.512104 7_4:+20349306 Msa1144390:CDS
GAAAGATCAACAGATAGAAA+AGG 0.513788 7_4:+20348438 Msa1144390:CDS
TTTCTGAGGAAGAGAGGAAA+AGG 0.515753 7_4:+20350523 Msa1144390:CDS
TCGAAATGGGAGAAGATGAA+TGG 0.517570 7_4:+20345847 Msa1144390:CDS
ATTTGACATGTTTCCTGACA+TGG 0.518750 7_4:-20349235 None:intergenic
AAGTCCAAACATCTCCTTGA+GGG 0.519271 7_4:-20350694 None:intergenic
TGTTGCTGGGATGAAAGAAA+TGG 0.520014 7_4:+20349545 Msa1144390:CDS
CATCTCAGGTATCATCAGCT+GGG 0.520906 7_4:+20347943 Msa1144390:CDS
AAAGCAGCTTGTTGATGGTC+AGG 0.521553 7_4:+20349584 Msa1144390:CDS
AGACCATTGAAAGTTCTGCC+AGG 0.523244 7_4:+20347733 Msa1144390:intron
TGTTCAACATGACTCCGTGC+AGG 0.523415 7_4:-20348235 None:intergenic
CAAAGCTACATAATCAGTGT+TGG 0.525785 7_4:-20348407 None:intergenic
TTACGTGTCAGTGTCCTGTC+TGG 0.526016 7_4:-20345054 None:intergenic
GACACAGTGTGAGAGCTCTT+CGG 0.528394 7_4:+20350460 Msa1144390:intron
ACTTACTACACTAGCTGATA+GGG 0.529106 7_4:-20347784 None:intergenic
CTTGCAGCTCAGAGACAAGT+AGG 0.530862 7_4:+20347578 Msa1144390:intron
GAGAAGATGAATGGAGTTAG+TGG 0.531131 7_4:+20345856 Msa1144390:CDS
GATCCAATGCAGGAGGCACC+AGG 0.532906 7_4:+20350099 Msa1144390:CDS
TGAGGATTTGCTGCGCATGG+TGG 0.534211 7_4:+20348619 Msa1144390:CDS
AACTGCAGAGACCAGTCTAA+AGG 0.537534 7_4:-20350126 None:intergenic
AAAGAGTTGGCCAGGTTGGA+AGG 0.537609 7_4:+20348361 Msa1144390:CDS
GTATATTAGCAATGCCACTT+TGG 0.538179 7_4:-20350806 None:intergenic
TCTTGCTGAATCAAGGATTG+AGG 0.544535 7_4:+20348601 Msa1144390:CDS
ATCACAAATTAACTAGAAGC+CGG 0.545574 7_4:+20349265 Msa1144390:CDS
CCTAAACAAAAGAAAGAAGT+AGG 0.545806 7_4:-20350214 None:intergenic
AGAGCAGGGACGAGCCCTCA+AGG 0.546310 7_4:+20350680 Msa1144390:CDS
ACTTACAGAGGAGACTCTAC+AGG 0.547856 7_4:+20347258 Msa1144390:CDS
TTGGATTGAATTCAAAGCGC+AGG 0.548324 7_4:+20350565 Msa1144390:CDS
CTGAGGAATGTGAAAGATGT+AGG 0.548594 7_4:+20350072 Msa1144390:CDS
GGAAAAGGCTATTTAACGAA+TGG 0.550100 7_4:+20350538 Msa1144390:CDS
ATACTGCAGCCTTGCTTAGG+TGG 0.551117 7_4:+20348178 Msa1144390:CDS
GATTAGCTTGTTAATTGAGG+TGG 0.551277 7_4:+20345770 Msa1144390:five_prime_UTR
CAACCTCAGCTTACGAATGA+CGG 0.553205 7_4:-20348018 None:intergenic
GGCTTTGACAGTATCTGGAG+GGG 0.554999 7_4:+20349143 Msa1144390:CDS
CATTGCGTGTTGAATTTGGT+AGG 0.556021 7_4:+20344720 None:intergenic
CGACCGTCATTCGTAAGCTG+AGG 0.556042 7_4:+20348015 Msa1144390:CDS
GGATCATCACGCAACCTAAG+TGG 0.556914 7_4:-20347110 None:intergenic
AACTGAATCATTTGAAACAC+AGG 0.558277 7_4:-20344981 None:intergenic
TGTAGGTGTTGATCCAATGC+AGG 0.558725 7_4:+20350089 Msa1144390:CDS
GAGGATTTGCTGCGCATGGT+GGG 0.558929 7_4:+20348620 Msa1144390:CDS
GTTCAACATGACTCCGTGCA+GGG 0.560044 7_4:-20348234 None:intergenic
CAGTGTGAGAGCTCTTCGGC+GGG 0.560979 7_4:+20350464 Msa1144390:intron
CAATAGTTGCGAGGCTAGTG+AGG 0.563553 7_4:+20350652 Msa1144390:CDS
AGCTACATAATCAGTGTTGG+AGG 0.564822 7_4:-20348404 None:intergenic
AGAAGTTCGATGTGTCGAGT+TGG 0.565179 7_4:+20349059 Msa1144390:CDS
AATACAACCCTCTAGAATGT+AGG 0.566519 7_4:-20350994 None:intergenic
GACCATTGAAAGTTCTGCCA+GGG 0.568444 7_4:+20347734 Msa1144390:intron
GCATATGGGCAAACAAGCAG+TGG 0.571286 7_4:+20346804 Msa1144390:CDS
AGGGGAAAATGGAACAAGCC+AGG 0.572223 7_4:+20349161 Msa1144390:CDS
ACTATTAACCTACATTCTAG+AGG 0.572333 7_4:+20350986 Msa1144390:three_prime_UTR
GAACTCTCTAATGCGTATGT+TGG 0.572921 7_4:-20348845 None:intergenic
CTATTAACCTACATTCTAGA+GGG 0.574371 7_4:+20350987 Msa1144390:three_prime_UTR
GGATTCCCTGGAAGACCAGA+TGG 0.574754 7_4:+20349366 Msa1144390:CDS
CACCAGGAACTCCTTTAGAC+TGG 0.575102 7_4:+20350115 Msa1144390:CDS
AAGAAAGAAGTAGGTCCTGT+GGG 0.577186 7_4:-20350205 None:intergenic
GAAATCGCTCTTTCAGTAGT+CGG 0.577913 7_4:+20346674 Msa1144390:CDS
AGAGGCTTTCTGAGGAAGAG+AGG 0.579952 7_4:+20350517 Msa1144390:CDS
TGTGATGCTCCGAACAACTC+CGG 0.580662 7_4:-20349284 None:intergenic
GCACTGACAACACTCCACTT+AGG 0.581250 7_4:+20347096 Msa1144390:CDS
CTCCATTTCTCCTGTCTCAG+GGG 0.581535 7_4:-20349316 None:intergenic
AGTGATGTCTGATAAGGCCT+TGG 0.583008 7_4:+20348324 Msa1144390:CDS
TTCTATTGGAAGTCCGTCAG+TGG 0.593519 7_4:+20349458 Msa1144390:CDS
TGGCTTTGACAGTATCTGGA+GGG 0.594075 7_4:+20349142 Msa1144390:CDS
ACTGGTCTCTGCAGTTCAAG+AGG 0.598036 7_4:+20350133 Msa1144390:CDS
CTTGAGATCATCTGGTGATG+AGG 0.598316 7_4:+20349500 Msa1144390:CDS
TATGCGGAAGAGGCTTTCTG+AGG 0.600165 7_4:+20350509 Msa1144390:CDS
GAATGCAGTAAGGGAAGACA+TGG 0.600216 7_4:+20348121 Msa1144390:intron
TACCGGAATACATTGCGTGA+AGG 0.600495 7_4:+20345988 Msa1144390:CDS
ATTTAACTTACCAAATGTGT+AGG 0.602058 7_4:-20346028 None:intergenic
GACAGTGGAAGTATTCAAGA+TGG 0.602866 7_4:+20348892 Msa1144390:CDS
GCTTCACACCTCAGCTAACA+CGG 0.603431 7_4:+20350718 Msa1144390:CDS
AGAAGTTACCACTAAAGCAC+AGG 0.604313 7_4:+20348294 Msa1144390:CDS
CTAGCATTGCCACCTAAGCA+AGG 0.606325 7_4:-20348187 None:intergenic
GGGTGACTGTGAAACAAGGC+AGG 0.609708 7_4:+20346631 Msa1144390:CDS
ACAAGGCAGGTATATGAGGA+AGG 0.610187 7_4:+20346644 Msa1144390:CDS
ATAAACCATCTGGTCTTCCA+GGG 0.610955 7_4:-20349371 None:intergenic
AAAGAAAGAAGTAGGTCCTG+TGG 0.614224 7_4:-20350206 None:intergenic
GATTGAGGATTTGCTGCGCA+TGG 0.614235 7_4:+20348616 Msa1144390:CDS
TTTGCACTTTGAGCCCTGCA+CGG 0.615755 7_4:+20348221 Msa1144390:CDS
TTCGGGGTGACTGTGAAACA+AGG 0.620796 7_4:+20346627 Msa1144390:CDS
GAGGAGACTCTACAGGATTG+GGG 0.620881 7_4:+20347265 Msa1144390:CDS
GCTATGTACCATTAACCCAC+AGG 0.622275 7_4:+20350190 Msa1144390:CDS
TAGCTTCGCCGTGTTAGCTG+AGG 0.622747 7_4:-20350726 None:intergenic
CCAGACACCAGACACCAGAC+AGG 0.623853 7_4:+20345040 Msa1144390:five_prime_UTR
AAATGCTTATGAAGCTTATG+CGG 0.625303 7_4:+20350493 Msa1144390:CDS
TACTACACTAGCTGATAGGG+TGG 0.625784 7_4:-20347781 None:intergenic
CATGTAGAGATTGTTCATCA+TGG 0.628406 7_4:-20349212 None:intergenic
ATCGCTCTTTCAGTAGTCGG+TGG 0.629355 7_4:+20346677 Msa1144390:CDS
