Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397250 | XP_024632051.1 | 97.044 | 203 | 6 | 0 | 1 | 203 | 1 | 203 | 3.08e-143 | 413 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397250 | A0A396JGY9 | 97.044 | 203 | 6 | 0 | 1 | 203 | 1 | 203 | 1.47e-143 | 413 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa1397250 | 0.838069 | 3.579077e-57 | -8.615850e-47 |
| Msa0017510 | Msa1397250 | 0.842224 | 2.947286e-58 | -8.615850e-47 |
| Msa0036960 | Msa1397250 | 0.832775 | 7.796673e-56 | -8.615850e-47 |
| Msa0044100 | Msa1397250 | 0.806370 | 8.501560e-50 | -8.615850e-47 |
| Msa0045770 | Msa1397250 | 0.835715 | 1.427599e-56 | -8.615850e-47 |
| Msa0048000 | Msa1397250 | 0.801462 | 8.904071e-49 | -8.615850e-47 |
| Msa0051790 | Msa1397250 | 0.826792 | 2.232857e-54 | -8.615850e-47 |
| Msa0072370 | Msa1397250 | 0.814490 | 1.500140e-51 | -8.615850e-47 |
| Msa0089360 | Msa1397250 | 0.810213 | 1.288826e-50 | -8.615850e-47 |
| Msa0095540 | Msa1397250 | 0.813194 | 2.895581e-51 | -8.615850e-47 |
| Msa0112750 | Msa1397250 | 0.851601 | 7.980775e-61 | -8.615850e-47 |
| Msa1353060 | Msa1397250 | 0.815912 | 7.248659e-52 | -8.615850e-47 |
| Msa1353470 | Msa1397250 | 0.821996 | 2.999254e-53 | -8.615850e-47 |
| Msa1370090 | Msa1397250 | 0.804081 | 2.563038e-49 | -8.615850e-47 |
| Msa1385670 | Msa1397250 | 0.804010 | 2.652559e-49 | -8.615850e-47 |
| Msa1395870 | Msa1397250 | 0.819428 | 1.167510e-52 | -8.615850e-47 |
| Msa1397250 | Msa1397340 | 0.812256 | 4.644637e-51 | -8.615850e-47 |
| Msa1397250 | Msa1397860 | 0.801558 | 8.507096e-49 | -8.615850e-47 |
| Msa1397250 | Msa1399480 | 0.826567 | 2.526730e-54 | -8.615850e-47 |
| Msa1397250 | Msa1399560 | 0.836290 | 1.020486e-56 | -8.615850e-47 |
| Msa1397250 | Msa1401150 | 0.946567 | 3.607081e-105 | -8.615850e-47 |
| Msa1397250 | Msa1402590 | 0.817682 | 2.904779e-52 | -8.615850e-47 |
| Msa1397250 | Msa1424450 | 0.810325 | 1.219366e-50 | -8.615850e-47 |
| Msa1397250 | Msa1425100 | 0.800364 | 1.492280e-48 | -8.615850e-47 |
| Msa1397250 | Msa1437190 | 0.809822 | 1.565132e-50 | -8.615850e-47 |
| Msa1397250 | Msa1438250 | 0.804996 | 1.652280e-49 | -8.615850e-47 |
| Msa1397250 | Msa1440340 | 0.800292 | 1.543298e-48 | -8.615850e-47 |
| Msa1397250 | Msa1443840 | 0.821927 | 3.111820e-53 | -8.615850e-47 |
| Msa1397250 | Msa1460380 | 0.823208 | 1.567542e-53 | -8.615850e-47 |
| Msa1397250 | Msa1460390 | 0.816472 | 5.432908e-52 | -8.615850e-47 |
| Msa1397250 | Msa1460890 | 0.812748 | 3.627431e-51 | -8.615850e-47 |
| Msa1397250 | Msa1463670 | 0.821866 | 3.214730e-53 | -8.615850e-47 |
| Msa1397250 | Msa1466540 | 0.805821 | 1.109219e-49 | -8.615850e-47 |
| Msa0609430 | Msa1397250 | 0.858484 | 7.983632e-63 | -8.615850e-47 |
| Msa0611380 | Msa1397250 | 0.848011 | 8.041572e-60 | -8.615850e-47 |
| Msa0619990 | Msa1397250 | 0.821606 | 3.692347e-53 | -8.615850e-47 |
| Msa0623150 | Msa1397250 | 0.810533 | 1.099666e-50 | -8.615850e-47 |
| Msa0626090 | Msa1397250 | 0.802437 | 5.612173e-49 | -8.615850e-47 |
| Msa0628640 | Msa1397250 | 0.808846 | 2.534417e-50 | -8.615850e-47 |
| Msa0631120 | Msa1397250 | 0.860811 | 1.592436e-63 | -8.615850e-47 |
| Msa0635610 | Msa1397250 | 0.803381 | 3.582889e-49 | -8.615850e-47 |
| Msa0638070 | Msa1397250 | 0.800594 | 1.339206e-48 | -8.615850e-47 |
| Msa0644980 | Msa1397250 | 0.809978 | 1.448526e-50 | -8.615850e-47 |
| Msa0647980 | Msa1397250 | 0.816297 | 5.947880e-52 | -8.615850e-47 |
| Msa0650070 | Msa1397250 | 0.823505 | 1.335917e-53 | -8.615850e-47 |
| Msa0657970 | Msa1397250 | 0.818227 | 2.187937e-52 | -8.615850e-47 |
| Msa0666030 | Msa1397250 | 0.858977 | 5.684669e-63 | -8.615850e-47 |
| Msa0669340 | Msa1397250 | 0.868107 | 8.350207e-66 | -8.615850e-47 |
| Msa0684500 | Msa1397250 | 0.843993 | 9.954289e-59 | -8.615850e-47 |
| Msa0692060 | Msa1397250 | 0.837173 | 6.076517e-57 | -8.615850e-47 |
| Msa0693380 | Msa1397250 | 0.802471 | 5.522090e-49 | -8.615850e-47 |
| Msa0696640 | Msa1397250 | 0.810703 | 1.010406e-50 | -8.615850e-47 |
| Msa0706420 | Msa1397250 | 0.828854 | 7.130729e-55 | -8.615850e-47 |
| Msa0709500 | Msa1397250 | 0.806823 | 6.822852e-50 | -8.615850e-47 |
| Msa0716450 | Msa1397250 | 0.851807 | 6.978361e-61 | -8.615850e-47 |
| Msa0717260 | Msa1397250 | 0.861350 | 1.091172e-63 | -8.615850e-47 |
| Msa0742380 | Msa1397250 | 0.800264 | 1.563751e-48 | -8.615850e-47 |
| Msa0745790 | Msa1397250 | 0.806853 | 6.724136e-50 | -8.615850e-47 |
| Msa0750880 | Msa1397250 | 0.815260 | 1.012682e-51 | -8.615850e-47 |
| Msa0758320 | Msa1397250 | 0.855741 | 5.147947e-62 | -8.615850e-47 |
| Msa0761940 | Msa1397250 | 0.804154 | 2.475071e-49 | -8.615850e-47 |
| Msa0775440 | Msa1397250 | 0.817356 | 3.440507e-52 | -8.615850e-47 |
| Msa0793640 | Msa1397250 | 0.811233 | 7.757010e-51 | -8.615850e-47 |
| Msa0799030 | Msa1397250 | 0.823399 | 1.414317e-53 | -8.615850e-47 |
| Msa0799700 | Msa1397250 | 0.810000 | 1.432902e-50 | -8.615850e-47 |
| Msa0803890 | Msa1397250 | 0.824572 | 7.505338e-54 | -8.615850e-47 |
| Msa0812820 | Msa1397250 | 0.827846 | 1.248582e-54 | -8.615850e-47 |
| Msa0824660 | Msa1397250 | 0.800156 | 1.644774e-48 | -8.615850e-47 |
| Msa0837440 | Msa1397250 | 0.825208 | 5.311840e-54 | -8.615850e-47 |
| Msa0837980 | Msa1397250 | 0.854285 | 1.362778e-61 | -8.615850e-47 |
| Msa0840820 | Msa1397250 | 0.801613 | 8.288819e-49 | -8.615850e-47 |
| Msa0133130 | Msa1397250 | 0.801584 | 8.406093e-49 | -8.615850e-47 |
| Msa0140780 | Msa1397250 | 0.800106 | 1.683622e-48 | -8.615850e-47 |
| Msa0141100 | Msa1397250 | 0.868026 | 8.865612e-66 | -8.615850e-47 |
| Msa0157100 | Msa1397250 | 0.806354 | 8.568389e-50 | -8.615850e-47 |
| Msa0157290 | Msa1397250 | 0.841877 | 3.639473e-58 | -8.615850e-47 |
| Msa0163980 | Msa1397250 | 0.811125 | 8.186742e-51 | -8.615850e-47 |
| Msa0169860 | Msa1397250 | 0.806463 | 8.126713e-50 | -8.615850e-47 |
| Msa0183750 | Msa1397250 | 0.811677 | 6.212320e-51 | -8.615850e-47 |
| Msa0191040 | Msa1397250 | 0.829115 | 6.166377e-55 | -8.615850e-47 |
| Msa0197930 | Msa1397250 | 0.818393 | 2.006498e-52 | -8.615850e-47 |
| Msa0205850 | Msa1397250 | 0.817846 | 2.667628e-52 | -8.615850e-47 |
| Msa0216240 | Msa1397250 | 0.808177 | 3.521027e-50 | -8.615850e-47 |
| Msa0220300 | Msa1397250 | 0.823097 | 1.663992e-53 | -8.615850e-47 |
