Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837980 | XP_003612131.2 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 5.51e-149 | 422 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837980 | sp|Q9XI31|GLYI4_ARATH | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.49e-57 | 182 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837980 | G7KGE7 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 2.63e-149 | 422 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012440 | Msa0837980 | 0.806372 | 8.495628e-50 | -8.615850e-47 |
| Msa0017510 | Msa0837980 | 0.816215 | 6.202529e-52 | -8.615850e-47 |
| Msa0029540 | Msa0837980 | -0.806572 | 7.706466e-50 | -8.615850e-47 |
| Msa0036430 | Msa0837980 | 0.827574 | 1.451510e-54 | -8.615850e-47 |
| Msa0036960 | Msa0837980 | 0.803009 | 4.276310e-49 | -8.615850e-47 |
| Msa0044100 | Msa0837980 | 0.844200 | 8.761103e-59 | -8.615850e-47 |
| Msa0072370 | Msa0837980 | 0.807376 | 5.210593e-50 | -8.615850e-47 |
| Msa0078430 | Msa0837980 | 0.823442 | 1.382458e-53 | -8.615850e-47 |
| Msa0084500 | Msa0837980 | 0.806044 | 9.958665e-50 | -8.615850e-47 |
| Msa0095540 | Msa0837980 | 0.836362 | 9.785579e-57 | -8.615850e-47 |
| Msa0096000 | Msa0837980 | 0.812982 | 3.223802e-51 | -8.615850e-47 |
| Msa0105420 | Msa0837980 | 0.820873 | 5.448757e-53 | -8.615850e-47 |
| Msa0609430 | Msa0837980 | 0.804135 | 2.497988e-49 | -8.615850e-47 |
| Msa0611380 | Msa0837980 | 0.899736 | 1.475036e-77 | -8.615850e-47 |
| Msa0618180 | Msa0837980 | 0.884664 | 1.580048e-71 | -8.615850e-47 |
| Msa0618220 | Msa0837980 | 0.867963 | 9.287550e-66 | -8.615850e-47 |
| Msa0618290 | Msa0837980 | 0.829565 | 4.794773e-55 | -8.615850e-47 |
| Msa0619070 | Msa0837980 | 0.806120 | 9.595891e-50 | -8.615850e-47 |
| Msa0619990 | Msa0837980 | 0.860717 | 1.699529e-63 | -8.615850e-47 |
| Msa0621890 | Msa0837980 | 0.825130 | 5.544564e-54 | -8.615850e-47 |
| Msa0628640 | Msa0837980 | 0.899687 | 1.548911e-77 | -8.615850e-47 |
| Msa0631120 | Msa0837980 | 0.913634 | 4.900303e-84 | -8.615850e-47 |
| Msa0650070 | Msa0837980 | 0.814415 | 1.559148e-51 | -8.615850e-47 |
| Msa0653020 | Msa0837980 | 0.807896 | 4.040781e-50 | -8.615850e-47 |
| Msa0666030 | Msa0837980 | 0.883601 | 3.907140e-71 | -8.615850e-47 |
| Msa0669340 | Msa0837980 | 0.894019 | 3.654900e-75 | -8.615850e-47 |
| Msa0684500 | Msa0837980 | 0.851289 | 9.777352e-61 | -8.615850e-47 |
| Msa0692060 | Msa0837980 | 0.807817 | 4.199983e-50 | -8.615850e-47 |
| Msa0701970 | Msa0837980 | 0.874958 | 4.495565e-68 | -8.615850e-47 |
| Msa0706420 | Msa0837980 | 0.838480 | 2.804293e-57 | -8.615850e-47 |
| Msa0716450 | Msa0837980 | 0.908955 | 9.702560e-82 | -8.615850e-47 |
| Msa0717260 | Msa0837980 | 0.956555 | 2.240018e-114 | -8.615850e-47 |
| Msa0734230 | Msa0837980 | 0.857764 | 1.307164e-62 | -8.615850e-47 |
| Msa0741900 | Msa0837980 | 0.811889 | 5.586306e-51 | -8.615850e-47 |
| Msa0754370 | Msa0837980 | 0.805161 | 1.525587e-49 | -8.615850e-47 |
| Msa0754720 | Msa0837980 | -0.804531 | 2.065683e-49 | -8.615850e-47 |
| Msa0756630 | Msa0837980 | -0.800622 | 1.322044e-48 | -8.615850e-47 |
| Msa0758320 | Msa0837980 | 0.986712 | 1.028377e-167 | -8.615850e-47 |
| Msa0775440 | Msa0837980 | 0.885838 | 5.756873e-72 | -8.615850e-47 |
| Msa0787260 | Msa0837980 | 0.807955 | 3.925998e-50 | -8.615850e-47 |
| Msa0790850 | Msa0837980 | 0.800469 | 1.420652e-48 | -8.615850e-47 |
| Msa0799030 | Msa0837980 | 0.894746 | 1.845304e-75 | -8.615850e-47 |
| Msa0799700 | Msa0837980 | 0.885802 | 5.940236e-72 | -8.615850e-47 |
| Msa0810020 | Msa0837980 | 0.821406 | 4.107372e-53 | -8.615850e-47 |
| Msa0812820 | Msa0837980 | 0.871883 | 4.867860e-67 | -8.615850e-47 |
| Msa0822990 | Msa0837980 | 0.836879 | 7.224891e-57 | -8.615850e-47 |
| Msa0837440 | Msa0837980 | 0.894118 | 3.331042e-75 | -8.615850e-47 |
| Msa0837980 | Msa0853320 | 0.896003 | 5.594852e-76 | -8.615850e-47 |
| Msa0837980 | Msa0862100 | 0.811583 | 6.509807e-51 | -8.615850e-47 |
| Msa0837980 | Msa0870620 | 0.814271 | 1.676900e-51 | -8.615850e-47 |
| Msa0837980 | Msa0880140 | 0.822437 | 2.370633e-53 | -8.615850e-47 |
| Msa0837980 | Msa0880710 | 0.817717 | 2.853445e-52 | -8.615850e-47 |
| Msa0837980 | Msa0936270 | 0.819726 | 9.982494e-53 | -8.615850e-47 |
