Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141100 | KEH35377.1 | 70.588 | 153 | 29 | 4 | 1 | 150 | 1 | 140 | 9.40e-62 | 196 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0141100 | A0A072V0S2 | 70.588 | 153 | 29 | 4 | 1 | 150 | 1 | 140 | 4.49e-62 | 196 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004880 | Msa0141100 | 0.811664 | 6.252479e-51 | -8.615850e-47 |
| Msa0017510 | Msa0141100 | 0.823124 | 1.639579e-53 | -8.615850e-47 |
| Msa0036430 | Msa0141100 | 0.826976 | 2.018689e-54 | -8.615850e-47 |
| Msa0036960 | Msa0141100 | 0.844522 | 7.178458e-59 | -8.615850e-47 |
| Msa0044020 | Msa0141100 | 0.800667 | 1.294084e-48 | -8.615850e-47 |
| Msa0044100 | Msa0141100 | 0.848536 | 5.756669e-60 | -8.615850e-47 |
| Msa0072370 | Msa0141100 | 0.827706 | 1.349387e-54 | -8.615850e-47 |
| Msa0078430 | Msa0141100 | 0.815139 | 1.077544e-51 | -8.615850e-47 |
| Msa0084500 | Msa0141100 | 0.800916 | 1.151135e-48 | -8.615850e-47 |
| Msa0095540 | Msa0141100 | 0.843464 | 1.379189e-58 | -8.615850e-47 |
| Msa0101810 | Msa0141100 | -0.805281 | 1.439805e-49 | -8.615850e-47 |
| Msa0105420 | Msa0141100 | 0.823277 | 1.510053e-53 | -8.615850e-47 |
| Msa0110970 | Msa0141100 | 0.807976 | 3.884301e-50 | -8.615850e-47 |
| Msa0112750 | Msa0141100 | 0.804550 | 2.047136e-49 | -8.615850e-47 |
| Msa0124340 | Msa0141100 | 0.800596 | 1.338502e-48 | -8.615850e-47 |
| Msa0130570 | Msa0141100 | 0.829585 | 4.739708e-55 | -8.615850e-47 |
| Msa0141100 | Msa0148340 | 0.809636 | 1.715973e-50 | -8.615850e-47 |
| Msa0141100 | Msa0153420 | 0.802570 | 5.269304e-49 | -8.615850e-47 |
| Msa0141100 | Msa0156650 | -0.810248 | 1.266832e-50 | -8.615850e-47 |
| Msa0141100 | Msa0157290 | 0.822662 | 2.101095e-53 | -8.615850e-47 |
| Msa0141100 | Msa0163980 | 0.804666 | 1.935764e-49 | -8.615850e-47 |
| Msa0141100 | Msa0173990 | 0.822375 | 2.449384e-53 | -8.615850e-47 |
| Msa0141100 | Msa0176470 | 0.803622 | 3.192398e-49 | -8.615850e-47 |
| Msa0141100 | Msa0183750 | 0.866212 | 3.361852e-65 | -8.615850e-47 |
| Msa0141100 | Msa0185380 | 0.824163 | 9.369102e-54 | -8.615850e-47 |
| Msa0141100 | Msa0191040 | 0.854857 | 9.306786e-62 | -8.615850e-47 |
| Msa0141100 | Msa0191250 | 0.801399 | 9.170917e-49 | -8.615850e-47 |
| Msa0141100 | Msa0197930 | 0.804735 | 1.872755e-49 | -8.615850e-47 |
| Msa0141100 | Msa0220300 | 0.869926 | 2.146444e-66 | -8.615850e-47 |
| Msa0141100 | Msa0223740 | 0.803268 | 3.779564e-49 | -8.615850e-47 |
| Msa0141100 | Msa0225600 | 0.859195 | 4.892453e-63 | -8.615850e-47 |
| Msa0141100 | Msa0233340 | 0.854811 | 9.597899e-62 | -8.615850e-47 |
| Msa0141100 | Msa0236440 | 0.834991 | 2.175726e-56 | -8.615850e-47 |
| Msa0141100 | Msa0243100 | 0.813188 | 2.903964e-51 | -8.615850e-47 |
| Msa0141100 | Msa0251240 | 0.834166 | 3.507546e-56 | -8.615850e-47 |
| Msa0141100 | Msa0259370 | 0.807318 | 5.360333e-50 | -8.615850e-47 |
| Msa0141100 | Msa0266450 | 0.859677 | 3.504465e-63 | -8.615850e-47 |
| Msa0141100 | Msa0271040 | 0.805556 | 1.260813e-49 | -8.615850e-47 |
| Msa0141100 | Msa0282210 | 0.802034 | 6.792384e-49 | -8.615850e-47 |
| Msa0141100 | Msa0282250 | 0.809213 | 2.114379e-50 | -8.615850e-47 |
| Msa0141100 | Msa0287650 | 0.813775 | 2.158110e-51 | -8.615850e-47 |
| Msa0141100 | Msa0288190 | 0.810579 | 1.074378e-50 | -8.615850e-47 |
| Msa0141100 | Msa0309350 | 0.811983 | 5.328939e-51 | -8.615850e-47 |
| Msa0141100 | Msa0311690 | 0.846070 | 2.735036e-59 | -8.615850e-47 |
| Msa0141100 | Msa0315250 | 0.837413 | 5.276127e-57 | -8.615850e-47 |
| Msa0141100 | Msa0316850 | 0.811039 | 8.543798e-51 | -8.615850e-47 |
| Msa0141100 | Msa0326540 | 0.816589 | 5.116365e-52 | -8.615850e-47 |
| Msa0141100 | Msa0334500 | 0.810175 | 1.313532e-50 | -8.615850e-47 |
| Msa0141100 | Msa0362780 | 0.801125 | 1.043322e-48 | -8.615850e-47 |
| Msa0141100 | Msa0366240 | 0.801616 | 8.277187e-49 | -8.615850e-47 |
| Msa0141100 | Msa0374850 | 0.993157 | 7.909697e-198 | -8.615850e-47 |
| Msa0141100 | Msa0375090 | 0.972029 | 4.188949e-134 | -8.615850e-47 |
| Msa0141100 | Msa0385670 | 0.827465 | 1.541468e-54 | -8.615850e-47 |
| Msa0141100 | Msa0414950 | -0.802041 | 6.772089e-49 | -8.615850e-47 |
| Msa0141100 | Msa0419820 | 0.831263 | 1.843081e-55 | -8.615850e-47 |
| Msa0141100 | Msa0423360 | -0.823116 | 1.647327e-53 | -8.615850e-47 |
| Msa0141100 | Msa0435670 | 0.813804 | 2.126034e-51 | -8.615850e-47 |
| Msa0141100 | Msa0436280 | -0.810300 | 1.234392e-50 | -8.615850e-47 |
| Msa0141100 | Msa0458010 | 0.821942 | 3.087074e-53 | -8.615850e-47 |
| Msa0141100 | Msa0470340 | 0.955114 | 6.384359e-113 | -8.615850e-47 |
| Msa0141100 | Msa0470860 | 0.875699 | 2.507882e-68 | -8.615850e-47 |
| Msa0141100 | Msa0479680 | 0.807152 | 5.811583e-50 | -8.615850e-47 |
| Msa0141100 | Msa0480950 | 0.876977 | 9.084424e-69 | -8.615850e-47 |
| Msa0141100 | Msa0481110 | 0.847053 | 1.474867e-59 | -8.615850e-47 |
| Msa0141100 | Msa0484780 | 0.814823 | 1.266223e-51 | -8.615850e-47 |
| Msa0141100 | Msa0503580 | 0.825908 | 3.626524e-54 | -8.615850e-47 |
| Msa0141100 | Msa0520510 | 0.808488 | 3.021837e-50 | -8.615850e-47 |
| Msa0141100 | Msa0531430 | 0.904690 | 9.433196e-80 | -8.615850e-47 |