| Msa0220580 | Msa1397250 | 0.813701 | 2.240181e-51 | -8.615850e-47 |
| Msa0225600 | Msa1397250 | 0.976638 | 3.276889e-142 | -8.615850e-47 |
| Msa0233340 | Msa1397250 | 0.829438 | 5.148070e-55 | -8.615850e-47 |
| Msa0236440 | Msa1397250 | 0.830752 | 2.460614e-55 | -8.615850e-47 |
| Msa1227970 | Msa1397250 | 0.800206 | 1.606454e-48 | -8.615850e-47 |
| Msa1254700 | Msa1397250 | 0.843861 | 1.079914e-58 | -8.615850e-47 |
| Msa1255280 | Msa1397250 | 0.816066 | 6.698081e-52 | -8.615850e-47 |
| Msa1266960 | Msa1397250 | 0.834898 | 2.296411e-56 | -8.615850e-47 |
| Msa1267960 | Msa1397250 | 0.816612 | 5.056383e-52 | -8.615850e-47 |
| Msa1289280 | Msa1397250 | 0.814138 | 1.794727e-51 | -8.615850e-47 |
| Msa1291870 | Msa1397250 | 0.835316 | 1.801408e-56 | -8.615850e-47 |
| Msa1300870 | Msa1397250 | 0.806690 | 7.276911e-50 | -8.615850e-47 |
| Msa1303250 | Msa1397250 | 0.813763 | 2.171474e-51 | -8.615850e-47 |
| Msa1305340 | Msa1397250 | 0.803615 | 3.202799e-49 | -8.615850e-47 |
| Msa1314340 | Msa1397250 | 0.802211 | 6.247478e-49 | -8.615850e-47 |
| Msa1318990 | Msa1397250 | 0.813040 | 3.130135e-51 | -8.615850e-47 |
| Msa1331910 | Msa1397250 | 0.819208 | 1.310529e-52 | -8.615850e-47 |
| Msa1331920 | Msa1397250 | 0.801029 | 1.091732e-48 | -8.615850e-47 |
| Msa1342900 | Msa1397250 | 0.803723 | 3.041999e-49 | -8.615850e-47 |
| Msa0366240 | Msa1397250 | 0.801196 | 1.009069e-48 | -8.615850e-47 |
| Msa0374850 | Msa1397250 | 0.865496 | 5.661776e-65 | -8.615850e-47 |
| Msa0375090 | Msa1397250 | 0.854323 | 1.329210e-61 | -8.615850e-47 |
| Msa0379640 | Msa1397250 | 0.802303 | 5.979849e-49 | -8.615850e-47 |
| Msa0402290 | Msa1397250 | 0.813623 | 2.330216e-51 | -8.615850e-47 |
| Msa0407920 | Msa1397250 | 0.804537 | 2.059995e-49 | -8.615850e-47 |
| Msa0425400 | Msa1397250 | 0.816309 | 5.910468e-52 | -8.615850e-47 |
| Msa0426360 | Msa1397250 | 0.801162 | 1.025584e-48 | -8.615850e-47 |
| Msa0426400 | Msa1397250 | 0.808617 | 2.836256e-50 | -8.615850e-47 |
| Msa0461730 | Msa1397250 | 0.825592 | 4.309397e-54 | -8.615850e-47 |
| Msa0470340 | Msa1397250 | 0.855936 | 4.513970e-62 | -8.615850e-47 |
| Msa0470860 | Msa1397250 | 0.829005 | 6.557604e-55 | -8.615850e-47 |
| Msa0480950 | Msa1397250 | 0.803600 | 3.226325e-49 | -8.615850e-47 |
| Msa0481110 | Msa1397250 | 0.813851 | 2.076476e-51 | -8.615850e-47 |
| Msa1002620 | Msa1397250 | 0.822445 | 2.360259e-53 | -8.615850e-47 |
| Msa1003750 | Msa1397250 | 0.805197 | 1.499641e-49 | -8.615850e-47 |
| Msa1013400 | Msa1397250 | 0.804575 | 2.022922e-49 | -8.615850e-47 |
| Msa1040400 | Msa1397250 | 0.818734 | 1.679812e-52 | -8.615850e-47 |
| Msa1082500 | Msa1397250 | 0.835468 | 1.649137e-56 | -8.615850e-47 |
| Msa1083150 | Msa1397250 | 0.805851 | 1.093334e-49 | -8.615850e-47 |
| Msa0243100 | Msa1397250 | 0.804360 | 2.242609e-49 | -8.615850e-47 |
| Msa0244860 | Msa1397250 | 0.801344 | 9.410391e-49 | -8.615850e-47 |
| Msa0251240 | Msa1397250 | 0.822190 | 2.703852e-53 | -8.615850e-47 |
| Msa0258760 | Msa1397250 | 0.809023 | 2.322142e-50 | -8.615850e-47 |
| Msa0260810 | Msa1397250 | 0.805720 | 1.164926e-49 | -8.615850e-47 |
| Msa0266450 | Msa1397250 | 0.968701 | 4.711597e-129 | -8.615850e-47 |
| Msa0271040 | Msa1397250 | 0.811647 | 6.305275e-51 | -8.615850e-47 |
| Msa0282210 | Msa1397250 | 0.824930 | 6.181752e-54 | -8.615850e-47 |
| Msa0282250 | Msa1397250 | 0.803680 | 3.104964e-49 | -8.615850e-47 |
| Msa0287650 | Msa1397250 | 0.812038 | 5.183216e-51 | -8.615850e-47 |
| Msa0290010 | Msa1397250 | 0.804067 | 2.581062e-49 | -8.615850e-47 |
| Msa0309350 | Msa1397250 | 0.814871 | 1.235727e-51 | -8.615850e-47 |
| Msa0311690 | Msa1397250 | 0.818309 | 2.096632e-52 | -8.615850e-47 |
| Msa0333930 | Msa1397250 | 0.813962 | 1.962813e-51 | -8.615850e-47 |
| Msa0334360 | Msa1397250 | 0.811698 | 6.145492e-51 | -8.615850e-47 |
| Msa0334500 | Msa1397250 | 0.802091 | 6.613341e-49 | -8.615850e-47 |
| Msa0337540 | Msa1397250 | 0.815571 | 8.633814e-52 | -8.615850e-47 |
| Msa1125760 | Msa1397250 | 0.826159 | 3.161783e-54 | -8.615850e-47 |
| Msa1140690 | Msa1397250 | 0.801130 | 1.040916e-48 | -8.615850e-47 |
| Msa1147900 | Msa1397250 | 0.824609 | 7.357584e-54 | -8.615850e-47 |
| Msa1170730 | Msa1397250 | 0.808136 | 3.591361e-50 | -8.615850e-47 |
| Msa1171360 | Msa1397250 | 0.805450 | 1.327417e-49 | -8.615850e-47 |
| Msa1172450 | Msa1397250 | 0.812886 | 3.382602e-51 | -8.615850e-47 |
| Msa1172670 | Msa1397250 | 0.854295 | 1.353453e-61 | -8.615850e-47 |
| Msa1179460 | Msa1397250 | 0.831266 | 1.840376e-55 | -8.615850e-47 |
| Msa1190120 | Msa1397250 | 0.806123 | 9.585572e-50 | -8.615850e-47 |
| Msa1193290 | Msa1397250 | 0.812341 | 4.452048e-51 | -8.615850e-47 |
| Msa1197590 | Msa1397250 | 0.840211 | 9.966671e-58 | -8.615850e-47 |
| Msa1201890 | Msa1397250 | 0.803465 | 3.441510e-49 | -8.615850e-47 |
| Msa1203000 | Msa1397250 | 0.822492 | 2.300866e-53 | -8.615850e-47 |
| Msa1205960 | Msa1397250 | 0.809100 | 2.235640e-50 | -8.615850e-47 |
| Msa1214880 | Msa1397250 | 0.810444 | 1.148959e-50 | -8.615850e-47 |
| Msa1214890 | Msa1397250 | 0.813098 | 3.039081e-51 | -8.615850e-47 |
| Msa1217940 | Msa1397250 | 0.824737 | 6.863335e-54 | -8.615850e-47 |
| Msa1218480 | Msa1397250 | 0.812401 | 4.320200e-51 | -8.615850e-47 |
| Msa1218600 | Msa1397250 | 0.803938 | 2.745609e-49 | -8.615850e-47 |
| Msa1219260 | Msa1397250 | 0.839214 | 1.811479e-57 | -8.615850e-47 |
| Msa1221050 | Msa1397250 | 0.805409 | 1.353396e-49 | -8.615850e-47 |
| Msa0484780 | Msa1397250 | 0.845961 | 2.929643e-59 | -8.615850e-47 |
| Msa0503580 | Msa1397250 | 0.804723 | 1.883806e-49 | -8.615850e-47 |
| Msa0512900 | Msa1397250 | 0.823343 | 1.457690e-53 | -8.615850e-47 |
| Msa0523460 | Msa1397250 | 0.820035 | 8.482527e-53 | -8.615850e-47 |
| Msa0531430 | Msa1397250 | 0.875235 | 3.616785e-68 | -8.615850e-47 |
| Msa0534570 | Msa1397250 | 0.808983 | 2.368725e-50 | -8.615850e-47 |
| Msa0534590 | Msa1397250 | 0.874219 | 8.010464e-68 | -8.615850e-47 |
| Msa0548620 | Msa1397250 | 0.829855 | 4.074390e-55 | -8.615850e-47 |
| Msa0548660 | Msa1397250 | 0.815207 | 1.040696e-51 | -8.615850e-47 |
| Msa0551890 | Msa1397250 | 0.820386 | 7.049549e-53 | -8.615850e-47 |
| Msa0574460 | Msa1397250 | 0.800737 | 1.252738e-48 | -8.615850e-47 |
| Msa0590800 | Msa1397250 | 0.854041 | 1.603092e-61 | -8.615850e-47 |