TCCCCGTTGTCACTTAAGGA+CGG 0.631420 7_4:-20349117 None:intergenic
CCTCTAAGGTCATCCACTGA+CGG 0.638852 7_4:-20349471 None:intergenic
TTGGCTTTGACAGTATCTGG+AGG 0.640008 7_4:+20349141 Msa1144390:CDS
TTGCAGCACTCTGCATTACG+TGG 0.640783 7_4:-20350632 None:intergenic
AACCTTAATTTGCAGCAAGG+AGG 0.643967 7_4:-20351087 None:intergenic
GCTGGGGTGAGATTGAAAGA+AGG 0.644962 7_4:+20347960 Msa1144390:CDS
CATTAGGAGTGTGTACAGCA+GGG 0.646177 7_4:+20350834 Msa1144390:three_prime_UTR
ACAAACCTTAATTTGCAGCA+AGG 0.646264 7_4:-20351090 None:intergenic
CAATATAATAGTGGAGACAG+TGG 0.646811 7_4:+20348877 Msa1144390:CDS
GATCCGTCCTTAAGTGACAA+CGG 0.648355 7_4:+20349114 Msa1144390:CDS
ATCTCAGGTATCATCAGCTG+GGG 0.651883 7_4:+20347944 Msa1144390:CDS
AAAAGGCTATTTAACGAATG+GGG 0.654647 7_4:+20350540 Msa1144390:CDS
AGGATTTGCTGCGCATGGTG+GGG 0.662984 7_4:+20348621 Msa1144390:CDS
GTTGGGACCACAAATGCTTG+AGG 0.665970 7_4:-20348827 None:intergenic
CTGAGACAGGAGAAATGGAG+AGG 0.668611 7_4:+20349319 Msa1144390:CDS
ACAGTGTGAGAGCTCTTCGG+CGG 0.670786 7_4:+20350463 Msa1144390:intron
TTGGCAGACAGAGTATTTCG+GGG 0.673305 7_4:+20346611 Msa1144390:intron
TCGAAAGAGTAAGTAAACTC+CGG 0.675211 7_4:-20347995 None:intergenic
TGAATCATTTGAAACACAGG+AGG 0.678773 7_4:-20344978 None:intergenic
AGGAGACTCTACAGGATTGG+GGG 0.680080 7_4:+20347266 Msa1144390:CDS
AGGTGTTGATCCAATGCAGG+AGG 0.686174 7_4:+20350092 Msa1144390:CDS
AACAGATTCCATTTACATGG+AGG 0.691503 7_4:+20350245 Msa1144390:CDS
AGAGTGCTGCAATAGTTGCG+AGG 0.694058 7_4:+20350643 Msa1144390:CDS
TAGGTTGCGTGATGATCCTG+AGG 0.705593 7_4:+20347115 Msa1144390:CDS
AGGAGACAGATAGAAAACTG+AGG 0.728366 7_4:+20350055 Msa1144390:CDS
TAAGTCCAAACATCTCCTTG+AGG 0.730477 7_4:-20350695 None:intergenic
CGTTCTAGAGAAACTTACAG+AGG 0.745619 7_4:+20347246 Msa1144390:CDS
TCCGTCCTTAAGTGACAACG+GGG 0.757636 7_4:+20349116 Msa1144390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTCTATATATCTTTTT+CGG + chr7_4:20344904-20344923 Msa1144390:five_prime_UTR 10.0%
!! TAATTATTAATATTAATGCA+AGG - chr7_4:20348753-20348772 None:intergenic 10.0%
!! TATTAATAATTATCTTGATT+TGG + chr7_4:20348761-20348780 Msa1144390:intron 10.0%
!!! TCTATTCTAAAAATCATAAT+TGG + chr7_4:20345223-20345242 Msa1144390:intron 15.0%
!! TCATAAATTAATCATAATGA+TGG - chr7_4:20345631-20345650 None:intergenic 15.0%
!! CTAAATCAATTTACATAAAT+TGG + chr7_4:20346351-20346370 Msa1144390:intron 15.0%
!!! TATAAAGATATCTTTTTTAG+AGG - chr7_4:20349768-20349787 None:intergenic 15.0%
!! ATTATTCTTCTTTATGATCT+CGG + chr7_4:20344866-20344885 Msa1144390:five_prime_UTR 20.0%
!!! AAAGTAACAGATTTTTTTAC+TGG - chr7_4:20345160-20345179 None:intergenic 20.0%
!!! TTAGAATAGAAAACTTTTTC+TGG - chr7_4:20345213-20345232 None:intergenic 20.0%
!! TTAATGTTGATATGAACATT+TGG + chr7_4:20346306-20346325 Msa1144390:intron 20.0%
!! TCAATTTACATAAATTGGTA+AGG + chr7_4:20346356-20346375 Msa1144390:intron 20.0%
!!! TTTGACAGTTTTTTTTTTGA+AGG - chr7_4:20346405-20346424 None:intergenic 20.0%
!!! ATATTTTTGACTATGCAAAA+AGG + chr7_4:20346871-20346890 Msa1144390:CDS 20.0%
!!! TATTTTTGACTATGCAAAAA+GGG + chr7_4:20346872-20346891 Msa1144390:CDS 20.0%
!!! TGAATGCCTTTTAAATATAT+TGG + chr7_4:20347138-20347157 Msa1144390:intron 20.0%
!! ATCAGTCCAATATATTTAAA+AGG - chr7_4:20347147-20347166 None:intergenic 20.0%
!! GATACAAGTTTAATACATAA+AGG + chr7_4:20347169-20347188 Msa1144390:intron 20.0%
!!! TAGCTTTCTTGTTATATATA+TGG + chr7_4:20347335-20347354 Msa1144390:intron 20.0%
!! AAAATAAATTAAACTTCCGA+GGG - chr7_4:20348053-20348072 None:intergenic 20.0%
!!! ACGAATTTTAATTATTCAGA+TGG + chr7_4:20348544-20348563 Msa1144390:intron 20.0%
!! TTTAATTATTCAGATGGATA+AGG + chr7_4:20348550-20348569 Msa1144390:intron 20.0%
!! CTAACAAATAAAATAATGAC+CGG - chr7_4:20348999-20349018 None:intergenic 20.0%
!! TTCAATCCATTAAATTTAGA+TGG + chr7_4:20349402-20349421 Msa1144390:CDS 20.0%
!! ATGAAATTCAAGAAACAATA+AGG - chr7_4:20349632-20349651 None:intergenic 20.0%
!!! AAAATTTTGTTACCAGATAT+AGG + chr7_4:20349818-20349837 Msa1144390:intron 20.0%
!! ACATGATTATATTTATATGC+AGG + chr7_4:20349954-20349973 Msa1144390:intron 20.0%
!!! TGATATATTTAGAATCTAAG+TGG + chr7_4:20350396-20350415 Msa1144390:intron 20.0%
!! AAAACAAAAAAGAATGACTA+AGG - chr7_4:20350780-20350799 None:intergenic 20.0%
!!! TCTCTGTTTTTCAAAATCAT+CGG - chr7_4:20345083-20345102 None:intergenic 25.0%
!!! ATTTTGAAAAACAGAGAACA+AGG + chr7_4:20345086-20345105 Msa1144390:five_prime_UTR 25.0%
! ATAGTGTAAACTGAAAAACA+AGG + chr7_4:20345113-20345132 Msa1144390:five_prime_UTR 25.0%
! AAAAGAGAAAAAGTGATGAT+GGG - chr7_4:20345292-20345311 None:intergenic 25.0%
! AAAAAGAGAAAAAGTGATGA+TGG - chr7_4:20345293-20345312 None:intergenic 25.0%
!!! TATAACAGAAGTCTTGTTTT+TGG + chr7_4:20345422-20345441 Msa1144390:intron 25.0%
!! ACGTTTTTATCATAGTTAGT+TGG - chr7_4:20345463-20345482 None:intergenic 25.0%
! TTATTAACTACCGCAATTAA+TGG + chr7_4:20345576-20345595 Msa1144390:intron 25.0%
! TATTAACTACCGCAATTAAT+GGG + chr7_4:20345577-20345596 Msa1144390:intron 25.0%
! TAACAAAAACCCATTAATTG+CGG - chr7_4:20345589-20345608 None:intergenic 25.0%
! TAAAAGAGAAAAAGTGAAAC+GGG - chr7_4:20345724-20345743 None:intergenic 25.0%
! CTAAAAGAGAAAAAGTGAAA+CGG - chr7_4:20345725-20345744 None:intergenic 25.0%
!!! TTTTTCTCTTTTAGGAAACA+TGG + chr7_4:20345731-20345750 Msa1144390:intron 25.0%
!!! TTTTCTCTTTTAGGAAACAT+GGG + chr7_4:20345732-20345751 Msa1144390:intron 25.0%
!! ATGATACTACAATTTTGTAC+CGG + chr7_4:20345971-20345990 Msa1144390:CDS 25.0%
!! ATTTAACTTACCAAATGTGT+AGG - chr7_4:20346031-20346050 None:intergenic 25.0%
! AAGTTAAGACCATGTAAATT+GGG - chr7_4:20346276-20346295 None:intergenic 25.0%
! AAAGTTAAGACCATGTAAAT+TGG - chr7_4:20346277-20346296 None:intergenic 25.0%
! TCGATATAAATATCCAAGTT+TGG - chr7_4:20346447-20346466 None:intergenic 25.0%