| Msa0837980 | Msa0944770 | 0.819547 | 1.096999e-52 | -8.615850e-47 |
| Msa0837980 | Msa0951710 | 0.801576 | 8.436382e-49 | -8.615850e-47 |
| Msa0837980 | Msa0966340 | 0.820448 | 6.824463e-53 | -8.615850e-47 |
| Msa0837980 | Msa0966420 | 0.813140 | 2.975368e-51 | -8.615850e-47 |
| Msa0837980 | Msa0966440 | 0.818598 | 1.802941e-52 | -8.615850e-47 |
| Msa0837980 | Msa0981010 | 0.823868 | 1.098646e-53 | -8.615850e-47 |
| Msa0837980 | Msa1001770 | 0.829434 | 5.157759e-55 | -8.615850e-47 |
| Msa0837980 | Msa1002620 | 0.900222 | 9.089039e-78 | -8.615850e-47 |
| Msa0837980 | Msa1007610 | -0.808810 | 2.579132e-50 | -8.615850e-47 |
| Msa0837980 | Msa1010110 | 0.811578 | 6.526735e-51 | -8.615850e-47 |
| Msa0837980 | Msa1019020 | 0.803586 | 3.247427e-49 | -8.615850e-47 |
| Msa0837980 | Msa1020720 | 0.826818 | 2.201528e-54 | -8.615850e-47 |
| Msa0837980 | Msa1033560 | 0.853503 | 2.288701e-61 | -8.615850e-47 |
| Msa0837980 | Msa1073340 | 0.813571 | 2.392954e-51 | -8.615850e-47 |
| Msa0837980 | Msa1073350 | 0.812443 | 4.229225e-51 | -8.615850e-47 |
| Msa0837980 | Msa1104000 | 0.803368 | 3.604581e-49 | -8.615850e-47 |
| Msa0837980 | Msa1113850 | 0.855333 | 6.769614e-62 | -8.615850e-47 |
| Msa0837980 | Msa1125760 | 0.808874 | 2.498632e-50 | -8.615850e-47 |
| Msa0837980 | Msa1139410 | 0.805601 | 1.233663e-49 | -8.615850e-47 |
| Msa0837980 | Msa1139810 | 0.800631 | 1.316416e-48 | -8.615850e-47 |
| Msa0837980 | Msa1160400 | 0.861212 | 1.202582e-63 | -8.615850e-47 |
| Msa0837980 | Msa1172450 | 0.817091 | 3.947488e-52 | -8.615850e-47 |
| Msa0837980 | Msa1172590 | 0.806462 | 8.131770e-50 | -8.615850e-47 |
| Msa0837980 | Msa1172670 | 0.818784 | 1.636156e-52 | -8.615850e-47 |
| Msa0837980 | Msa1179460 | 0.827965 | 1.169156e-54 | -8.615850e-47 |
| Msa0837980 | Msa1190120 | 0.867175 | 1.661380e-65 | -8.615850e-47 |
| Msa0837980 | Msa1197580 | 0.807870 | 4.091533e-50 | -8.615850e-47 |
| Msa0837980 | Msa1197590 | 0.846998 | 1.527098e-59 | -8.615850e-47 |
| Msa0837980 | Msa1201890 | 0.827679 | 1.369441e-54 | -8.615850e-47 |
| Msa0837980 | Msa1203000 | 0.889898 | 1.602624e-73 | -8.615850e-47 |
| Msa0837980 | Msa1204120 | 0.808934 | 2.426601e-50 | -8.615850e-47 |
| Msa0837980 | Msa1205960 | 0.802450 | 5.577785e-49 | -8.615850e-47 |
| Msa0837980 | Msa1211550 | 0.885049 | 1.135840e-71 | -8.615850e-47 |
| Msa0837980 | Msa1217860 | 0.818344 | 2.059039e-52 | -8.615850e-47 |
| Msa0837980 | Msa1217940 | 0.848948 | 4.425060e-60 | -8.615850e-47 |
| Msa0837980 | Msa1218480 | 0.814678 | 1.363374e-51 | -8.615850e-47 |
| Msa0837980 | Msa1219260 | 0.905805 | 2.910417e-80 | -8.615850e-47 |
| Msa0837980 | Msa1220230 | 0.802078 | 6.654701e-49 | -8.615850e-47 |
| Msa0837980 | Msa1227950 | 0.861456 | 1.012869e-63 | -8.615850e-47 |
| Msa0837980 | Msa1227970 | 0.861582 | 9.273328e-64 | -8.615850e-47 |
| Msa0837980 | Msa1254700 | 0.849954 | 2.321038e-60 | -8.615850e-47 |
| Msa0837980 | Msa1255280 | 0.883108 | 5.930104e-71 | -8.615850e-47 |
| Msa0837980 | Msa1258050 | 0.870729 | 1.171322e-66 | -8.615850e-47 |
| Msa0837980 | Msa1265960 | 0.808790 | 2.604789e-50 | -8.615850e-47 |
| Msa0837980 | Msa1266960 | 0.900075 | 1.052576e-77 | -8.615850e-47 |
| Msa0837980 | Msa1281720 | 0.807621 | 4.622863e-50 | -8.615850e-47 |
| Msa0837980 | Msa1291870 | 0.843906 | 1.050145e-58 | -8.615850e-47 |
| Msa0837980 | Msa1308130 | 0.831130 | 1.987136e-55 | -8.615850e-47 |
| Msa0837980 | Msa1321000 | 0.823458 | 1.370099e-53 | -8.615850e-47 |
| Msa0837980 | Msa1329920 | 0.825328 | 4.976629e-54 | -8.615850e-47 |
| Msa0837980 | Msa1339940 | 0.880127 | 7.087169e-70 | -8.615850e-47 |
| Msa0837980 | Msa1342430 | 0.811917 | 5.507276e-51 | -8.615850e-47 |
| Msa0837980 | Msa1343820 | 0.803498 | 3.387629e-49 | -8.615850e-47 |
| Msa0837980 | Msa1369700 | 0.874923 | 4.618628e-68 | -8.615850e-47 |
| Msa0837980 | Msa1381140 | 0.820728 | 5.883191e-53 | -8.615850e-47 |
| Msa0837980 | Msa1395870 | 0.884098 | 2.561425e-71 | -8.615850e-47 |
| Msa0837980 | Msa1397250 | 0.854285 | 1.362778e-61 | -8.615850e-47 |
| Msa0837980 | Msa1397340 | 0.802493 | 5.466157e-49 | -8.615850e-47 |
| Msa0837980 | Msa1399560 | 0.899077 | 2.830316e-77 | -8.615850e-47 |
| Msa0837980 | Msa1401150 | 0.842615 | 2.320682e-58 | -8.615850e-47 |
