AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0577750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577750 MtrunA17_Chr8g0377501 97.294 961 25 1 1 960 8 968 0.0 1949
Msa0577750 MtrunA17_Chr3g0122351 60.142 986 320 12 1 957 1 942 0.0 1098
Msa0577750 MtrunA17_Chr2g0279141 41.318 622 278 21 388 956 439 1026 4.76e-132 423
Msa0577750 MtrunA17_Chr2g0279141 49.180 183 81 4 4 179 10 187 3.76e-45 176
Msa0577750 MtrunA17_Chr4g0068161 33.299 970 521 29 6 935 24 907 2.20e-126 405
Msa0577750 MtrunA17_Chr8g0382191 41.889 561 280 12 394 926 496 1038 2.72e-126 409
Msa0577750 MtrunA17_Chr8g0382191 45.918 196 87 4 6 188 8 197 2.93e-46 180
Msa0577750 MtrunA17_Chr4g0050401 39.228 622 304 19 388 959 426 1023 2.83e-121 394
Msa0577750 MtrunA17_Chr4g0050401 50.641 156 70 1 8 156 14 169 1.18e-42 169
Msa0577750 MtrunA17_Chr2g0294711 33.059 971 507 34 6 933 24 894 1.64e-119 387
Msa0577750 MtrunA17_Chr8g0382181 30.346 491 262 17 49 489 8 468 2.42e-47 176
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0577750 AT1G67310.1 52.333 986 394 21 3 939 32 990 0.0 897
Msa0577750 AT5G09410.4 40.806 620 292 21 389 956 276 872 1.18e-124 400
Msa0577750 AT5G09410.2 40.806 620 292 21 389 956 397 993 2.33e-123 400
Msa0577750 AT5G09410.2 54.745 137 62 0 1 137 10 146 1.58e-45 178
Msa0577750 AT5G09410.1 40.806 620 292 21 389 956 379 975 3.88e-123 399
Msa0577750 AT5G09410.1 54.745 137 62 0 1 137 10 146 1.77e-45 178
Msa0577750 AT5G09410.3 40.806 620 292 21 389 956 456 1052 3.27e-122 398
Msa0577750 AT5G09410.3 44.910 167 62 1 1 137 69 235 1.59e-40 162
Msa0577750 AT2G22300.3 41.593 565 261 13 392 926 396 921 1.95e-121 394
Msa0577750 AT2G22300.3 38.919 185 106 3 53 235 1 180 4.50e-31 132
Msa0577750 AT2G22300.2 41.593 565 261 13 392 926 454 979 9.68e-121 393
Msa0577750 AT2G22300.2 40.343 233 132 3 5 235 11 238 4.78e-48 186
Msa0577750 AT2G22300.1 41.593 565 261 13 392 926 454 979 9.68e-121 393
Msa0577750 AT2G22300.1 40.343 233 132 3 5 235 11 238 4.78e-48 186
Msa0577750 AT5G64220.1 39.864 587 290 16 389 934 446 1010 1.88e-120 393
Msa0577750 AT5G64220.1 49.711 173 74 1 8 180 14 173 6.03e-48 186
Msa0577750 AT5G64220.2 39.864 587 290 16 389 934 446 1010 1.88e-120 393
Msa0577750 AT5G64220.2 49.711 173 74 1 8 180 14 173 6.03e-48 186
Msa0577750 AT3G16940.3 31.295 687 400 22 291 935 155 811 7.04e-79 274
Msa0577750 AT3G16940.3 48.993 149 75 1 12 160 1 148 8.20e-38 153
Msa0577750 AT3G16940.1 31.295 687 400 22 291 935 182 838 1.18e-78 274
Msa0577750 AT3G16940.1 47.742 155 80 1 6 160 22 175 9.19e-39 156
Msa0577750 AT3G16940.2 29.915 585 346 18 291 838 182 739 4.41e-56 207
Msa0577750 AT3G16940.2 53.030 132 62 0 6 137 22 153 3.89e-39 156

Find 243 sgRNAs with CRISPR-Local

Find 542 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGTGCATAGTAACAATTTA+TGG 0.140587 4_1:-82066078 None:intergenic
AGAAACCTCAGCTGACTTTA+AGG 0.172864 4_1:+82067062 Msa0577750:CDS
GTTCACCATCTTCTTCATTA+AGG 0.204228 4_1:+82068908 Msa0577750:CDS
ATTATAGAGGCTCTACTATT+TGG 0.207358 4_1:+82070274 Msa0577750:CDS
GGAAGCATTACAAAGTATTA+TGG 0.222235 4_1:+82071787 Msa0577750:CDS
TCTATTGCATTATCAGTTTC+CGG 0.225698 4_1:+82072439 Msa0577750:three_prime_UTR
AATAATCCCCTGCTCTTTCT+TGG 0.231755 4_1:-82070416 None:intergenic
AAAACAGAAATTTACTATTA+AGG 0.252298 4_1:+82069246 Msa0577750:CDS
CTTCATTGGGCTGCACGTTT+TGG 0.253483 4_1:+82070535 Msa0577750:CDS
GGGATTATTCACATGGTTGC+TGG 0.262638 4_1:+82070430 Msa0577750:CDS
GCCAGGCATGACCATCTTTC+CGG 0.272852 4_1:-82065436 None:intergenic
CTGTTATTACTTGTTAGATT+TGG 0.278401 4_1:+82070157 Msa0577750:CDS
CTTTGTAATGCTTCCTAACT+TGG 0.282011 4_1:-82071779 None:intergenic
ACTTCCTCCATATTCTTCTA+TGG 0.286754 4_1:+82069123 Msa0577750:CDS
GTTACTCTGTGCATTACTTC+TGG 0.291948 4_1:+82070025 Msa0577750:CDS
CCCTTGATGATTCGGTGGTT+TGG 0.297385 4_1:-82067187 None:intergenic
GGAGAAAAGGAGTCGGTTTA+CGG 0.298490 4_1:+82071847 Msa0577750:CDS
ATGGGTGGACTGCCCTTCAT+TGG 0.305451 4_1:+82070521 Msa0577750:CDS
TCAGAGGAATAACCCCATTC+TGG 0.307135 4_1:-82069277 None:intergenic
AATCTTTGTAAAGTATAAAA+TGG 0.314092 4_1:+82072585 Msa0577750:three_prime_UTR
CATCATGAGATGCTCCAATT+TGG 0.318825 4_1:-82069198 None:intergenic
TTGTTTGACCAAAGCCAAAT+TGG 0.322075 4_1:+82069184 Msa0577750:CDS
CTTTCCAGAGGCGGAGCTAT+TGG 0.324977 4_1:+82066117 Msa0577750:CDS
AGTTCCTGTTGAGCTAATTC+AGG 0.325656 4_1:+82069958 Msa0577750:CDS
TTTGGCAGTGAAAATTCTTC+TGG 0.330125 4_1:+82070292 Msa0577750:CDS
GTCATCCCTCTGATTCTGCC+TGG 0.330295 4_1:+82069912 Msa0577750:CDS
ATTCACATGGTTGCTGGGTT+GGG 0.335295 4_1:+82070436 Msa0577750:CDS
TTCACTTGTTTGTGCAAGTT+CGG 0.338414 4_1:-82072318 None:intergenic
TGTTACTTGTTGGCTGTTGC+GGG 0.338603 4_1:-82064828 None:intergenic
ATTATGGGCAGTTGGAATCT+TGG 0.340243 4_1:+82071803 Msa0577750:CDS
TGTTATTACTTGTTAGATTT+GGG 0.340702 4_1:+82070158 Msa0577750:CDS
GTTTCATCCATAGAAGAATA+TGG 0.341126 4_1:-82069130 None:intergenic
TTCACCATCTTCTTCATTAA+GGG 0.346632 4_1:+82068909 Msa0577750:CDS
TAAAATAGCCCCTGGTTATC+TGG 0.347146 4_1:-82067249 None:intergenic
AGCTTCATGCTCGTTGTAGA+AGG 0.349283 4_1:-82067154 None:intergenic
GTGAAACAGTAGAATTGATT+TGG 0.352194 4_1:-82064154 None:intergenic
AGAAGAAGAGTAATTGAATC+TGG 0.352299 4_1:-82064221 None:intergenic
CACATCATCCCTTGATGATT+CGG 0.355017 4_1:-82067195 None:intergenic
ATAGTAGAGCCTCTATAATA+TGG 0.356170 4_1:-82070270 None:intergenic
GAAGAGTATTACGTTTCTTC+CGG 0.359417 4_1:+82065417 Msa0577750:CDS
GAAGTTCCATCTCACATTCC+TGG 0.365550 4_1:+82069998 Msa0577750:CDS
TTCATCTACTTCCCGAGATC+TGG 0.365870 4_1:-82070374 None:intergenic
AAAGTAGATTGTATGTATAT+TGG 0.372896 4_1:+82072532 Msa0577750:three_prime_UTR
ATTCTTCTGGTACTATCAAT+TGG 0.373127 4_1:+82070305 Msa0577750:CDS
TGCAGCTAGCAGCGGGCATA+AGG 0.374436 4_1:+82070927 Msa0577750:CDS
TAACAGCTCATCTGGAGTTC+TGG 0.376239 4_1:-82070140 None:intergenic
TATTCACATGGTTGCTGGGT+TGG 0.377002 4_1:+82070435 Msa0577750:CDS
CCAATTGGATCTTGTGCACT+TGG 0.378723 4_1:-82070886 None:intergenic
ATGTGAGAGGTTACCAAGTT+AGG 0.379390 4_1:+82071766 Msa0577750:CDS
GAGAAAAGGAGTCGGTTTAC+GGG 0.381739 4_1:+82071848 Msa0577750:CDS
GTTGCATCACTTATAGCTTC+TGG 0.385172 4_1:+82070838 Msa0577750:CDS
AGTCATTCCATTGTTATAAG+AGG 0.386448 4_1:-82067013 None:intergenic
CCATCCTGAATTAGCTCAAC+AGG 0.389513 4_1:-82069962 None:intergenic
GCTTCTCTTTCCAATGGAGC+AGG 0.391039 4_1:-82070115 None:intergenic
CATTTCCATCAGGGAAATCA+TGG 0.392414 4_1:-82068715 None:intergenic
GAAGCATTACAAAGTATTAT+GGG 0.396758 4_1:+82071788 Msa0577750:CDS
ATAGCTTCTGGTGCATCTGC+TGG 0.404064 4_1:+82070850 Msa0577750:CDS
ATGCACAGAGTAACCTTTCC+AGG 0.407884 4_1:-82070016 None:intergenic
CATCCATTGCAGCTAGCAGC+GGG 0.408752 4_1:+82070920 Msa0577750:CDS
ACAAGTAATAACAGCTCATC+TGG 0.410138 4_1:-82070148 None:intergenic
TTGTAGGGAAGGCTCAGTTC+TGG 0.411053 4_1:+82066844 Msa0577750:intron
GAGATGCTCCAATTTGGCTT+TGG 0.415155 4_1:-82069192 None:intergenic
TGTGCATTACTTCTGGAAAC+CGG 0.420398 4_1:+82070032 Msa0577750:CDS
TCAAGCTTTGCGCCGATTGG+AGG 0.420689 4_1:+82067089 Msa0577750:CDS
CTGGTGGCTTCTCTTTCCAA+TGG 0.422838 4_1:-82070121 None:intergenic
TCACACCGCAACTGAGAATA+GGG 0.423019 4_1:-82070477 None:intergenic
AGCAGGGTCGGTGAAATTCT+TGG 0.425679 4_1:-82070098 None:intergenic
TACTCAAGCTTTGCGCCGAT+TGG 0.428909 4_1:+82067086 Msa0577750:CDS
CGAACCCGGAAAACTATTGC+TGG 0.430215 4_1:+82068941 Msa0577750:CDS
GAGGAATCCACAGCTCTCTC+TGG 0.431726 4_1:+82067225 Msa0577750:CDS
TCTGCCTGGGCCTGTATGCT+TGG 0.432274 4_1:+82069926 Msa0577750:CDS
TAAGGCTAGCGTTGCTCCCC+AGG 0.434493 4_1:-82072405 None:intergenic
TCATATAGTACTCAGAATCC+AGG 0.436097 4_1:+82066919 Msa0577750:CDS
TGGGTGGACTGCCCTTCATT+GGG 0.436536 4_1:+82070522 Msa0577750:CDS
GGATTATTCACATGGTTGCT+GGG 0.437285 4_1:+82070431 Msa0577750:CDS
TTTCACCGACCCTGCTCCAT+TGG 0.437455 4_1:+82070105 Msa0577750:CDS
TAAGGCAGTCTCCCCAGAAT+GGG 0.443176 4_1:+82069264 Msa0577750:CDS
GAAGCTCTGATTAGGTTCAT+AGG 0.447215 4_1:-82066965 None:intergenic
AGCGGGCATAAGGGACTGGC+AGG 0.447828 4_1:+82070937 Msa0577750:CDS
TGATATTGCTCACGAGCATC+AGG 0.448217 4_1:-82071996 None:intergenic
CCATCTGTCATCTCTTACAC+TGG 0.451970 4_1:+82070987 Msa0577750:CDS
CAGAGGAATAACCCCATTCT+GGG 0.453671 4_1:-82069276 None:intergenic
CAAAACGTGCAGCCCAATGA+AGG 0.453699 4_1:-82070534 None:intergenic