! ATTATAACACATCAGATTGA+TGG + chr7_4:20346539-20346558 Msa1144390:intron 25.0%
!!! TTCTGAATTTTTGTTGTGAT+TGG + chr7_4:20346584-20346603 Msa1144390:intron 25.0%
! TATGTTAATCAAAAAGTGGA+AGG - chr7_4:20346752-20346771 None:intergenic 25.0%
!!! TTCCACTTTTTGATTAACAT+AGG + chr7_4:20346751-20346770 Msa1144390:intron 25.0%
! TATTTAACATTGGATGCAAT+GGG - chr7_4:20347378-20347397 None:intergenic 25.0%
! TTGAAAAGTAGTGACTATAA+CGG + chr7_4:20347468-20347487 Msa1144390:intron 25.0%
! TTTAAATCCATCACTTATTC+AGG + chr7_4:20347815-20347834 Msa1144390:intron 25.0%
! TTAAATCCATCACTTATTCA+GGG + chr7_4:20347816-20347835 Msa1144390:intron 25.0%
! CAAAATAAATTAAACTTCCG+AGG - chr7_4:20348054-20348073 None:intergenic 25.0%
! GAAAGATCAGATATCTAAAA+AGG + chr7_4:20348643-20348662 Msa1144390:CDS 25.0%
!!! AATAATTATCTTGATTTGGC+AGG + chr7_4:20348765-20348784 Msa1144390:intron 25.0%
! AACAATCCTCAATATAATAG+TGG + chr7_4:20348868-20348887 Msa1144390:CDS 25.0%
! TATACAGGAAGGAATATAAA+AGG - chr7_4:20348923-20348942 None:intergenic 25.0%
! AAACTATTTACTATACAGGA+AGG - chr7_4:20348934-20348953 None:intergenic 25.0%
! TTCCTGTATAGTAAATAGTT+TGG + chr7_4:20348933-20348952 Msa1144390:intron 25.0%
! TACCAAACTATTTACTATAC+AGG - chr7_4:20348938-20348957 None:intergenic 25.0%
! GTTGAACCATCTAAATTTAA+TGG - chr7_4:20349411-20349430 None:intergenic 25.0%
!!! TAAGTCACTTCTTTTTTTAG+AGG + chr7_4:20349684-20349703 Msa1144390:intron 25.0%
!!! TATAGAGGTATCTTTTTTAG+AGG - chr7_4:20349799-20349818 None:intergenic 25.0%
!! CTGGTAACAAAATTTTATAG+AGG - chr7_4:20349814-20349833 None:intergenic 25.0%
! TATTAGCAAACATGGATATA+TGG + chr7_4:20349927-20349946 Msa1144390:intron 25.0%
! ATTAGCAAACATGGATATAT+GGG + chr7_4:20349928-20349947 Msa1144390:intron 25.0%
! AAAAAGAGATAATTGAACTG+TGG + chr7_4:20350160-20350179 Msa1144390:CDS 25.0%
!!! CTACTTCTTTCTTTTGTTTA+GGG + chr7_4:20350215-20350234 Msa1144390:CDS 25.0%
!!! TACTTCTTTCTTTTGTTTAG+GGG + chr7_4:20350216-20350235 Msa1144390:CDS 25.0%
! CATCAAAAAATGTTTCTTTC+AGG - chr7_4:20350293-20350312 None:intergenic 25.0%
! TCACATACTGAAATAAAAGT+AGG - chr7_4:20350379-20350398 None:intergenic 25.0%
! AATACACATATCTATCTCAA+TGG - chr7_4:20350966-20350985 None:intergenic 25.0%
! AACTGAATCATTTGAAACAC+AGG - chr7_4:20344984-20345003 None:intergenic 30.0%
TGTAAACTGAAAAACAAGGT+AGG + chr7_4:20345117-20345136 Msa1144390:intron 30.0%
! TTGTTCTCAAGCATTGTTTA+AGG + chr7_4:20345178-20345197 Msa1144390:intron 30.0%
TCATAATTGGTTACTGTAGA+AGG + chr7_4:20345236-20345255 Msa1144390:intron 30.0%
! TGAAGCTTTGTATCAAAGAA+TGG + chr7_4:20345331-20345350 Msa1144390:intron 30.0%
!!! TAGCATTCTGTTTTTGTCTT+TGG + chr7_4:20345490-20345509 Msa1144390:intron 30.0%
! TGGTCTTTCTTTTTCTTAGT+TGG + chr7_4:20345510-20345529 Msa1144390:intron 30.0%
! TTTTTGTTACCTTCTTCGTT+TGG + chr7_4:20345600-20345619 Msa1144390:intron 30.0%
!!! CGTTTCACTTTTTCTCTTTT+AGG + chr7_4:20345723-20345742 Msa1144390:intron 30.0%
!!! AACATGGGTTGTTTTTGAAA+TGG + chr7_4:20345747-20345766 Msa1144390:five_prime_UTR 30.0%
!!! ACATGGGTTGTTTTTGAAAT+GGG + chr7_4:20345748-20345767 Msa1144390:five_prime_UTR 30.0%
TTAATTGAGGTGGAAAAAGA+GGG + chr7_4:20345780-20345799 Msa1144390:five_prime_UTR 30.0%
GTTTGGAAGTGAGAAAAAAT+GGG + chr7_4:20345802-20345821 Msa1144390:exon 30.0%
!! AGAAGATTCTTGTGTTACTT+AGG + chr7_4:20345887-20345906 Msa1144390:CDS 30.0%
GAAATTTCCTTCTCATTCAA+AGG - chr7_4:20345919-20345938 None:intergenic 30.0%
!! GGTTTTGATACTTCTAAGTT+CGG - chr7_4:20346173-20346192 None:intergenic 30.0%
! AAAAGAGTACATCTAAGCTA+GGG - chr7_4:20346253-20346272 None:intergenic 30.0%
! TACTCTTTTCCCAATTTACA+TGG + chr7_4:20346264-20346283 Msa1144390:intron 30.0%
!! GTCAATTTTTATTTGCCTGT+TGG + chr7_4:20346328-20346347 Msa1144390:intron 30.0%
! TGTAAATTGATTTAGCCAAC+AGG - chr7_4:20346346-20346365 None:intergenic 30.0%
!! TTGTTTTTCTTCTCCAAACT+TGG + chr7_4:20346431-20346450 Msa1144390:intron 30.0%
CACCTATGTTAATCAAAAAG+TGG - chr7_4:20346756-20346775 None:intergenic 30.0%
!! TCAGCAAGTATTTTTGCATA+TGG + chr7_4:20346789-20346808 Msa1144390:intron 30.0%
!! CAGCAAGTATTTTTGCATAT+GGG + chr7_4:20346790-20346809 Msa1144390:intron 30.0%
! AACATAGTGCTATTAACACA+AGG + chr7_4:20346980-20346999 Msa1144390:intron 30.0%
AATTCCTTTACCTTCACAAA+AGG - chr7_4:20347311-20347330 None:intergenic 30.0%
! TTTTGTGAAGGTAAAGGAAT+TGG + chr7_4:20347310-20347329 Msa1144390:intron 30.0%
CTATTTAACATTGGATGCAA+TGG - chr7_4:20347379-20347398 None:intergenic 30.0%
TTGCATCCAATGTTAAATAG+CGG + chr7_4:20347379-20347398 Msa1144390:intron 30.0%
! ATCTTGAACTCTTTTCATTC+AGG - chr7_4:20347613-20347632 None:intergenic 30.0%
ATCTCACCAAATTATCAGAT+TGG + chr7_4:20347631-20347650 Msa1144390:CDS 30.0%
CACATACCAATCTGATAATT+TGG - chr7_4:20347640-20347659 None:intergenic 30.0%
CTCTATTAACTGAAGTCTAT+CGG - chr7_4:20347695-20347714 None:intergenic 30.0%
TAAATCCATCACTTATTCAG+GGG + chr7_4:20347817-20347836 Msa1144390:intron 30.0%
!! TCTGCAGAATTTTGTTGATT+TGG + chr7_4:20347905-20347924 Msa1144390:intron 30.0%
!!! AGAATTTTGTTGATTTGGCA+GGG + chr7_4:20347910-20347929 Msa1144390:intron 30.0%
TAAGTAAACTCCGGTTTATA+TGG - chr7_4:20347989-20348008 None:intergenic 30.0%
TAATGTAGTGATGTCTGATA+AGG + chr7_4:20348318-20348337 Msa1144390:CDS 30.0%
GAAAGATCAACAGATAGAAA+AGG + chr7_4:20348438-20348457 Msa1144390:CDS 30.0%
TTATCAACATGTAAGGAGTA+AGG - chr7_4:20348523-20348542 None:intergenic 30.0%
ATTCGTGTTATCAACATGTA+AGG - chr7_4:20348530-20348549 None:intergenic 30.0%
TCAGATGGATAAGGAAATTA+AGG + chr7_4:20348559-20348578 Msa1144390:intron 30.0%
ATCACAAATTAACTAGAAGC+CGG + chr7_4:20349265-20349284 Msa1144390:CDS 30.0%
! ATGGTTCAACAAGATTTTCA+AGG + chr7_4:20349421-20349440 Msa1144390:CDS 30.0%