| Msa0837980 | Msa1405180 | 0.815843 | 7.509025e-52 | -8.615850e-47 |
| Msa0837980 | Msa1423450 | 0.820035 | 8.485991e-53 | -8.615850e-47 |
| Msa0837980 | Msa1429250 | 0.800242 | 1.579675e-48 | -8.615850e-47 |
| Msa0837980 | Msa1429420 | 0.801858 | 7.382518e-49 | -8.615850e-47 |
| Msa0837980 | Msa1431000 | 0.811853 | 5.688690e-51 | -8.615850e-47 |
| Msa0837980 | Msa1437190 | 0.854454 | 1.218221e-61 | -8.615850e-47 |
| Msa0837980 | Msa1439960 | 0.811592 | 6.482195e-51 | -8.615850e-47 |
| Msa0837980 | Msa1440340 | 0.821293 | 4.361234e-53 | -8.615850e-47 |
| Msa0837980 | Msa1443840 | 0.884831 | 1.369744e-71 | -8.615850e-47 |
| Msa0837980 | Msa1449730 | 0.827489 | 1.521338e-54 | -8.615850e-47 |
| Msa0837980 | Msa1452060 | 0.881081 | 3.228706e-70 | -8.615850e-47 |
| Msa0837980 | Msa1460380 | 0.873195 | 1.775167e-67 | -8.615850e-47 |
| Msa0837980 | Msa1460890 | 0.819372 | 1.202268e-52 | -8.615850e-47 |
| Msa0120730 | Msa0837980 | 0.804929 | 1.705993e-49 | -8.615850e-47 |
| Msa0130570 | Msa0837980 | 0.805182 | 1.510437e-49 | -8.615850e-47 |
| Msa0141100 | Msa0837980 | 0.899439 | 1.980309e-77 | -8.615850e-47 |
| Msa0148340 | Msa0837980 | 0.802848 | 4.616994e-49 | -8.615850e-47 |
| Msa0149560 | Msa0837980 | 0.802579 | 5.247038e-49 | -8.615850e-47 |
| Msa0153420 | Msa0837980 | 0.818455 | 1.943005e-52 | -8.615850e-47 |
| Msa0156650 | Msa0837980 | -0.802413 | 5.675753e-49 | -8.615850e-47 |
| Msa0157290 | Msa0837980 | 0.815712 | 8.032976e-52 | -8.615850e-47 |
| Msa0163980 | Msa0837980 | 0.806219 | 9.146398e-50 | -8.615850e-47 |
| Msa0172350 | Msa0837980 | 0.804948 | 1.690249e-49 | -8.615850e-47 |
| Msa0173990 | Msa0837980 | 0.804928 | 1.707247e-49 | -8.615850e-47 |
| Msa0183750 | Msa0837980 | 0.859294 | 4.569443e-63 | -8.615850e-47 |
| Msa0185380 | Msa0837980 | 0.829347 | 5.416295e-55 | -8.615850e-47 |
| Msa0185480 | Msa0837980 | 0.806439 | 8.220816e-50 | -8.615850e-47 |
| Msa0191040 | Msa0837980 | 0.859050 | 5.406029e-63 | -8.615850e-47 |
| Msa0206800 | Msa0837980 | 0.808736 | 2.674350e-50 | -8.615850e-47 |
| Msa0208520 | Msa0837980 | 0.801721 | 7.878373e-49 | -8.615850e-47 |
| Msa0220300 | Msa0837980 | 0.860002 | 2.797730e-63 | -8.615850e-47 |
| Msa0225600 | Msa0837980 | 0.842477 | 2.524470e-58 | -8.615850e-47 |
| Msa0233340 | Msa0837980 | 0.859070 | 5.334514e-63 | -8.615850e-47 |
| Msa0236440 | Msa0837980 | 0.812008 | 5.262023e-51 | -8.615850e-47 |
| Msa0371540 | Msa0837980 | 0.803795 | 2.939917e-49 | -8.615850e-47 |
| Msa0374850 | Msa0837980 | 0.898386 | 5.583269e-77 | -8.615850e-47 |
| Msa0375090 | Msa0837980 | 0.897710 | 1.080207e-76 | -8.615850e-47 |
| Msa0385670 | Msa0837980 | 0.844890 | 5.711980e-59 | -8.615850e-47 |
| Msa0419820 | Msa0837980 | 0.822468 | 2.330476e-53 | -8.615850e-47 |
| Msa0423360 | Msa0837980 | -0.826841 | 2.174271e-54 | -8.615850e-47 |
| Msa0435670 | Msa0837980 | 0.852364 | 4.845221e-61 | -8.615850e-47 |
| Msa0466060 | Msa0837980 | 0.802362 | 5.814927e-49 | -8.615850e-47 |
| Msa0470340 | Msa0837980 | 0.905531 | 3.888987e-80 | -8.615850e-47 |
| Msa0470860 | Msa0837980 | 0.884511 | 1.802256e-71 | -8.615850e-47 |
| Msa0479680 | Msa0837980 | 0.834879 | 2.322106e-56 | -8.615850e-47 |
| Msa0479700 | Msa0837980 | 0.827983 | 1.157427e-54 | -8.615850e-47 |
| Msa0480950 | Msa0837980 | 0.882712 | 8.278430e-71 | -8.615850e-47 |
| Msa0481110 | Msa0837980 | 0.822326 | 2.515347e-53 | -8.615850e-47 |
| Msa0251240 | Msa0837980 | 0.849743 | 2.658127e-60 | -8.615850e-47 |
| Msa0266450 | Msa0837980 | 0.840628 | 7.754611e-58 | -8.615850e-47 |
| Msa0267760 | Msa0837980 | 0.800646 | 1.307373e-48 | -8.615850e-47 |
| Msa0271040 | Msa0837980 | 0.801419 | 9.086846e-49 | -8.615850e-47 |
| Msa0282210 | Msa0837980 | 0.805671 | 1.193026e-49 | -8.615850e-47 |
| Msa0288190 | Msa0837980 | 0.810860 | 9.342029e-51 | -8.615850e-47 |
| Msa0288200 | Msa0837980 | 0.800645 | 1.308038e-48 | -8.615850e-47 |
| Msa0301200 | Msa0837980 | 0.802480 | 5.498593e-49 | -8.615850e-47 |
| Msa0309350 | Msa0837980 | 0.807793 | 4.250200e-50 | -8.615850e-47 |
| Msa0311690 | Msa0837980 | 0.852263 | 5.177537e-61 | -8.615850e-47 |
| Msa0315250 | Msa0837980 | 0.850139 | 2.060054e-60 | -8.615850e-47 |
| Msa0326540 | Msa0837980 | 0.823828 | 1.122496e-53 | -8.615850e-47 |