| Msa0853320 | Msa1397250 | 0.823161 | 1.607244e-53 | -8.615850e-47 |
| Msa0858840 | Msa1397250 | 0.813739 | 2.197184e-51 | -8.615850e-47 |
| Msa0880140 | Msa1397250 | 0.841686 | 4.087230e-58 | -8.615850e-47 |
| Msa0880710 | Msa1397250 | 0.803724 | 3.040364e-49 | -8.615850e-47 |
| Msa0880970 | Msa1397250 | 0.817469 | 3.244404e-52 | -8.615850e-47 |
| Msa0933230 | Msa1397250 | 0.823467 | 1.363451e-53 | -8.615850e-47 |
| Msa0933310 | Msa1397250 | 0.827628 | 1.408482e-54 | -8.615850e-47 |
| Msa0954130 | Msa1397250 | 0.822629 | 2.138086e-53 | -8.615850e-47 |
| Msa0954550 | Msa1397250 | 0.804284 | 2.325788e-49 | -8.615850e-47 |
| Msa0968590 | Msa1397250 | 0.806498 | 7.989623e-50 | -8.615850e-47 |
| Msa0971090 | Msa1397250 | 0.820546 | 6.479433e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397250 | MtrunA17_Chr2g0331861 | 97.044 | 203 | 6 | 0 | 1 | 203 | 1 | 203 | 2.84e-147 | 413 |
| Msa1397250 | MtrunA17_Chr6g0485381 | 35.000 | 180 | 107 | 3 | 41 | 214 | 71 | 246 | 4.80e-32 | 120 |
| Msa1397250 | MtrunA17_Chr4g0004451 | 36.496 | 137 | 86 | 1 | 41 | 177 | 27 | 162 | 1.65e-26 | 103 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1397250 | AT1G52330.1 | 54.248 | 153 | 70 | 0 | 48 | 200 | 59 | 211 | 5.28e-60 | 192 |
| Msa1397250 | AT1G52330.2 | 53.731 | 134 | 62 | 0 | 48 | 181 | 59 | 192 | 3.45e-49 | 165 |
| Msa1397250 | AT4G13270.1 | 42.604 | 169 | 97 | 0 | 32 | 200 | 44 | 212 | 1.13e-43 | 150 |
Find 99 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTCTTCAGCTCTTCAATTT+TGG | 0.128265 | tig0022138:-66176 | None:intergenic |
| AAGAAAATGATTTACCTTAA+TGG | 0.212531 | tig0022138:-61574 | None:intergenic |
| TGAATTTGATGATTGATTAT+TGG | 0.230329 | tig0022138:-60940 | None:intergenic |
| AGAAAATGATTTACCTTAAT+GGG | 0.264332 | tig0022138:-61573 | None:intergenic |
| TAAACTATCATGTGCGGTTT+TGG | 0.291395 | tig0022138:+61718 | Msa1397250:CDS |
| TAGTCAAGTTAGGGGCAAAA+TGG | 0.292543 | tig0022138:+61530 | Msa1397250:CDS |
| AACATAGACACGTACAAATT+AGG | 0.320312 | tig0022138:+60889 | Msa1397250:five_prime_UTR |
| ATAATTCTGATGAAGAATTA+TGG | 0.326945 | tig0022138:+64666 | Msa1397250:CDS |
| CGCGTTCCTGAAGTAGTTCC+TGG | 0.331512 | tig0022138:-66540 | None:intergenic |
| TTGATACGGTTAGTCAAGTT+AGG | 0.332171 | tig0022138:+61520 | Msa1397250:CDS |
| GTTGAAGCTGAAGAAGATTA+AGG | 0.365406 | tig0022138:+61230 | Msa1397250:CDS |
| ATTATATTCCATTCTTGAAA+TGG | 0.366927 | tig0022138:-64648 | None:intergenic |
| TGAATCCACAAAGCAGCGTT+TGG | 0.384724 | tig0022138:+66204 | Msa1397250:CDS |
| TTAGTATATTTCAATGGAGT+TGG | 0.388212 | tig0022138:+66575 | Msa1397250:exon |
| TTGATGATTGATTATTGGTT+TGG | 0.395304 | tig0022138:-60935 | None:intergenic |
| AGTCAAGTTAGGGGCAAAAT+GGG | 0.396713 | tig0022138:+61531 | Msa1397250:CDS |
| ACTGTTATATTTCTCGCTTA+AGG | 0.400511 | tig0022138:-66269 | None:intergenic |
| TCTGATCCAGGAACTACTTC+AGG | 0.411288 | tig0022138:+66534 | Msa1397250:CDS |
| TGGTTTGGTGTAGGAAATTG+TGG | 0.419400 | tig0022138:-60920 | None:intergenic |
| AACTCCATTGAAATATACTA+AGG | 0.440384 | tig0022138:-66573 | None:intergenic |
| GAATGGGCACGTGAGGGCTA+TGG | 0.456284 | tig0022138:+61398 | Msa1397250:CDS |
| TGATACGGTTAGTCAAGTTA+GGG | 0.457996 | tig0022138:+61521 | Msa1397250:CDS |
| GGCTATGGGATCTTCATTTG+TGG | 0.458085 | tig0022138:+61413 | Msa1397250:CDS |
| CCTCATGAAGACAGTGTTGA+CGG | 0.462375 | tig0022138:-61766 | None:intergenic |
| CCCGTCCCAGAGTCTGATCC+AGG | 0.463701 | tig0022138:+66522 | Msa1397250:CDS |
| GCAAGCAGCCATTTCAAGAA+TGG | 0.468277 | tig0022138:+64640 | Msa1397250:CDS |
| TCCAACAACAACACTATCTC+AGG | 0.473538 | tig0022138:-61471 | None:intergenic |
| GGCACGTGACTTCGAAGAAT+GGG | 0.476369 | tig0022138:+61382 | Msa1397250:CDS |
| ACCTGAGATAGTGTTGTTGT+TGG | 0.476726 | tig0022138:+61470 | Msa1397250:CDS |
| AATGGGCACGTGAGGGCTAT+GGG | 0.477387 | tig0022138:+61399 | Msa1397250:CDS |
| AAATGTTGACGTTTATTCCA+TGG | 0.481008 | tig0022138:+61311 | Msa1397250:CDS |
| ACTTCCAGCTCTGACAACTT+TGG | 0.488730 | tig0022138:-66124 | None:intergenic |
| ACGGGGACTCCGATCGGAGG+TGG | 0.488905 | tig0022138:-66504 | None:intergenic |
| TGGTGGTGAATAAGAGTAAG+AGG | 0.489310 | tig0022138:-61164 | None:intergenic |
| AAATCCTTAGTATATTTCAA+TGG | 0.494490 | tig0022138:+66569 | Msa1397250:exon |
| GTAGTTCCTGGATCAGACTC+TGG | 0.494492 | tig0022138:-66528 | None:intergenic |
| GGGCACGTGACTTCGAAGAA+TGG | 0.502859 | tig0022138:+61381 | Msa1397250:CDS |
| GTTGTTGGAGGACCTTGCTA+AGG | 0.507070 | tig0022138:+61485 | Msa1397250:CDS |
| GATGCAGAATTCAGTGGTAT+TGG | 0.514947 | tig0022138:+61441 | Msa1397250:CDS |
| CCTGGATCAGACTCTGGGAC+GGG | 0.515585 | tig0022138:-66522 | None:intergenic |
| AGAACCAAAGTTGTCAGAGC+TGG | 0.517038 | tig0022138:+66120 | Msa1397250:intron |
| GACGTTTATTCCATGGACTT+TGG | 0.517964 | tig0022138:+61318 | Msa1397250:CDS |
| AACCGTACGATCTTGAGGTA+TGG | 0.521084 | tig0022138:-61210 | None:intergenic |
| AGCAGCGTTTGGAAAAGAAA+GGG | 0.528574 | tig0022138:+66215 | Msa1397250:CDS |
| ATTGATTATTGGTTTGGTGT+AGG | 0.532500 | tig0022138:-60929 | None:intergenic |
| TCTTATAGAGGGAAACCACT+TGG | 0.536597 | tig0022138:+61360 | Msa1397250:CDS |
| ATCGGAGGTGGTCTTGAAGA+TGG | 0.536628 | tig0022138:-66492 | None:intergenic |
| TCTGGGACGGGGACTCCGAT+CGG | 0.537597 | tig0022138:-66510 | None:intergenic |
| ACACTTACACACATCTCCTA+TGG | 0.538130 | tig0022138:+61070 | Msa1397250:CDS |
| AAGCAGCGTTTGGAAAAGAA+AGG | 0.541865 | tig0022138:+66214 | Msa1397250:CDS |
| GGGTATGATACCCTTTGATA+CGG | 0.543076 | tig0022138:+61506 | Msa1397250:CDS |
| TGAGATAGTGTTGTTGTTGG+AGG | 0.545985 | tig0022138:+61473 | Msa1397250:CDS |
| CTGGATCAGACTCTGGGACG+GGG | 0.547882 | tig0022138:-66521 | None:intergenic |
| CTTCGAAGAATGGGCACGTG+AGG | 0.549210 | tig0022138:+61391 | Msa1397250:CDS |
| ACGTGCATGTAACTCGAAAA+CGG | 0.551303 | tig0022138:-61137 | None:intergenic |
| TTGTTGGAGGACCTTGCTAA+GGG | 0.551961 | tig0022138:+61486 | Msa1397250:CDS |
| CACTCTCAACGTGAAGAGCA+TGG | 0.555106 | tig0022138:-61286 | None:intergenic |
| GATAGGTGGTGATGCTCTCA+AGG | 0.556282 | tig0022138:-66454 | None:intergenic |
| GTCAACAGCACCAAAGTCCA+TGG | 0.556982 | tig0022138:-61328 | None:intergenic |
| AACTTGACTAACCGTATCAA+AGG | 0.559559 | tig0022138:-61517 | None:intergenic |
| ACTTGACTAACCGTATCAAA+GGG | 0.561858 | tig0022138:-61516 | None:intergenic |