| Msa0141100 | Msa0532710 | 0.810471 | 1.134060e-50 | -8.615850e-47 |
| Msa0141100 | Msa0534570 | 0.852309 | 5.023648e-61 | -8.615850e-47 |
| Msa0141100 | Msa0534590 | 0.890037 | 1.414123e-73 | -8.615850e-47 |
| Msa0141100 | Msa0548620 | 0.841220 | 5.421759e-58 | -8.615850e-47 |
| Msa0141100 | Msa0548660 | 0.803145 | 4.008939e-49 | -8.615850e-47 |
| Msa0141100 | Msa0558840 | 0.803912 | 2.779965e-49 | -8.615850e-47 |
| Msa0141100 | Msa0565600 | 0.846426 | 2.187979e-59 | -8.615850e-47 |
| Msa0141100 | Msa0574460 | 0.806858 | 6.707075e-50 | -8.615850e-47 |
| Msa0141100 | Msa0590800 | 0.883588 | 3.952543e-71 | -8.615850e-47 |
| Msa0141100 | Msa0609430 | 0.835156 | 1.976766e-56 | -8.615850e-47 |
| Msa0141100 | Msa0611380 | 0.870010 | 2.014616e-66 | -8.615850e-47 |
| Msa0141100 | Msa0618180 | 0.857263 | 1.839062e-62 | -8.615850e-47 |
| Msa0141100 | Msa0618220 | 0.842775 | 2.104313e-58 | -8.615850e-47 |
| Msa0141100 | Msa0618290 | 0.800337 | 1.511310e-48 | -8.615850e-47 |
| Msa0141100 | Msa0619990 | 0.849164 | 3.853514e-60 | -8.615850e-47 |
| Msa0141100 | Msa0628640 | 0.883369 | 4.756931e-71 | -8.615850e-47 |
| Msa0141100 | Msa0631120 | 0.908725 | 1.249063e-81 | -8.615850e-47 |
| Msa0141100 | Msa0633840 | 0.811936 | 5.456231e-51 | -8.615850e-47 |
| Msa0141100 | Msa0638070 | 0.808382 | 3.183566e-50 | -8.615850e-47 |
| Msa0141100 | Msa0647980 | 0.800942 | 1.137426e-48 | -8.615850e-47 |
| Msa0141100 | Msa0650070 | 0.837746 | 4.332149e-57 | -8.615850e-47 |
| Msa0141100 | Msa0657970 | 0.801650 | 8.146259e-49 | -8.615850e-47 |
| Msa0141100 | Msa0666030 | 0.873102 | 1.907126e-67 | -8.615850e-47 |
| Msa0141100 | Msa0669340 | 0.890382 | 1.036342e-73 | -8.615850e-47 |
| Msa0141100 | Msa0684500 | 0.865276 | 6.640556e-65 | -8.615850e-47 |
| Msa0141100 | Msa0692060 | 0.841427 | 4.782104e-58 | -8.615850e-47 |
| Msa0141100 | Msa0701970 | 0.864882 | 8.828701e-65 | -8.615850e-47 |
| Msa0141100 | Msa0706420 | 0.829893 | 3.989937e-55 | -8.615850e-47 |
| Msa0141100 | Msa0708520 | 0.804404 | 2.195965e-49 | -8.615850e-47 |
| Msa0141100 | Msa0709500 | 0.818704 | 1.705757e-52 | -8.615850e-47 |
| Msa0141100 | Msa0716450 | 0.904816 | 8.258489e-80 | -8.615850e-47 |
| Msa0141100 | Msa0717260 | 0.887712 | 1.121253e-72 | -8.615850e-47 |
| Msa0141100 | Msa0734230 | 0.824031 | 1.005773e-53 | -8.615850e-47 |
| Msa0141100 | Msa0741900 | 0.818462 | 1.936059e-52 | -8.615850e-47 |
| Msa0141100 | Msa0750880 | 0.811987 | 5.318299e-51 | -8.615850e-47 |
| Msa0141100 | Msa0754720 | -0.813357 | 2.667044e-51 | -8.615850e-47 |
| Msa0141100 | Msa0756630 | -0.827233 | 1.751491e-54 | -8.615850e-47 |
| Msa0141100 | Msa0758320 | 0.892429 | 1.600719e-74 | -8.615850e-47 |
| Msa0141100 | Msa0775440 | 0.876614 | 1.213728e-68 | -8.615850e-47 |
| Msa0141100 | Msa0780740 | 0.815707 | 8.052320e-52 | -8.615850e-47 |
| Msa0141100 | Msa0787260 | 0.822163 | 2.743121e-53 | -8.615850e-47 |
| Msa0141100 | Msa0790850 | 0.816298 | 5.945047e-52 | -8.615850e-47 |
| Msa0141100 | Msa0799030 | 0.884665 | 1.578961e-71 | -8.615850e-47 |
| Msa0141100 | Msa0799700 | 0.859029 | 5.487453e-63 | -8.615850e-47 |
| Msa0141100 | Msa0810020 | 0.815194 | 1.047319e-51 | -8.615850e-47 |
| Msa0141100 | Msa0812820 | 0.858895 | 6.016275e-63 | -8.615850e-47 |
| Msa0141100 | Msa0819680 | 0.807068 | 6.053876e-50 | -8.615850e-47 |
| Msa0141100 | Msa0822990 | 0.813638 | 2.312652e-51 | -8.615850e-47 |
| Msa0141100 | Msa0829620 | 0.800176 | 1.629608e-48 | -8.615850e-47 |
| Msa0141100 | Msa0837440 | 0.881431 | 2.415169e-70 | -8.615850e-47 |
| Msa0141100 | Msa0837980 | 0.899439 | 1.980309e-77 | -8.615850e-47 |
| Msa0141100 | Msa0853320 | 0.878736 | 2.205543e-69 | -8.615850e-47 |
| Msa0141100 | Msa0862100 | 0.801495 | 8.766118e-49 | -8.615850e-47 |
| Msa0141100 | Msa0867890 | 0.806519 | 7.907943e-50 | -8.615850e-47 |
| Msa0141100 | Msa0870620 | 0.808298 | 3.317881e-50 | -8.615850e-47 |
| Msa0141100 | Msa0880140 | 0.824692 | 7.032028e-54 | -8.615850e-47 |
| Msa0141100 | Msa0880710 | 0.839583 | 1.452981e-57 | -8.615850e-47 |
| Msa0141100 | Msa0894890 | 0.803296 | 3.729713e-49 | -8.615850e-47 |
| Msa0141100 | Msa0902760 | 0.805203 | 1.494842e-49 | -8.615850e-47 |
| Msa0141100 | Msa0933310 | 0.801933 | 7.126425e-49 | -8.615850e-47 |
| Msa0141100 | Msa0936270 | 0.806235 | 9.076950e-50 | -8.615850e-47 |
| Msa0141100 | Msa0944770 | 0.812666 | 3.779108e-51 | -8.615850e-47 |
| Msa0141100 | Msa0966340 | 0.823656 | 1.231934e-53 | -8.615850e-47 |
| Msa0141100 | Msa0966420 | 0.825834 | 3.775404e-54 | -8.615850e-47 |
| Msa0141100 | Msa0966440 | 0.822771 | 1.981473e-53 | -8.615850e-47 |
| Msa0141100 | Msa0970030 | 0.803568 | 3.276448e-49 | -8.615850e-47 |
| Msa0141100 | Msa0981010 | 0.840958 | 6.355812e-58 | -8.615850e-47 |
| Msa0141100 | Msa1001770 | 0.828152 | 1.053642e-54 | -8.615850e-47 |
| Msa0141100 | Msa1002620 | 0.880476 | 5.318517e-70 | -8.615850e-47 |
| Msa0141100 | Msa1007610 | -0.821156 | 4.690214e-53 | -8.615850e-47 |
| Msa0141100 | Msa1010110 | 0.836862 | 7.298376e-57 | -8.615850e-47 |
| Msa0141100 | Msa1013400 | 0.814313 | 1.641813e-51 | -8.615850e-47 |