TTCCTAGATATTAGCAAACA+TGG + chr7_4:20349919-20349938 Msa1144390:intron 30.0%
! ATCCATGTTTGCTAATATCT+AGG - chr7_4:20349924-20349943 None:intergenic 30.0%
! TCATTCTTTTCTGAATTGCA+GGG + chr7_4:20350030-20350049 Msa1144390:intron 30.0%
CCTAAACAAAAGAAAGAAGT+AGG - chr7_4:20350217-20350236 None:intergenic 30.0%
!! CCTACTTCTTTCTTTTGTTT+AGG + chr7_4:20350214-20350233 Msa1144390:CDS 30.0%
ACAAACAGATTCCATTTACA+TGG + chr7_4:20350242-20350261 Msa1144390:CDS 30.0%
!! TGTTGACATGTGTTTGTTTT+GGG + chr7_4:20350438-20350457 Msa1144390:intron 30.0%
AAATGCTTATGAAGCTTATG+CGG + chr7_4:20350493-20350512 Msa1144390:CDS 30.0%
GAAAAGGCTATTTAACGAAT+GGG + chr7_4:20350539-20350558 Msa1144390:CDS 30.0%
AAAAGGCTATTTAACGAATG+GGG + chr7_4:20350540-20350559 Msa1144390:CDS 30.0%
TGCTAATATACGTCTTCATT+AGG + chr7_4:20350818-20350837 Msa1144390:three_prime_UTR 30.0%
ATACAAACTACTCACTTTAG+AGG + chr7_4:20350914-20350933 Msa1144390:three_prime_UTR 30.0%
ACTATTAACCTACATTCTAG+AGG + chr7_4:20350986-20351005 Msa1144390:three_prime_UTR 30.0%
CTATTAACCTACATTCTAGA+GGG + chr7_4:20350987-20351006 Msa1144390:three_prime_UTR 30.0%
! TTTTAATCATTTTCCTCCTC+TGG + chr7_4:20351138-20351157 Msa1144390:three_prime_UTR 30.0%
! ACTTCTTTTTCTTCAGATCG+TGG + chr7_4:20344745-20344764 Msa1144390:five_prime_UTR 35.0%
! TGAATCATTTGAAACACAGG+AGG - chr7_4:20344981-20345000 None:intergenic 35.0%
TGAAAAACAGAGAACAAGGA+TGG + chr7_4:20345090-20345109 Msa1144390:five_prime_UTR 35.0%
! TTCTCAAGCATTGTTTAAGG+TGG + chr7_4:20345181-20345200 Msa1144390:intron 35.0%
AATTGGTTACTGTAGAAGGA+AGG + chr7_4:20345240-20345259 Msa1144390:intron 35.0%
GGTTTCAAATACATGAGTTC+TGG + chr7_4:20345261-20345280 Msa1144390:intron 35.0%
ATGGATTTACCAAACGAAGA+AGG - chr7_4:20345612-20345631 None:intergenic 35.0%
!! TGGGATTAGCTTGTTAATTG+AGG + chr7_4:20345767-20345786 Msa1144390:five_prime_UTR 35.0%
!! GATTAGCTTGTTAATTGAGG+TGG + chr7_4:20345770-20345789 Msa1144390:five_prime_UTR 35.0%
GTTAATTGAGGTGGAAAAAG+AGG + chr7_4:20345779-20345798 Msa1144390:five_prime_UTR 35.0%
GGTTTGGAAGTGAGAAAAAA+TGG + chr7_4:20345801-20345820 Msa1144390:exon 35.0%
!! TTCTTGTGTTACTTAGGCTT+AGG + chr7_4:20345893-20345912 Msa1144390:CDS 35.0%
TGCTAATGAATCTGCAGATT+GGG + chr7_4:20345939-20345958 Msa1144390:CDS 35.0%
TTGATACTTCTAAGTTCGGT+CGG - chr7_4:20346169-20346188 None:intergenic 35.0%
! GAAAAGAGTACATCTAAGCT+AGG - chr7_4:20346254-20346273 None:intergenic 35.0%
!! TTTTGTTGTGATTGGCACTT+TGG + chr7_4:20346592-20346611 Msa1144390:intron 35.0%
GTTAATCAAAAAGTGGAAGG+TGG - chr7_4:20346749-20346768 None:intergenic 35.0%
CAGTGGAAAGACATATACTA+TGG + chr7_4:20346821-20346840 Msa1144390:CDS 35.0%
GGAAAGACATATACTATGGT+TGG + chr7_4:20346825-20346844 Msa1144390:CDS 35.0%
!! ATTTAAAAGGCATTCACCTC+AGG - chr7_4:20347134-20347153 None:intergenic 35.0%
! GTTTTCCCTTTTTGTTAGAG+AGG + chr7_4:20347220-20347239 Msa1144390:intron 35.0%
!! TCTGTAAGTTTCTCTAGAAC+GGG - chr7_4:20347247-20347266 None:intergenic 35.0%
! CTCTGTAAGTTTCTCTAGAA+CGG - chr7_4:20347248-20347267 None:intergenic 35.0%
CTTTACCTTCACAAAAGGAT+AGG - chr7_4:20347306-20347325 None:intergenic 35.0%
! CTATCCTTTTGTGAAGGTAA+AGG + chr7_4:20347304-20347323 Msa1144390:intron 35.0%
TAATTGCAGATCGCAGAAAA+TGG - chr7_4:20347533-20347552 None:intergenic 35.0%
AGAACTTTCAATGGTCTGAA+AGG - chr7_4:20347730-20347749 None:intergenic 35.0%
ACTTACTACACTAGCTGATA+GGG - chr7_4:20347787-20347806 None:intergenic 35.0%
AACTTACTACACTAGCTGAT+AGG - chr7_4:20347788-20347807 None:intergenic 35.0%
TTTATCCCCTGAATAAGTGA+TGG - chr7_4:20347825-20347844 None:intergenic 35.0%
ATTCAGGGGATAAAATAGTC+AGG + chr7_4:20347831-20347850 Msa1144390:intron 35.0%
TTCAGGGGATAAAATAGTCA+GGG + chr7_4:20347832-20347851 Msa1144390:intron 35.0%
!!! CAGAATTTTGTTGATTTGGC+AGG + chr7_4:20347909-20347928 Msa1144390:intron 35.0%
AAGAAGGTTGCCATATAAAC+CGG + chr7_4:20347976-20347995 Msa1144390:CDS 35.0%
TCGAAAGAGTAAGTAAACTC+CGG - chr7_4:20347998-20348017 None:intergenic 35.0%
TAATGTGTCTGAATGCAGTA+AGG + chr7_4:20348111-20348130 Msa1144390:intron 35.0%
AATGTGTCTGAATGCAGTAA+GGG + chr7_4:20348112-20348131 Msa1144390:intron 35.0%
TACATTAACCTGTGCTTTAG+TGG - chr7_4:20348305-20348324 None:intergenic 35.0%
! TTTTTGCAATTGCTTGACCA+AGG - chr7_4:20348344-20348363 None:intergenic 35.0%
CAAGCAATTGCAAAAAGAGT+TGG + chr7_4:20348348-20348367 Msa1144390:CDS 35.0%
CAAAGCTACATAATCAGTGT+TGG - chr7_4:20348410-20348429 None:intergenic 35.0%
TTTGGCAGGAAGAAGATTTA+TGG + chr7_4:20348779-20348798 Msa1144390:intron 35.0%
TTGGCAGGAAGAAGATTTAT+GGG + chr7_4:20348780-20348799 Msa1144390:intron 35.0%
AACTCTCTAATGCGTATGTT+GGG - chr7_4:20348847-20348866 None:intergenic 35.0%
CTGTCTCCACTATTATATTG+AGG - chr7_4:20348877-20348896 None:intergenic 35.0%
! CAATATAATAGTGGAGACAG+TGG + chr7_4:20348877-20348896 Msa1144390:CDS 35.0%
GAGTAGAATTGAATGATGTC+CGG + chr7_4:20348977-20348996 Msa1144390:intron 35.0%
CTTCTTTGCAGTATTCATCA+AGG - chr7_4:20349044-20349063 None:intergenic 35.0%
TCAAATGTGTAGACATTTCC+TGG - chr7_4:20349182-20349201 None:intergenic 35.0%
CATGTAGAGATTGTTCATCA+TGG - chr7_4:20349215-20349234 None:intergenic 35.0%
ATTTGACATGTTTCCTGACA+TGG - chr7_4:20349238-20349257 None:intergenic 35.0%
!!! CCTTTTTCAAACCCATTGAA+TGG - chr7_4:20349348-20349367 None:intergenic 35.0%
! CCATTCAATGGGTTTGAAAA+AGG + chr7_4:20349345-20349364 Msa1144390:CDS 35.0%
AACTTTCTCCATAAACCATC+TGG - chr7_4:20349384-20349403 None:intergenic 35.0%
AACGATTCTCAGTCTTCTAT+TGG + chr7_4:20349444-20349463 Msa1144390:CDS 35.0%
!! TATGAAAAGCAGCTTGTTGA+TGG + chr7_4:20349579-20349598 Msa1144390:CDS 35.0%
CATCAAGATGTAGATTGTAG+TGG - chr7_4:20349991-20350010 None:intergenic 35.0%
CTGCAATTCAGAAAAGAATG+AGG - chr7_4:20350031-20350050 None:intergenic 35.0%