ATGTTACTTGTTGGCTGTTG+CGG 0.454201 4_1:-82064829 None:intergenic
CCCGGTGACAATTGTGTGCC+AGG 0.454642 4_1:-82066868 None:intergenic
AAGTAATGATAACAACGAAT+CGG 0.457105 4_1:+82070207 Msa0577750:CDS
GATCACATTCATTTAGAAAA+CGG 0.457488 4_1:+82071178 Msa0577750:CDS
ATAAATTTCCGTGATGTCAA+TGG 0.460639 4_1:+82070502 Msa0577750:CDS
AGAAGGCTGATGATGATTCA+TGG 0.462726 4_1:+82070245 Msa0577750:CDS
AAAAGAGATGGAAGAGCTGT+AGG 0.467414 4_1:+82065464 Msa0577750:CDS
AGTAGATGTGGAAATTGAAA+AGG 0.467562 4_1:+82071941 Msa0577750:CDS
GGACTGGAGAAGCTCTGATT+AGG 0.467985 4_1:-82066973 None:intergenic
TCATCCCTCTGATTCTGCCT+GGG 0.473426 4_1:+82069913 Msa0577750:CDS
TTACGTTTCTTCCGGAAAGA+TGG 0.474223 4_1:+82065425 Msa0577750:CDS
TAGCTCCGCCTCTGGAAAGT+AGG 0.474330 4_1:-82066113 None:intergenic
GTGCTAAGATGGCGGAGAAA+AGG 0.474475 4_1:+82071834 Msa0577750:CDS
TTCACACCGCAACTGAGAAT+AGG 0.474658 4_1:-82070478 None:intergenic
ATGAATGAAATGAAATCAAA+AGG 0.475216 4_1:-82064195 None:intergenic
TATATTCTTGTAGGTGATAG+TGG 0.478429 4_1:+82068668 Msa0577750:intron
CGTGGCTTACTTCCAGATCT+CGG 0.478848 4_1:+82070362 Msa0577750:CDS
TTCTTTGTCCAAGAAAGAGC+AGG 0.480183 4_1:+82070408 Msa0577750:CDS
TAAACAACGGACGTTGACCC+TGG 0.483608 4_1:-82066937 None:intergenic
TCTTCTTCTACCATGACATC+TGG 0.484799 4_1:+82064235 Msa0577750:exon
AATCAGAGCTTCTCCAGTCC+TGG 0.487676 4_1:+82066976 Msa0577750:CDS
GCTTCTTGAAGAGCTACTAA+AGG 0.488943 4_1:+82070327 Msa0577750:CDS
TTCAGAAGAAATATCGAGGT+TGG 0.489389 4_1:+82071337 Msa0577750:CDS
AATGCACCTTCAGCCGTTCG+TGG 0.490374 4_1:-82065493 None:intergenic
CAATAGAGTTGAAATTAGTA+AGG 0.494219 4_1:-82072423 None:intergenic
AGTAATGATAACAACGAATC+GGG 0.494514 4_1:+82070208 Msa0577750:CDS
GAAATGAAAAGGCTCTATCA+TGG 0.494556 4_1:+82068732 Msa0577750:CDS
TGACTTCACTGCATGACTCC+CGG 0.494680 4_1:-82070051 None:intergenic
GCAACTGAGAATAGGGTTCA+AGG 0.496854 4_1:-82070470 None:intergenic
ACATCCAATAGCTCCGCCTC+TGG 0.497187 4_1:-82066121 None:intergenic
TTCCGGCATCAACATTCTGT+TGG 0.497246 4_1:+82072456 Msa0577750:three_prime_UTR
GAGGTAACTTCTGCAGATCC+AGG 0.497445 4_1:-82066994 None:intergenic
TGGACAAGGTTGTGCTAAGA+TGG 0.498360 4_1:+82071823 Msa0577750:CDS
GCATCCATTGCAGCTAGCAG+CGG 0.501501 4_1:+82070919 Msa0577750:CDS
TAAATTTCCGTGATGTCAAT+GGG 0.503471 4_1:+82070503 Msa0577750:CDS
CTAGACCATGATTTCCCTGA+TGG 0.505531 4_1:+82068710 Msa0577750:CDS
TAGCAGCGGGCATAAGGGAC+TGG 0.507308 4_1:+82070933 Msa0577750:CDS
TTTCCCTGATGGAAATGAAA+AGG 0.507835 4_1:+82068721 Msa0577750:CDS
AATTTCAACACTGATAATGC+TGG 0.508070 4_1:+82068967 Msa0577750:CDS
AACTTAACTGCACCTCCAAT+CGG 0.509739 4_1:-82067101 None:intergenic
TACAAAGTATTATGGGCAGT+TGG 0.512430 4_1:+82071795 Msa0577750:CDS
TGTATTTCTGACAGCAGCTA+AGG 0.517159 4_1:-82071121 None:intergenic
GTGGCTTACTTCCAGATCTC+GGG 0.517721 4_1:+82070363 Msa0577750:CDS
ATGCCCGCTGCTAGCTGCAA+TGG 0.519565 4_1:-82070923 None:intergenic
ACCTGGCACACAATTGTCAC+CGG 0.520234 4_1:+82066867 Msa0577750:CDS
TCCAAACCACCGAATCATCA+AGG 0.520384 4_1:+82067186 Msa0577750:CDS
CCAAGTGCACAAGATCCAAT+TGG 0.522680 4_1:+82070886 Msa0577750:CDS
AAAATGTACATCACTTCTGC+AGG 0.523652 4_1:-82064769 None:intergenic
TTCAACATCACCAAGCATAC+AGG 0.525286 4_1:-82069936 None:intergenic
TCCGGAAAGATGGTCATGCC+TGG 0.525525 4_1:+82065435 Msa0577750:CDS
GGGTTTCAAACCAGAGATGC+AGG 0.526149 4_1:+82071869 Msa0577750:CDS
AAGAAATATCGAGGTTGGAA+AGG 0.529924 4_1:+82071342 Msa0577750:CDS
GCAGCTAGCAGCGGGCATAA+GGG 0.531238 4_1:+82070928 Msa0577750:CDS
ATCACCAAGCATACAGGCCC+AGG 0.535400 4_1:-82069930 None:intergenic
CTTGACATAGCATAAAGCTC+TGG 0.536851 4_1:-82071267 None:intergenic
AGCTCCGCCTCTGGAAAGTA+GGG 0.537194 4_1:-82066112 None:intergenic
TTAAGGCAGTCTCCCCAGAA+TGG 0.537679 4_1:+82069263 Msa0577750:CDS
TAAACAAACACGCGTAGAGA+TGG 0.539052 4_1:-82064130 None:intergenic
AAAGAAAGAGACAAGAGAGT+TGG 0.540143 4_1:-82064099 None:intergenic
GCTACTAAAGGATAAGCTAC+AGG 0.543205 4_1:+82070339 Msa0577750:CDS
TCCATCTCACATTCCTGGAA+AGG 0.544442 4_1:+82070003 Msa0577750:CDS
ATTGGAGCATCTCATGATGC+TGG 0.547038 4_1:+82069202 Msa0577750:CDS
TCTCTCTGGACCAGATAACC+AGG 0.547626 4_1:+82067239 Msa0577750:CDS
TTCATGGAGCCATATTATAG+AGG 0.548594 4_1:+82070261 Msa0577750:CDS
GCAATACTTACATTTCCTGC+TGG 0.549061 4_1:-82068770 None:intergenic
AACTGTTAGTAATGTCTCCA+AGG 0.549109 4_1:+82071056 Msa0577750:CDS
ATGCACCTTCAGCCGTTCGT+GGG 0.549348 4_1:-82065492 None:intergenic
AACTTCTGCAGATCCAGGAC+TGG 0.551466 4_1:-82066989 None:intergenic
ATCATCCCTTGATGATTCGG+TGG 0.554360 4_1:-82067192 None:intergenic
GTGCATTACTTCTGGAAACC+GGG 0.556150 4_1:+82070033 Msa0577750:CDS
ATCAAGAAGCTCAAAGGAGA+TGG 0.558476 4_1:+82064740 Msa0577750:CDS
GATGGATATAATGGAAGGCA+AGG 0.559300 4_1:+82067273 Msa0577750:CDS
TCTTTCCAATGGAGCAGGGT+CGG 0.560531 4_1:-82070110 None:intergenic
GGTGCAGTTAAGTTTGAATG+AGG 0.561643 4_1:+82067110 Msa0577750:CDS
AGAAGCCCACGAACGGCTGA+AGG 0.562890 4_1:+82065487 Msa0577750:CDS
GACCAACAGAATGTTGATGC+CGG 0.564290 4_1:-82072458 None:intergenic
ATCTGTATCAAGAAGCTCAA+AGG 0.564701 4_1:+82064734 Msa0577750:CDS
GGTTCCCTTAATGAAGAAGA+TGG 0.565841 4_1:-82068913 None:intergenic
ACCTTTCCAGGAATGTGAGA+TGG 0.568391 4_1:-82070004 None:intergenic
GTTACTTGTTGGCTGTTGCG+GGG 0.569067 4_1:-82064827 None:intergenic
TTACTTGTTGGCTGTTGCGG+GGG 0.569205 4_1:-82064826 None:intergenic
TACAACGAGCATGAAGCTAC+CGG 0.569270 4_1:+82067159 Msa0577750:CDS
ATTCGGTGGTTTGGAATCAC+CGG 0.569274 4_1:-82067178 None:intergenic
TTTATGATGGATATAATGGA+AGG 0.570899 4_1:+82067268 Msa0577750:CDS
GATATAAGTGCAAGTAGTGT+TGG 0.571594 4_1:+82071237 Msa0577750:CDS
TCGGGAAGTAGATGAAGAGA+CGG 0.571607 4_1:+82070381 Msa0577750:CDS
GGAAGGCTCAGTTCTGGACC+TGG 0.571723 4_1:+82066850 Msa0577750:CDS
GGACTATACGCAGAAGAACC+CGG 0.572116 4_1:-82066886 None:intergenic
AGAAAAGGAGTCGGTTTACG+GGG 0.574601 4_1:+82071849 Msa0577750:CDS
CTTCTCTTTCCAATGGAGCA+GGG 0.575366 4_1:-82070114 None:intergenic
GAAACAAATGCTGTTATGAG+TGG 0.575428 4_1:+82071210 Msa0577750:CDS
ATCCATCATAAAATAGCCCC+TGG 0.576549 4_1:-82067257 None:intergenic
GAAGTTACCTCTTATAACAA+TGG 0.577185 4_1:+82067006 Msa0577750:CDS
ACATGTGTTACCAGATGTCA+TGG 0.577892 4_1:-82064245 None:intergenic
ATGTTCACGTGAGTTTCGAA+AGG 0.582903 4_1:-82071295 None:intergenic
GCCTGGCGGAAGAAAAGAGA+TGG 0.583866 4_1:+82065452 Msa0577750:CDS
TGCTGTCAGAAATACAACTC+AGG 0.587231 4_1:+82071128 Msa0577750:CDS
TGTCTCAAGAGTGCTGTCCA+TGG 0.588545 4_1:+82071965 Msa0577750:CDS
CAGCTCATCTGGAGTTCTGG+TGG 0.594570 4_1:-82070137 None:intergenic
ACAGGCCCAGGCAGAATCAG+AGG 0.594590 4_1:-82069918 None:intergenic
ATATTGCTTTCAGTGAGGAT+CGG 0.596772 4_1:+82071082 Msa0577750:CDS
TTTGTGTAGGCTCATGTGAG+AGG 0.599137 4_1:+82071753 Msa0577750:intron
AAGGCTAGCGTTGCTCCCCA+GGG 0.599236 4_1:-82072404 None:intergenic
AAGGGAACCAGTTACGAACC+CGG 0.599640 4_1:+82068927 Msa0577750:CDS
AAAACGTGCAGCCCAATGAA+GGG 0.600218 4_1:-82070533 None:intergenic
TTCTGAGTACTATATGAGCT+AGG 0.601385 4_1:-82066913 None:intergenic
GGACATGATTTCGAGTTGAA+CGG 0.601641 4_1:+82072622 Msa0577750:three_prime_UTR
TTGAACCCTATTCTCAGTTG+CGG 0.604424 4_1:+82070472 Msa0577750:CDS
GCTTCATGCTCGTTGTAGAA+GGG 0.605012 4_1:-82067153 None:intergenic
TCTTTGTCCAAGAAAGAGCA+GGG 0.605633 4_1:+82070409 Msa0577750:CDS
CCTGGCACACAATTGTCACC+GGG 0.606469 4_1:+82066868 Msa0577750:CDS
CCAGTGTAAGAGATGACAGA+TGG 0.610309 4_1:-82070987 None:intergenic
TTATTCCTCTGAGACTACAA+AGG 0.612910 4_1:+82069288 Msa0577750:CDS
AGGGATGATGTGCAAGCAAG+AGG 0.613198 4_1:+82067206 Msa0577750:CDS
CAGTCCACCCATTGACATCA+CGG 0.613503 4_1:-82070510 None:intergenic
CGGGAAGTAGATGAAGAGAC+GGG 0.614610 4_1:+82070382 Msa0577750:CDS
AAAATGGTCTTGAATGCAGT+AGG 0.618258 4_1:+82072601 Msa0577750:three_prime_UTR
CCAAACCACCGAATCATCAA+GGG 0.620745 4_1:+82067187 Msa0577750:CDS
CATATAGTACTCAGAATCCA+GGG 0.621356 4_1:+82066920 Msa0577750:CDS
AGTAACCTTAAAGTCAGCTG+AGG 0.622511 4_1:-82067067 None:intergenic
CCTGTTGAGCTAATTCAGGA+TGG 0.622578 4_1:+82069962 Msa0577750:CDS
CCGAAAACAGAAAGTAGATG+TGG 0.623324 4_1:+82071929 Msa0577750:CDS
CTGTAGGAGAAGCCCACGAA+CGG 0.626185 4_1:+82065480 Msa0577750:CDS
TGATCATGATGTGGAAGTGA+TGG 0.631329 4_1:+82072555 Msa0577750:three_prime_UTR
GCGGGCATAAGGGACTGGCA+GGG 0.631483 4_1:+82070938 Msa0577750:CDS
GGCAGTTGGAATCTTGGACA+AGG 0.634216 4_1:+82071809 Msa0577750:CDS
ACTGGCAGGGTATCTTTCTG+AGG 0.634962 4_1:+82070951 Msa0577750:CDS