| Msa0141100 | Msa1033560 | 0.838225 | 3.263241e-57 | -8.615850e-47 |
| Msa0141100 | Msa1037700 | -0.800196 | 1.614228e-48 | -8.615850e-47 |
| Msa0141100 | Msa1040400 | 0.824269 | 8.845806e-54 | -8.615850e-47 |
| Msa0141100 | Msa1073340 | 0.814500 | 1.492374e-51 | -8.615850e-47 |
| Msa0141100 | Msa1083150 | 0.816738 | 4.735961e-52 | -8.615850e-47 |
| Msa0141100 | Msa1085300 | 0.807038 | 6.143634e-50 | -8.615850e-47 |
| Msa0141100 | Msa1093530 | 0.804768 | 1.843756e-49 | -8.615850e-47 |
| Msa0141100 | Msa1098560 | 0.806959 | 6.383595e-50 | -8.615850e-47 |
| Msa0141100 | Msa1113850 | 0.854611 | 1.096924e-61 | -8.615850e-47 |
| Msa0141100 | Msa1125760 | 0.821203 | 4.575505e-53 | -8.615850e-47 |
| Msa0141100 | Msa1127890 | 0.805008 | 1.642463e-49 | -8.615850e-47 |
| Msa0141100 | Msa1140690 | 0.809630 | 1.720852e-50 | -8.615850e-47 |
| Msa0141100 | Msa1145250 | -0.812292 | 4.561959e-51 | -8.615850e-47 |
| Msa0141100 | Msa1151910 | 0.802131 | 6.489810e-49 | -8.615850e-47 |
| Msa0141100 | Msa1160400 | 0.824986 | 5.995001e-54 | -8.615850e-47 |
| Msa0141100 | Msa1171360 | 0.816920 | 4.311170e-52 | -8.615850e-47 |
| Msa0141100 | Msa1172450 | 0.808071 | 3.708173e-50 | -8.615850e-47 |
| Msa0141100 | Msa1172670 | 0.817611 | 3.014914e-52 | -8.615850e-47 |
| Msa0141100 | Msa1179460 | 0.835335 | 1.781539e-56 | -8.615850e-47 |
| Msa0141100 | Msa1187840 | 0.806926 | 6.486921e-50 | -8.615850e-47 |
| Msa0141100 | Msa1190120 | 0.858357 | 8.706266e-63 | -8.615850e-47 |
| Msa0141100 | Msa1197590 | 0.847930 | 8.464938e-60 | -8.615850e-47 |
| Msa0141100 | Msa1201890 | 0.826198 | 3.093745e-54 | -8.615850e-47 |
| Msa0141100 | Msa1203000 | 0.897557 | 1.252445e-76 | -8.615850e-47 |
| Msa0141100 | Msa1205960 | 0.829694 | 4.460625e-55 | -8.615850e-47 |
| Msa0141100 | Msa1207270 | 0.809916 | 1.493644e-50 | -8.615850e-47 |
| Msa0141100 | Msa1211550 | 0.852448 | 4.587470e-61 | -8.615850e-47 |
| Msa0141100 | Msa1214880 | 0.806405 | 8.357983e-50 | -8.615850e-47 |
| Msa0141100 | Msa1214890 | 0.804917 | 1.716052e-49 | -8.615850e-47 |
| Msa0141100 | Msa1217860 | 0.818913 | 1.529146e-52 | -8.615850e-47 |
| Msa0141100 | Msa1217940 | 0.867541 | 1.268121e-65 | -8.615850e-47 |
| Msa0141100 | Msa1218480 | 0.838329 | 3.067251e-57 | -8.615850e-47 |
| Msa0141100 | Msa1218600 | 0.814116 | 1.815058e-51 | -8.615850e-47 |
| Msa0141100 | Msa1219260 | 0.903453 | 3.415328e-79 | -8.615850e-47 |
| Msa0141100 | Msa1227950 | 0.840673 | 7.549052e-58 | -8.615850e-47 |
| Msa0141100 | Msa1227970 | 0.846557 | 2.015465e-59 | -8.615850e-47 |
| Msa0141100 | Msa1254700 | 0.863347 | 2.656969e-64 | -8.615850e-47 |
| Msa0141100 | Msa1255040 | -0.815497 | 8.969627e-52 | -8.615850e-47 |
| Msa0141100 | Msa1255280 | 0.904683 | 9.502906e-80 | -8.615850e-47 |
| Msa0141100 | Msa1258050 | 0.855384 | 6.542872e-62 | -8.615850e-47 |
| Msa0141100 | Msa1260040 | 0.819124 | 1.369565e-52 | -8.615850e-47 |
| Msa0141100 | Msa1264020 | 0.803186 | 3.930701e-49 | -8.615850e-47 |
| Msa0141100 | Msa1266960 | 0.902307 | 1.108727e-78 | -8.615850e-47 |
| Msa0141100 | Msa1269580 | -0.811765 | 5.942981e-51 | -8.615850e-47 |
| Msa0141100 | Msa1283170 | 0.800027 | 1.747020e-48 | -8.615850e-47 |
| Msa0141100 | Msa1291870 | 0.852238 | 5.262107e-61 | -8.615850e-47 |
| Msa0141100 | Msa1294900 | 0.800632 | 1.316071e-48 | -8.615850e-47 |
| Msa0141100 | Msa1300870 | 0.812860 | 3.428484e-51 | -8.615850e-47 |
| Msa0141100 | Msa1303250 | 0.806972 | 6.345131e-50 | -8.615850e-47 |
| Msa0141100 | Msa1308130 | 0.803205 | 3.895477e-49 | -8.615850e-47 |
| Msa0141100 | Msa1308380 | 0.803287 | 3.747040e-49 | -8.615850e-47 |
| Msa0141100 | Msa1322190 | 0.806702 | 7.236434e-50 | -8.615850e-47 |
| Msa0141100 | Msa1329920 | 0.846094 | 2.695683e-59 | -8.615850e-47 |
| Msa0141100 | Msa1331910 | 0.820035 | 8.486220e-53 | -8.615850e-47 |
| Msa0141100 | Msa1331920 | 0.814426 | 1.550199e-51 | -8.615850e-47 |
| Msa0141100 | Msa1339940 | 0.849535 | 3.037864e-60 | -8.615850e-47 |
| Msa0141100 | Msa1340650 | 0.803878 | 2.824789e-49 | -8.615850e-47 |
| Msa0141100 | Msa1342430 | 0.826372 | 2.812100e-54 | -8.615850e-47 |
| Msa0141100 | Msa1343820 | 0.806475 | 8.078420e-50 | -8.615850e-47 |
| Msa0141100 | Msa1353060 | 0.819091 | 1.393175e-52 | -8.615850e-47 |
| Msa0141100 | Msa1369700 | 0.851323 | 9.564259e-61 | -8.615850e-47 |
| Msa0141100 | Msa1370090 | 0.817340 | 3.469408e-52 | -8.615850e-47 |
| Msa0141100 | Msa1381140 | 0.825621 | 4.242246e-54 | -8.615850e-47 |
| Msa0141100 | Msa1385670 | 0.819724 | 9.994861e-53 | -8.615850e-47 |
| Msa0141100 | Msa1395870 | 0.890830 | 6.909288e-74 | -8.615850e-47 |
| Msa0141100 | Msa1397250 | 0.868026 | 8.865612e-66 | -8.615850e-47 |
| Msa0141100 | Msa1397340 | 0.806779 | 6.969647e-50 | -8.615850e-47 |
| Msa0141100 | Msa1399560 | 0.899798 | 1.386554e-77 | -8.615850e-47 |
| Msa0141100 | Msa1401150 | 0.859025 | 5.500014e-63 | -8.615850e-47 |
| Msa0141100 | Msa1405180 | 0.817251 | 3.632290e-52 | -8.615850e-47 |
| Msa0141100 | Msa1423450 | 0.808169 | 3.534611e-50 | -8.615850e-47 |
| Msa0141100 | Msa1429360 | -0.810913 | 9.099016e-51 | -8.615850e-47 |