| Msa0334500 | Msa0837980 | 0.800762 | 1.237623e-48 | -8.615850e-47 |
| Msa0484780 | Msa0837980 | 0.804068 | 2.579012e-49 | -8.615850e-47 |
| Msa0517340 | Msa0837980 | 0.804857 | 1.765839e-49 | -8.615850e-47 |
| Msa0520510 | Msa0837980 | 0.805079 | 1.586989e-49 | -8.615850e-47 |
| Msa0531430 | Msa0837980 | 0.906366 | 1.602170e-80 | -8.615850e-47 |
| Msa0534570 | Msa0837980 | 0.847372 | 1.206047e-59 | -8.615850e-47 |
| Msa0534590 | Msa0837980 | 0.900156 | 9.708894e-78 | -8.615850e-47 |
| Msa0548620 | Msa0837980 | 0.815411 | 9.372862e-52 | -8.615850e-47 |
| Msa0548660 | Msa0837980 | 0.804713 | 1.892434e-49 | -8.615850e-47 |
| Msa0557680 | Msa0837980 | 0.816071 | 6.678842e-52 | -8.615850e-47 |
| Msa0565600 | Msa0837980 | 0.881094 | 3.192874e-70 | -8.615850e-47 |
| Msa0568820 | Msa0837980 | 0.811516 | 6.731693e-51 | -8.615850e-47 |
| Msa0574460 | Msa0837980 | 0.802709 | 4.933586e-49 | -8.615850e-47 |
| Msa0590800 | Msa0837980 | 0.902940 | 5.794089e-79 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837980 | MtrunA17_Chr5g0405171 | 97.101 | 207 | 6 | 0 | 1 | 207 | 1 | 207 | 5.07e-153 | 422 |
| Msa0837980 | MtrunA17_Chr8g0372141 | 76.410 | 195 | 43 | 3 | 14 | 207 | 1 | 193 | 2.38e-108 | 308 |
| Msa0837980 | MtrunA17_Chr2g0277151 | 53.846 | 182 | 80 | 1 | 25 | 206 | 3 | 180 | 1.81e-66 | 202 |
| Msa0837980 | MtrunA17_Chr4g0063501 | 58.571 | 140 | 54 | 1 | 25 | 164 | 5 | 140 | 1.09e-56 | 177 |
| Msa0837980 | MtrunA17_Chr4g0003581 | 55.479 | 146 | 57 | 2 | 25 | 168 | 9 | 148 | 2.08e-55 | 174 |
| Msa0837980 | MtrunA17_Chr2g0332851 | 54.225 | 142 | 60 | 2 | 25 | 165 | 9 | 146 | 3.24e-51 | 163 |
| Msa0837980 | MtrunA17_Chr2g0332841 | 52.817 | 142 | 62 | 2 | 25 | 165 | 9 | 146 | 3.76e-49 | 157 |
| Msa0837980 | MtrunA17_Chr4g0020201 | 47.333 | 150 | 77 | 2 | 17 | 165 | 26 | 174 | 8.11e-48 | 155 |
| Msa0837980 | MtrunA17_Chr1g0212241 | 46.617 | 133 | 66 | 2 | 42 | 173 | 3 | 131 | 1.79e-39 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0837980 | AT1G15380.2 | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.52e-58 | 182 |
| Msa0837980 | AT1G15380.1 | 58.993 | 139 | 53 | 1 | 25 | 163 | 9 | 143 | 1.52e-58 | 182 |
| Msa0837980 | AT1G80160.1 | 57.639 | 144 | 57 | 2 | 25 | 168 | 9 | 148 | 2.88e-58 | 181 |
| Msa0837980 | AT1G80160.3 | 57.447 | 141 | 56 | 2 | 25 | 165 | 50 | 186 | 1.14e-57 | 181 |
| Msa0837980 | AT2G28420.1 | 52.083 | 144 | 65 | 2 | 26 | 168 | 17 | 157 | 1.39e-52 | 167 |
| Msa0837980 | AT1G80160.2 | 53.000 | 100 | 43 | 2 | 69 | 168 | 27 | 122 | 5.27e-33 | 116 |
Find 44 sgRNAs with CRISPR-Local
Find 152 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATCTTCTTTCAAATTTAC+TGG | 0.206523 | 5_4:-12106117 | Msa0837980:CDS |
| CATATGGTGTTTAAAATATA+TGG | 0.250719 | 5_4:-12105043 | Msa0837980:three_prime_UTR |
| TGGTTATCCTTGGGATTAAT+AGG | 0.256572 | 5_4:+12105895 | None:intergenic |
| CTCTTAAAGCTATGGCTTCT+AGG | 0.268260 | 5_4:+12105348 | None:intergenic |
| AAGATATGTTGGAGGATATT+AGG | 0.278431 | 5_4:-12105143 | Msa0837980:three_prime_UTR |
| GGTAGAAGATGAAGGAATTA+AGG | 0.296959 | 5_4:-12105475 | Msa0837980:CDS |
| GAGAGAACAAAAGTGGAAAA+TGG | 0.331776 | 5_4:-12106271 | Msa0837980:CDS |
| AAATTTACAATCAATACTTT+TGG | 0.332571 | 5_4:-12104936 | Msa0837980:three_prime_UTR |
| TAAGAAGAGATTAGAAGAAA+AGG | 0.341886 | 5_4:-12105520 | Msa0837980:CDS |
| GAAGCAGTGCATGAAGAAAT+AGG | 0.352827 | 5_4:+12105378 | None:intergenic |
| GAATCCTCCACACTTGGAAT+TGG | 0.363613 | 5_4:+12105317 | None:intergenic |
| CATGAAGAAATAGGAATGAT+TGG | 0.374847 | 5_4:+12105387 | None:intergenic |
| AAGAAGAGATTAGAAGAAAA+GGG | 0.385631 | 5_4:-12105519 | Msa0837980:CDS |
| GAAAGAAGATGGTCGTTTGA+TGG | 0.396618 | 5_4:+12106128 | None:intergenic |
| TGAATTGTATTTGTAACATA+TGG | 0.409819 | 5_4:-12105059 | Msa0837980:three_prime_UTR |
| AGCTCAATCATGTAGCCATC+AGG | 0.416541 | 5_4:+12105429 | None:intergenic |
| GAATGAGATATGGTTATCCT+TGG | 0.430947 | 5_4:+12105885 | None:intergenic |
| GGATAACCATATCTCATTCC+AGG | 0.432811 | 5_4:-12105881 | Msa0837980:intron |
| ATTCATTGAGAGAACAAAAG+TGG | 0.461029 | 5_4:-12106278 | Msa0837980:CDS |
| GTATCAAATTCATCAATGTC+TGG | 0.469039 | 5_4:+12105937 | None:intergenic |
| GAATGTAAAATTGTTAGTCT+TGG | 0.473770 | 5_4:-12105121 | Msa0837980:three_prime_UTR |