AATGGAATGACTTACTCAGA+AGG 0.637909 4_1:+82067024 Msa0577750:CDS
CAGGCCCAGGCAGAATCAGA+GGG 0.639349 4_1:-82069917 None:intergenic
ATACAACTCAGGCAGCTGCA+CGG 0.642481 4_1:+82071139 Msa0577750:CDS
GTACTATATGAGCTAGGACT+CGG 0.643924 4_1:-82066907 None:intergenic
CTCTCTGGACCAGATAACCA+GGG 0.644821 4_1:+82067240 Msa0577750:CDS
AGAGCAGGGGATTATTCACA+TGG 0.645001 4_1:+82070423 Msa0577750:CDS
GTATATTGGTGATCATGATG+TGG 0.646907 4_1:+82072546 Msa0577750:three_prime_UTR
AGCTAAGGTATCTTTGAGTG+AGG 0.652018 4_1:-82071106 None:intergenic
TCAATTCAGAAGAAATATCG+AGG 0.658574 4_1:+82071333 Msa0577750:CDS
TGAGAAGTATCGTCAAGCCA+AGG 0.663944 4_1:+82072028 Msa0577750:CDS
ATAAATTGTTACTATGCACA+TGG 0.664247 4_1:+82066080 Msa0577750:CDS
ACAAACCTTTGTAGTCTCAG+AGG 0.664931 4_1:-82069293 None:intergenic
CTTTGTCCAAGAAAGAGCAG+GGG 0.667079 4_1:+82070410 Msa0577750:CDS
GGAAAATATTGCTTTCAGTG+AGG 0.667748 4_1:+82071077 Msa0577750:CDS
AGAACCCTACTTTCCAGAGG+CGG 0.671098 4_1:+82066108 Msa0577750:CDS
ATTTCCGTGATGTCAATGGG+TGG 0.671605 4_1:+82070506 Msa0577750:CDS
GTGACTTCATCAACACCTTG+AGG 0.672304 4_1:-82069100 None:intergenic
TGAGCTATCTAAAAGTTCTG+CGG 0.677458 4_1:+82071017 Msa0577750:CDS
AAGGCAGTCTCCCCAGAATG+GGG 0.679096 4_1:+82069265 Msa0577750:CDS
AGCAGAACCCTACTTTCCAG+AGG 0.679127 4_1:+82066105 Msa0577750:CDS
ATCTGGTCCAGAGAGAGCTG+TGG 0.680189 4_1:-82067232 None:intergenic
GGAAAGATGGTCATGCCTGG+CGG 0.682808 4_1:+82065438 Msa0577750:CDS
AGATGGCGGAGAAAAGGAGT+CGG 0.685188 4_1:+82071840 Msa0577750:CDS
TTCATAGGCGTCATAAACAA+CGG 0.687883 4_1:-82066950 None:intergenic
AGAGGAATAACCCCATTCTG+GGG 0.688939 4_1:-82069275 None:intergenic
ACAAGGTTGTGCTAAGATGG+CGG 0.689666 4_1:+82071826 Msa0577750:CDS
AGCATCAGGAGATTTGACCA+TGG 0.713604 4_1:-82071982 None:intergenic
TCATCCATAGAAGAATATGG+AGG 0.715779 4_1:-82069127 None:intergenic
TCTCTGGACCAGATAACCAG+GGG 0.716297 4_1:+82067241 Msa0577750:CDS
TAAAGGATAAGCTACAGGCG+TGG 0.717250 4_1:+82070344 Msa0577750:CDS
AGATCCAATTGGTAAAACTG+CGG 0.717630 4_1:+82070897 Msa0577750:CDS
TGTAATGAACGAGAACAATG+TGG 0.718490 4_1:-82066415 None:intergenic
TCATTACAGAGACACAAGTG+AGG 0.732114 4_1:+82066430 Msa0577750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTAGTATATAAGAATA+TGG - chr4_1:82066691-82066710 None:intergenic 10.0%
!! TTTATAAATAAGAGTTTAAT+TGG + chr4_1:82069526-82069545 Msa0577750:intron 10.0%
!!! AGTTTATTTATTTATTTTTG+GGG + chr4_1:82070590-82070609 Msa0577750:intron 10.0%
!!! ATATCAAGAATATTTTAAAA+GGG - chr4_1:82070776-82070795 None:intergenic 10.0%
!!! AATATCAAGAATATTTTAAA+AGG - chr4_1:82070777-82070796 None:intergenic 10.0%
!! TTTACTCTTTATACTTAATT+TGG + chr4_1:82064308-82064327 Msa0577750:intron 15.0%
!! TAAATTGTTGAAAATTCTAA+TGG - chr4_1:82064530-82064549 None:intergenic 15.0%
!!! TAGAAAAAGTTTATTTCTTA+GGG + chr4_1:82064566-82064585 Msa0577750:intron 15.0%
!!! TTTTTAATTTTAATAACCCA+GGG - chr4_1:82065656-82065675 None:intergenic 15.0%
!!! ATTTTTAATTTTAATAACCC+AGG - chr4_1:82065657-82065676 None:intergenic 15.0%
!! AAAATAATAAATTATCCATC+TGG + chr4_1:82065837-82065856 Msa0577750:intron 15.0%
!! GTTGGAAAAAATAATAAAAA+AGG + chr4_1:82067620-82067639 Msa0577750:intron 15.0%
!! ATTAAACAAGAAAAATACTA+AGG + chr4_1:82068024-82068043 Msa0577750:intron 15.0%
!! AAAAAACTGTTAAATTGATA+AGG - chr4_1:82069014-82069033 None:intergenic 15.0%
!!! ATCAATTTAACAGTTTTTTT+TGG + chr4_1:82069015-82069034 Msa0577750:intron 15.0%
!! AAAACAGAAATTTACTATTA+AGG + chr4_1:82069246-82069265 Msa0577750:CDS 15.0%
!! AAATCTATATAAAATTGGTT+TGG + chr4_1:82069472-82069491 Msa0577750:intron 15.0%
!! AATTAAATCCATAAATAATC+AGG + chr4_1:82069714-82069733 Msa0577750:intron 15.0%
!! TTTCTTATCTTAAAATGATT+TGG + chr4_1:82069811-82069830 Msa0577750:intron 15.0%
!!! AAATGTCTTTTAAATAATTC+AGG - chr4_1:82070737-82070756 None:intergenic 15.0%
!!! TAAAAGACATTTTCATAATT+TGG + chr4_1:82070745-82070764 Msa0577750:intron 15.0%
!!! TATTTCTAATTTATTTGTGT+AGG + chr4_1:82071740-82071759 Msa0577750:intron 15.0%
!!! GAAATCTTTTGATTATATTT+TGG + chr4_1:82072077-82072096 Msa0577750:intron 15.0%
!!! TTTTGTTACAATGTATAAAT+TGG + chr4_1:82072280-82072299 Msa0577750:intron 15.0%
!! AATCTTTGTAAAGTATAAAA+TGG + chr4_1:82072585-82072604 Msa0577750:three_prime_UTR 15.0%
!! ATGAATGAAATGAAATCAAA+AGG - chr4_1:82064198-82064217 None:intergenic 20.0%
!!! GTAGAAAAAGTTTATTTCTT+AGG + chr4_1:82064565-82064584 Msa0577750:intron 20.0%
!! TAGTTAGTTAGTTAGTTATT+TGG + chr4_1:82064926-82064945 Msa0577750:intron 20.0%
!! TACTTGTATACTTGTATATA+AGG + chr4_1:82064975-82064994 Msa0577750:intron 20.0%
!!! GTTTGACTTAATTTTATCTT+TGG - chr4_1:82065114-82065133 None:intergenic 20.0%
!! TCATATTATACATGTAAAAG+AGG + chr4_1:82065612-82065631 Msa0577750:intron 20.0%
!! CATATTATACATGTAAAAGA+GGG + chr4_1:82065613-82065632 Msa0577750:intron 20.0%
!!! TTTTAATTTTAATAACCCAG+GGG - chr4_1:82065655-82065674 None:intergenic 20.0%
!! AAAACATAATTCACTTTCTA+TGG + chr4_1:82065931-82065950 Msa0577750:intron 20.0%
!! TTTAAAGGATATACAACATA+TGG - chr4_1:82066211-82066230 None:intergenic 20.0%
!!! ATATTGTATGTTCGTTTTAA+AGG - chr4_1:82066226-82066245 None:intergenic 20.0%
!!! AAATGAATTGCAAAGATTTT+AGG + chr4_1:82066287-82066306 Msa0577750:intron 20.0%
!! ATTAAACCATATTACACAAA+TGG - chr4_1:82066545-82066564 None:intergenic 20.0%
!! TGATTACAATTTAACAAATC+AGG - chr4_1:82066664-82066683 None:intergenic 20.0%
!!! CTATTTTATGATGGATATAA+TGG + chr4_1:82067264-82067283 Msa0577750:CDS 20.0%
!! ATTTAATCAGTGAAATATCT+GGG + chr4_1:82067340-82067359 Msa0577750:intron 20.0%
!! GCAAATAAGAAGATTTATTA+TGG - chr4_1:82067518-82067537 None:intergenic 20.0%
!! AAGATTTACATGTAAAAAAG+TGG + chr4_1:82067713-82067732 Msa0577750:intron 20.0%
!! TCAAATTATGAAAGAAGATA+TGG - chr4_1:82068546-82068565 None:intergenic 20.0%
!! TAAAATTTGATACTTAAAGC+AGG + chr4_1:82068882-82068901 Msa0577750:intron 20.0%
!!! TATAGATTGTAAAGATTTTC+AGG - chr4_1:82069439-82069458 None:intergenic 20.0%
!!! ATTTTATATAGATTTCCACT+AGG - chr4_1:82069467-82069486 None:intergenic 20.0%
!! AGTGGAAATCTATATAAAAT+TGG + chr4_1:82069467-82069486 Msa0577750:intron 20.0%
!!! CTCTTATTTATAAATAGCAT+GGG - chr4_1:82069520-82069539 None:intergenic 20.0%
!!! ACTCTTATTTATAAATAGCA+TGG - chr4_1:82069521-82069540 None:intergenic 20.0%
!! GTCAATTTAGGAATTTAATA+CGG + chr4_1:82069619-82069638 Msa0577750:intron 20.0%
!!! TGTTATTACTTGTTAGATTT+GGG + chr4_1:82070158-82070177 Msa0577750:CDS 20.0%
!!! TTTTCAGTAAACAAAAATGT+TGG + chr4_1:82070658-82070677 Msa0577750:intron 20.0%
!!! AAGAATATTTTAAAAGGGAT+CGG - chr4_1:82070771-82070790 None:intergenic 20.0%
!!! TGTAGAAGATTTTTTAAACA+TGG + chr4_1:82072361-82072380 Msa0577750:CDS 20.0%
!!! ATGATTTTTATTAATATCCC+TGG + chr4_1:82072387-82072406 Msa0577750:exon 20.0%
!!! TGATTTTTATTAATATCCCT+GGG + chr4_1:82072388-82072407 Msa0577750:exon 20.0%
!! AAAGTAGATTGTATGTATAT+TGG + chr4_1:82072532-82072551 Msa0577750:three_prime_UTR 20.0%
!!! TTGGTTTTTTTGCTTTGAAT+TGG + chr4_1:82064367-82064386 Msa0577750:intron 25.0%
!!! TGGTTTTTTTGCTTTGAATT+GGG + chr4_1:82064368-82064387 Msa0577750:intron 25.0%
! TGGTTTATGATAATAGTAGT+TGG - chr4_1:82064510-82064529 None:intergenic 25.0%
! TATGACAAAAAATCTTGGAA+AGG + chr4_1:82064621-82064640 Msa0577750:intron 25.0%
! TGTGGGAAAATAAAAATGAT+AGG + chr4_1:82064644-82064663 Msa0577750:intron 25.0%
! GGAAAATAAAAATGATAGGA+AGG + chr4_1:82064648-82064667 Msa0577750:intron 25.0%
!! ACAGTTATAACTTTTAACAC+AGG - chr4_1:82064866-82064885 None:intergenic 25.0%
! TATACAAGTAAAAAGCTACA+AGG - chr4_1:82064965-82064984 None:intergenic 25.0%
! CATAAAAATAGCTTATACGT+TGG - chr4_1:82065090-82065109 None:intergenic 25.0%
! TGCATGTTAACATTATCAAT+TGG + chr4_1:82065358-82065377 Msa0577750:intron 25.0%
! TTATACGTTGTTCATGAAAA+AGG + chr4_1:82065537-82065556 Msa0577750:intron 25.0%
! TATAACTACAAAACAGGAAT+TGG - chr4_1:82065892-82065911 None:intergenic 25.0%
! AAGTACTATAACTACAAAAC+AGG - chr4_1:82065898-82065917 None:intergenic 25.0%
!! GTGAATTATGTTTTCAAAAC+AGG - chr4_1:82065925-82065944 None:intergenic 25.0%
! ATGTGCATAGTAACAATTTA+TGG - chr4_1:82066081-82066100 None:intergenic 25.0%
! ATAAATTGTTACTATGCACA+TGG + chr4_1:82066080-82066099 Msa0577750:CDS 25.0%
!! TAATAAGCTTGATAGTATGA+AGG - chr4_1:82066188-82066207 None:intergenic 25.0%