| GGTGTTGGTTGAAAGTAGAT+AGG | 0.562879 | tig0022138:-66471 | None:intergenic |
| ATCCATACCTCAAGATCGTA+CGG | 0.564124 | tig0022138:+61208 | Msa1397250:CDS |
| GCTTCAACCGTACGATCTTG+AGG | 0.564157 | tig0022138:-61215 | None:intergenic |
| ATCTTGAGGTATGGATCTGA+CGG | 0.564383 | tig0022138:-61201 | None:intergenic |
| CATGCTCTTCACGTTGAGAG+TGG | 0.566163 | tig0022138:+61287 | Msa1397250:CDS |
| GACGTGGCGGTATCTTATAG+AGG | 0.568477 | tig0022138:+61348 | Msa1397250:CDS |
| TACGAGGTTGGCATGGCCAT+AGG | 0.577314 | tig0022138:-61086 | None:intergenic |
| TTCGAAGTCACGTGCCCAAG+TGG | 0.585354 | tig0022138:-61375 | None:intergenic |
| GAAATATAACAGTGTTAGAG+AGG | 0.588321 | tig0022138:+66279 | Msa1397250:CDS |
| TGATCTGTACGAGGTTGGCA+TGG | 0.590247 | tig0022138:-61093 | None:intergenic |
| GGGACGGGGACTCCGATCGG+AGG | 0.591662 | tig0022138:-66507 | None:intergenic |
| GAGTTTGATCTGTACGAGGT+TGG | 0.594207 | tig0022138:-61098 | None:intergenic |
| GGTGGTCTTGAAGATGGTGT+TGG | 0.596345 | tig0022138:-66486 | None:intergenic |
| CTTATAGAGGGAAACCACTT+GGG | 0.598189 | tig0022138:+61361 | Msa1397250:CDS |
| TCCTGGATCAGACTCTGGGA+CGG | 0.598644 | tig0022138:-66523 | None:intergenic |
| TAGTTCCTGGATCAGACTCT+GGG | 0.601819 | tig0022138:-66527 | None:intergenic |
| TTCGAAGAATGGGCACGTGA+GGG | 0.610158 | tig0022138:+61392 | Msa1397250:CDS |
| GAAGAGCATGGAGATATCTA+CGG | 0.612242 | tig0022138:-61274 | None:intergenic |
| CGTGAGCTCTCTCAATGCAA+TGG | 0.617999 | tig0022138:+64689 | Msa1397250:CDS |
| GATACGGTTAGTCAAGTTAG+GGG | 0.618576 | tig0022138:+61522 | Msa1397250:CDS |
| GGACTTTGGTGCTGTTGACG+TGG | 0.632167 | tig0022138:+61332 | Msa1397250:CDS |
| TCTTCAAGACCACCTCCGAT+CGG | 0.639349 | tig0022138:+66495 | Msa1397250:CDS |
| ATAGGTTAAACTATCATGTG+CGG | 0.642382 | tig0022138:+61712 | Msa1397250:intron |
| AGGGTATCATACCCTTAGCA+AGG | 0.651835 | tig0022138:-61497 | None:intergenic |
| CCGTCAACACTGTCTTCATG+AGG | 0.652674 | tig0022138:+61766 | Msa1397250:CDS |
| GAGATATCTACGGTGATATG+CGG | 0.652943 | tig0022138:-61264 | None:intergenic |
| ACGTGGCGGTATCTTATAGA+GGG | 0.653035 | tig0022138:+61349 | Msa1397250:CDS |
| GAGCTCTCTCAATGCAATGG+TGG | 0.653924 | tig0022138:+64692 | Msa1397250:CDS |
| GTCAAGTTAGGGGCAAAATG+GGG | 0.655267 | tig0022138:+61532 | Msa1397250:CDS |
| GCAGCGTTTGGAAAAGAAAG+GGG | 0.660036 | tig0022138:+66216 | Msa1397250:CDS |
| TGACGGATAGAAAATATACA+TGG | 0.674941 | tig0022138:-61184 | None:intergenic |
| TTTGGTGTAGGAAATTGTGG+TGG | 0.676954 | tig0022138:-60917 | None:intergenic |
| CTTTGGTGCTGTTGACGTGG+CGG | 0.678358 | tig0022138:+61335 | Msa1397250:CDS |
| CAGCGTTTGGAAAAGAAAGG+GGG | 0.692657 | tig0022138:+66217 | Msa1397250:CDS |
| GATGCTGATGCAGAATTCAG+TGG | 0.701186 | tig0022138:+61435 | Msa1397250:CDS |
| CGGATAGAAAATATACATGG+TGG | 0.703288 | tig0022138:-61181 | None:intergenic |
| GTTGGTTGAAAGTAGATAGG+TGG | 0.718597 | tig0022138:-66468 | None:intergenic |
| ACGTGAGTTTGATCTGTACG+AGG | 0.736583 | tig0022138:-61102 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTAATAATTTGAGTT+AGG | + | tig0022138:61649-61668 | Msa1397250:intron | 10.0% |
| !! | ATATGATTTATAATCATAAT+TGG | + | tig0022138:62595-62614 | Msa1397250:intron | 10.0% |
| !!! | TTCATATATTTTAACATAAT+CGG | - | tig0022138:64249-64268 | None:intergenic | 10.0% |
| !!! | TTTTTTCTTTTCATTTTATT+AGG | + | tig0022138:64610-64629 | Msa1397250:intron | 10.0% |
| !!! | TTTTTCTTTTCATTTTATTA+GGG | + | tig0022138:64611-64630 | Msa1397250:intron | 10.0% |
| !!! | TTTAATTTGTGATTAATATT+GGG | + | tig0022138:65416-65435 | Msa1397250:intron | 10.0% |
| !!! | ATTTCAAAATATTTTGAATT+TGG | - | tig0022138:65528-65547 | None:intergenic | 10.0% |
| !! | ATGATTAAACTTATAAATTG+TGG | + | tig0022138:64114-64133 | Msa1397250:intron | 15.0% |
| !! | TGATTAAACTTATAAATTGT+GGG | + | tig0022138:64115-64134 | Msa1397250:intron | 15.0% |
| !! | AAAAATAAGAAGATATTTGA+AGG | + | tig0022138:64143-64162 | Msa1397250:intron | 15.0% |
| !!! | AAAAAACGATTTTTAATTGT+TGG | + | tig0022138:64329-64348 | Msa1397250:intron | 15.0% |
| !! | AAAAAATAATAAGAAGACAA+TGG | - | tig0022138:64738-64757 | None:intergenic | 15.0% |
| !!! | TATTTTTTTTTCAAAGAGAA+TGG | - | tig0022138:64851-64870 | None:intergenic | 15.0% |
| !!! | ATTCTCTTTGAAAAAAAAAT+AGG | + | tig0022138:64850-64869 | Msa1397250:intron | 15.0% |
| !!! | ATTTGAAAGTACTTTTAATT+TGG | + | tig0022138:64958-64977 | Msa1397250:intron | 15.0% |
| !!! | GTGAGTTTTTTTTTTTAAAT+TGG | + | tig0022138:65020-65039 | Msa1397250:intron | 15.0% |
| !! | GTCTTAGAAATTATTATTTA+GGG | + | tig0022138:65300-65319 | Msa1397250:intron | 15.0% |
| !! | TTCAAAAAAGTAAAATCATT+GGG | - | tig0022138:65371-65390 | None:intergenic | 15.0% |
| !! | TTTCAAAAAAGTAAAATCAT+TGG | - | tig0022138:65372-65391 | None:intergenic | 15.0% |
| !!! | GTTTAATTTGTGATTAATAT+TGG | + | tig0022138:65415-65434 | Msa1397250:intron | 15.0% |
| !!! | TTAATTTGTGATTAATATTG+GGG | + | tig0022138:65417-65436 | Msa1397250:intron | 15.0% |
| !!! | AAAATATTTTGAAATTGCAA+GGG | + | tig0022138:65533-65552 | Msa1397250:intron | 15.0% |
| !! | ATAGTAAATGGTTAAAATTA+AGG | - | tig0022138:66005-66024 | None:intergenic | 15.0% |
| !!! | TGAATTTGATGATTGATTAT+TGG | - | tig0022138:60943-60962 | None:intergenic | 20.0% |
| !! | AGAAAATGATTTACCTTAAT+GGG | - | tig0022138:61576-61595 | None:intergenic | 20.0% |
| !! | AAGAAAATGATTTACCTTAA+TGG | - | tig0022138:61577-61596 | None:intergenic | 20.0% |
| !!! | ATGATAATTTTCCCAATAAT+AGG | + | tig0022138:61694-61713 | Msa1397250:intron | 20.0% |
| !! | TGATAGTTTAACCTATTATT+GGG | - | tig0022138:61708-61727 | None:intergenic | 20.0% |
| !! | ATGATAGTTTAACCTATTAT+TGG | - | tig0022138:61709-61728 | None:intergenic | 20.0% |
| !! | TTGCTTCTTTAATTAAAATG+AGG | + | tig0022138:61840-61859 | Msa1397250:intron | 20.0% |
| !!! | ACATTGACTAAAAGAATTAT+TGG | + | tig0022138:61964-61983 | Msa1397250:intron | 20.0% |
| !!! | GAAACGAATTTTTATTTACT+TGG | + | tig0022138:62010-62029 | Msa1397250:intron | 20.0% |
| !!! | TTTTTTTCAACTCTTCAAAT+TGG | - | tig0022138:62189-62208 | None:intergenic | 20.0% |
| !!! | TCAGGTACATAATTTTTTTT+TGG | - | tig0022138:62405-62424 | None:intergenic | 20.0% |
| !! | TGGTACATATATATATACAA+CGG | - | tig0022138:62515-62534 | None:intergenic | 20.0% |