| AAAGAAGATGGTCGTTTGAT+GGG | 0.476824 | 5_4:+12106129 | None:intergenic |
| CCAGTAAATTTGAAAGAAGA+TGG | 0.495096 | 5_4:+12106117 | None:intergenic |
| ATGAAGAAATAGGAATGATT+GGG | 0.499317 | 5_4:+12105388 | None:intergenic |
| CTGCATGAATCCTCCACACT+TGG | 0.500461 | 5_4:+12105311 | None:intergenic |
| AATGAGATATGGTTATCCTT+GGG | 0.506176 | 5_4:+12105886 | None:intergenic |
| CTTTCAAATTTACTGGAGCA+TGG | 0.508696 | 5_4:-12106110 | Msa0837980:intron |
| AAGTAGATCTCTTAAAGCTA+TGG | 0.522280 | 5_4:+12105340 | None:intergenic |
| ATTCATGCAGAATGTTATGA+TGG | 0.532345 | 5_4:-12105298 | Msa0837980:CDS |
| AGAGCAGAGTGGTGGGTCCA+AGG | 0.539966 | 5_4:-12105088 | Msa0837980:three_prime_UTR |
| TCATGTAGCCATCAGGGTCA+TGG | 0.545015 | 5_4:+12105436 | None:intergenic |
| AATGAGATATGTTACAGCAT+TGG | 0.548154 | 5_4:-12105496 | Msa0837980:CDS |
| TAATTGTGAGAGCAGAGTGG+TGG | 0.567120 | 5_4:-12105096 | Msa0837980:three_prime_UTR |
| ACAGCATTGGTAGAAGATGA+AGG | 0.580373 | 5_4:-12105483 | Msa0837980:CDS |
| GTGTTCTTCCATGACCCTGA+TGG | 0.589307 | 5_4:-12105444 | Msa0837980:CDS |
| ACATGATTCAATGAGAGCAA+TGG | 0.593307 | 5_4:+12106216 | None:intergenic |
| AACGAGGCCTATTAATCCCA+AGG | 0.600112 | 5_4:-12105902 | Msa0837980:CDS |
| GCTCAATCATGTAGCCATCA+GGG | 0.602960 | 5_4:+12105430 | None:intergenic |
| TCTACTTCCAATTCCAAGTG+TGG | 0.614729 | 5_4:-12105324 | Msa0837980:CDS |
| AATTGTGAGAGCAGAGTGGT+GGG | 0.617021 | 5_4:-12105095 | Msa0837980:three_prime_UTR |
| ACTTCCAATTCCAAGTGTGG+AGG | 0.621587 | 5_4:-12105321 | Msa0837980:CDS |
| TATGATGGAAAGCTTGAGCA+TGG | 0.636263 | 5_4:-12105283 | Msa0837980:CDS |
| GTTTAATTGTGAGAGCAGAG+TGG | 0.701131 | 5_4:-12105099 | Msa0837980:three_prime_UTR |
| ATACTTACATGAATGAAACG+AGG | 0.744566 | 5_4:-12105918 | Msa0837980:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AGCTTATTTTTTTATATTTT+TGG | - | chr5_4:12105124-12105143 | Msa0837980:three_prime_UTR | 10.0% |
| !! | TATCTTATATAACAAAAAAA+AGG | + | chr5_4:12106008-12106027 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAGATATGT+TGG | - | chr5_4:12106055-12106074 | Msa0837980:intron | 10.0% |
| !!! | AGCTTATTTTTTTATATTTT+TGG | - | chr5_4:12105124-12105143 | Msa0837980:three_prime_UTR | 10.0% |
| !! | TATCTTATATAACAAAAAAA+AGG | + | chr5_4:12106008-12106027 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAAGATATGT+TGG | - | chr5_4:12106055-12106074 | Msa0837980:intron | 10.0% |
| !!! | TATAAATCTTTATTTTTACC+TGG | + | chr5_4:12105349-12105368 | None:intergenic | 15.0% |
| !!! | AATATAGTCATTTTTTGAAA+TGG | - | chr5_4:12105378-12105397 | Msa0837980:CDS | 15.0% |
| !!! | CCATATTGTATATAAATTTT+TGG | + | chr5_4:12105639-12105658 | None:intergenic | 15.0% |
| !! | CCAAAAATTTATATACAATA+TGG | - | chr5_4:12105636-12105655 | Msa0837980:intron | 15.0% |
| !!! | TATTGATTGTAAATTTTACA+TGG | + | chr5_4:12106269-12106288 | None:intergenic | 15.0% |
| !!! | AAATTTACAATCAATACTTT+TGG | - | chr5_4:12106273-12106292 | Msa0837980:CDS | 15.0% |
| !!! | TATAAATCTTTATTTTTACC+TGG | + | chr5_4:12105349-12105368 | None:intergenic | 15.0% |
| !!! | AATATAGTCATTTTTTGAAA+TGG | - | chr5_4:12105378-12105397 | Msa0837980:CDS | 15.0% |
| !!! | CCATATTGTATATAAATTTT+TGG | + | chr5_4:12105639-12105658 | None:intergenic | 15.0% |
| !! | CCAAAAATTTATATACAATA+TGG | - | chr5_4:12105636-12105655 | Msa0837980:intron | 15.0% |
| !!! | TATTGATTGTAAATTTTACA+TGG | + | chr5_4:12106269-12106288 | None:intergenic | 15.0% |
| !!! | AAATTTACAATCAATACTTT+TGG | - | chr5_4:12106273-12106292 | Msa0837980:CDS | 15.0% |
| !!! | TTTTGCAGGTTTTATAATTA+TGG | - | chr5_4:12105224-12105243 | Msa0837980:three_prime_UTR | 20.0% |
| !!! | AGGTTTTATAATTATGGTAT+TGG | - | chr5_4:12105230-12105249 | Msa0837980:three_prime_UTR | 20.0% |
| !! | GCACATAATAATTATAACAA+AGG | + | chr5_4:12105540-12105559 | None:intergenic | 20.0% |
| !! | TGTTATAATTATTATGTGCA+TGG | - | chr5_4:12105541-12105560 | Msa0837980:CDS | 20.0% |
| !! | AAAAAAAAAAGATATGTTGG+AGG | - | chr5_4:12106058-12106077 | Msa0837980:intron | 20.0% |
| !! | TGAATTGTATTTGTAACATA+TGG | - | chr5_4:12106150-12106169 | Msa0837980:CDS | 20.0% |
| !!! | CATATGGTGTTTAAAATATA+TGG | - | chr5_4:12106166-12106185 | Msa0837980:CDS | 20.0% |
| !!! | TATATGGTTAAACATGTTTT+TGG | - | chr5_4:12106182-12106201 | Msa0837980:CDS | 20.0% |