! CTCATTCTTTTCTGAATTGC+AGG + chr7_4:20350029-20350048 Msa1144390:intron 35.0%
AACAGATTCCATTTACATGG+AGG + chr7_4:20350245-20350264 Msa1144390:CDS 35.0%
TTGAAGTTAACGTGATTGTC+TGG - chr7_4:20350338-20350357 None:intergenic 35.0%
AGACAATCACGTTAACTTCA+AGG + chr7_4:20350337-20350356 Msa1144390:CDS 35.0%
AAACAAACACATGTCAACAC+AGG - chr7_4:20350437-20350456 None:intergenic 35.0%
!! GTGTTGACATGTGTTTGTTT+TGG + chr7_4:20350437-20350456 Msa1144390:intron 35.0%
GGAAAAGGCTATTTAACGAA+TGG + chr7_4:20350538-20350557 Msa1144390:CDS 35.0%
TATCAGTGTTGCACCATAAA+CGG - chr7_4:20350608-20350627 None:intergenic 35.0%
! GTATATTAGCAATGCCACTT+TGG - chr7_4:20350809-20350828 None:intergenic 35.0%
!! AATACAACCCTCTAGAATGT+AGG - chr7_4:20350997-20351016 None:intergenic 35.0%
ATTGTATCGTATCGCCATTA+TGG + chr7_4:20351019-20351038 Msa1144390:three_prime_UTR 35.0%
CTGGTACAACATAACCATAA+TGG - chr7_4:20351036-20351055 None:intergenic 35.0%
!! ACAAACCTTAATTTGCAGCA+AGG - chr7_4:20351093-20351112 None:intergenic 35.0%
!!! TGTTTTAATATGTCCAGAGG+AGG - chr7_4:20351154-20351173 None:intergenic 35.0%
!!! CGATGTTTTAATATGTCCAG+AGG - chr7_4:20351157-20351176 None:intergenic 35.0%
! TCTTTATGATCTCGGTGTGT+CGG + chr7_4:20344874-20344893 Msa1144390:five_prime_UTR 40.0%
!! AAGGTAGGACCTGTTTTGTT+AGG + chr7_4:20345132-20345151 Msa1144390:intron 40.0%
!! AGGTAGGACCTGTTTTGTTA+GGG + chr7_4:20345133-20345152 Msa1144390:intron 40.0%
TTACTGGTCCCTAACAAAAC+AGG - chr7_4:20345144-20345163 None:intergenic 40.0%
! CAAATACATGAGTTCTGGTG+TGG + chr7_4:20345266-20345285 Msa1144390:intron 40.0%
GAAAAAATGGGAGCTATTGC+TGG + chr7_4:20345814-20345833 Msa1144390:exon 40.0%
TGGAGAAGAGTTGTCGAAAT+GGG + chr7_4:20345834-20345853 Msa1144390:CDS 40.0%
TCGAAATGGGAGAAGATGAA+TGG + chr7_4:20345847-20345866 Msa1144390:CDS 40.0%
GAGAAGATGAATGGAGTTAG+TGG + chr7_4:20345856-20345875 Msa1144390:CDS 40.0%
CTGCTAATGAATCTGCAGAT+TGG + chr7_4:20345938-20345957 Msa1144390:CDS 40.0%
AACCTTCACGCAATGTATTC+CGG - chr7_4:20345993-20346012 None:intergenic 40.0%
TTTCCAAGTGCCTACACATT+TGG + chr7_4:20346018-20346037 Msa1144390:CDS 40.0%
TTACCAAATGTGTAGGCACT+TGG - chr7_4:20346024-20346043 None:intergenic 40.0%
TGATACTTCTAAGTTCGGTC+GGG - chr7_4:20346168-20346187 None:intergenic 40.0%
AGTCTTAATCCTCAGTTCCA+GGG - chr7_4:20346202-20346221 None:intergenic 40.0%
! CTTTGGCAGACAGAGTATTT+CGG + chr7_4:20346609-20346628 Msa1144390:intron 40.0%
! TTTGGCAGACAGAGTATTTC+GGG + chr7_4:20346610-20346629 Msa1144390:intron 40.0%
TGAAACAAGGCAGGTATATG+AGG + chr7_4:20346640-20346659 Msa1144390:CDS 40.0%
GAAATCGCTCTTTCAGTAGT+CGG + chr7_4:20346674-20346693 Msa1144390:CDS 40.0%
GCTTCAGTATCATTGTTCTC+TGG + chr7_4:20346939-20346958 Msa1144390:intron 40.0%
!! CGTTCTAGAGAAACTTACAG+AGG + chr7_4:20347246-20347265 Msa1144390:CDS 40.0%
ATAGCGCCGCTATTTAACAT+TGG - chr7_4:20347388-20347407 None:intergenic 40.0%
TCAGGGGATAAAATAGTCAG+GGG + chr7_4:20347833-20347852 Msa1144390:intron 40.0%
AGAAGTTACCACTAAAGCAC+AGG + chr7_4:20348294-20348313 Msa1144390:CDS 40.0%
AATTGCAAAAAGAGTTGGCC+AGG + chr7_4:20348353-20348372 Msa1144390:CDS 40.0%
! AGCTACATAATCAGTGTTGG+AGG - chr7_4:20348407-20348426 None:intergenic 40.0%
AACGTGATCTTGCTGAATCA+AGG + chr7_4:20348594-20348613 Msa1144390:CDS 40.0%
TCTTGCTGAATCAAGGATTG+AGG + chr7_4:20348601-20348620 Msa1144390:CDS 40.0%
GAACTCTCTAATGCGTATGT+TGG - chr7_4:20348848-20348867 None:intergenic 40.0%
!! GACAGTGGAAGTATTCAAGA+TGG + chr7_4:20348892-20348911 Msa1144390:CDS 40.0%
!! GATTTGGCTTTGACAGTATC+TGG + chr7_4:20349138-20349157 Msa1144390:CDS 40.0%
! ATAAACCATCTGGTCTTCCA+GGG - chr7_4:20349374-20349393 None:intergenic 40.0%
! AGCATCCATACTTTTGTTGC+TGG + chr7_4:20349531-20349550 Msa1144390:CDS 40.0%
! GCATCCATACTTTTGTTGCT+GGG + chr7_4:20349532-20349551 Msa1144390:CDS 40.0%
TCATCCCAGCAACAAAAGTA+TGG - chr7_4:20349539-20349558 None:intergenic 40.0%
TGTTGCTGGGATGAAAGAAA+TGG + chr7_4:20349545-20349564 Msa1144390:CDS 40.0%
GTTACGACAAGTCCTATATC+TGG - chr7_4:20349833-20349852 None:intergenic 40.0%
GACACAGATACGATACTACA+TGG - chr7_4:20349880-20349899 None:intergenic 40.0%
GCTAATATCTAGGAAACCCA+GGG - chr7_4:20349914-20349933 None:intergenic 40.0%
TGCTAATATCTAGGAAACCC+AGG - chr7_4:20349915-20349934 None:intergenic 40.0%
AGGAGACAGATAGAAAACTG+AGG + chr7_4:20350055-20350074 Msa1144390:CDS 40.0%
CTGAGGAATGTGAAAGATGT+AGG + chr7_4:20350072-20350091 Msa1144390:CDS 40.0%
AAGAAAGAAGTAGGTCCTGT+GGG - chr7_4:20350208-20350227 None:intergenic 40.0%
AAAGAAAGAAGTAGGTCCTG+TGG - chr7_4:20350209-20350228 None:intergenic 40.0%
AAGCTCTACCTCCATGTAAA+TGG - chr7_4:20350256-20350275 None:intergenic 40.0%
TTATGAAGCTTATGCGGAAG+AGG + chr7_4:20350499-20350518 Msa1144390:CDS 40.0%
! TTTCTGAGGAAGAGAGGAAA+AGG + chr7_4:20350523-20350542 Msa1144390:CDS 40.0%
CTATTTAACGAATGGGGCAT+TGG + chr7_4:20350546-20350565 Msa1144390:CDS 40.0%
TTGGATTGAATTCAAAGCGC+AGG + chr7_4:20350565-20350584 Msa1144390:CDS 40.0%
AAGTCCAAACATCTCCTTGA+GGG - chr7_4:20350697-20350716 None:intergenic 40.0%
TAAGTCCAAACATCTCCTTG+AGG - chr7_4:20350698-20350717 None:intergenic 40.0%
!!! TTTGTTTTGCGTCTCCAAAG+TGG + chr7_4:20350792-20350811 Msa1144390:three_prime_UTR 40.0%
CAATGGAGAGACACTTGTTT+CGG - chr7_4:20350949-20350968 None:intergenic 40.0%
AGACAGTCAAATTCGTCATC+TGG - chr7_4:20351055-20351074 None:intergenic 40.0%
TTCCTCCTTGCTGCAAATTA+AGG + chr7_4:20351085-20351104 Msa1144390:three_prime_UTR 40.0%
!! AACCTTAATTTGCAGCAAGG+AGG - chr7_4:20351090-20351109 None:intergenic 40.0%
TGAGGTGGAAAAAGAGGGTT+TGG + chr7_4:20345785-20345804 Msa1144390:five_prime_UTR 45.0%
CTGGAGAAGAGTTGTCGAAA+TGG + chr7_4:20345833-20345852 Msa1144390:CDS 45.0%
GCTTAGGCCTTTGAATGAGA+AGG + chr7_4:20345909-20345928 Msa1144390:CDS 45.0%