! GATCAAATTATGTATGTTGA+TGG - chr4_1:82066330-82066349 None:intergenic 25.0%
! GTACTATTATTATGCTTATC+TGG - chr4_1:82066476-82066495 None:intergenic 25.0%
! TAACTAATGAAGAACATGAT+AGG - chr4_1:82066570-82066589 None:intergenic 25.0%
! GAAAAGATATAAACAGCTTA+TGG - chr4_1:82066741-82066760 None:intergenic 25.0%
!!! TTTATGATGGATATAATGGA+AGG + chr4_1:82067268-82067287 Msa0577750:CDS 25.0%
! CATTTAATCAGTGAAATATC+TGG + chr4_1:82067339-82067358 Msa0577750:intron 25.0%
! TAAAAGAAAGTCGTCTATAA+GGG - chr4_1:82067384-82067403 None:intergenic 25.0%
! CTTTCATACATTATGTAACA+AGG - chr4_1:82067768-82067787 None:intergenic 25.0%
!! AGATTATTTTCCCTATTTCA+TGG + chr4_1:82067786-82067805 Msa0577750:intron 25.0%
! AAAACTCAATTTGAGAGAAA+AGG + chr4_1:82067911-82067930 Msa0577750:intron 25.0%
! TTTAATTAGAGTCCTAATTC+AGG - chr4_1:82068010-82068029 None:intergenic 25.0%
! CAAGAAAAATACTAAGGTTA+AGG + chr4_1:82068030-82068049 Msa0577750:intron 25.0%
! TACAAAAAAAGCCACTAATA+AGG + chr4_1:82068236-82068255 Msa0577750:intron 25.0%
!!! CATTTTTTAAGCCTTATTAG+TGG - chr4_1:82068250-82068269 None:intergenic 25.0%
! CACTAATAAGGCTTAAAAAA+TGG + chr4_1:82068248-82068267 Msa0577750:intron 25.0%
!!! AAGGCTTAAAAAATGGATTT+TGG + chr4_1:82068255-82068274 Msa0577750:intron 25.0%
!!! AGGCTTAAAAAATGGATTTT+GGG + chr4_1:82068256-82068275 Msa0577750:intron 25.0%
! GCTTTACATTGATATTGTAT+AGG + chr4_1:82068336-82068355 Msa0577750:intron 25.0%
!! TTATGAAATTGTTGTGGTTT+TGG + chr4_1:82068469-82068488 Msa0577750:intron 25.0%
!!! TGAAAAAACTAACTAGCTTT+AGG - chr4_1:82068512-82068531 None:intergenic 25.0%
!!! GATGTTTAATTTTAACGAAG+AGG - chr4_1:82068609-82068628 None:intergenic 25.0%
! AGATCTGAATAAACGTAAAT+TGG - chr4_1:82068828-82068847 None:intergenic 25.0%
!!! CAGTTTTTTTTGGCTTATTT+TGG + chr4_1:82069025-82069044 Msa0577750:intron 25.0%
! AATCCATAAATAATCAGGTT+AGG + chr4_1:82069719-82069738 Msa0577750:intron 25.0%
! TATCCTAACCTGATTATTTA+TGG - chr4_1:82069725-82069744 None:intergenic 25.0%
! ACATTTAAGCTTAACTAGTT+TGG + chr4_1:82069770-82069789 Msa0577750:intron 25.0%
!! CTGTTATTACTTGTTAGATT+TGG + chr4_1:82070157-82070176 Msa0577750:CDS 25.0%
! AAGTAATGATAACAACGAAT+CGG + chr4_1:82070207-82070226 Msa0577750:CDS 25.0%
!! GATGTTGATATTTTCATTCA+AGG + chr4_1:82070616-82070635 Msa0577750:intron 25.0%
! GATCACATTCATTTAGAAAA+CGG + chr4_1:82071178-82071197 Msa0577750:CDS 25.0%
!! TCTCATCATTTCAATTTTTC+AGG - chr4_1:82071441-82071460 None:intergenic 25.0%
! ATTTGTGAACAGAAATTAAG+AGG + chr4_1:82071532-82071551 Msa0577750:intron 25.0%
! AGAAATTAAGAGGATCTATA+AGG + chr4_1:82071542-82071561 Msa0577750:intron 25.0%
! TGAAAAATGCTAGTATAGTT+AGG - chr4_1:82071643-82071662 None:intergenic 25.0%
! ATGAAGAGAGAAACAATTAT+AGG + chr4_1:82071672-82071691 Msa0577750:intron 25.0%
!! TTTGATAATAATGCAGTTGA+AGG - chr4_1:82071713-82071732 None:intergenic 25.0%
!! GAAGCATTACAAAGTATTAT+GGG + chr4_1:82071788-82071807 Msa0577750:CDS 25.0%
! AATCAAATGCTAAAGAAAAG+AGG - chr4_1:82072112-82072131 None:intergenic 25.0%
!! CATCATCAATTTTTATAGGA+TGG - chr4_1:82072140-82072159 None:intergenic 25.0%
! AAAACATTTGATTATGTGAG+TGG - chr4_1:82072165-82072184 None:intergenic 25.0%
! AAATGGTTTATAGATCTTCA+TGG - chr4_1:82072235-82072254 None:intergenic 25.0%
! ATGACAATGTAAAGTCAAAA+TGG - chr4_1:82072252-82072271 None:intergenic 25.0%
! ACAAACAAGTGAAGAAAAAT+CGG + chr4_1:82072328-82072347 Msa0577750:CDS 25.0%
!! GATTTTTATTAATATCCCTG+GGG + chr4_1:82072389-82072408 Msa0577750:exon 25.0%
! CAATAGAGTTGAAATTAGTA+AGG - chr4_1:82072426-82072445 None:intergenic 25.0%
GTGAAACAGTAGAATTGATT+TGG - chr4_1:82064157-82064176 None:intergenic 30.0%
AGAAGAAGAGTAATTGAATC+TGG - chr4_1:82064224-82064243 None:intergenic 30.0%
!!! GGTTTTTTTGCTTTGAATTG+GGG + chr4_1:82064369-82064388 Msa0577750:intron 30.0%
GCTACTATGACAAAAAATCT+TGG + chr4_1:82064616-82064635 Msa0577750:intron 30.0%
! AAAAAATCTTGGAAAGGTGT+GGG + chr4_1:82064627-82064646 Msa0577750:intron 30.0%
ACAATTATTATTGTTGCCTC+AGG + chr4_1:82064691-82064710 Msa0577750:intron 30.0%
GATATCATATTCATAACCTG+AGG - chr4_1:82064710-82064729 None:intergenic 30.0%
! GAGTTAAAGATGTTACTTGT+TGG - chr4_1:82064841-82064860 None:intergenic 30.0%
ATAACTGTTAGATGTTAGCT+AGG + chr4_1:82064878-82064897 Msa0577750:intron 30.0%
TAAGTAGCTTATCCAAAACA+GGG - chr4_1:82065029-82065048 None:intergenic 30.0%
TTAAGTAGCTTATCCAAAAC+AGG - chr4_1:82065030-82065049 None:intergenic 30.0%
! TTTTCGGCTTATAGCTTATA+TGG - chr4_1:82065142-82065161 None:intergenic 30.0%
AATGAATCTATTCCTCTCAA+CGG - chr4_1:82065265-82065284 None:intergenic 30.0%
! AGTCACTCTAAGAAACAAAA+AGG - chr4_1:82065327-82065346 None:intergenic 30.0%
!! TATCAATTGGTCTTCTAAAC+AGG + chr4_1:82065371-82065390 Msa0577750:intron 30.0%
GAAAAAGGAAAATTTATCCG+CGG + chr4_1:82065552-82065571 Msa0577750:intron 30.0%
AAGCATCTTGAAAGTTGAAA+GGG - chr4_1:82065812-82065831 None:intergenic 30.0%
! AAAGCATCTTGAAAGTTGAA+AGG - chr4_1:82065813-82065832 None:intergenic 30.0%
! ATGGCTATATTCATGACTTT+TGG + chr4_1:82065950-82065969 Msa0577750:intron 30.0%
! CAAATTATGTATGTTGATGG+TGG - chr4_1:82066327-82066346 None:intergenic 30.0%
AGGAATCCATTTGTGTAATA+TGG + chr4_1:82066536-82066555 Msa0577750:intron 30.0%
!! GCTTATGGATGGATTATTAA+AGG - chr4_1:82066726-82066745 None:intergenic 30.0%
AGATATAAACAGCTTATGGA+TGG - chr4_1:82066737-82066756 None:intergenic 30.0%
! TTCTTAAGCTTGTTCTTGTA+TGG + chr4_1:82066758-82066777 Msa0577750:intron 30.0%
GAAGTTACCTCTTATAACAA+TGG + chr4_1:82067006-82067025 Msa0577750:CDS 30.0%
AGTCATTCCATTGTTATAAG+AGG - chr4_1:82067016-82067035 None:intergenic 30.0%
GTAAAAGAAAGTCGTCTATA+AGG - chr4_1:82067385-82067404 None:intergenic 30.0%
AGTATTCTGTAATTGTCGAT+TGG + chr4_1:82067446-82067465 Msa0577750:intron 30.0%
ACAACCAGCATATAACAATT+GGG - chr4_1:82067580-82067599 None:intergenic 30.0%
AACAACCAGCATATAACAAT+TGG - chr4_1:82067581-82067600 None:intergenic 30.0%
!! GGTTGTTTTGTGTGAATAAA+AGG + chr4_1:82067594-82067613 Msa0577750:intron 30.0%
TGTGTGAATAAAAGGAATGT+TGG + chr4_1:82067602-82067621 Msa0577750:intron 30.0%
AAAAGTGGAACAGTCTTTAA+AGG + chr4_1:82067728-82067747 Msa0577750:intron 30.0%
ATGTAACAAGGAATTTCCTA+TGG - chr4_1:82067756-82067775 None:intergenic 30.0%
TACTTGACAACCATGAAATA+GGG - chr4_1:82067799-82067818 None:intergenic 30.0%
TTACTTGACAACCATGAAAT+AGG - chr4_1:82067800-82067819 None:intergenic 30.0%
TTGTCTTGAAACATTTCATG+TGG + chr4_1:82067831-82067850 Msa0577750:intron 30.0%
AACAGTGTTACATGGTTATA+GGG + chr4_1:82067964-82067983 Msa0577750:intron 30.0%
ATGGATTTCAGGCTTAAAAA+AGG + chr4_1:82068103-82068122 Msa0577750:intron 30.0%
! TATTTTCCTCGTTTAATCAG+AGG - chr4_1:82068218-82068237 None:intergenic 30.0%
CAATTTCATAAGCAAACCTT+TGG - chr4_1:82068460-82068479 None:intergenic 30.0%
GTTTGCTTATGAAATTGTTG+TGG + chr4_1:82068463-82068482 Msa0577750:intron 30.0%
!! AACTAGCTTTAGGAGAAAAT+TGG - chr4_1:82068502-82068521 None:intergenic 30.0%
AAAGAAGATATGGTTTACAG+TGG - chr4_1:82068536-82068555 None:intergenic 30.0%
GAGACTATAAATGCTAAAAG+TGG + chr4_1:82068643-82068662 Msa0577750:intron 30.0%
AAAGTGGTGTATATTCTTGT+AGG + chr4_1:82068659-82068678 Msa0577750:intron 30.0%
TATATTCTTGTAGGTGATAG+TGG + chr4_1:82068668-82068687 Msa0577750:intron 30.0%
TTCACCATCTTCTTCATTAA+GGG + chr4_1:82068909-82068928 Msa0577750:CDS 30.0%
! AATTTCAACACTGATAATGC+TGG + chr4_1:82068967-82068986 Msa0577750:CDS 30.0%
GTTTCATCCATAGAAGAATA+TGG - chr4_1:82069133-82069152 None:intergenic 30.0%
ACAATCTATATATGACCTAG+TGG + chr4_1:82069449-82069468 Msa0577750:intron 30.0%
GATATTTGAGGAGTCAATTT+AGG + chr4_1:82069607-82069626 Msa0577750:intron 30.0%
! TATGCACAGGTTTTCATTAT+TGG + chr4_1:82069878-82069897 Msa0577750:intron 30.0%
! ATGCACAGGTTTTCATTATT+GGG + chr4_1:82069879-82069898 Msa0577750:intron 30.0%
AGTAATGATAACAACGAATC+GGG + chr4_1:82070208-82070227 Msa0577750:CDS 30.0%
! GGGAATTTTCATAAAACAGA+AGG + chr4_1:82070228-82070247 Msa0577750:CDS 30.0%
ATAGTAGAGCCTCTATAATA+TGG - chr4_1:82070273-82070292 None:intergenic 30.0%
ATTATAGAGGCTCTACTATT+TGG + chr4_1:82070274-82070293 Msa0577750:CDS 30.0%
ATTCTTCTGGTACTATCAAT+TGG + chr4_1:82070305-82070324 Msa0577750:CDS 30.0%
ATAAATTTCCGTGATGTCAA+TGG + chr4_1:82070502-82070521 Msa0577750:CDS 30.0%
TAAATTTCCGTGATGTCAAT+GGG + chr4_1:82070503-82070522 Msa0577750:CDS 30.0%