| Msa0141100 | Msa1437190 | 0.858806 | 6.396546e-63 | -8.615850e-47 |
| Msa0141100 | Msa1439960 | 0.814126 | 1.805326e-51 | -8.615850e-47 |
| Msa0141100 | Msa1440340 | 0.838275 | 3.167266e-57 | -8.615850e-47 |
| Msa0141100 | Msa1443840 | 0.883283 | 5.117267e-71 | -8.615850e-47 |
| Msa0141100 | Msa1449730 | 0.852229 | 5.293482e-61 | -8.615850e-47 |
| Msa0141100 | Msa1452060 | 0.849252 | 3.643196e-60 | -8.615850e-47 |
| Msa0141100 | Msa1460380 | 0.865529 | 5.528634e-65 | -8.615850e-47 |
| Msa0141100 | Msa1460890 | 0.821787 | 3.352665e-53 | -8.615850e-47 |
| Msa0141100 | Msa1461280 | 0.801673 | 8.059016e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 36 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCAGTGAATACAGCATTC+TGG | 0.307625 | 1_3:+75857430 | None:intergenic |
| AGCTCATTCCCTCCGGTTAG+AGG | 0.341992 | 1_3:+75855746 | None:intergenic |
| TTGGTGCGCCATTTCCATTC+CGG | 0.361769 | 1_3:-75855687 | Msa0141100:CDS |
| TGCTGTACTGTCGAAGTTCA+TGG | 0.381882 | 1_3:-75856269 | Msa0141100:CDS |
| AGAATGTTCATGTCCATGTT+TGG | 0.385757 | 1_3:+75855782 | None:intergenic |
| CTCTTGATGCTTCCTCTAAC+CGG | 0.394494 | 1_3:-75855758 | Msa0141100:CDS |
| TGTCTGCTGCAGACTTAGAT+TGG | 0.399453 | 1_3:-75855706 | Msa0141100:CDS |
| TGAACAGGATGGGGTGGCCG+AGG | 0.409297 | 1_3:-75855820 | Msa0141100:intron |
| TTCAGTGAATACAGCATTCT+GGG | 0.409303 | 1_3:+75857431 | None:intergenic |
| CGTTTGATCTCGATTGATCA+TGG | 0.411796 | 1_3:+75855655 | None:intergenic |
| CCAGTTGCAACCACGATTGT+TGG | 0.419959 | 1_3:-75857490 | Msa0141100:CDS |
| ATTATAGGTGGCTCCGTCCC+TGG | 0.426772 | 1_3:-75856336 | Msa0141100:intron |
| AAAGAAAACCGGAATGGAAA+TGG | 0.435071 | 1_3:+75855679 | None:intergenic |
| CCAACAATCGTGGTTGCAAC+TGG | 0.460178 | 1_3:+75857490 | None:intergenic |
| TTGATCATGGAAAAGAAAAC+CGG | 0.489124 | 1_3:+75855668 | None:intergenic |
| CTTCGTTGTGCAAGTGATTG+TGG | 0.509528 | 1_3:+75856308 | None:intergenic |
| GAACAGGATGGGGTGGCCGA+GGG | 0.510010 | 1_3:-75855819 | Msa0141100:intron |
| AATCACTTGCACAACGAAGC+AGG | 0.517094 | 1_3:-75856304 | Msa0141100:CDS |
| TACTGATAAAAGCATAATCC+TGG | 0.519988 | 1_3:+75857466 | None:intergenic |
| AAAATTTAGCTCATTCCCTC+CGG | 0.520005 | 1_3:+75855739 | None:intergenic |
| TGAATACAGCATTCTGGGCG+AGG | 0.532999 | 1_3:+75857436 | None:intergenic |
| AGTTCATGGTTCCACATAAG+TGG | 0.551033 | 1_3:-75856255 | Msa0141100:intron |
| CAAGTGATTGTGGTGCAACC+AGG | 0.558677 | 1_3:+75856318 | None:intergenic |
| ATCACTTGCACAACGAAGCA+GGG | 0.575010 | 1_3:-75856303 | Msa0141100:CDS |
| CATGGAAAAGAAAACCGGAA+TGG | 0.575984 | 1_3:+75855673 | None:intergenic |
| GCAACCACGATTGTTGGACC+AGG | 0.579692 | 1_3:-75857484 | Msa0141100:CDS |
| TTCAACTTCGTGTTGTCTAG+AGG | 0.579794 | 1_3:+75857389 | None:intergenic |
| AACTTCTGAACAGGATGGGG+TGG | 0.581840 | 1_3:-75855826 | Msa0141100:intron |
| GATTGTGGTGCAACCAGGGA+CGG | 0.591641 | 1_3:+75856323 | None:intergenic |
| CGGTTAGAGGAAGCATCAAG+AGG | 0.632608 | 1_3:+75855759 | None:intergenic |
| TTGATGCTTCCTCTAACCGG+AGG | 0.635948 | 1_3:-75855755 | Msa0141100:CDS |
| TGATGCTTCCTCTAACCGGA+GGG | 0.648380 | 1_3:-75855754 | Msa0141100:CDS |
| TGATCAATCGAGATCAAACG+AGG | 0.656317 | 1_3:-75855652 | Msa0141100:CDS |
| TAATCCTGGTCCAACAATCG+TGG | 0.660315 | 1_3:+75857480 | None:intergenic |
| AAGTGATTGTGGTGCAACCA+GGG | 0.678211 | 1_3:+75856319 | None:intergenic |
| GATCAATCGAGATCAAACGA+GGG | 0.743681 | 1_3:-75855651 | Msa0141100:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAGTAAATTTTAATTTAATT+TGG | + | chr1_3:75856903-75856922 | None:intergenic | 10.0% |
| !!! | CAGTAAATTTTAATTTAATT+TGG | + | chr1_3:75856903-75856922 | None:intergenic | 10.0% |
| !! | AATTTAACATTTGATTGATA+TGG | + | chr1_3:75856254-75856273 | None:intergenic | 15.0% |
| !!! | TAATTTGTTTTATCCATAAA+AGG | - | chr1_3:75856531-75856550 | Msa0141100:intron | 15.0% |
| !! | AACATCATTATATTATCTAT+TGG | - | chr1_3:75856648-75856667 | Msa0141100:intron | 15.0% |
| !! | TCATTATTAATTCATAAATC+AGG | - | chr1_3:75857262-75857281 | Msa0141100:intron | 15.0% |
| !! | AATTTAACATTTGATTGATA+TGG | + | chr1_3:75856254-75856273 | None:intergenic | 15.0% |
| !!! | TAATTTGTTTTATCCATAAA+AGG | - | chr1_3:75856531-75856550 | Msa0141100:intron | 15.0% |
| !! | AACATCATTATATTATCTAT+TGG | - | chr1_3:75856648-75856667 | Msa0141100:intron | 15.0% |
| !! | TCATTATTAATTCATAAATC+AGG | - | chr1_3:75857262-75857281 | Msa0141100:intron | 15.0% |
| !!! | ACATTTTACTTATGAAATCA+TGG | + | chr1_3:75856081-75856100 | None:intergenic | 20.0% |
| !! | TTTCATAAGTAAAATGTCTT+TGG | - | chr1_3:75856084-75856103 | Msa0141100:intron | 20.0% |
| !!! | TTTTTTTTGCTTGTATTTGA+CGG | + | chr1_3:75856130-75856149 | None:intergenic | 20.0% |
| !! | TTAGCTTAACGTTAAATTAT+AGG | + | chr1_3:75856401-75856420 | None:intergenic | 20.0% |
| !! | AAGAACTAATAACTATAGTT+TGG | - | chr1_3:75856419-75856438 | Msa0141100:intron | 20.0% |
| !!! | GGAGAATTTTATTGTTTAAT+TGG | - | chr1_3:75856598-75856617 | Msa0141100:intron | 20.0% |
| !! | TTTATTGTTTAATTGGAATG+TGG | - | chr1_3:75856605-75856624 | Msa0141100:intron | 20.0% |