| !!! | TTTTGCAGGTTTTATAATTA+TGG | - | chr5_4:12105224-12105243 | Msa0837980:three_prime_UTR | 20.0% |
| !!! | AGGTTTTATAATTATGGTAT+TGG | - | chr5_4:12105230-12105249 | Msa0837980:three_prime_UTR | 20.0% |
| !! | GCACATAATAATTATAACAA+AGG | + | chr5_4:12105540-12105559 | None:intergenic | 20.0% |
| !! | TGTTATAATTATTATGTGCA+TGG | - | chr5_4:12105541-12105560 | Msa0837980:CDS | 20.0% |
| !! | AAAAAAAAAAGATATGTTGG+AGG | - | chr5_4:12106058-12106077 | Msa0837980:intron | 20.0% |
| !! | TGAATTGTATTTGTAACATA+TGG | - | chr5_4:12106150-12106169 | Msa0837980:CDS | 20.0% |
| !!! | CATATGGTGTTTAAAATATA+TGG | - | chr5_4:12106166-12106185 | Msa0837980:CDS | 20.0% |
| !!! | TATATGGTTAAACATGTTTT+TGG | - | chr5_4:12106182-12106201 | Msa0837980:CDS | 20.0% |
| !! | CAATTTTATGAGGATGTTTT+GGG | - | chr5_4:12105050-12105069 | Msa0837980:three_prime_UTR | 25.0% |
| !!! | GCTTTTAACTTTTTTTTTGC+AGG | - | chr5_4:12105210-12105229 | Msa0837980:three_prime_UTR | 25.0% |
| !!! | GTCATTTTTTGAAATGGTTA+TGG | - | chr5_4:12105384-12105403 | Msa0837980:CDS | 25.0% |
| ! | AAAGGTCATAATACAAAAAG+TGG | + | chr5_4:12105522-12105541 | None:intergenic | 25.0% |
| ! | TAAGTAAATAATTAACCGCA+TGG | - | chr5_4:12105573-12105592 | Msa0837980:intron | 25.0% |
| ! | TAAGAAGAGATTAGAAGAAA+AGG | - | chr5_4:12105689-12105708 | Msa0837980:intron | 25.0% |
| ! | AAGAAGAGATTAGAAGAAAA+GGG | - | chr5_4:12105690-12105709 | Msa0837980:intron | 25.0% |
| ! | ATGAAGAAATAGGAATGATT+GGG | + | chr5_4:12105824-12105843 | None:intergenic | 25.0% |
| !! | GAATGTAAAATTGTTAGTCT+TGG | - | chr5_4:12106088-12106107 | Msa0837980:intron | 25.0% |
| !! | AATACAATTCAACTTTTCCT+TGG | + | chr5_4:12106141-12106160 | None:intergenic | 25.0% |
| !! | CAATTTTATGAGGATGTTTT+GGG | - | chr5_4:12105050-12105069 | Msa0837980:three_prime_UTR | 25.0% |
| !!! | GCTTTTAACTTTTTTTTTGC+AGG | - | chr5_4:12105210-12105229 | Msa0837980:three_prime_UTR | 25.0% |
| !!! | GTCATTTTTTGAAATGGTTA+TGG | - | chr5_4:12105384-12105403 | Msa0837980:CDS | 25.0% |
| ! | AAAGGTCATAATACAAAAAG+TGG | + | chr5_4:12105522-12105541 | None:intergenic | 25.0% |
| ! | TAAGTAAATAATTAACCGCA+TGG | - | chr5_4:12105573-12105592 | Msa0837980:intron | 25.0% |
| ! | TAAGAAGAGATTAGAAGAAA+AGG | - | chr5_4:12105689-12105708 | Msa0837980:intron | 25.0% |
| ! | AAGAAGAGATTAGAAGAAAA+GGG | - | chr5_4:12105690-12105709 | Msa0837980:intron | 25.0% |
| ! | ATGAAGAAATAGGAATGATT+GGG | + | chr5_4:12105824-12105843 | None:intergenic | 25.0% |
| !! | GAATGTAAAATTGTTAGTCT+TGG | - | chr5_4:12106088-12106107 | Msa0837980:intron | 25.0% |
| !! | AATACAATTCAACTTTTCCT+TGG | + | chr5_4:12106141-12106160 | None:intergenic | 25.0% |
| ATTCATTGAGAGAACAAAAG+TGG | - | chr5_4:12104931-12104950 | Msa0837980:three_prime_UTR | 30.0% | |
| ! | GGAATCTATGCAATTTTATG+AGG | - | chr5_4:12105040-12105059 | Msa0837980:three_prime_UTR | 30.0% |
| ! | GCAATTTTATGAGGATGTTT+TGG | - | chr5_4:12105049-12105068 | Msa0837980:three_prime_UTR | 30.0% |
| CCAGTAAATTTGAAAGAAGA+TGG | + | chr5_4:12105095-12105114 | None:intergenic | 30.0% | |
| CCATCTTCTTTCAAATTTAC+TGG | - | chr5_4:12105092-12105111 | Msa0837980:three_prime_UTR | 30.0% | |
| GTATCAAATTCATCAATGTC+TGG | + | chr5_4:12105275-12105294 | None:intergenic | 30.0% | |
| ATACTTACATGAATGAAACG+AGG | - | chr5_4:12105291-12105310 | Msa0837980:CDS | 30.0% | |
| AATGAGATATGGTTATCCTT+GGG | + | chr5_4:12105326-12105345 | None:intergenic | 30.0% | |
| ! | TTTTTACCTGGAATGAGATA+TGG | + | chr5_4:12105337-12105356 | None:intergenic | 30.0% |
| ATGGAAATCTATGCATATGT+AGG | - | chr5_4:12105438-12105457 | Msa0837980:CDS | 30.0% | |
| TGGAAATCTATGCATATGTA+GGG | - | chr5_4:12105439-12105458 | Msa0837980:CDS | 30.0% | |
| !!! | ATATGGTTTTTTGCAGTGTA+CGG | - | chr5_4:12105653-12105672 | Msa0837980:intron | 30.0% |
| AATGAGATATGTTACAGCAT+TGG | - | chr5_4:12105713-12105732 | Msa0837980:intron | 30.0% | |
| CATGAAGAAATAGGAATGAT+TGG | + | chr5_4:12105825-12105844 | None:intergenic | 30.0% | |
| AAGTAGATCTCTTAAAGCTA+TGG | + | chr5_4:12105872-12105891 | None:intergenic | 30.0% | |
| ATTCATGCAGAATGTTATGA+TGG | - | chr5_4:12105911-12105930 | Msa0837980:CDS | 30.0% | |
| AAGATATGTTGGAGGATATT+AGG | - | chr5_4:12106066-12106085 | Msa0837980:intron | 30.0% | |
| ATTCATTGAGAGAACAAAAG+TGG | - | chr5_4:12104931-12104950 | Msa0837980:three_prime_UTR | 30.0% | |