!! AAGTGTTTGTTATTCCATAC+AGG + chr4_1:82070806-82070825 Msa0577750:intron 30.0%
!! AGTGTTTGTTATTCCATACA+GGG + chr4_1:82070807-82070826 Msa0577750:intron 30.0%
TATTCCATACAGGGAAAAAA+TGG + chr4_1:82070816-82070835 Msa0577750:intron 30.0%
! ACTGAAAGCAATATTTTCCT+TGG - chr4_1:82071076-82071095 None:intergenic 30.0%
TCAATTCAGAAGAAATATCG+AGG + chr4_1:82071333-82071352 Msa0577750:CDS 30.0%
TTGAAATGATGAGAGCTATA+TGG + chr4_1:82071447-82071466 Msa0577750:intron 30.0%
!! GGAAGCATTACAAAGTATTA+TGG + chr4_1:82071787-82071806 Msa0577750:CDS 30.0%
AGTAGATGTGGAAATTGAAA+AGG + chr4_1:82071941-82071960 Msa0577750:CDS 30.0%
! GGCACATCATCAATTTTTAT+AGG - chr4_1:82072144-82072163 None:intergenic 30.0%
TCTATTGCATTATCAGTTTC+CGG + chr4_1:82072439-82072458 Msa0577750:three_prime_UTR 30.0%
AAAGAAAGAGACAAGAGAGT+TGG - chr4_1:82064102-82064121 None:intergenic 35.0%
AAAAACCAAGTCAAGTGATG+TGG - chr4_1:82064356-82064375 None:intergenic 35.0%
CGTGATTTACAAAACCATGA+TGG - chr4_1:82064396-82064415 None:intergenic 35.0%
TTTCTTAGGGTGTAGAAAAG+AGG + chr4_1:82064579-82064598 Msa0577750:intron 35.0%
CAAAAAATCTTGGAAAGGTG+TGG + chr4_1:82064626-82064645 Msa0577750:intron 35.0%
ATCTGTATCAAGAAGCTCAA+AGG + chr4_1:82064734-82064753 Msa0577750:CDS 35.0%
AAAATGTACATCACTTCTGC+AGG - chr4_1:82064772-82064791 None:intergenic 35.0%
GTTGGCACTTATATGATAAG+CGG - chr4_1:82065072-82065091 None:intergenic 35.0%
ATAAGCCGAAAAACAGCTTA+TGG + chr4_1:82065150-82065169 Msa0577750:intron 35.0%
!!! CATGTCCATAAGCTGTTTTT+CGG - chr4_1:82065158-82065177 None:intergenic 35.0%
TGTCACAAGCAGTTTCTATA+AGG + chr4_1:82065176-82065195 Msa0577750:intron 35.0%
!! GAAGAGTATTACGTTTCTTC+CGG + chr4_1:82065417-82065436 Msa0577750:CDS 35.0%
TATAAAATTCATAGCACCCC+TGG + chr4_1:82065636-82065655 Msa0577750:intron 35.0%
ATAAAATTCATAGCACCCCT+GGG + chr4_1:82065637-82065656 Msa0577750:intron 35.0%
! TAAAAAGCGTAATTGCCAGA+TGG - chr4_1:82065855-82065874 None:intergenic 35.0%
!!! GGTCAACATTTGTTTTGCAA+TGG + chr4_1:82065971-82065990 Msa0577750:intron 35.0%
ACAACTGCTACAATAACACA+TGG - chr4_1:82066355-82066374 None:intergenic 35.0%
TGTAATGAACGAGAACAATG+TGG - chr4_1:82066418-82066437 None:intergenic 35.0%
ATGTCCCTACAGAAAAACTT+CGG + chr4_1:82066511-82066530 Msa0577750:intron 35.0%
! CTTTCCGAAGTTTTTCTGTA+GGG - chr4_1:82066518-82066537 None:intergenic 35.0%
CACGTGAGTACAAATAAACA+CGG - chr4_1:82066824-82066843 None:intergenic 35.0%
TATTTGTACTCACGTGTTGT+AGG + chr4_1:82066828-82066847 Msa0577750:intron 35.0%
ATTTGTACTCACGTGTTGTA+GGG + chr4_1:82066829-82066848 Msa0577750:intron 35.0%
TTCTGAGTACTATATGAGCT+AGG - chr4_1:82066916-82066935 None:intergenic 35.0%
TCATATAGTACTCAGAATCC+AGG + chr4_1:82066919-82066938 Msa0577750:CDS 35.0%
CATATAGTACTCAGAATCCA+GGG + chr4_1:82066920-82066939 Msa0577750:CDS 35.0%
TTCATAGGCGTCATAAACAA+CGG - chr4_1:82066953-82066972 None:intergenic 35.0%
AATGGAATGACTTACTCAGA+AGG + chr4_1:82067024-82067043 Msa0577750:CDS 35.0%
ATTACAGAATACTATCCGTG+CGG - chr4_1:82067439-82067458 None:intergenic 35.0%
! CAAGAGAATTTTACCACAGA+AGG - chr4_1:82067543-82067562 None:intergenic 35.0%
CATATAACAATTGGGGAATC+AGG - chr4_1:82067572-82067591 None:intergenic 35.0%
ATTCCCCAATTGTTATATGC+TGG + chr4_1:82067573-82067592 Msa0577750:intron 35.0%
CAACCAGCATATAACAATTG+GGG - chr4_1:82067579-82067598 None:intergenic 35.0%
! ACAGTCTTTAAAGGTTCCAT+AGG + chr4_1:82067737-82067756 Msa0577750:intron 35.0%
! CTAGTCTTCATATGACTCAT+CGG - chr4_1:82067857-82067876 None:intergenic 35.0%
TTGCAAAGAACAGTGTTACA+TGG + chr4_1:82067956-82067975 Msa0577750:intron 35.0%
GAACAGTGTTACATGGTTAT+AGG + chr4_1:82067963-82067982 Msa0577750:intron 35.0%
! ATGCTTAAGCAATGGATTTC+AGG + chr4_1:82068092-82068111 Msa0577750:intron 35.0%
CAACAGGAGTTTACATGATT+GGG - chr4_1:82068293-82068312 None:intergenic 35.0%
TGGGCTTAAGTGAAGTTATA+CGG - chr4_1:82068362-82068381 None:intergenic 35.0%
TTAAGCCCATTCAACATCAT+TGG + chr4_1:82068373-82068392 Msa0577750:intron 35.0%
TAAACATCAACTGCTAAGAG+AGG + chr4_1:82068621-82068640 Msa0577750:intron 35.0%
TTTCCCTGATGGAAATGAAA+AGG + chr4_1:82068721-82068740 Msa0577750:CDS 35.0%
GAAATGAAAAGGCTCTATCA+TGG + chr4_1:82068732-82068751 Msa0577750:CDS 35.0%
AAAAATGTATACATGCCAGC+AGG + chr4_1:82068755-82068774 Msa0577750:CDS 35.0%
GTTCACCATCTTCTTCATTA+AGG + chr4_1:82068908-82068927 Msa0577750:CDS 35.0%
! TTTGTCCAGCAATAGTTTTC+CGG - chr4_1:82068949-82068968 None:intergenic 35.0%
ACTTCCTCCATATTCTTCTA+TGG + chr4_1:82069123-82069142 Msa0577750:CDS 35.0%
TCATCCATAGAAGAATATGG+AGG - chr4_1:82069130-82069149 None:intergenic 35.0%
TTGTTTGACCAAAGCCAAAT+TGG + chr4_1:82069184-82069203 Msa0577750:CDS 35.0%
!! TTATTCCTCTGAGACTACAA+AGG + chr4_1:82069288-82069307 Msa0577750:CDS 35.0%
! ACAAAGGTTTGTTCCTTTCT+AGG + chr4_1:82069304-82069323 Msa0577750:intron 35.0%
CAGTCAGAAATCATAGTGTA+AGG - chr4_1:82069345-82069364 None:intergenic 35.0%
CTTACACTATGATTTCTGAC+TGG + chr4_1:82069343-82069362 Msa0577750:intron 35.0%
!! GTAAAGATTTTCAGGAACCT+AGG - chr4_1:82069431-82069450 None:intergenic 35.0%
TTTCACCGCATAGATATTTG+AGG + chr4_1:82069595-82069614 Msa0577750:intron 35.0%
TGACTCCTCAAATATCTATG+CGG - chr4_1:82069603-82069622 None:intergenic 35.0%
ACAAGTAATAACAGCTCATC+TGG - chr4_1:82070151-82070170 None:intergenic 35.0%
TTCATGGAGCCATATTATAG+AGG + chr4_1:82070261-82070280 Msa0577750:CDS 35.0%
TTTGGCAGTGAAAATTCTTC+TGG + chr4_1:82070292-82070311 Msa0577750:CDS 35.0%
AGATCCAATTGGTAAAACTG+CGG + chr4_1:82070897-82070916 Msa0577750:CDS 35.0%
TGAGCTATCTAAAAGTTCTG+CGG + chr4_1:82071017-82071036 Msa0577750:CDS 35.0%
AACTGTTAGTAATGTCTCCA+AGG + chr4_1:82071056-82071075 Msa0577750:CDS 35.0%
GGAAAATATTGCTTTCAGTG+AGG + chr4_1:82071077-82071096 Msa0577750:CDS 35.0%
ATATTGCTTTCAGTGAGGAT+CGG + chr4_1:82071082-82071101 Msa0577750:CDS 35.0%
GAAACAAATGCTGTTATGAG+TGG + chr4_1:82071210-82071229 Msa0577750:CDS 35.0%
GATATAAGTGCAAGTAGTGT+TGG + chr4_1:82071237-82071256 Msa0577750:CDS 35.0%
TTCAGAAGAAATATCGAGGT+TGG + chr4_1:82071337-82071356 Msa0577750:CDS 35.0%
AAGAAATATCGAGGTTGGAA+AGG + chr4_1:82071342-82071361 Msa0577750:CDS 35.0%
!! CCTGTATCTTCACTACTTTT+TGG - chr4_1:82071392-82071411 None:intergenic 35.0%
CCAAAAAGTAGTGAAGATAC+AGG + chr4_1:82071389-82071408 Msa0577750:CDS 35.0%
AGTAGTGAAGATACAGGTAA+TGG + chr4_1:82071395-82071414 Msa0577750:intron 35.0%
CTTTGTAATGCTTCCTAACT+TGG - chr4_1:82071782-82071801 None:intergenic 35.0%
! TACAAAGTATTATGGGCAGT+TGG + chr4_1:82071795-82071814 Msa0577750:CDS 35.0%
! CCACATCTACTTTCTGTTTT+CGG - chr4_1:82071932-82071951 None:intergenic 35.0%
! TTTTGCATGATGCTTCCATA+GGG + chr4_1:82072181-82072200 Msa0577750:intron 35.0%
TCACAGTATAAAATGCCCTA+TGG - chr4_1:82072199-82072218 None:intergenic 35.0%
! GCATTTTATACTGTGAGAGT+CGG + chr4_1:82072203-82072222 Msa0577750:intron 35.0%
! TAAATTGGCAACTCTTTTGC+AGG + chr4_1:82072295-82072314 Msa0577750:intron 35.0%
TTCACTTGTTTGTGCAAGTT+CGG - chr4_1:82072321-82072340 None:intergenic 35.0%
! GTATATTGGTGATCATGATG+TGG + chr4_1:82072546-82072565 Msa0577750:three_prime_UTR 35.0%
! AAAATGGTCTTGAATGCAGT+AGG + chr4_1:82072601-82072620 Msa0577750:three_prime_UTR 35.0%
TAAACAAACACGCGTAGAGA+TGG - chr4_1:82064133-82064152 None:intergenic 40.0%
!!! CAAAAGGCAGAGAGCATTTT+TGG - chr4_1:82064182-82064201 None:intergenic 40.0%
TCTTCTTCTACCATGACATC+TGG + chr4_1:82064235-82064254 Msa0577750:exon 40.0%
ACATGTGTTACCAGATGTCA+TGG - chr4_1:82064248-82064267 None:intergenic 40.0%
ATCAAGAAGCTCAAAGGAGA+TGG + chr4_1:82064740-82064759 Msa0577750:CDS 40.0%
! ATGTTACTTGTTGGCTGTTG+CGG - chr4_1:82064832-82064851 None:intergenic 40.0%
GTTAGCTAGGAGTAACTGAT+CGG + chr4_1:82064891-82064910 Msa0577750:intron 40.0%
!! CAATTGGTCTTCTAAACAGG+TGG + chr4_1:82065374-82065393 Msa0577750:intron 40.0%
TTACGTTTCTTCCGGAAAGA+TGG + chr4_1:82065425-82065444 Msa0577750:CDS 40.0%
AAAAGAGATGGAAGAGCTGT+AGG + chr4_1:82065464-82065483 Msa0577750:CDS 40.0%
ACTCTTAACATTAGTAGCCG+CGG - chr4_1:82065572-82065591 None:intergenic 40.0%
AATGTTAAGAGTCCCAGTCA+TGG + chr4_1:82065580-82065599 Msa0577750:intron 40.0%
ATGTTAAGAGTCCCAGTCAT+GGG + chr4_1:82065581-82065600 Msa0577750:intron 40.0%
TGAACAACATTCCCATGACT+GGG - chr4_1:82065595-82065614 None:intergenic 40.0%
ATGAACAACATTCCCATGAC+TGG - chr4_1:82065596-82065615 None:intergenic 40.0%