TACCGGAATACATTGCGTGA+AGG + chr7_4:20345988-20346007 Msa1144390:CDS 45.0%
GAGTCTTAATCCTCAGTTCC+AGG - chr7_4:20346203-20346222 None:intergenic 45.0%
! TTGGCAGACAGAGTATTTCG+GGG + chr7_4:20346611-20346630 Msa1144390:intron 45.0%
ACAAGGCAGGTATATGAGGA+AGG + chr7_4:20346644-20346663 Msa1144390:CDS 45.0%
CGGGTCCTCTCTAACAAAAA+GGG - chr7_4:20347228-20347247 None:intergenic 45.0%
ACGGGTCCTCTCTAACAAAA+AGG - chr7_4:20347229-20347248 None:intergenic 45.0%
ACTTACAGAGGAGACTCTAC+AGG + chr7_4:20347258-20347277 Msa1144390:CDS 45.0%
AGAGGAGACTCTACAGGATT+GGG + chr7_4:20347264-20347283 Msa1144390:CDS 45.0%
! GAGCTCCTATCCTTTTGTGA+AGG + chr7_4:20347298-20347317 Msa1144390:CDS 45.0%
GTCTCTGAGCTGCAAGAATA+AGG - chr7_4:20347574-20347593 None:intergenic 45.0%
AGACCATTGAAAGTTCTGCC+AGG + chr7_4:20347733-20347752 Msa1144390:intron 45.0%
GACCATTGAAAGTTCTGCCA+GGG + chr7_4:20347734-20347753 Msa1144390:intron 45.0%
TTCCCTGGCAGAACTTTCAA+TGG - chr7_4:20347739-20347758 None:intergenic 45.0%
AAGTTCTGCCAGGGAATTTC+TGG + chr7_4:20347743-20347762 Msa1144390:CDS 45.0%
AGTTCTGCCAGGGAATTTCT+GGG + chr7_4:20347744-20347763 Msa1144390:CDS 45.0%
TACTACACTAGCTGATAGGG+TGG - chr7_4:20347784-20347803 None:intergenic 45.0%
CATCTCAGGTATCATCAGCT+GGG + chr7_4:20347943-20347962 Msa1144390:CDS 45.0%
ATCTCAGGTATCATCAGCTG+GGG + chr7_4:20347944-20347963 Msa1144390:CDS 45.0%
CAACCTCAGCTTACGAATGA+CGG - chr7_4:20348021-20348040 None:intergenic 45.0%
GAATGCAGTAAGGGAAGACA+TGG + chr7_4:20348121-20348140 Msa1144390:intron 45.0%
AGTGATGTCTGATAAGGCCT+TGG + chr7_4:20348324-20348343 Msa1144390:CDS 45.0%
!! TTTTAACTCGCCTTCCAACC+TGG - chr7_4:20348374-20348393 None:intergenic 45.0%
! TAATCAGTGTTGGAGGTAGC+AGG - chr7_4:20348400-20348419 None:intergenic 45.0%
TCAGAGTCCTCAAGCATTTG+TGG + chr7_4:20348820-20348839 Msa1144390:CDS 45.0%
AGAAGTTCGATGTGTCGAGT+TGG + chr7_4:20349059-20349078 Msa1144390:CDS 45.0%
GATCCGTCCTTAAGTGACAA+CGG + chr7_4:20349114-20349133 Msa1144390:CDS 45.0%
ATCCGTCCTTAAGTGACAAC+GGG + chr7_4:20349115-20349134 Msa1144390:CDS 45.0%
! CAAATCCCCGTTGTCACTTA+AGG - chr7_4:20349124-20349143 None:intergenic 45.0%
CTTAAGTGACAACGGGGATT+TGG + chr7_4:20349122-20349141 Msa1144390:CDS 45.0%
!! TTGGCTTTGACAGTATCTGG+AGG + chr7_4:20349141-20349160 Msa1144390:CDS 45.0%
!! TGGCTTTGACAGTATCTGGA+GGG + chr7_4:20349142-20349161 Msa1144390:CDS 45.0%
ACAGTATCTGGAGGGGAAAA+TGG + chr7_4:20349150-20349169 Msa1144390:CDS 45.0%
CAATCTCTACATGCCATGTC+AGG + chr7_4:20349222-20349241 Msa1144390:CDS 45.0%
AACTAGAAGCCGGAGTTGTT+CGG + chr7_4:20349275-20349294 Msa1144390:CDS 45.0%
TCTCCATTTCTCCTGTCTCA+GGG - chr7_4:20349320-20349339 None:intergenic 45.0%
GGGTTTGAAAAAGGATTCCC+TGG + chr7_4:20349354-20349373 Msa1144390:CDS 45.0%
! CATAAACCATCTGGTCTTCC+AGG - chr7_4:20349375-20349394 None:intergenic 45.0%
CTGGAAGACCAGATGGTTTA+TGG + chr7_4:20349373-20349392 Msa1144390:CDS 45.0%
TTCTATTGGAAGTCCGTCAG+TGG + chr7_4:20349458-20349477 Msa1144390:CDS 45.0%
ATCTCAAGCTGTTGCCTCTA+AGG - chr7_4:20349488-20349507 None:intergenic 45.0%
! CTTGAGATCATCTGGTGATG+AGG + chr7_4:20349500-20349519 Msa1144390:CDS 45.0%
!! AAAGCAGCTTGTTGATGGTC+AGG + chr7_4:20349584-20349603 Msa1144390:CDS 45.0%
ATCGTATCTGTGTCCGTACT+AGG + chr7_4:20349886-20349905 Msa1144390:intron 45.0%
! CTTTTCTGAATTGCAGGGTC+AGG + chr7_4:20350035-20350054 Msa1144390:intron 45.0%
!! TGTAGGTGTTGATCCAATGC+AGG + chr7_4:20350089-20350108 Msa1144390:CDS 45.0%
AACTGCAGAGACCAGTCTAA+AGG - chr7_4:20350129-20350148 None:intergenic 45.0%
GCTATGTACCATTAACCCAC+AGG + chr7_4:20350190-20350209 Msa1144390:CDS 45.0%
! AAGTAGGTCCTGTGGGTTAA+TGG - chr7_4:20350201-20350220 None:intergenic 45.0%
! CTAGTGAGGTTTTCAGAGCA+GGG + chr7_4:20350666-20350685 Msa1144390:CDS 45.0%
TAACACGGCGAAGCTATTCA+TGG + chr7_4:20350733-20350752 Msa1144390:CDS 45.0%
! TCATTAGGAGTGTGTACAGC+AGG + chr7_4:20350833-20350852 Msa1144390:three_prime_UTR 45.0%
! CATTAGGAGTGTGTACAGCA+GGG + chr7_4:20350834-20350853 Msa1144390:three_prime_UTR 45.0%
TTACGTGTCAGTGTCCTGTC+TGG - chr7_4:20345057-20345076 None:intergenic 50.0%
CTTCTAAGTTCGGTCGGGTT+TGG - chr7_4:20346163-20346182 None:intergenic 50.0%
GTATCAAAACCCCTTCTCCC+TGG + chr7_4:20346182-20346201 Msa1144390:intron 50.0%
ATCCTCAGTTCCAGGGAGAA+GGG - chr7_4:20346195-20346214 None:intergenic 50.0%
AATCCTCAGTTCCAGGGAGA+AGG - chr7_4:20346196-20346215 None:intergenic 50.0%
TTCGGGGTGACTGTGAAACA+AGG + chr7_4:20346627-20346646 Msa1144390:CDS 50.0%
ATCGCTCTTTCAGTAGTCGG+TGG + chr7_4:20346677-20346696 Msa1144390:CDS 50.0%
GCATATGGGCAAACAAGCAG+TGG + chr7_4:20346804-20346823 Msa1144390:CDS 50.0%
! GCACTGACAACACTCCACTT+AGG + chr7_4:20347096-20347115 Msa1144390:CDS 50.0%
GGATCATCACGCAACCTAAG+TGG - chr7_4:20347113-20347132 None:intergenic 50.0%
TAGGTTGCGTGATGATCCTG+AGG + chr7_4:20347115-20347134 Msa1144390:CDS 50.0%
CAGAGGAGACTCTACAGGAT+TGG + chr7_4:20347263-20347282 Msa1144390:CDS 50.0%
GAGGAGACTCTACAGGATTG+GGG + chr7_4:20347265-20347284 Msa1144390:CDS 50.0%
AGGAGACTCTACAGGATTGG+GGG + chr7_4:20347266-20347285 Msa1144390:CDS 50.0%
CTTGCAGCTCAGAGACAAGT+AGG + chr7_4:20347578-20347597 Msa1144390:intron 50.0%
TCCTTTGCCCAGAAATTCCC+TGG - chr7_4:20347754-20347773 None:intergenic 50.0%
GCATCTCAGGTATCATCAGC+TGG + chr7_4:20347942-20347961 Msa1144390:CDS 50.0%
GCTGGGGTGAGATTGAAAGA+AGG + chr7_4:20347960-20347979 Msa1144390:CDS 50.0%
GAGGTTGTTCACTTCACCCT+CGG + chr7_4:20348034-20348053 Msa1144390:intron 50.0%
ATACTGCAGCCTTGCTTAGG+TGG + chr7_4:20348178-20348197 Msa1144390:CDS 50.0%
CTAGCATTGCCACCTAAGCA+AGG - chr7_4:20348190-20348209 None:intergenic 50.0%
TTTGCACTTTGAGCCCTGCA+CGG + chr7_4:20348221-20348240 Msa1144390:CDS 50.0%
GTTCAACATGACTCCGTGCA+GGG - chr7_4:20348237-20348256 None:intergenic 50.0%