| !!! | TAGAAGTACATTTTGATTAT+AGG | - | chr1_3:75856769-75856788 | Msa0141100:intron | 20.0% |
| !! | AATATAAGATACAATATGAG+TGG | - | chr1_3:75856948-75856967 | Msa0141100:intron | 20.0% |
| !! | TTATTAATTCATAAATCAGG+AGG | - | chr1_3:75857265-75857284 | Msa0141100:intron | 20.0% |
| !!! | ACATTTTACTTATGAAATCA+TGG | + | chr1_3:75856081-75856100 | None:intergenic | 20.0% |
| !! | TTTCATAAGTAAAATGTCTT+TGG | - | chr1_3:75856084-75856103 | Msa0141100:intron | 20.0% |
| !!! | TTTTTTTTGCTTGTATTTGA+CGG | + | chr1_3:75856130-75856149 | None:intergenic | 20.0% |
| !! | TTAGCTTAACGTTAAATTAT+AGG | + | chr1_3:75856401-75856420 | None:intergenic | 20.0% |
| !! | AAGAACTAATAACTATAGTT+TGG | - | chr1_3:75856419-75856438 | Msa0141100:intron | 20.0% |
| !!! | GGAGAATTTTATTGTTTAAT+TGG | - | chr1_3:75856598-75856617 | Msa0141100:intron | 20.0% |
| !! | TTTATTGTTTAATTGGAATG+TGG | - | chr1_3:75856605-75856624 | Msa0141100:intron | 20.0% |
| !!! | TAGAAGTACATTTTGATTAT+AGG | - | chr1_3:75856769-75856788 | Msa0141100:intron | 20.0% |
| !! | AATATAAGATACAATATGAG+TGG | - | chr1_3:75856948-75856967 | Msa0141100:intron | 20.0% |
| !! | TTATTAATTCATAAATCAGG+AGG | - | chr1_3:75857265-75857284 | Msa0141100:intron | 20.0% |
| ! | TGTTACAGAAATTAGAATTG+AGG | + | chr1_3:75855793-75855812 | None:intergenic | 25.0% |
| !!! | TTGTATGCATTTACTTTTGT+AGG | + | chr1_3:75856000-75856019 | None:intergenic | 25.0% |
| !!! | ATACAAAAAAGTATCCATCA+AGG | - | chr1_3:75856014-75856033 | Msa0141100:intron | 25.0% |
| ! | AAATATCATGATTTCCTTGA+TGG | + | chr1_3:75856031-75856050 | None:intergenic | 25.0% |
| ! | TGTTAATGTTGTGTATAACT+CGG | - | chr1_3:75856293-75856312 | Msa0141100:CDS | 25.0% |
| ! | CAATTACATCATTATGAGTT+TGG | + | chr1_3:75856358-75856377 | None:intergenic | 25.0% |
| ! | TAACGTTAAATTATAGGACA+AGG | + | chr1_3:75856395-75856414 | None:intergenic | 25.0% |
| !! | AAATTTAAAATGACAAAGCG+TGG | + | chr1_3:75856465-75856484 | None:intergenic | 25.0% |
| !! | GTTTTATCCATAAAAGGAAT+TGG | - | chr1_3:75856537-75856556 | Msa0141100:intron | 25.0% |
| !!! | AAGTACATTTTGATTATAGG+TGG | - | chr1_3:75856772-75856791 | Msa0141100:intron | 25.0% |
| ! | CTTACATAAACTAAAACAGA+AGG | - | chr1_3:75857157-75857176 | Msa0141100:intron | 25.0% |
| ! | ACACCATAATTTAATGTATG+TGG | - | chr1_3:75857235-75857254 | Msa0141100:intron | 25.0% |
| ! | ATGCCACATACATTAAATTA+TGG | + | chr1_3:75857241-75857260 | None:intergenic | 25.0% |
| !!! | GTACTTTATTTTTCCAAACA+TGG | - | chr1_3:75857325-75857344 | Msa0141100:intron | 25.0% |
| ! | TGTTACAGAAATTAGAATTG+AGG | + | chr1_3:75855793-75855812 | None:intergenic | 25.0% |
| !!! | TTGTATGCATTTACTTTTGT+AGG | + | chr1_3:75856000-75856019 | None:intergenic | 25.0% |
| !!! | ATACAAAAAAGTATCCATCA+AGG | - | chr1_3:75856014-75856033 | Msa0141100:intron | 25.0% |
| ! | AAATATCATGATTTCCTTGA+TGG | + | chr1_3:75856031-75856050 | None:intergenic | 25.0% |
| ! | TGTTAATGTTGTGTATAACT+CGG | - | chr1_3:75856293-75856312 | Msa0141100:CDS | 25.0% |
| ! | CAATTACATCATTATGAGTT+TGG | + | chr1_3:75856358-75856377 | None:intergenic | 25.0% |
| ! | TAACGTTAAATTATAGGACA+AGG | + | chr1_3:75856395-75856414 | None:intergenic | 25.0% |
| !! | AAATTTAAAATGACAAAGCG+TGG | + | chr1_3:75856465-75856484 | None:intergenic | 25.0% |
| !! | GTTTTATCCATAAAAGGAAT+TGG | - | chr1_3:75856537-75856556 | Msa0141100:intron | 25.0% |
| !!! | AAGTACATTTTGATTATAGG+TGG | - | chr1_3:75856772-75856791 | Msa0141100:intron | 25.0% |
| ! | CTTACATAAACTAAAACAGA+AGG | - | chr1_3:75857157-75857176 | Msa0141100:intron | 25.0% |
| ! | ACACCATAATTTAATGTATG+TGG | - | chr1_3:75857235-75857254 | Msa0141100:intron | 25.0% |
| ! | ATGCCACATACATTAAATTA+TGG | + | chr1_3:75857241-75857260 | None:intergenic | 25.0% |
| !!! | GTACTTTATTTTTCCAAACA+TGG | - | chr1_3:75857325-75857344 | Msa0141100:intron | 25.0% |
| ! | TACTGATAAAAGCATAATCC+TGG | + | chr1_3:75855657-75855676 | None:intergenic | 30.0% |
| ! | AGAAAAACATGCTTTTAGAC+TGG | - | chr1_3:75856199-75856218 | Msa0141100:intron | 30.0% |
| TTGATATGGTAATTCGTCTT+GGG | + | chr1_3:75856240-75856259 | None:intergenic | 30.0% | |
| ATTGATATGGTAATTCGTCT+TGG | + | chr1_3:75856241-75856260 | None:intergenic | 30.0% | |
| ! | ATCAAGTCCAATTCCTTTTA+TGG | + | chr1_3:75856547-75856566 | None:intergenic | 30.0% |
| TTGCAATTACAGATAGTGTT+TGG | - | chr1_3:75856571-75856590 | Msa0141100:intron | 30.0% | |
| AATGCATTCATTTATTGCCA+AGG | - | chr1_3:75856718-75856737 | Msa0141100:intron | 30.0% | |
| ATGCATTCATTTATTGCCAA+GGG | - | chr1_3:75856719-75856738 | Msa0141100:intron | 30.0% | |
| ! | TTTATGTTCGTTGCAGTTTT+CGG | + | chr1_3:75856993-75857012 | None:intergenic | 30.0% |
| AAAACTGCAACGAACATAAA+AGG | - | chr1_3:75856993-75857012 | Msa0141100:intron | 30.0% | |
| ! | CGAACATAAAAGGTATGTAT+AGG | - | chr1_3:75857003-75857022 | Msa0141100:intron | 30.0% |
| ! | CATAAAAGGTATGTATAGGA+AGG | - | chr1_3:75857007-75857026 | Msa0141100:intron | 30.0% |
| TAGTTTATGTAAGAGTCTCA+CGG | + | chr1_3:75857150-75857169 | None:intergenic | 30.0% | |
| TTGATCATGGAAAAGAAAAC+CGG | + | chr1_3:75857455-75857474 | None:intergenic | 30.0% | |
| ! | TACTGATAAAAGCATAATCC+TGG | + | chr1_3:75855657-75855676 | None:intergenic | 30.0% |