TCACACTAATCTGCATGACT+AGG + chr4_1:82066040-82066059 Msa0577750:intron 40.0%
ACTAATCTGCATGACTAGGT+TGG + chr4_1:82066044-82066063 Msa0577750:intron 40.0%
CAGCAGCAGAAATTTACTCA+CGG - chr4_1:82066152-82066171 None:intergenic 40.0%
AGTATGAAGGACGAGCAATT+AGG - chr4_1:82066175-82066194 None:intergenic 40.0%
TCATTACAGAGACACAAGTG+AGG + chr4_1:82066430-82066449 Msa0577750:CDS 40.0%
! CCTTTCCGAAGTTTTTCTGT+AGG - chr4_1:82066519-82066538 None:intergenic 40.0%
CCTACAGAAAAACTTCGGAA+AGG + chr4_1:82066516-82066535 Msa0577750:intron 40.0%
AAAGCGAACAGTGCAAAAGA+AGG - chr4_1:82066611-82066630 None:intergenic 40.0%
GTACTATATGAGCTAGGACT+CGG - chr4_1:82066910-82066929 None:intergenic 40.0%
! GAAGCTCTGATTAGGTTCAT+AGG - chr4_1:82066968-82066987 None:intergenic 40.0%
! AGAAACCTCAGCTGACTTTA+AGG + chr4_1:82067062-82067081 Msa0577750:CDS 40.0%
AGTAACCTTAAAGTCAGCTG+AGG - chr4_1:82067070-82067089 None:intergenic 40.0%
AACTTAACTGCACCTCCAAT+CGG - chr4_1:82067104-82067123 None:intergenic 40.0%
GGTGCAGTTAAGTTTGAATG+AGG + chr4_1:82067110-82067129 Msa0577750:CDS 40.0%
! CACATCATCCCTTGATGATT+CGG - chr4_1:82067198-82067217 None:intergenic 40.0%
TAAAATAGCCCCTGGTTATC+TGG - chr4_1:82067252-82067271 None:intergenic 40.0%
!! AACCAGGGGCTATTTTATGA+TGG + chr4_1:82067255-82067274 Msa0577750:CDS 40.0%
ATCCATCATAAAATAGCCCC+TGG - chr4_1:82067260-82067279 None:intergenic 40.0%
! GATGGATATAATGGAAGGCA+AGG + chr4_1:82067273-82067292 Msa0577750:CDS 40.0%
TTACAGAATACTATCCGTGC+GGG - chr4_1:82067438-82067457 None:intergenic 40.0%
! TTCTTATTTGCTGCCTTCTG+TGG + chr4_1:82067527-82067546 Msa0577750:intron 40.0%
CGATGAGTCATATGAAGACT+AGG + chr4_1:82067855-82067874 Msa0577750:intron 40.0%
ATGAAGACTAGGTTAGCACT+TGG + chr4_1:82067866-82067885 Msa0577750:intron 40.0%
AGTGTTACATGGTTATAGGG+TGG + chr4_1:82067967-82067986 Msa0577750:intron 40.0%
TGAAAAGCTCCTTTCAATCC+TGG - chr4_1:82068160-82068179 None:intergenic 40.0%
TTAGGACCTCTGATTAAACG+AGG + chr4_1:82068209-82068228 Msa0577750:intron 40.0%
GCAACAGGAGTTTACATGAT+TGG - chr4_1:82068294-82068313 None:intergenic 40.0%
GCAGTCCAATGATGTTGAAT+GGG - chr4_1:82068381-82068400 None:intergenic 40.0%
TGCAGTCCAATGATGTTGAA+TGG - chr4_1:82068382-82068401 None:intergenic 40.0%
AAGTGAAATTTAGCGCTGTC+CGG + chr4_1:82068571-82068590 Msa0577750:intron 40.0%
GAAGAGGAGAAAACAAGATC+CGG - chr4_1:82068593-82068612 None:intergenic 40.0%
CATTTCCATCAGGGAAATCA+TGG - chr4_1:82068718-82068737 None:intergenic 40.0%
! GAGCCTTTTCATTTCCATCA+GGG - chr4_1:82068727-82068746 None:intergenic 40.0%
! AGAGCCTTTTCATTTCCATC+AGG - chr4_1:82068728-82068747 None:intergenic 40.0%
GCAATACTTACATTTCCTGC+TGG - chr4_1:82068773-82068792 None:intergenic 40.0%
GGTTCCCTTAATGAAGAAGA+TGG - chr4_1:82068916-82068935 None:intergenic 40.0%
! TTGTCCAGCAATAGTTTTCC+GGG - chr4_1:82068948-82068967 None:intergenic 40.0%
CATCATGAGATGCTCCAATT+TGG - chr4_1:82069201-82069220 None:intergenic 40.0%
ACAAACCTTTGTAGTCTCAG+AGG - chr4_1:82069296-82069315 None:intergenic 40.0%
ACACTATGATTTCTGACTGG+TGG + chr4_1:82069346-82069365 Msa0577750:intron 40.0%
TTTGTGCCTATGAGTTACCT+AGG + chr4_1:82069411-82069430 Msa0577750:intron 40.0%
GATATGTTGCTCATGCTTTG+TGG + chr4_1:82069741-82069760 Msa0577750:intron 40.0%
!! CGAGCTTTAGGAATCAAATC+AGG - chr4_1:82069852-82069871 None:intergenic 40.0%
TTCAACATCACCAAGCATAC+AGG - chr4_1:82069939-82069958 None:intergenic 40.0%
AGTTCCTGTTGAGCTAATTC+AGG + chr4_1:82069958-82069977 Msa0577750:CDS 40.0%
GTTACTCTGTGCATTACTTC+TGG + chr4_1:82070025-82070044 Msa0577750:CDS 40.0%
! TGTGCATTACTTCTGGAAAC+CGG + chr4_1:82070032-82070051 Msa0577750:CDS 40.0%
! AGAAGGCTGATGATGATTCA+TGG + chr4_1:82070245-82070264 Msa0577750:CDS 40.0%
GCTTCTTGAAGAGCTACTAA+AGG + chr4_1:82070327-82070346 Msa0577750:CDS 40.0%
GCTACTAAAGGATAAGCTAC+AGG + chr4_1:82070339-82070358 Msa0577750:CDS 40.0%
TTCTTTGTCCAAGAAAGAGC+AGG + chr4_1:82070408-82070427 Msa0577750:CDS 40.0%
TCTTTGTCCAAGAAAGAGCA+GGG + chr4_1:82070409-82070428 Msa0577750:CDS 40.0%
AATAATCCCCTGCTCTTTCT+TGG - chr4_1:82070419-82070438 None:intergenic 40.0%
GGATTATTCACATGGTTGCT+GGG + chr4_1:82070431-82070450 Msa0577750:CDS 40.0%
TTGAACCCTATTCTCAGTTG+CGG + chr4_1:82070472-82070491 Msa0577750:CDS 40.0%
CTTGATACGATCATCAGTCT+TGG - chr4_1:82070699-82070718 None:intergenic 40.0%
!!! GCAACCATTTTTTCCCTGTA+TGG - chr4_1:82070823-82070842 None:intergenic 40.0%
GTTGCATCACTTATAGCTTC+TGG + chr4_1:82070838-82070857 Msa0577750:CDS 40.0%
! AGCTAAGGTATCTTTGAGTG+AGG - chr4_1:82071109-82071128 None:intergenic 40.0%
! TGTATTTCTGACAGCAGCTA+AGG - chr4_1:82071124-82071143 None:intergenic 40.0%
TGCTGTCAGAAATACAACTC+AGG + chr4_1:82071128-82071147 Msa0577750:CDS 40.0%
CTTGACATAGCATAAAGCTC+TGG - chr4_1:82071270-82071289 None:intergenic 40.0%
ATGTTCACGTGAGTTTCGAA+AGG - chr4_1:82071298-82071317 None:intergenic 40.0%
!!! CTACTTTTTGGCGCAATGAT+AGG - chr4_1:82071380-82071399 None:intergenic 40.0%
ATGTGAGAGGTTACCAAGTT+AGG + chr4_1:82071766-82071785 Msa0577750:CDS 40.0%
ATTATGGGCAGTTGGAATCT+TGG + chr4_1:82071803-82071822 Msa0577750:CDS 40.0%
! TTTTCGTTAACCTGCATCTC+TGG - chr4_1:82071882-82071901 None:intergenic 40.0%
CCGAAAACAGAAAGTAGATG+TGG + chr4_1:82071929-82071948 Msa0577750:CDS 40.0%
CTTTGACGACTAACTTACCT+TGG - chr4_1:82072048-82072067 None:intergenic 40.0%
! GTTTTGCATGATGCTTCCAT+AGG + chr4_1:82072180-82072199 Msa0577750:intron 40.0%
TGATCATGATGTGGAAGTGA+TGG + chr4_1:82072555-82072574 Msa0577750:three_prime_UTR 40.0%
GTGAACCACATCACTTGACT+TGG + chr4_1:82064348-82064367 Msa0577750:intron 45.0%
CTTTGAATTGGGGACCATCA+TGG + chr4_1:82064379-82064398 Msa0577750:intron 45.0%
! TGTTACTTGTTGGCTGTTGC+GGG - chr4_1:82064831-82064850 None:intergenic 45.0%
! TTCACATTTGCGCCCTGTTT+TGG + chr4_1:82065014-82065033 Msa0577750:intron 45.0%
AGTCTAAGCAAACCGTTGAG+AGG + chr4_1:82065250-82065269 Msa0577750:intron 45.0%
CCATGAAACAACAGCACAAG+TGG - chr4_1:82066383-82066402 None:intergenic 45.0%
!! CCACTTGTGCTGTTGTTTCA+TGG + chr4_1:82066380-82066399 Msa0577750:intron 45.0%
!! TTGTGCTGTTGTTTCATGGC+AGG + chr4_1:82066384-82066403 Msa0577750:intron 45.0%
!! TGTGCTGTTGTTTCATGGCA+GGG + chr4_1:82066385-82066404 Msa0577750:intron 45.0%
GCTTCATGCTCGTTGTAGAA+GGG - chr4_1:82067156-82067175 None:intergenic 45.0%
AGCTTCATGCTCGTTGTAGA+AGG - chr4_1:82067157-82067176 None:intergenic 45.0%
TACAACGAGCATGAAGCTAC+CGG + chr4_1:82067159-82067178 Msa0577750:CDS 45.0%
! ATTCGGTGGTTTGGAATCAC+CGG - chr4_1:82067181-82067200 None:intergenic 45.0%
TCCAAACCACCGAATCATCA+AGG + chr4_1:82067186-82067205 Msa0577750:CDS 45.0%
CCAAACCACCGAATCATCAA+GGG + chr4_1:82067187-82067206 Msa0577750:CDS 45.0%
! ATCATCCCTTGATGATTCGG+TGG - chr4_1:82067195-82067214 None:intergenic 45.0%
! TGTCACATCTTTTTCCCGCA+CGG + chr4_1:82067421-82067440 Msa0577750:intron 45.0%
GAAACCACTCTCTCACAACT+AGG + chr4_1:82067646-82067665 Msa0577750:intron 45.0%
GTAACCTAGTTGTGAGAGAG+TGG - chr4_1:82067653-82067672 None:intergenic 45.0%
CATGGTTATAGGGTGGTAAG+TGG + chr4_1:82067974-82067993 Msa0577750:intron 45.0%
GGTGACATCTGACCTGAATT+AGG + chr4_1:82067995-82068014 Msa0577750:intron 45.0%
CATTGCTTAAGCATGAGTCG+TGG - chr4_1:82068086-82068105 None:intergenic 45.0%
CACGACTCATGCTTAAGCAA+TGG + chr4_1:82068084-82068103 Msa0577750:intron 45.0%
GTGACATTGCCAGGATTGAA+AGG + chr4_1:82068148-82068167 Msa0577750:intron 45.0%
AGAGGTCCTAAGCAGAGTTA+CGG - chr4_1:82068200-82068219 None:intergenic 45.0%
TGGCAACTAGTGTGGTGAAA+TGG - chr4_1:82068440-82068459 None:intergenic 45.0%
TTCACCACACTAGTTGCCAA+AGG + chr4_1:82068441-82068460 Msa0577750:intron 45.0%
CAAACCTTTGGCAACTAGTG+TGG - chr4_1:82068448-82068467 None:intergenic 45.0%
CTAGACCATGATTTCCCTGA+TGG + chr4_1:82068710-82068729 Msa0577750:CDS 45.0%
! TAGTTTTCCGGGTTCGTAAC+TGG - chr4_1:82068937-82068956 None:intergenic 45.0%
TGAGGTAGTGAGAAAACAGC+TGG - chr4_1:82069085-82069104 None:intergenic 45.0%
!! GCTGTTTTCTCACTACCTCA+AGG + chr4_1:82069085-82069104 Msa0577750:intron 45.0%
GTGACTTCATCAACACCTTG+AGG - chr4_1:82069103-82069122 None:intergenic 45.0%
! GAGATGCTCCAATTTGGCTT+TGG - chr4_1:82069195-82069214 None:intergenic 45.0%
! ATTGGAGCATCTCATGATGC+TGG + chr4_1:82069202-82069221 Msa0577750:CDS 45.0%
AGAGGAATAACCCCATTCTG+GGG - chr4_1:82069278-82069297 None:intergenic 45.0%
CAGAGGAATAACCCCATTCT+GGG - chr4_1:82069279-82069298 None:intergenic 45.0%