TGTTCAACATGACTCCGTGC+AGG - chr7_4:20348238-20348257 None:intergenic 50.0%
GCAAAAAGAGTTGGCCAGGT+TGG + chr7_4:20348357-20348376 Msa1144390:CDS 50.0%
! AAAGAGTTGGCCAGGTTGGA+AGG + chr7_4:20348361-20348380 Msa1144390:CDS 50.0%
!! GATTGAGGATTTGCTGCGCA+TGG + chr7_4:20348616-20348635 Msa1144390:CDS 50.0%
GTTGGGACCACAAATGCTTG+AGG - chr7_4:20348830-20348849 None:intergenic 50.0%
TCCGTCCTTAAGTGACAACG+GGG + chr7_4:20349116-20349135 Msa1144390:CDS 50.0%
! TCCCCGTTGTCACTTAAGGA+CGG - chr7_4:20349120-20349139 None:intergenic 50.0%
! GGCTTTGACAGTATCTGGAG+GGG + chr7_4:20349143-20349162 Msa1144390:CDS 50.0%
AGGGGAAAATGGAACAAGCC+AGG + chr7_4:20349161-20349180 Msa1144390:CDS 50.0%
TGTGATGCTCCGAACAACTC+CGG - chr7_4:20349287-20349306 None:intergenic 50.0%
TTCCCCTGAGACAGGAGAAA+TGG + chr7_4:20349314-20349333 Msa1144390:CDS 50.0%
CTCCATTTCTCCTGTCTCAG+GGG - chr7_4:20349319-20349338 None:intergenic 50.0%
CTCTCCATTTCTCCTGTCTC+AGG - chr7_4:20349321-20349340 None:intergenic 50.0%
CTGAGACAGGAGAAATGGAG+AGG + chr7_4:20349319-20349338 Msa1144390:CDS 50.0%
ATGGAGAGGACGCCATTCAA+TGG + chr7_4:20349333-20349352 Msa1144390:CDS 50.0%
TGGAGAGGACGCCATTCAAT+GGG + chr7_4:20349334-20349353 Msa1144390:CDS 50.0%
!! CCTCTAAGGTCATCCACTGA+CGG - chr7_4:20349474-20349493 None:intergenic 50.0%
GGCAACAGCTTGAGATCATC+TGG + chr7_4:20349492-20349511 Msa1144390:CDS 50.0%
! GAAACCCAGGGTACCTAGTA+CGG - chr7_4:20349902-20349921 None:intergenic 50.0%
!! AGGTGTTGATCCAATGCAGG+AGG + chr7_4:20350092-20350111 Msa1144390:CDS 50.0%
CACCAGGAACTCCTTTAGAC+TGG + chr7_4:20350115-20350134 Msa1144390:CDS 50.0%
GACCAGTCTAAAGGAGTTCC+TGG - chr7_4:20350120-20350139 None:intergenic 50.0%
! ACTGGTCTCTGCAGTTCAAG+AGG + chr7_4:20350133-20350152 Msa1144390:CDS 50.0%
TCTGGCTGTCTTTCTCAGAC+TGG - chr7_4:20350320-20350339 None:intergenic 50.0%
GACACAGTGTGAGAGCTCTT+CGG + chr7_4:20350460-20350479 Msa1144390:intron 50.0%
TATGCGGAAGAGGCTTTCTG+AGG + chr7_4:20350509-20350528 Msa1144390:CDS 50.0%
! AGAGGCTTTCTGAGGAAGAG+AGG + chr7_4:20350517-20350536 Msa1144390:CDS 50.0%
TGCAGCTAGCAGACCGTTTA+TGG + chr7_4:20350592-20350611 Msa1144390:CDS 50.0%
TTGCAGCACTCTGCATTACG+TGG - chr7_4:20350635-20350654 None:intergenic 50.0%
!! AGAGTGCTGCAATAGTTGCG+AGG + chr7_4:20350643-20350662 Msa1144390:CDS 50.0%
CAATAGTTGCGAGGCTAGTG+AGG + chr7_4:20350652-20350671 Msa1144390:CDS 50.0%
! GCTAGTGAGGTTTTCAGAGC+AGG + chr7_4:20350665-20350684 Msa1144390:CDS 50.0%
GCTTCACACCTCAGCTAACA+CGG + chr7_4:20350718-20350737 Msa1144390:CDS 50.0%
CTGTCTGGTGTCTGGTGTCT+GGG - chr7_4:20345042-20345061 None:intergenic 55.0%
TCAGTGTCCTGTCTGGTGTC+TGG - chr7_4:20345050-20345069 None:intergenic 55.0%
TCCTCAGTTCCAGGGAGAAG+GGG - chr7_4:20346194-20346213 None:intergenic 55.0%
GGGTGACTGTGAAACAAGGC+AGG + chr7_4:20346631-20346650 Msa1144390:CDS 55.0%
GCGCTATAGCGCTGCAGAAT+TGG + chr7_4:20347401-20347420 Msa1144390:intron 55.0%
! GCCAGGGAATTTCTGGGCAA+AGG + chr7_4:20347750-20347769 Msa1144390:CDS 55.0%
CGACCGTCATTCGTAAGCTG+AGG + chr7_4:20348015-20348034 Msa1144390:CDS 55.0%
CGCATACTGCAGCCTTGCTT+AGG + chr7_4:20348175-20348194 Msa1144390:CDS 55.0%
!! TGAGGATTTGCTGCGCATGG+TGG + chr7_4:20348619-20348638 Msa1144390:CDS 55.0%
!! GAGGATTTGCTGCGCATGGT+GGG + chr7_4:20348620-20348639 Msa1144390:CDS 55.0%
!! AGGATTTGCTGCGCATGGTG+GGG + chr7_4:20348621-20348640 Msa1144390:CDS 55.0%
ATGACTGCTTCCCCTGAGAC+AGG + chr7_4:20349306-20349325 Msa1144390:CDS 55.0%
GGATTCCCTGGAAGACCAGA+TGG + chr7_4:20349366-20349385 Msa1144390:CDS 55.0%
CCGTCAGTGGATGACCTTAG+AGG + chr7_4:20349471-20349490 Msa1144390:CDS 55.0%
TGTGTCCGTACTAGGTACCC+TGG + chr7_4:20349894-20349913 Msa1144390:intron 55.0%
GTGTCCGTACTAGGTACCCT+GGG + chr7_4:20349895-20349914 Msa1144390:intron 55.0%
ACAGTGTGAGAGCTCTTCGG+CGG + chr7_4:20350463-20350482 Msa1144390:intron 55.0%
CGAGCCCTCAAGGAGATGTT+TGG + chr7_4:20350690-20350709 Msa1144390:CDS 55.0%
TAGCTTCGCCGTGTTAGCTG+AGG - chr7_4:20350729-20350748 None:intergenic 55.0%
CCTGTCTGGTGTCTGGTGTC+TGG - chr7_4:20345043-20345062 None:intergenic 60.0%
CCAGACACCAGACACCAGAC+AGG + chr7_4:20345040-20345059 Msa1144390:five_prime_UTR 60.0%
ACCCCTTCTCCCTGGAACTG+AGG + chr7_4:20346190-20346209 Msa1144390:intron 60.0%
!! GATCCAATGCAGGAGGCACC+AGG + chr7_4:20350099-20350118 Msa1144390:CDS 60.0%
GTTCCTGGTGCCTCCTGCAT+TGG - chr7_4:20350105-20350124 None:intergenic 60.0%
CAGTGTGAGAGCTCTTCGGC+GGG + chr7_4:20350464-20350483 Msa1144390:intron 60.0%
AGGGAGCGAGCGTGCATCTC+AGG + chr7_4:20347929-20347948 Msa1144390:CDS 65.0%
AGAGCAGGGACGAGCCCTCA+AGG + chr7_4:20350680-20350699 Msa1144390:CDS 65.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 20344731 20351211 20344731 ID=Msa1144390;Name=Msa1144390
chr7_4 mRNA 20344731 20351211 20344731 ID=Msa1144390-mRNA-1;Parent=Msa1144390;Name=Msa1144390-mRNA-1;_AED=0.10;_eAED=0.10;_QI=479|1|1|1|0.92|0.86|15|429|873
chr7_4 exon 20344731 20345134 20344731 ID=Msa1144390-mRNA-1:exon:4870;Parent=Msa1144390-mRNA-1
chr7_4 exon 20345745 20346039 20345745 ID=Msa1144390-mRNA-1:exon:4871;Parent=Msa1144390-mRNA-1
chr7_4 exon 20346618 20346707 20346618 ID=Msa1144390-mRNA-1:exon:4872;Parent=Msa1144390-mRNA-1
chr7_4 exon 20346793 20346893 20346793 ID=Msa1144390-mRNA-1:exon:4873;Parent=Msa1144390-mRNA-1
chr7_4 exon 20347023 20347136 20347023 ID=Msa1144390-mRNA-1:exon:4874;Parent=Msa1144390-mRNA-1
chr7_4 exon 20347238 20347319 20347238 ID=Msa1144390-mRNA-1:exon:4875;Parent=Msa1144390-mRNA-1
chr7_4 exon 20347585 20347652 20347585 ID=Msa1144390-mRNA-1:exon:4876;Parent=Msa1144390-mRNA-1
chr7_4 exon 20347735 20347800 20347735 ID=Msa1144390-mRNA-1:exon:4877;Parent=Msa1144390-mRNA-1
chr7_4 exon 20347912 20348036 20347912 ID=Msa1144390-mRNA-1:exon:4878;Parent=Msa1144390-mRNA-1