| ! | AGAAAAACATGCTTTTAGAC+TGG | - | chr1_3:75856199-75856218 | Msa0141100:intron | 30.0% |
| TTGATATGGTAATTCGTCTT+GGG | + | chr1_3:75856240-75856259 | None:intergenic | 30.0% | |
| ATTGATATGGTAATTCGTCT+TGG | + | chr1_3:75856241-75856260 | None:intergenic | 30.0% | |
| ! | ATCAAGTCCAATTCCTTTTA+TGG | + | chr1_3:75856547-75856566 | None:intergenic | 30.0% |
| TTGCAATTACAGATAGTGTT+TGG | - | chr1_3:75856571-75856590 | Msa0141100:intron | 30.0% | |
| AATGCATTCATTTATTGCCA+AGG | - | chr1_3:75856718-75856737 | Msa0141100:intron | 30.0% | |
| ATGCATTCATTTATTGCCAA+GGG | - | chr1_3:75856719-75856738 | Msa0141100:intron | 30.0% | |
| ! | TTTATGTTCGTTGCAGTTTT+CGG | + | chr1_3:75856993-75857012 | None:intergenic | 30.0% |
| AAAACTGCAACGAACATAAA+AGG | - | chr1_3:75856993-75857012 | Msa0141100:intron | 30.0% | |
| ! | CGAACATAAAAGGTATGTAT+AGG | - | chr1_3:75857003-75857022 | Msa0141100:intron | 30.0% |
| ! | CATAAAAGGTATGTATAGGA+AGG | - | chr1_3:75857007-75857026 | Msa0141100:intron | 30.0% |
| TAGTTTATGTAAGAGTCTCA+CGG | + | chr1_3:75857150-75857169 | None:intergenic | 30.0% | |
| TTGATCATGGAAAAGAAAAC+CGG | + | chr1_3:75857455-75857474 | None:intergenic | 30.0% | |
| TTCAGTGAATACAGCATTCT+GGG | + | chr1_3:75855692-75855711 | None:intergenic | 35.0% | |
| GAGCCAGGATAAATTATCAA+GGG | - | chr1_3:75855878-75855897 | Msa0141100:intron | 35.0% | |
| ! | ACATGCTTTTAGACTGGAAT+CGG | - | chr1_3:75856205-75856224 | Msa0141100:intron | 35.0% |
| ATTCATTTATTGCCAAGGGA+GGG | - | chr1_3:75856723-75856742 | Msa0141100:intron | 35.0% | |
| !! | TGTTTTTGTCACCACTTATG+TGG | + | chr1_3:75856879-75856898 | None:intergenic | 35.0% |
| GGAAAAATAAAGTACACCCT+CGG | + | chr1_3:75857320-75857339 | None:intergenic | 35.0% | |
| AGAATGTTCATGTCCATGTT+TGG | + | chr1_3:75857341-75857360 | None:intergenic | 35.0% | |
| ! | AAAATTTAGCTCATTCCCTC+CGG | + | chr1_3:75857384-75857403 | None:intergenic | 35.0% |
| AAAGAAAACCGGAATGGAAA+TGG | + | chr1_3:75857444-75857463 | None:intergenic | 35.0% | |
| TTCAGTGAATACAGCATTCT+GGG | + | chr1_3:75855692-75855711 | None:intergenic | 35.0% | |
| GAGCCAGGATAAATTATCAA+GGG | - | chr1_3:75855878-75855897 | Msa0141100:intron | 35.0% | |
| ! | ACATGCTTTTAGACTGGAAT+CGG | - | chr1_3:75856205-75856224 | Msa0141100:intron | 35.0% |
| ATTCATTTATTGCCAAGGGA+GGG | - | chr1_3:75856723-75856742 | Msa0141100:intron | 35.0% | |
| !! | TGTTTTTGTCACCACTTATG+TGG | + | chr1_3:75856879-75856898 | None:intergenic | 35.0% |
| GGAAAAATAAAGTACACCCT+CGG | + | chr1_3:75857320-75857339 | None:intergenic | 35.0% | |
| AGAATGTTCATGTCCATGTT+TGG | + | chr1_3:75857341-75857360 | None:intergenic | 35.0% | |
| ! | AAAATTTAGCTCATTCCCTC+CGG | + | chr1_3:75857384-75857403 | None:intergenic | 35.0% |
| AAAGAAAACCGGAATGGAAA+TGG | + | chr1_3:75857444-75857463 | None:intergenic | 35.0% | |
| CTTCAGTGAATACAGCATTC+TGG | + | chr1_3:75855693-75855712 | None:intergenic | 40.0% | |
| TTCAACTTCGTGTTGTCTAG+AGG | + | chr1_3:75855734-75855753 | None:intergenic | 40.0% | |
| GGAGCCAGGATAAATTATCA+AGG | - | chr1_3:75855877-75855896 | Msa0141100:intron | 40.0% | |
| ! | CCACCCTTGATAATTTATCC+TGG | + | chr1_3:75855884-75855903 | None:intergenic | 40.0% |
| CCAGGATAAATTATCAAGGG+TGG | - | chr1_3:75855881-75855900 | Msa0141100:intron | 40.0% | |
| TTACAGATAGTGTTTGGCAG+TGG | - | chr1_3:75856577-75856596 | Msa0141100:intron | 40.0% | |
| CATTCATTTATTGCCAAGGG+AGG | - | chr1_3:75856722-75856741 | Msa0141100:intron | 40.0% | |
| TTCATTTATTGCCAAGGGAG+GGG | - | chr1_3:75856724-75856743 | Msa0141100:intron | 40.0% | |
| AGTTCATGGTTCCACATAAG+TGG | - | chr1_3:75856865-75856884 | Msa0141100:intron | 40.0% | |
| CATGGAAAAGAAAACCGGAA+TGG | + | chr1_3:75857450-75857469 | None:intergenic | 40.0% | |
| CGTTTGATCTCGATTGATCA+TGG | + | chr1_3:75857468-75857487 | None:intergenic | 40.0% | |
| TGATCAATCGAGATCAAACG+AGG | - | chr1_3:75857468-75857487 | Msa0141100:CDS | 40.0% | |
| GATCAATCGAGATCAAACGA+GGG | - | chr1_3:75857469-75857488 | Msa0141100:CDS | 40.0% | |
| CTTCAGTGAATACAGCATTC+TGG | + | chr1_3:75855693-75855712 | None:intergenic | 40.0% | |
| TTCAACTTCGTGTTGTCTAG+AGG | + | chr1_3:75855734-75855753 | None:intergenic | 40.0% | |
| GGAGCCAGGATAAATTATCA+AGG | - | chr1_3:75855877-75855896 | Msa0141100:intron | 40.0% | |
| ! | CCACCCTTGATAATTTATCC+TGG | + | chr1_3:75855884-75855903 | None:intergenic | 40.0% |
| CCAGGATAAATTATCAAGGG+TGG | - | chr1_3:75855881-75855900 | Msa0141100:intron | 40.0% | |
| TTACAGATAGTGTTTGGCAG+TGG | - | chr1_3:75856577-75856596 | Msa0141100:intron | 40.0% | |
| CATTCATTTATTGCCAAGGG+AGG | - | chr1_3:75856722-75856741 | Msa0141100:intron | 40.0% | |
| TTCATTTATTGCCAAGGGAG+GGG | - | chr1_3:75856724-75856743 | Msa0141100:intron | 40.0% | |
| AGTTCATGGTTCCACATAAG+TGG | - | chr1_3:75856865-75856884 | Msa0141100:intron | 40.0% | |
| CATGGAAAAGAAAACCGGAA+TGG | + | chr1_3:75857450-75857469 | None:intergenic | 40.0% | |
| CGTTTGATCTCGATTGATCA+TGG | + | chr1_3:75857468-75857487 | None:intergenic | 40.0% | |
| TGATCAATCGAGATCAAACG+AGG | - | chr1_3:75857468-75857487 | Msa0141100:CDS | 40.0% | |