TCAGAGGAATAACCCCATTC+TGG - chr4_1:82069280-82069299 None:intergenic 45.0%
TGCAAGCAATCAGCCTAGAA+AGG - chr4_1:82069320-82069339 None:intergenic 45.0%
CAGGAACCTAGGTAACTCAT+AGG - chr4_1:82069420-82069439 None:intergenic 45.0%
TTGCTCATGCTTTGTGGCTT+TGG + chr4_1:82069747-82069766 Msa0577750:intron 45.0%
TGCATAGCACATCGAGCTTT+AGG - chr4_1:82069864-82069883 None:intergenic 45.0%
CCATCCTGAATTAGCTCAAC+AGG - chr4_1:82069965-82069984 None:intergenic 45.0%
CCTGTTGAGCTAATTCAGGA+TGG + chr4_1:82069962-82069981 Msa0577750:CDS 45.0%
GAAGTTCCATCTCACATTCC+TGG + chr4_1:82069998-82070017 Msa0577750:CDS 45.0%
TCCATCTCACATTCCTGGAA+AGG + chr4_1:82070003-82070022 Msa0577750:CDS 45.0%
ACCTTTCCAGGAATGTGAGA+TGG - chr4_1:82070007-82070026 None:intergenic 45.0%
ATGCACAGAGTAACCTTTCC+AGG - chr4_1:82070019-82070038 None:intergenic 45.0%
! GTGCATTACTTCTGGAAACC+GGG + chr4_1:82070033-82070052 Msa0577750:CDS 45.0%
CTTCTCTTTCCAATGGAGCA+GGG - chr4_1:82070117-82070136 None:intergenic 45.0%
! TAACAGCTCATCTGGAGTTC+TGG - chr4_1:82070143-82070162 None:intergenic 45.0%
TAAAGGATAAGCTACAGGCG+TGG + chr4_1:82070344-82070363 Msa0577750:CDS 45.0%
TTCATCTACTTCCCGAGATC+TGG - chr4_1:82070377-82070396 None:intergenic 45.0%
TCGGGAAGTAGATGAAGAGA+CGG + chr4_1:82070381-82070400 Msa0577750:CDS 45.0%
CTTTGTCCAAGAAAGAGCAG+GGG + chr4_1:82070410-82070429 Msa0577750:CDS 45.0%
AGAGCAGGGGATTATTCACA+TGG + chr4_1:82070423-82070442 Msa0577750:CDS 45.0%
GGGATTATTCACATGGTTGC+TGG + chr4_1:82070430-82070449 Msa0577750:CDS 45.0%
TATTCACATGGTTGCTGGGT+TGG + chr4_1:82070435-82070454 Msa0577750:CDS 45.0%
ATTCACATGGTTGCTGGGTT+GGG + chr4_1:82070436-82070455 Msa0577750:CDS 45.0%
GCAACTGAGAATAGGGTTCA+AGG - chr4_1:82070473-82070492 None:intergenic 45.0%
TCACACCGCAACTGAGAATA+GGG - chr4_1:82070480-82070499 None:intergenic 45.0%
TTCACACCGCAACTGAGAAT+AGG - chr4_1:82070481-82070500 None:intergenic 45.0%
ATTTCCGTGATGTCAATGGG+TGG + chr4_1:82070506-82070525 Msa0577750:CDS 45.0%
AAAACGTGCAGCCCAATGAA+GGG - chr4_1:82070536-82070555 None:intergenic 45.0%
CCAATTGGATCTTGTGCACT+TGG - chr4_1:82070889-82070908 None:intergenic 45.0%
CCAAGTGCACAAGATCCAAT+TGG + chr4_1:82070886-82070905 Msa0577750:CDS 45.0%
! GATGCCGCAGTTTTACCAAT+TGG - chr4_1:82070904-82070923 None:intergenic 45.0%
CCAGTGTAAGAGATGACAGA+TGG - chr4_1:82070990-82071009 None:intergenic 45.0%
CCATCTGTCATCTCTTACAC+TGG + chr4_1:82070987-82071006 Msa0577750:CDS 45.0%
TTTGTGTAGGCTCATGTGAG+AGG + chr4_1:82071753-82071772 Msa0577750:intron 45.0%
TGGACAAGGTTGTGCTAAGA+TGG + chr4_1:82071823-82071842 Msa0577750:CDS 45.0%
ACAAGGTTGTGCTAAGATGG+CGG + chr4_1:82071826-82071845 Msa0577750:CDS 45.0%
! GGAGAAAAGGAGTCGGTTTA+CGG + chr4_1:82071847-82071866 Msa0577750:CDS 45.0%
! GAGAAAAGGAGTCGGTTTAC+GGG + chr4_1:82071848-82071867 Msa0577750:CDS 45.0%
! AGAAAAGGAGTCGGTTTACG+GGG + chr4_1:82071849-82071868 Msa0577750:CDS 45.0%
AGCATCAGGAGATTTGACCA+TGG - chr4_1:82071985-82072004 None:intergenic 45.0%
TGATATTGCTCACGAGCATC+AGG - chr4_1:82071999-82072018 None:intergenic 45.0%
!! TGAGAAGTATCGTCAAGCCA+AGG + chr4_1:82072028-82072047 Msa0577750:CDS 45.0%
TTCCGGCATCAACATTCTGT+TGG + chr4_1:82072456-82072475 Msa0577750:three_prime_UTR 45.0%
GACCAACAGAATGTTGATGC+CGG - chr4_1:82072461-82072480 None:intergenic 45.0%
!! AAATAAAAAAAATCAATATA+TGG - chr4_1:82066001-82066020 None:intergenic 5.0%
!!! TTAGTTTATTTATTTATTTT+TGG + chr4_1:82070588-82070607 Msa0577750:intron 5.0%
!!! TAGTTTATTTATTTATTTTT+GGG + chr4_1:82070589-82070608 Msa0577750:intron 5.0%
! TTACTTGTTGGCTGTTGCGG+GGG - chr4_1:82064829-82064848 None:intergenic 50.0%
! GTTACTTGTTGGCTGTTGCG+GGG - chr4_1:82064830-82064849 None:intergenic 50.0%
! TCCATCTCTTTTCTTCCGCC+AGG - chr4_1:82065456-82065475 None:intergenic 50.0%
AGCAGAACCCTACTTTCCAG+AGG + chr4_1:82066105-82066124 Msa0577750:CDS 50.0%
AGAACCCTACTTTCCAGAGG+CGG + chr4_1:82066108-82066127 Msa0577750:CDS 50.0%
GTACTCACGTGTTGTAGGGA+AGG + chr4_1:82066833-82066852 Msa0577750:intron 50.0%
TTGTAGGGAAGGCTCAGTTC+TGG + chr4_1:82066844-82066863 Msa0577750:intron 50.0%
ACCTGGCACACAATTGTCAC+CGG + chr4_1:82066867-82066886 Msa0577750:CDS 50.0%
GGACTATACGCAGAAGAACC+CGG - chr4_1:82066889-82066908 None:intergenic 50.0%
TAAACAACGGACGTTGACCC+TGG - chr4_1:82066940-82066959 None:intergenic 50.0%
! GGACTGGAGAAGCTCTGATT+AGG - chr4_1:82066976-82066995 None:intergenic 50.0%
AATCAGAGCTTCTCCAGTCC+TGG + chr4_1:82066976-82066995 Msa0577750:CDS 50.0%
AACTTCTGCAGATCCAGGAC+TGG - chr4_1:82066992-82067011 None:intergenic 50.0%
GAGGTAACTTCTGCAGATCC+AGG - chr4_1:82066997-82067016 None:intergenic 50.0%
! TACTCAAGCTTTGCGCCGAT+TGG + chr4_1:82067086-82067105 Msa0577750:CDS 50.0%
!! CCCTTGATGATTCGGTGGTT+TGG - chr4_1:82067190-82067209 None:intergenic 50.0%
AGGGATGATGTGCAAGCAAG+AGG + chr4_1:82067206-82067225 Msa0577750:CDS 50.0%
TCTCTCTGGACCAGATAACC+AGG + chr4_1:82067239-82067258 Msa0577750:CDS 50.0%
CTCTCTGGACCAGATAACCA+GGG + chr4_1:82067240-82067259 Msa0577750:CDS 50.0%
TCTCTGGACCAGATAACCAG+GGG + chr4_1:82067241-82067260 Msa0577750:CDS 50.0%
AGGTCCTAAGCAGAGTTACG+GGG - chr4_1:82068198-82068217 None:intergenic 50.0%
GAGGTCCTAAGCAGAGTTAC+GGG - chr4_1:82068199-82068218 None:intergenic 50.0%
AAGCTTGTCACTGTCGCAAC+AGG - chr4_1:82068309-82068328 None:intergenic 50.0%
GCGACAGTGACAAGCTTGAA+AGG + chr4_1:82068312-82068331 Msa0577750:intron 50.0%
AAGGGAACCAGTTACGAACC+CGG + chr4_1:82068927-82068946 Msa0577750:CDS 50.0%
CGAACCCGGAAAACTATTGC+TGG + chr4_1:82068941-82068960 Msa0577750:CDS 50.0%
TTAAGGCAGTCTCCCCAGAA+TGG + chr4_1:82069263-82069282 Msa0577750:CDS 50.0%
TAAGGCAGTCTCCCCAGAAT+GGG + chr4_1:82069264-82069283 Msa0577750:CDS 50.0%
AAGCTCGATGTGCTATGCAC+AGG + chr4_1:82069865-82069884 Msa0577750:intron 50.0%
TCATCCCTCTGATTCTGCCT+GGG + chr4_1:82069913-82069932 Msa0577750:CDS 50.0%
TGACTTCACTGCATGACTCC+CGG - chr4_1:82070054-82070073 None:intergenic 50.0%
AGCAGGGTCGGTGAAATTCT+TGG - chr4_1:82070101-82070120 None:intergenic 50.0%
TCTTTCCAATGGAGCAGGGT+CGG - chr4_1:82070113-82070132 None:intergenic 50.0%
GCTTCTCTTTCCAATGGAGC+AGG - chr4_1:82070118-82070137 None:intergenic 50.0%
CTGGTGGCTTCTCTTTCCAA+TGG - chr4_1:82070124-82070143 None:intergenic 50.0%
CGTGGCTTACTTCCAGATCT+CGG + chr4_1:82070362-82070381 Msa0577750:CDS 50.0%
GTGGCTTACTTCCAGATCTC+GGG + chr4_1:82070363-82070382 Msa0577750:CDS 50.0%
CGGGAAGTAGATGAAGAGAC+GGG + chr4_1:82070382-82070401 Msa0577750:CDS 50.0%
!!! TTGCTGGGTTGGGTTTTGAG+TGG + chr4_1:82070446-82070465 Msa0577750:CDS 50.0%
!!! TGCTGGGTTGGGTTTTGAGT+GGG + chr4_1:82070447-82070466 Msa0577750:CDS 50.0%
CAGTCCACCCATTGACATCA+CGG - chr4_1:82070513-82070532 None:intergenic 50.0%
CAAAACGTGCAGCCCAATGA+AGG - chr4_1:82070537-82070556 None:intergenic 50.0%
! CTTCATTGGGCTGCACGTTT+TGG + chr4_1:82070535-82070554 Msa0577750:CDS 50.0%
!! ATTGGGCTGCACGTTTTGGA+AGG + chr4_1:82070539-82070558 Msa0577750:CDS 50.0%
TCATCAGTCTTGGCAGATGG+TGG - chr4_1:82070689-82070708 None:intergenic 50.0%
CGATCATCAGTCTTGGCAGA+TGG - chr4_1:82070692-82070711 None:intergenic 50.0%
ATAGCTTCTGGTGCATCTGC+TGG + chr4_1:82070850-82070869 Msa0577750:CDS 50.0%
! ACTGGCAGGGTATCTTTCTG+AGG + chr4_1:82070951-82070970 Msa0577750:CDS 50.0%
ATACAACTCAGGCAGCTGCA+CGG + chr4_1:82071139-82071158 Msa0577750:CDS 50.0%
GGCAGTTGGAATCTTGGACA+AGG + chr4_1:82071809-82071828 Msa0577750:CDS 50.0%
!! GTGCTAAGATGGCGGAGAAA+AGG + chr4_1:82071834-82071853 Msa0577750:CDS 50.0%
!! AGATGGCGGAGAAAAGGAGT+CGG + chr4_1:82071840-82071859 Msa0577750:CDS 50.0%
GGGTTTCAAACCAGAGATGC+AGG + chr4_1:82071869-82071888 Msa0577750:CDS 50.0%
!! TGTCTCAAGAGTGCTGTCCA+TGG + chr4_1:82071965-82071984 Msa0577750:CDS 50.0%
GGGCGCAAATGTGAAGTCTC+TGG - chr4_1:82065009-82065028 None:intergenic 55.0%
TCCGGAAAGATGGTCATGCC+TGG + chr4_1:82065435-82065454 Msa0577750:CDS 55.0%
GCCAGGCATGACCATCTTTC+CGG - chr4_1:82065439-82065458 None:intergenic 55.0%
GGAAAGATGGTCATGCCTGG+CGG + chr4_1:82065438-82065457 Msa0577750:CDS 55.0%
GCCTGGCGGAAGAAAAGAGA+TGG + chr4_1:82065452-82065471 Msa0577750:CDS 55.0%
CTGTAGGAGAAGCCCACGAA+CGG + chr4_1:82065480-82065499 Msa0577750:CDS 55.0%
ATGCACCTTCAGCCGTTCGT+GGG - chr4_1:82065495-82065514 None:intergenic 55.0%
AATGCACCTTCAGCCGTTCG+TGG - chr4_1:82065496-82065515 None:intergenic 55.0%