| !!! | GCTTTAAGTTTTAACATAAT+TGG | + | tig0022138:62682-62701 | Msa1397250:intron | 20.0% |
| !! | CATAATTGGTTATTATTTCA+CGG | + | tig0022138:62696-62715 | Msa1397250:intron | 20.0% |
| !!! | TGCAATATACGTTTAAAATA+GGG | - | tig0022138:62749-62768 | None:intergenic | 20.0% |
| !!! | ATGCAATATACGTTTAAAAT+AGG | - | tig0022138:62750-62769 | None:intergenic | 20.0% |
| !!! | GGATATTAATTTTTGGTTTA+GGG | - | tig0022138:62997-63016 | None:intergenic | 20.0% |
| !! | ATGCAATAATGATATAAACA+GGG | - | tig0022138:63156-63175 | None:intergenic | 20.0% |
| !! | AATGCAATAATGATATAAAC+AGG | - | tig0022138:63157-63176 | None:intergenic | 20.0% |
| !! | TTGCATTCAAACTAAAAATT+TGG | + | tig0022138:63170-63189 | Msa1397250:intron | 20.0% |
| !! | TGCATTCAAACTAAAAATTT+GGG | + | tig0022138:63171-63190 | Msa1397250:intron | 20.0% |
| !!! | ATTTTGACAAAAAAAGAAAG+AGG | - | tig0022138:63302-63321 | None:intergenic | 20.0% |
| !! | ATCACAATATAAAATTGTCA+AGG | - | tig0022138:63453-63472 | None:intergenic | 20.0% |
| !!! | CAATTTTTATAAGATCGAAT+TGG | + | tig0022138:63538-63557 | Msa1397250:intron | 20.0% |
| !! | AGTAAAAACGAAAAAATGTT+TGG | + | tig0022138:63679-63698 | Msa1397250:intron | 20.0% |
| !! | AATTCTTGCAACAAATAATA+AGG | + | tig0022138:63867-63886 | Msa1397250:intron | 20.0% |
| !!! | CGTTAAAAAAAGTTTTGTTT+TGG | + | tig0022138:64042-64061 | Msa1397250:intron | 20.0% |
| !! | GATTAAACTTATAAATTGTG+GGG | + | tig0022138:64116-64135 | Msa1397250:intron | 20.0% |
| !! | AGAAAGAAAGAAAGAAAAAA+AGG | - | tig0022138:64454-64473 | None:intergenic | 20.0% |
| !! | ATTATATTCCATTCTTGAAA+TGG | - | tig0022138:64651-64670 | None:intergenic | 20.0% |
| !! | ATAATTCTGATGAAGAATTA+TGG | + | tig0022138:64666-64685 | Msa1397250:CDS | 20.0% |
| !!! | AACGTTTTCAAATGAAAAAT+TGG | - | tig0022138:64997-65016 | None:intergenic | 20.0% |
| !!! | GAAGATTCTTGATTTTTTTT+GGG | - | tig0022138:65152-65171 | None:intergenic | 20.0% |
| !!! | AGAAGATTCTTGATTTTTTT+TGG | - | tig0022138:65153-65172 | None:intergenic | 20.0% |
| !! | GGTCTTAGAAATTATTATTT+AGG | + | tig0022138:65299-65318 | Msa1397250:intron | 20.0% |
| !!! | CAAAATATTTTGAAATTGCA+AGG | + | tig0022138:65532-65551 | Msa1397250:intron | 20.0% |
| !! | AAATCCTTAGTATATTTCAA+TGG | + | tig0022138:66569-66588 | Msa1397250:exon | 20.0% |
| !! | TTGATGATTGATTATTGGTT+TGG | - | tig0022138:60938-60957 | None:intergenic | 25.0% |
| !!! | TTTTCTTTAGGAGCTTTTTA+AGG | - | tig0022138:61022-61041 | None:intergenic | 25.0% |
| !! | GATTTTCATGGTTTTTCTTT+AGG | - | tig0022138:61034-61053 | None:intergenic | 25.0% |
| !!! | TGTTTCTTTTGAGATTTTCA+TGG | - | tig0022138:61046-61065 | None:intergenic | 25.0% |
| !! | ATTCTTTTACTTTCCCATTA+AGG | + | tig0022138:61560-61579 | Msa1397250:CDS | 25.0% |
| ! | ACATATGATTATGAAGAACT+TGG | - | tig0022138:61604-61623 | None:intergenic | 25.0% |
| ! | TTGAGTTAGGTTATAGTTTA+TGG | + | tig0022138:61662-61681 | Msa1397250:intron | 25.0% |
| ! | GTGTAAAATTATAAACCAAG+TGG | + | tig0022138:61882-61901 | Msa1397250:intron | 25.0% |
| ! | AAATTATAAACCAAGTGGTA+AGG | + | tig0022138:61887-61906 | Msa1397250:intron | 25.0% |
| !! | TGGTAAGGTTTATTTGTTAA+TGG | + | tig0022138:61902-61921 | Msa1397250:intron | 25.0% |
| !! | GGTAAGGTTTATTTGTTAAT+GGG | + | tig0022138:61903-61922 | Msa1397250:intron | 25.0% |
| ! | TAAACTTATATCTTTCCTTC+CGG | - | tig0022138:62043-62062 | None:intergenic | 25.0% |
| ! | AATAAGACTAAGCTAATGTT+TGG | + | tig0022138:62100-62119 | Msa1397250:intron | 25.0% |
| ! | AGTTGAAAAAAACGTATGTT+TGG | + | tig0022138:62197-62216 | Msa1397250:intron | 25.0% |
| !!! | TTTTTTTGGACAGAAAAATC+AGG | - | tig0022138:62391-62410 | None:intergenic | 25.0% |
| ! | GGTACATATATATATACAAC+GGG | - | tig0022138:62514-62533 | None:intergenic | 25.0% |
| ! | CAAGTACCAACTATTTAAAT+GGG | - | tig0022138:62544-62563 | None:intergenic | 25.0% |
| !! | GCAATATACGTTTAAAATAG+GGG | - | tig0022138:62748-62767 | None:intergenic | 25.0% |
| !!! | GGGATATTAATTTTTGGTTT+AGG | - | tig0022138:62998-63017 | None:intergenic | 25.0% |
| !! | AATCTGGGGATATTAATTTT+TGG | - | tig0022138:63004-63023 | None:intergenic | 25.0% |
| !! | AGAGATTTGAAATTCAATCT+GGG | - | tig0022138:63019-63038 | None:intergenic | 25.0% |
| !! | TAGAGATTTGAAATTCAATC+TGG | - | tig0022138:63020-63039 | None:intergenic | 25.0% |
| !!! | AAGAATAAGTTGGTGTATAA+TGG | - | tig0022138:63097-63116 | None:intergenic | 25.0% |
| ! | TTATACACCAACTTATTCTT+AGG | + | tig0022138:63097-63116 | Msa1397250:intron | 25.0% |
| ! | AATGAAAAAAATGAGAGAGA+TGG | - | tig0022138:63410-63429 | None:intergenic | 25.0% |
| ! | TAAGAAATGCTTGAATTTAG+AGG | + | tig0022138:63500-63519 | Msa1397250:intron | 25.0% |
| ! | GAAATCTTAATATATGACGA+AGG | + | tig0022138:63889-63908 | Msa1397250:intron | 25.0% |
| !!! | AAAAAAGTTTTGTTTTGGAG+AGG | + | tig0022138:64047-64066 | Msa1397250:intron | 25.0% |
| !!! | AGGAGTTTAAGTTGAAATAA+AGG | + | tig0022138:64163-64182 | Msa1397250:intron | 25.0% |
| !!! | AGTTTAAGTTGAAATAAAGG+AGG | + | tig0022138:64166-64185 | Msa1397250:intron | 25.0% |
| !!! | GTTTAAGTTGAAATAAAGGA+GGG | + | tig0022138:64167-64186 | Msa1397250:intron | 25.0% |
| !! | TAACTCTATTTTCAATCCAT+CGG | + | tig0022138:64410-64429 | Msa1397250:intron | 25.0% |
| !!! | ACCTTTGTTGTTGTTAAATT+AGG | + | tig0022138:64524-64543 | Msa1397250:intron | 25.0% |
| ! | ACCTAATTTAACAACAACAA+AGG | - | tig0022138:64528-64547 | None:intergenic | 25.0% |
| ! | TTGTTAAATTAGGTTATGTG+TGG | + | tig0022138:64534-64553 | Msa1397250:intron | 25.0% |
| ! | TAATAAGAAGACAATGGTAA+AGG | - | tig0022138:64732-64751 | None:intergenic | 25.0% |
| ! | CAAAGTGATTCATATTTGTA+GGG | - | tig0022138:64894-64913 | None:intergenic | 25.0% |
| ! | TCAAAGTGATTCATATTTGT+AGG | - | tig0022138:64895-64914 | None:intergenic | 25.0% |
| !!! | AGATCTTGTAGATTTGTTTT+GGG | - | tig0022138:65202-65221 | None:intergenic | 25.0% |
| ! | TTAATGAAATTGGGGATTTA+GGG | - | tig0022138:65348-65367 | None:intergenic | 25.0% |
| ! | ATCATTGGGTTAATGAAATT+GGG | - | tig0022138:65357-65376 | None:intergenic | 25.0% |
| ! | AATCATTGGGTTAATGAAAT+TGG | - | tig0022138:65358-65377 | None:intergenic | 25.0% |
| ! | AAAAAGACTTAATGTGCAAA+AGG | - | tig0022138:65618-65637 | None:intergenic | 25.0% |
| ! | TATATCCTTGTGTGAAATAT+TGG | + | tig0022138:65762-65781 | Msa1397250:intron | 25.0% |
| ! | TTAATCCAATATTTCACACA+AGG | - | tig0022138:65770-65789 | None:intergenic | 25.0% |