| GATCAATCGAGATCAAACGA+GGG | - | chr1_3:75857469-75857488 | Msa0141100:CDS | 40.0% | |
| TAATCCTGGTCCAACAATCG+TGG | + | chr1_3:75855643-75855662 | None:intergenic | 45.0% | |
| GATGAGCCATGAAGAGACAT+GGG | + | chr1_3:75855771-75855790 | None:intergenic | 45.0% | |
| ACCAATCATGCCCTAGTGAA+TGG | - | chr1_3:75855833-75855852 | Msa0141100:intron | 45.0% | |
| TCCATTCACTAGGGCATGAT+TGG | + | chr1_3:75855837-75855856 | None:intergenic | 45.0% | |
| AATCATGCCCTAGTGAATGG+AGG | - | chr1_3:75855836-75855855 | Msa0141100:intron | 45.0% | |
| CAACGTACCTCCATTCACTA+GGG | + | chr1_3:75855846-75855865 | None:intergenic | 45.0% | |
| CCATGAAGCTTGTGAGAACA+AGG | + | chr1_3:75856177-75856196 | None:intergenic | 45.0% | |
| CCTTGTTCTCACAAGCTTCA+TGG | - | chr1_3:75856174-75856193 | Msa0141100:intron | 45.0% | |
| AAGTGATTGTGGTGCAACCA+GGG | + | chr1_3:75856804-75856823 | None:intergenic | 45.0% | |
| CTTCGTTGTGCAAGTGATTG+TGG | + | chr1_3:75856815-75856834 | None:intergenic | 45.0% | |
| AATCACTTGCACAACGAAGC+AGG | - | chr1_3:75856816-75856835 | Msa0141100:intron | 45.0% | |
| ATCACTTGCACAACGAAGCA+GGG | - | chr1_3:75856817-75856836 | Msa0141100:intron | 45.0% | |
| TGCTGTACTGTCGAAGTTCA+TGG | - | chr1_3:75856851-75856870 | Msa0141100:intron | 45.0% | |
| TTTACTGTCTGTCTCGTTGC+TGG | - | chr1_3:75856916-75856935 | Msa0141100:intron | 45.0% | |
| AGGATGCCTAACTTCTGAAC+AGG | - | chr1_3:75857285-75857304 | Msa0141100:intron | 45.0% | |
| TGCCTAACTTCTGAACAGGA+TGG | - | chr1_3:75857289-75857308 | Msa0141100:intron | 45.0% | |
| GCCTAACTTCTGAACAGGAT+GGG | - | chr1_3:75857290-75857309 | Msa0141100:intron | 45.0% | |
| CCTAACTTCTGAACAGGATG+GGG | - | chr1_3:75857291-75857310 | Msa0141100:intron | 45.0% | |
| CTCTTGATGCTTCCTCTAAC+CGG | - | chr1_3:75857362-75857381 | Msa0141100:intron | 45.0% | |
| TGTCTGCTGCAGACTTAGAT+TGG | - | chr1_3:75857414-75857433 | Msa0141100:CDS | 45.0% | |
| TAATCCTGGTCCAACAATCG+TGG | + | chr1_3:75855643-75855662 | None:intergenic | 45.0% | |
| GATGAGCCATGAAGAGACAT+GGG | + | chr1_3:75855771-75855790 | None:intergenic | 45.0% | |
| ACCAATCATGCCCTAGTGAA+TGG | - | chr1_3:75855833-75855852 | Msa0141100:intron | 45.0% | |
| TCCATTCACTAGGGCATGAT+TGG | + | chr1_3:75855837-75855856 | None:intergenic | 45.0% | |
| AATCATGCCCTAGTGAATGG+AGG | - | chr1_3:75855836-75855855 | Msa0141100:intron | 45.0% | |
| CAACGTACCTCCATTCACTA+GGG | + | chr1_3:75855846-75855865 | None:intergenic | 45.0% | |
| CCATGAAGCTTGTGAGAACA+AGG | + | chr1_3:75856177-75856196 | None:intergenic | 45.0% | |
| CCTTGTTCTCACAAGCTTCA+TGG | - | chr1_3:75856174-75856193 | Msa0141100:intron | 45.0% | |
| AAGTGATTGTGGTGCAACCA+GGG | + | chr1_3:75856804-75856823 | None:intergenic | 45.0% | |
| CTTCGTTGTGCAAGTGATTG+TGG | + | chr1_3:75856815-75856834 | None:intergenic | 45.0% | |
| AATCACTTGCACAACGAAGC+AGG | - | chr1_3:75856816-75856835 | Msa0141100:intron | 45.0% | |
| ATCACTTGCACAACGAAGCA+GGG | - | chr1_3:75856817-75856836 | Msa0141100:intron | 45.0% | |
| TGCTGTACTGTCGAAGTTCA+TGG | - | chr1_3:75856851-75856870 | Msa0141100:intron | 45.0% | |
| TTTACTGTCTGTCTCGTTGC+TGG | - | chr1_3:75856916-75856935 | Msa0141100:intron | 45.0% | |
| AGGATGCCTAACTTCTGAAC+AGG | - | chr1_3:75857285-75857304 | Msa0141100:intron | 45.0% | |
| TGCCTAACTTCTGAACAGGA+TGG | - | chr1_3:75857289-75857308 | Msa0141100:intron | 45.0% | |
| GCCTAACTTCTGAACAGGAT+GGG | - | chr1_3:75857290-75857309 | Msa0141100:intron | 45.0% | |
| CCTAACTTCTGAACAGGATG+GGG | - | chr1_3:75857291-75857310 | Msa0141100:intron | 45.0% | |
| CTCTTGATGCTTCCTCTAAC+CGG | - | chr1_3:75857362-75857381 | Msa0141100:intron | 45.0% | |
| TGTCTGCTGCAGACTTAGAT+TGG | - | chr1_3:75857414-75857433 | Msa0141100:CDS | 45.0% | |
| !! | TGTATATTATAAAAATAAAA+AGG | - | chr1_3:75856688-75856707 | Msa0141100:intron | 5.0% |
| !! | TGTATATTATAAAAATAAAA+AGG | - | chr1_3:75856688-75856707 | Msa0141100:intron | 5.0% |
| CCAACAATCGTGGTTGCAAC+TGG | + | chr1_3:75855633-75855652 | None:intergenic | 50.0% | |
| CCAGTTGCAACCACGATTGT+TGG | - | chr1_3:75855630-75855649 | Msa0141100:CDS | 50.0% | |
| TGAATACAGCATTCTGGGCG+AGG | + | chr1_3:75855687-75855706 | None:intergenic | 50.0% | |
| AAGAGACATGGGATGCGACA+CGG | + | chr1_3:75855760-75855779 | None:intergenic | 50.0% | |
| TCGCATCCCATGTCTCTTCA+TGG | - | chr1_3:75855762-75855781 | Msa0141100:CDS | 50.0% | |
| GGATGAGCCATGAAGAGACA+TGG | + | chr1_3:75855772-75855791 | None:intergenic | 50.0% | |
| GCAACGTACCTCCATTCACT+AGG | + | chr1_3:75855847-75855866 | None:intergenic | 50.0% | |
| TGGCTGCAGAGTCATGTTTG+TGG | + | chr1_3:75856445-75856464 | None:intergenic | 50.0% | |
| ATTTATTGCCAAGGGAGGGG+TGG | - | chr1_3:75856727-75856746 | Msa0141100:intron | 50.0% | |
| CAAGTGATTGTGGTGCAACC+AGG | + | chr1_3:75856805-75856824 | None:intergenic | 50.0% | |
| CCCCATCCTGTTCAGAAGTT+AGG | + | chr1_3:75857294-75857313 | None:intergenic | 50.0% | |
| AACTTCTGAACAGGATGGGG+TGG | - | chr1_3:75857294-75857313 | Msa0141100:intron | 50.0% | |
| !! | CGGTTAGAGGAAGCATCAAG+AGG | + | chr1_3:75857364-75857383 | None:intergenic | 50.0% |
| TTGATGCTTCCTCTAACCGG+AGG | - | chr1_3:75857365-75857384 | Msa0141100:intron | 50.0% | |