chr7_4 exon 20348129 20348459 20348129 ID=Msa1144390-mRNA-1:exon:4879;Parent=Msa1144390-mRNA-1
chr7_4 exon 20348563 20348664 20348563 ID=Msa1144390-mRNA-1:exon:4880;Parent=Msa1144390-mRNA-1
chr7_4 exon 20348787 20348913 20348787 ID=Msa1144390-mRNA-1:exon:4881;Parent=Msa1144390-mRNA-1
chr7_4 exon 20349034 20349605 20349034 ID=Msa1144390-mRNA-1:exon:4882;Parent=Msa1144390-mRNA-1
chr7_4 exon 20350051 20350358 20350051 ID=Msa1144390-mRNA-1:exon:4883;Parent=Msa1144390-mRNA-1
chr7_4 exon 20350467 20351211 20350467 ID=Msa1144390-mRNA-1:exon:4884;Parent=Msa1144390-mRNA-1
chr7_4 five_prime_UTR 20344731 20345134 20344731 ID=Msa1144390-mRNA-1:five_prime_utr;Parent=Msa1144390-mRNA-1
chr7_4 five_prime_UTR 20345745 20345819 20345745 ID=Msa1144390-mRNA-1:five_prime_utr;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20345820 20346039 20345820 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20346618 20346707 20346618 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20346793 20346893 20346793 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20347023 20347136 20347023 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20347238 20347319 20347238 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20347585 20347652 20347585 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20347735 20347800 20347735 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20347912 20348036 20347912 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20348129 20348459 20348129 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20348563 20348664 20348563 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20348787 20348913 20348787 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20349034 20349605 20349034 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20350051 20350358 20350051 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 CDS 20350467 20350782 20350467 ID=Msa1144390-mRNA-1:cds;Parent=Msa1144390-mRNA-1
chr7_4 three_prime_UTR 20350783 20351211 20350783 ID=Msa1144390-mRNA-1:three_prime_utr;Parent=Msa1144390-mRNA-1
Gene Sequence

>Msa1144390

ATGGGAGCTATTGCTGGAGAAGAGTTGTCGAAATGGGAGAAGATGAATGGAGTTAGTGGTTGTGAAGAGAAGATTCTTGTGTTACTTAGGCTTAGGCCTTTGAATGAGAAGGAAATTTCTGCTAATGAATCTGCAGATTGGGAATGTATTAATGATACTACAATTTTGTACCGGAATACATTGCGTGAAGGTTCTACGTTTCCAAGTGCCTACACATTTGACAGAGTATTTCGGGGTGACTGTGAAACAAGGCAGGTATATGAGGAAGGAGCTAGAGAAATCGCTCTTTCAGTAGTCGGTGGAATTAACTCAAGTATTTTTGCATATGGGCAAACAAGCAGTGGAAAGACATATACTATGGTTGGAATAACTGAATTTGCTGTAGCAGATATTTTTGACTATGCAAAAAGGCATGAAGAAAGAGCATTTGCATTGAAGTTCTCAGCAATTGAGATTTACAATGAAATTGTTAGAGATCTTCTCAGCACTGACAACACTCCACTTAGGTTGCGTGATGATCCTGAGAGAGGACCCGTTCTAGAGAAACTTACAGAGGAGACTCTACAGGATTGGGGGCATTTTCAAGAGCTCCTATCCTTTTGTGAAGCTCAGAGACAAGTAGGAGAGACATACCTGAATGAAAAGAGTTCAAGATCTCACCAAATTATCAGATTGACCATTGAAAGTTCTGCCAGGGAATTTCTGGGCAAAGGAAACTCAACCACCCTATCAGCTAGTGTAAATTTTGTTGATTTGGCAGGGAGCGAGCGTGCATCTCAGGTATCATCAGCTGGGGTGAGATTGAAAGAAGGTTGCCATATAAACCGGAGTTTACTTACTCTTTCGACCGTCATTCGTAAGCTGAGTAAGGGAAGACATGGACACATCAATTACAGAGATTCTAAGTTGACACGCATACTGCAGCCTTGCTTAGGTGGCAATGCTAGAACAGCTATCATTTGCACTTTGAGCCCTGCACGGAGTCATGTTGAACAAACTAGAAACACACTTCTTTTTGCTTGTTGTGCAAAAGAAGTTACCACTAAAGCACAGGTTAATGTAGTGATGTCTGATAAGGCCTTGGTCAAGCAATTGCAAAAAGAGTTGGCCAGGTTGGAAGGCGAGTTAAAAACTCCTGCTACCTCCAACACTGATTATGTAGCTTTGTTGAGAAAGAAAGATCAACAGATAGAAAAGATGGATAAGGAAATTAAGGAGCTAACTAAGCAACGTGATCTTGCTGAATCAAGGATTGAGGATTTGCTGCGCATGGTGGGGAAAGATCAGATATCTAAAAAGGAAGAAGATTTATGGGAAGATGACTGTTCAGTATCAGAGTCCTCAAGCATTTGTGGTCCCAACATACGCATTAGAGAGTTCAACAATCCTCAATATAATAGTGGAGACAGTGGAAGTATTCAAGATGAAGAAGACCTTGATGAATACTGCAAAGAAGTTCGATGTGTCGAGTTGGAAGAGTCAAGTAGAGACAACTCAGAATTACTTGATCCGTCCTTAAGTGACAACGGGGATTTGGCTTTGACAGTATCTGGAGGGGAAAATGGAACAAGCCAGGAAATGTCTACACATTTGAATGAAGACAGCCATGATGAACAATCTCTACATGCCATGTCAGGAAACATGTCAAATTATAGAAATCACAAATTAACTAGAAGCCGGAGTTGTTCGGAGCATCACATGACTGCTTCCCCTGAGACAGGAGAAATGGAGAGGACGCCATTCAATGGGTTTGAAAAAGGATTCCCTGGAAGACCAGATGGTTTATGGAGAAAGTTCAATCCATTAAATTTAGATGGTTCAACAAGATTTTCAAGGAACGATTCTCAGTCTTCTATTGGAAGTCCGTCAGTGGATGACCTTAGAGGCAACAGCTTGAGATCATCTGGTGATGAGGACATTACTAGCATCCATACTTTTGTTGCTGGGATGAAAGAAATGGTCAAACTTGAATATGAAAAGCAGCTTGTTGATGGTCAGGGTCAGGAGACAGATAGAAAACTGAGGAATGTGAAAGATGTAGGTGTTGATCCAATGCAGGAGGCACCAGGAACTCCTTTAGACTGGTCTCTGCAGTTCAAGAGGCAGCAAAAAGAGATAATTGAACTGTGGCAATCTTGCTATGTACCATTAACCCACAGGACCTACTTCTTTCTTTTGTTTAGGGGTGAACAAACAGATTCCATTTACATGGAGGTAGAGCTTAGAAGACTATGCTTCCTGAAAGAAACATTTTTTGATGAAAACCAGTCTGAGAAAGACAGCCAGACAATCACGTTAACTTCAAGTGTGAGAGCTCTTCGGCGGGAGAAAGAAATGCTTATGAAGCTTATGCGGAAGAGGCTTTCTGAGGAAGAGAGGAAAAGGCTATTTAACGAATGGGGCATTGGATTGAATTCAAAGCGCAGGAGAATGCAGCTAGCAGACCGTTTATGGTGCAACACTGATATGAACCACGTAATGCAGAGTGCTGCAATAGTTGCGAGGCTAGTGAGGTTTTCAGAGCAGGGACGAGCCCTCAAGGAGATGTTTGGACTTAGCTTCACACCTCAGCTAACACGGCGAAGCTATTCATGGAAAAGTTCAAGAGCATCTCTTCCTTAG
Protein sequence

>Msa1144390

MGAIAGEELSKWEKMNGVSGCEEKILVLLRLRPLNEKEISANESADWECINDTTILYRNTLREGSTFPSAYTFDRVFRGDCETRQVYEEGAREIALSVVGGINSSIFAYGQTSSGKTYTMVGITEFAVADIFDYAKRHEERAFALKFSAIEIYNEIVRDLLSTDNTPLRLRDDPERGPVLEKLTEETLQDWGHFQELLSFCEAQRQVGETYLNEKSSRSHQIIRLTIESSAREFLGKGNSTTLSASVNFVDLAGSERASQVSSAGVRLKEGCHINRSLLTLSTVIRKLSKGRHGHINYRDSKLTRILQPCLGGNARTAIICTLSPARSHVEQTRNTLLFACCAKEVTTKAQVNVVMSDKALVKQLQKELARLEGELKTPATSNTDYVALLRKKDQQIEKMDKEIKELTKQRDLAESRIEDLLRMVGKDQISKKEEDLWEDDCSVSESSSICGPNIRIREFNNPQYNSGDSGSIQDEEDLDEYCKEVRCVELEESSRDNSELLDPSLSDNGDLALTVSGGENGTSQEMSTHLNEDSHDEQSLHAMSGNMSNYRNHKLTRSRSCSEHHMTASPETGEMERTPFNGFEKGFPGRPDGLWRKFNPLNLDGSTRFSRNDSQSSIGSPSVDDLRGNSLRSSGDEDITSIHTFVAGMKEMVKLEYEKQLVDGQGQETDRKLRNVKDVGVDPMQEAPGTPLDWSLQFKRQQKEIIELWQSCYVPLTHRTYFFLLFRGEQTDSIYMEVELRRLCFLKETFFDENQSEKDSQTITLTSSVRALRREKEMLMKLMRKRLSEEERKRLFNEWGIGLNSKRRRMQLADRLWCNTDMNHVMQSAAIVARLVRFSEQGRALKEMFGLSFTPQLTRRSYSWKSSRASLP*