| !! | CGGTTAATTTAGATTTTTGT+TGG | - | tig0022138:65974-65993 | None:intergenic | 25.0% |
| ! | TTAAAATTAAGGTGAACACT+CGG | - | tig0022138:65994-66013 | None:intergenic | 25.0% |
| ! | TTATATAACCGATTACTACT+AGG | + | tig0022138:66045-66064 | Msa1397250:intron | 25.0% |
| ! | TATATAACCGATTACTACTA+GGG | + | tig0022138:66046-66065 | Msa1397250:intron | 25.0% |
| ! | CCAAATAAAAATAAATGTCG+AGG | - | tig0022138:66375-66394 | None:intergenic | 25.0% |
| !!! | CCTCGACATTTATTTTTATT+TGG | + | tig0022138:66372-66391 | Msa1397250:intron | 25.0% |
| ! | AATCATGTCAAATAACATAG+TGG | - | tig0022138:66413-66432 | None:intergenic | 25.0% |
| !!! | GATTTTTTTAGCTTAAGACA+AGG | + | tig0022138:66429-66448 | Msa1397250:intron | 25.0% |
| !! | GAAATATACTAAGGATTTTG+AGG | - | tig0022138:66567-66586 | None:intergenic | 25.0% |
| ! | AACTCCATTGAAATATACTA+AGG | - | tig0022138:66576-66595 | None:intergenic | 25.0% |
| ! | TTAGTATATTTCAATGGAGT+TGG | + | tig0022138:66575-66594 | Msa1397250:exon | 25.0% |
| AACATAGACACGTACAAATT+AGG | + | tig0022138:60889-60908 | Msa1397250:five_prime_UTR | 30.0% | |
| !! | ATTGATTATTGGTTTGGTGT+AGG | - | tig0022138:60932-60951 | None:intergenic | 30.0% |
| !!! | TTAGGAGCTTTTTAAGGTTT+TGG | - | tig0022138:61016-61035 | None:intergenic | 30.0% |
| ! | TGACGGATAGAAAATATACA+TGG | - | tig0022138:61187-61206 | None:intergenic | 30.0% |
| AAATGTTGACGTTTATTCCA+TGG | + | tig0022138:61311-61330 | Msa1397250:CDS | 30.0% | |
| ATAGGTTAAACTATCATGTG+CGG | + | tig0022138:61712-61731 | Msa1397250:intron | 30.0% | |
| AACAAATAAACCTTACCACT+TGG | - | tig0022138:61900-61919 | None:intergenic | 30.0% | |
| TTATTTACTTGGTCTCTTTC+CGG | + | tig0022138:62021-62040 | Msa1397250:intron | 30.0% | |
| ! | ACTAAGCTAATGTTTGGTTT+GGG | + | tig0022138:62106-62125 | Msa1397250:intron | 30.0% |
| TGAAAAAAACGTATGTTTGG+TGG | + | tig0022138:62200-62219 | Msa1397250:intron | 30.0% | |
| GAAAAAAACGTATGTTTGGT+GGG | + | tig0022138:62201-62220 | Msa1397250:intron | 30.0% | |
| ! | ATTTTGCATGTGTATGTGTT+CGG | + | tig0022138:62270-62289 | Msa1397250:intron | 30.0% |
| ! | ATTTTCTGATCATTCTTCAC+TGG | - | tig0022138:62485-62504 | None:intergenic | 30.0% |
| CCAAGTACCAACTATTTAAA+TGG | - | tig0022138:62545-62564 | None:intergenic | 30.0% | |
| ! | CCATTTAAATAGTTGGTACT+TGG | + | tig0022138:62542-62561 | Msa1397250:intron | 30.0% |
| ! | CGTTGATTAAACTACTCTTA+AGG | - | tig0022138:62663-62682 | None:intergenic | 30.0% |
| !! | AAATTGTCACTTTGTCACTT+TGG | + | tig0022138:62970-62989 | Msa1397250:intron | 30.0% |
| ! | GAGATTTGAAATTCAATCTG+GGG | - | tig0022138:63018-63037 | None:intergenic | 30.0% |
| GTAATATAGAGAATGAGAGA+TGG | + | tig0022138:63268-63287 | Msa1397250:intron | 30.0% | |
| GAATTTACACAAGTATACAC+AGG | + | tig0022138:63571-63590 | Msa1397250:intron | 30.0% | |
| CATATCATCCAAATACTCTT+GGG | - | tig0022138:63730-63749 | None:intergenic | 30.0% | |
| ACATATCATCCAAATACTCT+TGG | - | tig0022138:63731-63750 | None:intergenic | 30.0% | |
| !!! | GAGTTTCTTTATTTTTTGCG+TGG | - | tig0022138:63796-63815 | None:intergenic | 30.0% |
| AATTTACTCGTCAAATGATG+AGG | + | tig0022138:63917-63936 | Msa1397250:intron | 30.0% | |
| AATAGTAAAACACTCGTATC+AGG | - | tig0022138:63967-63986 | None:intergenic | 30.0% | |
| !!! | TACTGACTTGTGATTCTTTT+TGG | + | tig0022138:65084-65103 | Msa1397250:intron | 30.0% |
| AGCATGAATTATTCTTGATC+TGG | - | tig0022138:65113-65132 | None:intergenic | 30.0% | |
| !!! | GATCTTGTAGATTTGTTTTG+GGG | - | tig0022138:65201-65220 | None:intergenic | 30.0% |
| !! | CAGATCTTGTAGATTTGTTT+TGG | - | tig0022138:65203-65222 | None:intergenic | 30.0% |
| ! | TTCGAAAGATCTGAGTTTTA+TGG | + | tig0022138:65260-65279 | Msa1397250:intron | 30.0% |
| !! | TCGAAAGATCTGAGTTTTAT+GGG | + | tig0022138:65261-65280 | Msa1397250:intron | 30.0% |
| TATGGGCATTTGTATGATTT+CGG | + | tig0022138:65278-65297 | Msa1397250:intron | 30.0% | |
| GTTAATGAAATTGGGGATTT+AGG | - | tig0022138:65349-65368 | None:intergenic | 30.0% | |
| TCATTGGGTTAATGAAATTG+GGG | - | tig0022138:65356-65375 | None:intergenic | 30.0% | |
| !!! | GTTGTCAATTTTTTCCATGA+AGG | + | tig0022138:65501-65520 | Msa1397250:intron | 30.0% |
| ! | ATTTTGAATTTGGTCCTTCA+TGG | - | tig0022138:65518-65537 | None:intergenic | 30.0% |
| ATCTTTCATGCAACATTGAT+TGG | + | tig0022138:65854-65873 | Msa1397250:intron | 30.0% | |
| ACAGTCACATGTATAGTAAA+TGG | - | tig0022138:66017-66036 | None:intergenic | 30.0% | |
| AAACATTCCCTAGTAGTAAT+CGG | - | tig0022138:66056-66075 | None:intergenic | 30.0% | |
| ACTGTTATATTTCTCGCTTA+AGG | - | tig0022138:66272-66291 | None:intergenic | 30.0% | |
| GAAATATAACAGTGTTAGAG+AGG | + | tig0022138:66279-66298 | Msa1397250:CDS | 30.0% | |
| ! | ATTCTAGCTGAAAAATCAAG+TGG | + | tig0022138:66313-66332 | Msa1397250:CDS | 30.0% |
| CGGATAGAAAATATACATGG+TGG | - | tig0022138:61184-61203 | None:intergenic | 35.0% | |
| GTTGAAGCTGAAGAAGATTA+AGG | + | tig0022138:61230-61249 | Msa1397250:CDS | 35.0% | |
| ACTTGACTAACCGTATCAAA+GGG | - | tig0022138:61519-61538 | None:intergenic | 35.0% | |
| AACTTGACTAACCGTATCAA+AGG | - | tig0022138:61520-61539 | None:intergenic | 35.0% | |
| ! | TTGATACGGTTAGTCAAGTT+AGG | + | tig0022138:61520-61539 | Msa1397250:CDS | 35.0% |
| ! | TGATACGGTTAGTCAAGTTA+GGG | + | tig0022138:61521-61540 | Msa1397250:CDS | 35.0% |
| ! | TAAACTATCATGTGCGGTTT+TGG | + | tig0022138:61718-61737 | Msa1397250:CDS | 35.0% |
| TCACTTGAAGACACATAGTT+TGG | + | tig0022138:61928-61947 | Msa1397250:intron | 35.0% | |
| GACTAAGCTAATGTTTGGTT+TGG | + | tig0022138:62105-62124 | Msa1397250:intron | 35.0% | |
| ! | TTTTGCATGTGTATGTGTTC+GGG | + | tig0022138:62271-62290 | Msa1397250:intron | 35.0% |
| ACTATTTAAATGGGTGGTAG+TGG | - | tig0022138:62535-62554 | None:intergenic | 35.0% | |
| CTACCACCCATTTAAATAGT+TGG | + | tig0022138:62535-62554 | Msa1397250:intron | 35.0% | |
| GTACCAACTATTTAAATGGG+TGG | - | tig0022138:62541-62560 | None:intergenic | 35.0% | |
| !! | CAATTTTGATCCAAGCATTG+GGG | - | tig0022138:62570-62589 | None:intergenic | 35.0% |
| !! | GCAATTTTGATCCAAGCATT+GGG | - | tig0022138:62571-62590 | None:intergenic | 35.0% |
| !! | TGCAATTTTGATCCAAGCAT+TGG | - | tig0022138:62572-62591 | None:intergenic | 35.0% |
| TTCGTTATCACTTTAGTCTC+TGG | + | tig0022138:62864-62883 | Msa1397250:intron | 35.0% | |