| ! | GGAATCTATGCAATTTTATG+AGG | - | chr5_4:12105040-12105059 | Msa0837980:three_prime_UTR | 30.0% |
| ! | GCAATTTTATGAGGATGTTT+TGG | - | chr5_4:12105049-12105068 | Msa0837980:three_prime_UTR | 30.0% |
| CCAGTAAATTTGAAAGAAGA+TGG | + | chr5_4:12105095-12105114 | None:intergenic | 30.0% | |
| CCATCTTCTTTCAAATTTAC+TGG | - | chr5_4:12105092-12105111 | Msa0837980:three_prime_UTR | 30.0% | |
| GTATCAAATTCATCAATGTC+TGG | + | chr5_4:12105275-12105294 | None:intergenic | 30.0% | |
| ATACTTACATGAATGAAACG+AGG | - | chr5_4:12105291-12105310 | Msa0837980:CDS | 30.0% | |
| AATGAGATATGGTTATCCTT+GGG | + | chr5_4:12105326-12105345 | None:intergenic | 30.0% | |
| ! | TTTTTACCTGGAATGAGATA+TGG | + | chr5_4:12105337-12105356 | None:intergenic | 30.0% |
| ATGGAAATCTATGCATATGT+AGG | - | chr5_4:12105438-12105457 | Msa0837980:CDS | 30.0% | |
| TGGAAATCTATGCATATGTA+GGG | - | chr5_4:12105439-12105458 | Msa0837980:CDS | 30.0% | |
| !!! | ATATGGTTTTTTGCAGTGTA+CGG | - | chr5_4:12105653-12105672 | Msa0837980:intron | 30.0% |
| AATGAGATATGTTACAGCAT+TGG | - | chr5_4:12105713-12105732 | Msa0837980:intron | 30.0% | |
| CATGAAGAAATAGGAATGAT+TGG | + | chr5_4:12105825-12105844 | None:intergenic | 30.0% | |
| AAGTAGATCTCTTAAAGCTA+TGG | + | chr5_4:12105872-12105891 | None:intergenic | 30.0% | |
| ATTCATGCAGAATGTTATGA+TGG | - | chr5_4:12105911-12105930 | Msa0837980:CDS | 30.0% | |
| AAGATATGTTGGAGGATATT+AGG | - | chr5_4:12106066-12106085 | Msa0837980:intron | 30.0% | |
| GAGAGAACAAAAGTGGAAAA+TGG | - | chr5_4:12104938-12104957 | Msa0837980:three_prime_UTR | 35.0% | |
| ACATGATTCAATGAGAGCAA+TGG | + | chr5_4:12104996-12105015 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTAGATCAGTGT+TGG | - | chr5_4:12105019-12105038 | Msa0837980:three_prime_UTR | 35.0% |
| AAAGAAGATGGTCGTTTGAT+GGG | + | chr5_4:12105083-12105102 | None:intergenic | 35.0% | |
| CTTTCAAATTTACTGGAGCA+TGG | - | chr5_4:12105099-12105118 | Msa0837980:three_prime_UTR | 35.0% | |
| TGGTTATCCTTGGGATTAAT+AGG | + | chr5_4:12105317-12105336 | None:intergenic | 35.0% | |
| GAATGAGATATGGTTATCCT+TGG | + | chr5_4:12105327-12105346 | None:intergenic | 35.0% | |
| AGCTAAATTTGTGATCCATG+CGG | + | chr5_4:12105591-12105610 | None:intergenic | 35.0% | |
| GGTAGAAGATGAAGGAATTA+AGG | - | chr5_4:12105734-12105753 | Msa0837980:intron | 35.0% | |
| GAGAGAACAAAAGTGGAAAA+TGG | - | chr5_4:12104938-12104957 | Msa0837980:three_prime_UTR | 35.0% | |
| ACATGATTCAATGAGAGCAA+TGG | + | chr5_4:12104996-12105015 | None:intergenic | 35.0% | |
| ! | TCTTTTGTGTAGATCAGTGT+TGG | - | chr5_4:12105019-12105038 | Msa0837980:three_prime_UTR | 35.0% |
| AAAGAAGATGGTCGTTTGAT+GGG | + | chr5_4:12105083-12105102 | None:intergenic | 35.0% | |
| CTTTCAAATTTACTGGAGCA+TGG | - | chr5_4:12105099-12105118 | Msa0837980:three_prime_UTR | 35.0% | |
| TGGTTATCCTTGGGATTAAT+AGG | + | chr5_4:12105317-12105336 | None:intergenic | 35.0% | |
| GAATGAGATATGGTTATCCT+TGG | + | chr5_4:12105327-12105346 | None:intergenic | 35.0% | |
| AGCTAAATTTGTGATCCATG+CGG | + | chr5_4:12105591-12105610 | None:intergenic | 35.0% | |
| GGTAGAAGATGAAGGAATTA+AGG | - | chr5_4:12105734-12105753 | Msa0837980:intron | 35.0% | |
| GAAAGAAGATGGTCGTTTGA+TGG | + | chr5_4:12105084-12105103 | None:intergenic | 40.0% | |
| GGATAACCATATCTCATTCC+AGG | - | chr5_4:12105328-12105347 | Msa0837980:CDS | 40.0% | |
| !! | ACAGCATTGGTAGAAGATGA+AGG | - | chr5_4:12105726-12105745 | Msa0837980:intron | 40.0% |
| GAAGCAGTGCATGAAGAAAT+AGG | + | chr5_4:12105834-12105853 | None:intergenic | 40.0% | |
| CTCTTAAAGCTATGGCTTCT+AGG | + | chr5_4:12105864-12105883 | None:intergenic | 40.0% | |
| TCTACTTCCAATTCCAAGTG+TGG | - | chr5_4:12105885-12105904 | Msa0837980:CDS | 40.0% | |
| ! | TATGATGGAAAGCTTGAGCA+TGG | - | chr5_4:12105926-12105945 | Msa0837980:CDS | 40.0% |
| GTTTAATTGTGAGAGCAGAG+TGG | - | chr5_4:12106110-12106129 | Msa0837980:intron | 40.0% | |
| GAAAGAAGATGGTCGTTTGA+TGG | + | chr5_4:12105084-12105103 | None:intergenic | 40.0% | |
| GGATAACCATATCTCATTCC+AGG | - | chr5_4:12105328-12105347 | Msa0837980:CDS | 40.0% | |
| !! | ACAGCATTGGTAGAAGATGA+AGG | - | chr5_4:12105726-12105745 | Msa0837980:intron | 40.0% |
| GAAGCAGTGCATGAAGAAAT+AGG | + | chr5_4:12105834-12105853 | None:intergenic | 40.0% | |