| TGATGCTTCCTCTAACCGGA+GGG | - | chr1_3:75857366-75857385 | Msa0141100:intron | 50.0% | |
| TTGGTGCGCCATTTCCATTC+CGG | - | chr1_3:75857433-75857452 | Msa0141100:CDS | 50.0% | |
| CCAACAATCGTGGTTGCAAC+TGG | + | chr1_3:75855633-75855652 | None:intergenic | 50.0% | |
| CCAGTTGCAACCACGATTGT+TGG | - | chr1_3:75855630-75855649 | Msa0141100:CDS | 50.0% | |
| TGAATACAGCATTCTGGGCG+AGG | + | chr1_3:75855687-75855706 | None:intergenic | 50.0% | |
| AAGAGACATGGGATGCGACA+CGG | + | chr1_3:75855760-75855779 | None:intergenic | 50.0% | |
| TCGCATCCCATGTCTCTTCA+TGG | - | chr1_3:75855762-75855781 | Msa0141100:CDS | 50.0% | |
| GGATGAGCCATGAAGAGACA+TGG | + | chr1_3:75855772-75855791 | None:intergenic | 50.0% | |
| GCAACGTACCTCCATTCACT+AGG | + | chr1_3:75855847-75855866 | None:intergenic | 50.0% | |
| TGGCTGCAGAGTCATGTTTG+TGG | + | chr1_3:75856445-75856464 | None:intergenic | 50.0% | |
| ATTTATTGCCAAGGGAGGGG+TGG | - | chr1_3:75856727-75856746 | Msa0141100:intron | 50.0% | |
| CAAGTGATTGTGGTGCAACC+AGG | + | chr1_3:75856805-75856824 | None:intergenic | 50.0% | |
| CCCCATCCTGTTCAGAAGTT+AGG | + | chr1_3:75857294-75857313 | None:intergenic | 50.0% | |
| AACTTCTGAACAGGATGGGG+TGG | - | chr1_3:75857294-75857313 | Msa0141100:intron | 50.0% | |
| !! | CGGTTAGAGGAAGCATCAAG+AGG | + | chr1_3:75857364-75857383 | None:intergenic | 50.0% |
| TTGATGCTTCCTCTAACCGG+AGG | - | chr1_3:75857365-75857384 | Msa0141100:intron | 50.0% | |
| TGATGCTTCCTCTAACCGGA+GGG | - | chr1_3:75857366-75857385 | Msa0141100:intron | 50.0% | |
| TTGGTGCGCCATTTCCATTC+CGG | - | chr1_3:75857433-75857452 | Msa0141100:CDS | 50.0% | |
| GCAACCACGATTGTTGGACC+AGG | - | chr1_3:75855636-75855655 | Msa0141100:CDS | 55.0% | |
| AGAGACATGGGATGCGACAC+GGG | + | chr1_3:75855759-75855778 | None:intergenic | 55.0% | |
| ! | AATGGAGGTACGTTGCACCC+AGG | - | chr1_3:75855851-75855870 | Msa0141100:intron | 55.0% |
| ! | ATGGAGGTACGTTGCACCCA+GGG | - | chr1_3:75855852-75855871 | Msa0141100:intron | 55.0% |
| TTTATCCTGGCTCCGTCCCT+GGG | + | chr1_3:75855871-75855890 | None:intergenic | 55.0% | |
| ATTTATCCTGGCTCCGTCCC+TGG | + | chr1_3:75855872-75855891 | None:intergenic | 55.0% | |
| ATTATAGGTGGCTCCGTCCC+TGG | - | chr1_3:75856784-75856803 | Msa0141100:intron | 55.0% | |
| GATTGTGGTGCAACCAGGGA+CGG | + | chr1_3:75856800-75856819 | None:intergenic | 55.0% | |
| AGCTCATTCCCTCCGGTTAG+AGG | + | chr1_3:75857377-75857396 | None:intergenic | 55.0% | |
| GCAACCACGATTGTTGGACC+AGG | - | chr1_3:75855636-75855655 | Msa0141100:CDS | 55.0% | |
| AGAGACATGGGATGCGACAC+GGG | + | chr1_3:75855759-75855778 | None:intergenic | 55.0% | |
| ! | AATGGAGGTACGTTGCACCC+AGG | - | chr1_3:75855851-75855870 | Msa0141100:intron | 55.0% |
| ! | ATGGAGGTACGTTGCACCCA+GGG | - | chr1_3:75855852-75855871 | Msa0141100:intron | 55.0% |
| TTTATCCTGGCTCCGTCCCT+GGG | + | chr1_3:75855871-75855890 | None:intergenic | 55.0% | |
| ATTTATCCTGGCTCCGTCCC+TGG | + | chr1_3:75855872-75855891 | None:intergenic | 55.0% | |
| ATTATAGGTGGCTCCGTCCC+TGG | - | chr1_3:75856784-75856803 | Msa0141100:intron | 55.0% | |
| GATTGTGGTGCAACCAGGGA+CGG | + | chr1_3:75856800-75856819 | None:intergenic | 55.0% | |
| AGCTCATTCCCTCCGGTTAG+AGG | + | chr1_3:75857377-75857396 | None:intergenic | 55.0% | |
| AGGTACGTTGCACCCAGGGA+CGG | - | chr1_3:75855856-75855875 | Msa0141100:intron | 60.0% | |
| AATGATCGCCACCCCTCCCT+TGG | + | chr1_3:75856738-75856757 | None:intergenic | 60.0% | |
| AGGTACGTTGCACCCAGGGA+CGG | - | chr1_3:75855856-75855875 | Msa0141100:intron | 60.0% | |
| AATGATCGCCACCCCTCCCT+TGG | + | chr1_3:75856738-75856757 | None:intergenic | 60.0% | |
| TGAACAGGATGGGGTGGCCG+AGG | - | chr1_3:75857300-75857319 | Msa0141100:intron | 65.0% | |
| GAACAGGATGGGGTGGCCGA+GGG | - | chr1_3:75857301-75857320 | Msa0141100:intron | 65.0% | |
| TGAACAGGATGGGGTGGCCG+AGG | - | chr1_3:75857300-75857319 | Msa0141100:intron | 65.0% | |
| GAACAGGATGGGGTGGCCGA+GGG | - | chr1_3:75857301-75857320 | Msa0141100:intron | 65.0% | |
| TTGCACCCAGGGACGGAGCC+AGG | - | chr1_3:75855863-75855882 | Msa0141100:intron | 70.0% | |
| TTGCACCCAGGGACGGAGCC+AGG | - | chr1_3:75855863-75855882 | Msa0141100:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 75855619 | 75857523 | 75855619 | ID=Msa0141100;Name=Msa0141100 |
| chr1_3 | mRNA | 75855619 | 75857523 | 75855619 | ID=Msa0141100-mRNA-1;Parent=Msa0141100;Name=Msa0141100-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|1|0|0|3|0|150 |
| chr1_3 | exon | 75857384 | 75857523 | 75857384 | ID=Msa0141100-mRNA-1:exon:26499;Parent=Msa0141100-mRNA-1 |
| chr1_3 | exon | 75856256 | 75856351 | 75856256 | ID=Msa0141100-mRNA-1:exon:26498;Parent=Msa0141100-mRNA-1 |
| chr1_3 | exon | 75855619 | 75855835 | 75855619 | ID=Msa0141100-mRNA-1:exon:26497;Parent=Msa0141100-mRNA-1 |
| chr1_3 | CDS | 75857384 | 75857523 | 75857384 | ID=Msa0141100-mRNA-1:cds;Parent=Msa0141100-mRNA-1 |
| chr1_3 | CDS | 75856256 | 75856351 | 75856256 | ID=Msa0141100-mRNA-1:cds;Parent=Msa0141100-mRNA-1 |
| chr1_3 | CDS | 75855619 | 75855835 | 75855619 | ID=Msa0141100-mRNA-1:cds;Parent=Msa0141100-mRNA-1 |
| Gene Sequence |
| Protein sequence |