| TCAGAGACCTAAGAATAAGT+TGG | - | tig0022138:63107-63126 | None:intergenic | 35.0% | |
| GTGCATACTTACTATCAGTT+AGG | + | tig0022138:63129-63148 | Msa1397250:intron | 35.0% | |
| CAACCAACTTCATCTCATTA+AGG | + | tig0022138:63353-63372 | Msa1397250:intron | 35.0% | |
| TCACATGCTTCATAGATAGA+TGG | + | tig0022138:63994-64013 | Msa1397250:intron | 35.0% | |
| ATGCTTCATAGATAGATGGT+AGG | + | tig0022138:63998-64017 | Msa1397250:intron | 35.0% | |
| !! | TCTCTTTTTCATCTCGATCT+AGG | + | tig0022138:64471-64490 | Msa1397250:intron | 35.0% |
| !! | CTCTTTTTCATCTCGATCTA+GGG | + | tig0022138:64472-64491 | Msa1397250:intron | 35.0% |
| TCAAAATGATCACCATTTGC+AGG | + | tig0022138:65591-65610 | Msa1397250:intron | 35.0% | |
| ! | TCTCTTCAGCTCTTCAATTT+TGG | - | tig0022138:66179-66198 | None:intergenic | 35.0% |
| AATAACATAGTGGTCAGTAC+AGG | - | tig0022138:66403-66422 | None:intergenic | 35.0% | |
| ! | TTTGGTGTAGGAAATTGTGG+TGG | - | tig0022138:60920-60939 | None:intergenic | 40.0% |
| !! | TGGTTTGGTGTAGGAAATTG+TGG | - | tig0022138:60923-60942 | None:intergenic | 40.0% |
| ACACTTACACACATCTCCTA+TGG | + | tig0022138:61070-61089 | Msa1397250:CDS | 40.0% | |
| ACGTGCATGTAACTCGAAAA+CGG | - | tig0022138:61140-61159 | None:intergenic | 40.0% | |
| ! | TGGTGGTGAATAAGAGTAAG+AGG | - | tig0022138:61167-61186 | None:intergenic | 40.0% |
| ATCTTGAGGTATGGATCTGA+CGG | - | tig0022138:61204-61223 | None:intergenic | 40.0% | |
| ATCCATACCTCAAGATCGTA+CGG | + | tig0022138:61208-61227 | Msa1397250:CDS | 40.0% | |
| GAGATATCTACGGTGATATG+CGG | - | tig0022138:61267-61286 | None:intergenic | 40.0% | |
| ! | GAAGAGCATGGAGATATCTA+CGG | - | tig0022138:61277-61296 | None:intergenic | 40.0% |
| GACGTTTATTCCATGGACTT+TGG | + | tig0022138:61318-61337 | Msa1397250:CDS | 40.0% | |
| TCTTATAGAGGGAAACCACT+TGG | + | tig0022138:61360-61379 | Msa1397250:CDS | 40.0% | |
| CTTATAGAGGGAAACCACTT+GGG | + | tig0022138:61361-61380 | Msa1397250:CDS | 40.0% | |
| GATGCAGAATTCAGTGGTAT+TGG | + | tig0022138:61441-61460 | Msa1397250:CDS | 40.0% | |
| ! | ACCTGAGATAGTGTTGTTGT+TGG | + | tig0022138:61470-61489 | Msa1397250:CDS | 40.0% |
| TCCAACAACAACACTATCTC+AGG | - | tig0022138:61474-61493 | None:intergenic | 40.0% | |
| ! | TGAGATAGTGTTGTTGTTGG+AGG | + | tig0022138:61473-61492 | Msa1397250:CDS | 40.0% |
| GGGTATGATACCCTTTGATA+CGG | + | tig0022138:61506-61525 | Msa1397250:CDS | 40.0% | |
| ! | GATACGGTTAGTCAAGTTAG+GGG | + | tig0022138:61522-61541 | Msa1397250:CDS | 40.0% |
| TAGTCAAGTTAGGGGCAAAA+TGG | + | tig0022138:61530-61549 | Msa1397250:CDS | 40.0% | |
| AGTCAAGTTAGGGGCAAAAT+GGG | + | tig0022138:61531-61550 | Msa1397250:CDS | 40.0% | |
| !! | TGTCACTTTGGTTTGTGCAT+TGG | - | tig0022138:62156-62175 | None:intergenic | 40.0% |
| TTCTGATCATTCTTCACTGG+TGG | - | tig0022138:62482-62501 | None:intergenic | 40.0% | |
| ACGGATATCATCCCAATGTT+GGG | + | tig0022138:62715-62734 | Msa1397250:intron | 40.0% | |
| ATATCATCCCAATGTTGGGT+TGG | + | tig0022138:62719-62738 | Msa1397250:intron | 40.0% | |
| CCACCTTAATGAGATGAAGT+TGG | - | tig0022138:63359-63378 | None:intergenic | 40.0% | |
| CCAACTTCATCTCATTAAGG+TGG | + | tig0022138:63356-63375 | Msa1397250:intron | 40.0% | |
| !! | CTCGAATACCCAAGAGTATT+TGG | + | tig0022138:63719-63738 | Msa1397250:intron | 40.0% |
| ! | GAGGGTATGTGAGCATAAAT+GGG | + | tig0022138:64185-64204 | Msa1397250:intron | 40.0% |
| AGGGTATGTGAGCATAAATG+GGG | + | tig0022138:64186-64205 | Msa1397250:intron | 40.0% | |
| ! | CTCTATTTTCAATCCATCGG+AGG | + | tig0022138:64413-64432 | Msa1397250:intron | 40.0% |
| ! | ATTGGGGATTTAGGGTAAAG+AGG | - | tig0022138:65340-65359 | None:intergenic | 40.0% |
| ATGACATGACTTACGTGACT+AGG | - | tig0022138:65467-65486 | None:intergenic | 40.0% | |
| AAGCAGCGTTTGGAAAAGAA+AGG | + | tig0022138:66214-66233 | Msa1397250:CDS | 40.0% | |
| AGCAGCGTTTGGAAAAGAAA+GGG | + | tig0022138:66215-66234 | Msa1397250:CDS | 40.0% | |
| GGCTAATACAGTAACTTGAG+AGG | - | tig0022138:66354-66373 | None:intergenic | 40.0% | |
| GTTGGTTGAAAGTAGATAGG+TGG | - | tig0022138:66471-66490 | None:intergenic | 40.0% | |
| !! | GGTGTTGGTTGAAAGTAGAT+AGG | - | tig0022138:66474-66493 | None:intergenic | 40.0% |
| GAGTTTGATCTGTACGAGGT+TGG | - | tig0022138:61101-61120 | None:intergenic | 45.0% | |
| ACGTGAGTTTGATCTGTACG+AGG | - | tig0022138:61105-61124 | None:intergenic | 45.0% | |
| AACCGTACGATCTTGAGGTA+TGG | - | tig0022138:61213-61232 | None:intergenic | 45.0% | |
| ACGTGGCGGTATCTTATAGA+GGG | + | tig0022138:61349-61368 | Msa1397250:CDS | 45.0% | |
| GGCTATGGGATCTTCATTTG+TGG | + | tig0022138:61413-61432 | Msa1397250:CDS | 45.0% | |
| GATGCTGATGCAGAATTCAG+TGG | + | tig0022138:61435-61454 | Msa1397250:CDS | 45.0% | |
| TTGTTGGAGGACCTTGCTAA+GGG | + | tig0022138:61486-61505 | Msa1397250:CDS | 45.0% | |
| ! | AGGGTATCATACCCTTAGCA+AGG | - | tig0022138:61500-61519 | None:intergenic | 45.0% |
| GTCAAGTTAGGGGCAAAATG+GGG | + | tig0022138:61532-61551 | Msa1397250:CDS | 45.0% | |
| ! | CCTCATGAAGACAGTGTTGA+CGG | - | tig0022138:61769-61788 | None:intergenic | 45.0% |
| TTACTTGGTCTCTTTCCGGA+AGG | + | tig0022138:62025-62044 | Msa1397250:intron | 45.0% | |
| ! | GGAGCTTCTCAATGTCACTT+TGG | - | tig0022138:62168-62187 | None:intergenic | 45.0% |
| CACGGATATCATCCCAATGT+TGG | + | tig0022138:62714-62733 | Msa1397250:intron | 45.0% | |
| GACAGTGAGCTGCAAAGTTA+TGG | - | tig0022138:62796-62815 | None:intergenic | 45.0% | |
| ACACTCGTATCAGGTACGTA+CGG | - | tig0022138:63958-63977 | None:intergenic | 45.0% | |
| ! | GGAGGGTATGTGAGCATAAA+TGG | + | tig0022138:64184-64203 | Msa1397250:intron | 45.0% |
| GTATGTGAGCATAAATGGGG+TGG | + | tig0022138:64189-64208 | Msa1397250:intron | 45.0% | |
| GCAAGCAGCCATTTCAAGAA+TGG | + | tig0022138:64640-64659 | Msa1397250:CDS | 45.0% | |
| TGTGCAAAAGGTCCTGCAAA+TGG | - | tig0022138:65606-65625 | None:intergenic | 45.0% | |
| ! | TTTTCACCTTGCTAGTGCAG+TGG | + | tig0022138:65935-65954 | Msa1397250:intron | 45.0% |
| TTTCACCTTGCTAGTGCAGT+GGG | + | tig0022138:65936-65955 | Msa1397250:intron | 45.0% | |
| AGAACCAAAGTTGTCAGAGC+TGG | + | tig0022138:66120-66139 | Msa1397250:intron | 45.0% | |
| ! | ACTTCCAGCTCTGACAACTT+TGG | - | tig0022138:66127-66146 | None:intergenic | 45.0% |
| TGAATCCACAAAGCAGCGTT+TGG | + | tig0022138:66204-66223 | Msa1397250:CDS | 45.0% | |