| CTCTTAAAGCTATGGCTTCT+AGG | + | chr5_4:12105864-12105883 | None:intergenic | 40.0% | |
| TCTACTTCCAATTCCAAGTG+TGG | - | chr5_4:12105885-12105904 | Msa0837980:CDS | 40.0% | |
| ! | TATGATGGAAAGCTTGAGCA+TGG | - | chr5_4:12105926-12105945 | Msa0837980:CDS | 40.0% |
| GTTTAATTGTGAGAGCAGAG+TGG | - | chr5_4:12106110-12106129 | Msa0837980:intron | 40.0% | |
| AACGAGGCCTATTAATCCCA+AGG | - | chr5_4:12105307-12105326 | Msa0837980:CDS | 45.0% | |
| GCTCAATCATGTAGCCATCA+GGG | + | chr5_4:12105782-12105801 | None:intergenic | 45.0% | |
| AGCTCAATCATGTAGCCATC+AGG | + | chr5_4:12105783-12105802 | None:intergenic | 45.0% | |
| ACTTCCAATTCCAAGTGTGG+AGG | - | chr5_4:12105888-12105907 | Msa0837980:CDS | 45.0% | |
| GAATCCTCCACACTTGGAAT+TGG | + | chr5_4:12105895-12105914 | None:intergenic | 45.0% | |
| TAATTGTGAGAGCAGAGTGG+TGG | - | chr5_4:12106113-12106132 | Msa0837980:CDS | 45.0% | |
| AATTGTGAGAGCAGAGTGGT+GGG | - | chr5_4:12106114-12106133 | Msa0837980:CDS | 45.0% | |
| AACGAGGCCTATTAATCCCA+AGG | - | chr5_4:12105307-12105326 | Msa0837980:CDS | 45.0% | |
| GCTCAATCATGTAGCCATCA+GGG | + | chr5_4:12105782-12105801 | None:intergenic | 45.0% | |
| AGCTCAATCATGTAGCCATC+AGG | + | chr5_4:12105783-12105802 | None:intergenic | 45.0% | |
| ACTTCCAATTCCAAGTGTGG+AGG | - | chr5_4:12105888-12105907 | Msa0837980:CDS | 45.0% | |
| GAATCCTCCACACTTGGAAT+TGG | + | chr5_4:12105895-12105914 | None:intergenic | 45.0% | |
| TAATTGTGAGAGCAGAGTGG+TGG | - | chr5_4:12106113-12106132 | Msa0837980:CDS | 45.0% | |
| AATTGTGAGAGCAGAGTGGT+GGG | - | chr5_4:12106114-12106133 | Msa0837980:CDS | 45.0% | |
| !! | ATAAATTTATATACTAAAAA+TGG | - | chr5_4:12105419-12105438 | Msa0837980:CDS | 5.0% |
| !! | AAAAAGTTAATATATTTATA+AGG | + | chr5_4:12106209-12106228 | None:intergenic | 5.0% |
| !! | AAAAAATATAGTTAAAAATA+GGG | + | chr5_4:12106300-12106319 | None:intergenic | 5.0% |
| !! | AAAAAAATATAGTTAAAAAT+AGG | + | chr5_4:12106301-12106320 | None:intergenic | 5.0% |
| !! | ATAAATTTATATACTAAAAA+TGG | - | chr5_4:12105419-12105438 | Msa0837980:CDS | 5.0% |
| !! | AAAAAGTTAATATATTTATA+AGG | + | chr5_4:12106209-12106228 | None:intergenic | 5.0% |
| !! | AAAAAATATAGTTAAAAATA+GGG | + | chr5_4:12106300-12106319 | None:intergenic | 5.0% |
| !! | AAAAAAATATAGTTAAAAAT+AGG | + | chr5_4:12106301-12106320 | None:intergenic | 5.0% |
| GTGTTCTTCCATGACCCTGA+TGG | - | chr5_4:12105765-12105784 | Msa0837980:intron | 50.0% | |
| TCATGTAGCCATCAGGGTCA+TGG | + | chr5_4:12105776-12105795 | None:intergenic | 50.0% | |
| CTGCATGAATCCTCCACACT+TGG | + | chr5_4:12105901-12105920 | None:intergenic | 50.0% | |
| GTGTTCTTCCATGACCCTGA+TGG | - | chr5_4:12105765-12105784 | Msa0837980:intron | 50.0% | |
| TCATGTAGCCATCAGGGTCA+TGG | + | chr5_4:12105776-12105795 | None:intergenic | 50.0% | |
| CTGCATGAATCCTCCACACT+TGG | + | chr5_4:12105901-12105920 | None:intergenic | 50.0% | |
| !! | AGAGCAGAGTGGTGGGTCCA+AGG | - | chr5_4:12106121-12106140 | Msa0837980:CDS | 60.0% |
| !! | AGAGCAGAGTGGTGGGTCCA+AGG | - | chr5_4:12106121-12106140 | Msa0837980:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 12104892 | 12106339 | 12104892 | ID=Msa0837980;Name=Msa0837980 |
| chr5_4 | mRNA | 12104892 | 12106339 | 12104892 | ID=Msa0837980-mRNA-1;Parent=Msa0837980;Name=Msa0837980-mRNA-1;_AED=0.15;_eAED=0.15;_QI=26|1|1|1|1|1|3|368|207 |
| chr5_4 | exon | 12104892 | 12105562 | 12104892 | ID=Msa0837980-mRNA-1:exon:5381;Parent=Msa0837980-mRNA-1 |
| chr5_4 | exon | 12105882 | 12105999 | 12105882 | ID=Msa0837980-mRNA-1:exon:5380;Parent=Msa0837980-mRNA-1 |
| chr5_4 | exon | 12106111 | 12106339 | 12106111 | ID=Msa0837980-mRNA-1:exon:5379;Parent=Msa0837980-mRNA-1 |
| chr5_4 | five_prime_UTR | 12106314 | 12106339 | 12106314 | ID=Msa0837980-mRNA-1:five_prime_utr;Parent=Msa0837980-mRNA-1 |
| chr5_4 | CDS | 12106111 | 12106313 | 12106111 | ID=Msa0837980-mRNA-1:cds;Parent=Msa0837980-mRNA-1 |
| chr5_4 | CDS | 12105882 | 12105999 | 12105882 | ID=Msa0837980-mRNA-1:cds;Parent=Msa0837980-mRNA-1 |
| chr5_4 | CDS | 12105260 | 12105562 | 12105260 | ID=Msa0837980-mRNA-1:cds;Parent=Msa0837980-mRNA-1 |
| chr5_4 | three_prime_UTR | 12104892 | 12105259 | 12104892 | ID=Msa0837980-mRNA-1:three_prime_utr;Parent=Msa0837980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