| !! | CTTTTCCAAACGCTGCTTTG+TGG | - | tig0022138:66212-66231 | None:intergenic | 45.0% |
| GCAGCGTTTGGAAAAGAAAG+GGG | + | tig0022138:66216-66235 | Msa1397250:CDS | 45.0% | |
| CAGCGTTTGGAAAAGAAAGG+GGG | + | tig0022138:66217-66236 | Msa1397250:CDS | 45.0% | |
| TAGTTCCTGGATCAGACTCT+GGG | - | tig0022138:66530-66549 | None:intergenic | 45.0% | |
| TCTGATCCAGGAACTACTTC+AGG | + | tig0022138:66534-66553 | Msa1397250:CDS | 45.0% | |
| !! | AAAAAAAAAAAAAAAAAATC+AGG | - | tig0022138:62423-62442 | None:intergenic | 5.0% |
| TGATCTGTACGAGGTTGGCA+TGG | - | tig0022138:61096-61115 | None:intergenic | 50.0% | |
| GCTTCAACCGTACGATCTTG+AGG | - | tig0022138:61218-61237 | None:intergenic | 50.0% | |
| CACTCTCAACGTGAAGAGCA+TGG | - | tig0022138:61289-61308 | None:intergenic | 50.0% | |
| CATGCTCTTCACGTTGAGAG+TGG | + | tig0022138:61287-61306 | Msa1397250:CDS | 50.0% | |
| GTCAACAGCACCAAAGTCCA+TGG | - | tig0022138:61331-61350 | None:intergenic | 50.0% | |
| GACGTGGCGGTATCTTATAG+AGG | + | tig0022138:61348-61367 | Msa1397250:CDS | 50.0% | |
| GGCACGTGACTTCGAAGAAT+GGG | + | tig0022138:61382-61401 | Msa1397250:CDS | 50.0% | |
| TTCGAAGAATGGGCACGTGA+GGG | + | tig0022138:61392-61411 | Msa1397250:CDS | 50.0% | |
| GTTGTTGGAGGACCTTGCTA+AGG | + | tig0022138:61485-61504 | Msa1397250:CDS | 50.0% | |
| CCGTCAACACTGTCTTCATG+AGG | + | tig0022138:61766-61785 | Msa1397250:CDS | 50.0% | |
| GTACTTGGTACCCCAATGCT+TGG | + | tig0022138:62557-62576 | Msa1397250:intron | 50.0% | |
| !! | TCATCCCAATGTTGGGTTGG+TGG | + | tig0022138:62722-62741 | Msa1397250:intron | 50.0% |
| CTGAAAGAACGTACCTCCGA+TGG | - | tig0022138:64429-64448 | None:intergenic | 50.0% | |
| GACACCCACTATAGAGTCGA+TGG | + | tig0022138:64569-64588 | Msa1397250:intron | 50.0% | |
| !! | CTCGCCATCGACTCTATAGT+GGG | - | tig0022138:64576-64595 | None:intergenic | 50.0% |
| !! | TCTCGCCATCGACTCTATAG+TGG | - | tig0022138:64577-64596 | None:intergenic | 50.0% |
| CGTGAGCTCTCTCAATGCAA+TGG | + | tig0022138:64689-64708 | Msa1397250:CDS | 50.0% | |
| GAGCTCTCTCAATGCAATGG+TGG | + | tig0022138:64692-64711 | Msa1397250:CDS | 50.0% | |
| ATAAGCCCACTGCACTAGCA+AGG | - | tig0022138:65944-65963 | None:intergenic | 50.0% | |
| ! | TGGAAAAGAAAGGGGGCACA+AGG | + | tig0022138:66224-66243 | Msa1397250:CDS | 50.0% |
| ! | GGAAAAGAAAGGGGGCACAA+GGG | + | tig0022138:66225-66244 | Msa1397250:CDS | 50.0% |
| ! | GATAGGTGGTGATGCTCTCA+AGG | - | tig0022138:66457-66476 | None:intergenic | 50.0% |
| ! | GGTGGTCTTGAAGATGGTGT+TGG | - | tig0022138:66489-66508 | None:intergenic | 50.0% |
| ! | ATCGGAGGTGGTCTTGAAGA+TGG | - | tig0022138:66495-66514 | None:intergenic | 50.0% |
| TCTTCAAGACCACCTCCGAT+CGG | + | tig0022138:66495-66514 | Msa1397250:CDS | 50.0% | |
| GTAGTTCCTGGATCAGACTC+TGG | - | tig0022138:66531-66550 | None:intergenic | 50.0% | |
| TACGAGGTTGGCATGGCCAT+AGG | - | tig0022138:61089-61108 | None:intergenic | 55.0% | |
| !! | GGACTTTGGTGCTGTTGACG+TGG | + | tig0022138:61332-61351 | Msa1397250:CDS | 55.0% |
| !! | CTTTGGTGCTGTTGACGTGG+CGG | + | tig0022138:61335-61354 | Msa1397250:CDS | 55.0% |
| TTCGAAGTCACGTGCCCAAG+TGG | - | tig0022138:61378-61397 | None:intergenic | 55.0% | |
| GGGCACGTGACTTCGAAGAA+TGG | + | tig0022138:61381-61400 | Msa1397250:CDS | 55.0% | |
| CTTCGAAGAATGGGCACGTG+AGG | + | tig0022138:61391-61410 | Msa1397250:CDS | 55.0% | |
| AATGGGCACGTGAGGGCTAT+GGG | + | tig0022138:61399-61418 | Msa1397250:CDS | 55.0% | |
| ! | TCTCGATCTAGGGTGCGACA+CGG | + | tig0022138:64482-64501 | Msa1397250:intron | 55.0% |
| ! | AGGGGGCACAAGGGACAAAA+TGG | + | tig0022138:66234-66253 | Msa1397250:CDS | 55.0% |
| ! | GGGGGCACAAGGGACAAAAT+GGG | + | tig0022138:66235-66254 | Msa1397250:CDS | 55.0% |
| ! | TCCTGGATCAGACTCTGGGA+CGG | - | tig0022138:66526-66545 | None:intergenic | 55.0% |
| CGCGTTCCTGAAGTAGTTCC+TGG | - | tig0022138:66543-66562 | None:intergenic | 55.0% | |
| GAATGGGCACGTGAGGGCTA+TGG | + | tig0022138:61398-61417 | Msa1397250:CDS | 60.0% | |
| GGGGCCACCAACCCAACATT+GGG | - | tig0022138:62729-62748 | None:intergenic | 60.0% | |
| AGGGGCCACCAACCCAACAT+TGG | - | tig0022138:62730-62749 | None:intergenic | 60.0% | |
| ! | ATCTAGGGTGCGACACGGTG+TGG | + | tig0022138:64487-64506 | Msa1397250:intron | 60.0% |
| !! | CTGGATCAGACTCTGGGACG+GGG | - | tig0022138:66524-66543 | None:intergenic | 60.0% |
| !! | CCTGGATCAGACTCTGGGAC+GGG | - | tig0022138:66525-66544 | None:intergenic | 60.0% |
| ! | TCTGGGACGGGGACTCCGAT+CGG | - | tig0022138:66513-66532 | None:intergenic | 65.0% |
| CCCGTCCCAGAGTCTGATCC+AGG | + | tig0022138:66522-66541 | Msa1397250:CDS | 65.0% | |
| ACGGGGACTCCGATCGGAGG+TGG | - | tig0022138:66507-66526 | None:intergenic | 70.0% | |
| GGGACGGGGACTCCGATCGG+AGG | - | tig0022138:66510-66529 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0022138 | gene | 60887 | 66610 | 60887 | ID=Msa1397250;Name=Msa1397250 |
| tig0022138 | mRNA | 60887 | 66610 | 60887 | ID=Msa1397250-mRNA-1;Parent=Msa1397250;Name=Msa1397250-mRNA-1;_AED=0.08;_eAED=0.08;_QI=158|1|0.8|1|1|1|5|32|349 |
| tig0022138 | exon | 60887 | 61581 | 60887 | ID=Msa1397250-mRNA-1:exon:15912;Parent=Msa1397250-mRNA-1 |
| tig0022138 | exon | 61716 | 61787 | 61716 | ID=Msa1397250-mRNA-1:exon:15913;Parent=Msa1397250-mRNA-1 |
| tig0022138 | exon | 64632 | 64713 | 64632 | ID=Msa1397250-mRNA-1:exon:15914;Parent=Msa1397250-mRNA-1 |
| tig0022138 | exon | 66122 | 66341 | 66122 | ID=Msa1397250-mRNA-1:exon:15915;Parent=Msa1397250-mRNA-1 |
| tig0022138 | exon | 66440 | 66610 | 66440 | ID=Msa1397250-mRNA-1:exon:15916;Parent=Msa1397250-mRNA-1 |
| tig0022138 | five_prime_UTR | 60887 | 61044 | 60887 | ID=Msa1397250-mRNA-1:five_prime_utr;Parent=Msa1397250-mRNA-1 |
| tig0022138 | CDS | 61045 | 61581 | 61045 | ID=Msa1397250-mRNA-1:cds;Parent=Msa1397250-mRNA-1 |
| tig0022138 | CDS | 61716 | 61787 | 61716 | ID=Msa1397250-mRNA-1:cds;Parent=Msa1397250-mRNA-1 |
| tig0022138 | CDS | 64632 | 64713 | 64632 | ID=Msa1397250-mRNA-1:cds;Parent=Msa1397250-mRNA-1 |
| tig0022138 | CDS | 66122 | 66341 | 66122 | ID=Msa1397250-mRNA-1:cds;Parent=Msa1397250-mRNA-1 |
| tig0022138 | CDS | 66440 | 66578 | 66440 | ID=Msa1397250-mRNA-1:cds;Parent=Msa1397250-mRNA-1 |
| tig0022138 | three_prime_UTR | 66579 | 66610 | 66579 | ID=Msa1397250-mRNA-1:three_prime_utr;Parent=Msa1397250-mRNA-1 |
| Gene Sequence |
| Protein sequence |