! AGCTCCGCCTCTGGAAAGTA+GGG - chr4_1:82066115-82066134 None:intergenic 55.0%
! TAGCTCCGCCTCTGGAAAGT+AGG - chr4_1:82066116-82066135 None:intergenic 55.0%
CTTTCCAGAGGCGGAGCTAT+TGG + chr4_1:82066117-82066136 Msa0577750:CDS 55.0%
ACATCCAATAGCTCCGCCTC+TGG - chr4_1:82066124-82066143 None:intergenic 55.0%
CCTGGCACACAATTGTCACC+GGG + chr4_1:82066868-82066887 Msa0577750:CDS 55.0%
!! TCAAGCTTTGCGCCGATTGG+AGG + chr4_1:82067089-82067108 Msa0577750:CDS 55.0%
GAGGAATCCACAGCTCTCTC+TGG + chr4_1:82067225-82067244 Msa0577750:CDS 55.0%
ATCTGGTCCAGAGAGAGCTG+TGG - chr4_1:82067235-82067254 None:intergenic 55.0%
GCTCTAGCTGTGACATTGCC+AGG + chr4_1:82068139-82068158 Msa0577750:intron 55.0%
GCTGACACATAGCCTGCTCT+AGG + chr4_1:82068412-82068431 Msa0577750:intron 55.0%
GGTGAAATGGTGCCTAGAGC+AGG - chr4_1:82068427-82068446 None:intergenic 55.0%
TGAGGTGCATCAGAGGTGGA+AGG - chr4_1:82069055-82069074 None:intergenic 55.0%
CATGTGAGGTGCATCAGAGG+TGG - chr4_1:82069059-82069078 None:intergenic 55.0%
AAGGCAGTCTCCCCAGAATG+GGG + chr4_1:82069265-82069284 Msa0577750:CDS 55.0%
GTCATCCCTCTGATTCTGCC+TGG + chr4_1:82069912-82069931 Msa0577750:CDS 55.0%
ATCACCAAGCATACAGGCCC+AGG - chr4_1:82069933-82069952 None:intergenic 55.0%
TTTCACCGACCCTGCTCCAT+TGG + chr4_1:82070105-82070124 Msa0577750:CDS 55.0%
! CAGCTCATCTGGAGTTCTGG+TGG - chr4_1:82070140-82070159 None:intergenic 55.0%
!! ATGGGTGGACTGCCCTTCAT+TGG + chr4_1:82070521-82070540 Msa0577750:CDS 55.0%
!! TGGGTGGACTGCCCTTCATT+GGG + chr4_1:82070522-82070541 Msa0577750:CDS 55.0%
GCATCCATTGCAGCTAGCAG+CGG + chr4_1:82070919-82070938 Msa0577750:CDS 55.0%
CATCCATTGCAGCTAGCAGC+GGG + chr4_1:82070920-82070939 Msa0577750:CDS 55.0%
AGAAGCCCACGAACGGCTGA+AGG + chr4_1:82065487-82065506 Msa0577750:CDS 60.0%
!! GGAAGGCTCAGTTCTGGACC+TGG + chr4_1:82066850-82066869 Msa0577750:CDS 60.0%
CCCGGTGACAATTGTGTGCC+AGG - chr4_1:82066871-82066890 None:intergenic 60.0%
CCTAAGCAGAGTTACGGGGC+TGG - chr4_1:82068194-82068213 None:intergenic 60.0%
CCAGCCCCGTAACTCTGCTT+AGG + chr4_1:82068191-82068210 Msa0577750:intron 60.0%
CAGGCCCAGGCAGAATCAGA+GGG - chr4_1:82069920-82069939 None:intergenic 60.0%
ACAGGCCCAGGCAGAATCAG+AGG - chr4_1:82069921-82069940 None:intergenic 60.0%
TCTGCCTGGGCCTGTATGCT+TGG + chr4_1:82069926-82069945 Msa0577750:CDS 60.0%
ATGCCCGCTGCTAGCTGCAA+TGG - chr4_1:82070926-82070945 None:intergenic 60.0%
TGCAGCTAGCAGCGGGCATA+AGG + chr4_1:82070927-82070946 Msa0577750:CDS 60.0%
GCAGCTAGCAGCGGGCATAA+GGG + chr4_1:82070928-82070947 Msa0577750:CDS 60.0%
TAGCAGCGGGCATAAGGGAC+TGG + chr4_1:82070933-82070952 Msa0577750:CDS 60.0%
AAGGCTAGCGTTGCTCCCCA+GGG - chr4_1:82072407-82072426 None:intergenic 60.0%
TAAGGCTAGCGTTGCTCCCC+AGG - chr4_1:82072408-82072427 None:intergenic 60.0%
! AGCGGGCATAAGGGACTGGC+AGG + chr4_1:82070937-82070956 Msa0577750:CDS 65.0%
! GCGGGCATAAGGGACTGGCA+GGG + chr4_1:82070938-82070957 Msa0577750:CDS 65.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 82064079 82072642 82064079 ID=Msa0577750;Name=Msa0577750
chr4_1 mRNA 82064079 82072642 82064079 ID=Msa0577750-mRNA-1;Parent=Msa0577750;Name=Msa0577750-mRNA-1;_AED=0.02;_eAED=0.02;_QI=168|1|1|1|1|1|13|242|960
chr4_1 exon 82064079 82064256 82064079 ID=Msa0577750-mRNA-1:exon:29616;Parent=Msa0577750-mRNA-1
chr4_1 exon 82064713 82064844 82064713 ID=Msa0577750-mRNA-1:exon:29617;Parent=Msa0577750-mRNA-1
chr4_1 exon 82065393 82065508 82065393 ID=Msa0577750-mRNA-1:exon:29618;Parent=Msa0577750-mRNA-1
chr4_1 exon 82066062 82066150 82066062 ID=Msa0577750-mRNA-1:exon:29619;Parent=Msa0577750-mRNA-1
chr4_1 exon 82066406 82066451 82066406 ID=Msa0577750-mRNA-1:exon:29620;Parent=Msa0577750-mRNA-1
chr4_1 exon 82066850 82067294 82066850 ID=Msa0577750-mRNA-1:exon:29621;Parent=Msa0577750-mRNA-1
chr4_1 exon 82068681 82068781 82068681 ID=Msa0577750-mRNA-1:exon:29622;Parent=Msa0577750-mRNA-1
chr4_1 exon 82068904 82068994 82068904 ID=Msa0577750-mRNA-1:exon:29623;Parent=Msa0577750-mRNA-1
chr4_1 exon 82069086 82069309 82069086 ID=Msa0577750-mRNA-1:exon:29624;Parent=Msa0577750-mRNA-1
chr4_1 exon 82069887 82070560 82069887 ID=Msa0577750-mRNA-1:exon:29625;Parent=Msa0577750-mRNA-1
chr4_1 exon 82070828 82071410 82070828 ID=Msa0577750-mRNA-1:exon:29626;Parent=Msa0577750-mRNA-1
chr4_1 exon 82071762 82072049 82071762 ID=Msa0577750-mRNA-1:exon:29627;Parent=Msa0577750-mRNA-1
chr4_1 exon 82072317 82072642 82072317 ID=Msa0577750-mRNA-1:exon:29628;Parent=Msa0577750-mRNA-1
chr4_1 five_prime_UTR 82064079 82064246 82064079 ID=Msa0577750-mRNA-1:five_prime_utr;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82064247 82064256 82064247 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82064713 82064844 82064713 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82065393 82065508 82065393 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82066062 82066150 82066062 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82066406 82066451 82066406 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82066850 82067294 82066850 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82068681 82068781 82068681 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82068904 82068994 82068904 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82069086 82069309 82069086 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82069887 82070560 82069887 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82070828 82071410 82070828 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82071762 82072049 82071762 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 CDS 82072317 82072400 82072317 ID=Msa0577750-mRNA-1:cds;Parent=Msa0577750-mRNA-1
chr4_1 three_prime_UTR 82072401 82072642 82072401 ID=Msa0577750-mRNA-1:three_prime_utr;Parent=Msa0577750-mRNA-1
Gene Sequence

>Msa0577750

ATGACATCTGGTTATGAATATGATATCGATGATCTGTATCAAGAAGCTCAAAGGAGATGGTTGAAGCCTGCAGAAGTGATGTACATTTTACAGAATCATGAAAAGTATCAGTTCACTCAAGAGCCCCCGCAACAGCCAACAAGTGGTTCGCTGTTTCTGTTTAACAGAAGAGTATTACGTTTCTTCCGGAAAGATGGTCATGCCTGGCGGAAGAAAAGAGATGGAAGAGCTGTAGGAGAAGCCCACGAACGGCTGAAGGTTGGAAATGTTGAAGCCATAAATTGTTACTATGCACATGGAGAGCAGAACCCTACTTTCCAGAGGCGGAGCTATTGGATGTTGAATCCGGAATTTGACCACATTGTTCTCGTTCATTACAGAGACACAAGTGAGGGAAGGCTCAGTTCTGGACCTGGCACACAATTGTCACCGGGTTCTTCTGCGTATAGTCCGAGTCCTAGCTCATATAGTACTCAGAATCCAGGGTCAACGTCCGTTGTTTATGACGCCTATGAACCTAATCAGAGCTTCTCCAGTCCTGGATCTGCAGAAGTTACCTCTTATAACAATGGAATGACTTACTCAGAAGGAGCAGAAGCAGAATCAGAAACCTCAGCTGACTTTAAGGTTACTCAAGCTTTGCGCCGATTGGAGGTGCAGTTAAGTTTGAATGAGGACAACATTGAAGAAATTGCTCCCTTCTACAACGAGCATGAAGCTACCGGTGATTCCAAACCACCGAATCATCAAGGGATGATGTGCAAGCAAGAGGAATCCACAGCTCTCTCTGGACCAGATAACCAGGGGCTATTTTATGATGGATATAATGGAAGGCAAGGTGATAGTGGTGAAAGTTATCATGAATTACTAGACCATGATTTCCCTGATGGAAATGAAAAGGCTCTATCATGGAAAAATGTATACATGCCAGCAGGAAATGAGAGTTCACCATCTTCTTCATTAAGGGAACCAGTTACGAACCCGGAAAACTATTGCTGGACAAATTTCAACACTGATAATGCTGGAAACTCTGTTTTCTCACTACCTCAAGGTGTTGATGAAGTCACACTTCCTCCATATTCTTCTATGGATGAAACACAAGAAATTCGTTCTAGCTACTATTCGACATTGTTTGACCAAAGCCAAATTGGAGCATCTCATGATGCTGGTTCAAGCTTAACTGTTTCACAAAAACAGAAATTTACTATTAAGGCAGTCTCCCCAGAATGGGGTTATTCCTCTGAGACTACAAAGGTTTTCATTATTGGGTCTTTTCTCTGTCATCCCTCTGATTCTGCCTGGGCCTGTATGCTTGGTGATGTTGAAGTTCCTGTTGAGCTAATTCAGGATGGTGTAATGTGTTGTGAAGTTCCATCTCACATTCCTGGAAAGGTTACTCTGTGCATTACTTCTGGAAACCGGGAGTCATGCAGTGAAGTCAGAGAGTTTGAGTATCGTGATAAGACCAAGAATTTCACCGACCCTGCTCCATTGGAAAGAGAAGCCACCAGAACTCCAGATGAGCTGTTATTACTTGTTAGATTTGGGCAGATGCTGCTTTCTGAGTCATCTGTAAGTAATGATAACAACGAATCGGGAATTTTCATAAAACAGAAGGCTGATGATGATTCATGGAGCCATATTATAGAGGCTCTACTATTTGGCAGTGAAAATTCTTCTGGTACTATCAATTGGCTTCTTGAAGAGCTACTAAAGGATAAGCTACAGGCGTGGCTTACTTCCAGATCTCGGGAAGTAGATGAAGAGACGGGCTGTTCTTTGTCCAAGAAAGAGCAGGGGATTATTCACATGGTTGCTGGGTTGGGTTTTGAGTGGGCCTTGAACCCTATTCTCAGTTGCGGTGTGAATATAAATTTCCGTGATGTCAATGGGTGGACTGCCCTTCATTGGGCTGCACGTTTTGGAAGGGAAAAAATGGTTGCATCACTTATAGCTTCTGGTGCATCTGCTGGAGCAGTGACAGATCCAAGTGCACAAGATCCAATTGGTAAAACTGCGGCATCCATTGCAGCTAGCAGCGGGCATAAGGGACTGGCAGGGTATCTTTCTGAGGTAGCTCTAACAAGCCATCTGTCATCTCTTACACTGGAAGAGAATGAGCTATCTAAAAGTTCTGCGGAGCTTCAAGCAGATTTAACTGTTAGTAATGTCTCCAAGGAAAATATTGCTTTCAGTGAGGATCGGACCTCACTCAAAGATACCTTAGCTGCTGTCAGAAATACAACTCAGGCAGCTGCACGGATACAAGCTGCTTTTCGATCACATTCATTTAGAAAACGGAGAACAAAAGAAACAAATGCTGTTATGAGTGGACATGATATAAGTGCAAGTAGTGTTGGTGACATGCCAGAGCTTTATGCTATGTCAAGACTTGCCTTTCGAAACTCACGTGAACATAACTCAGCTGCATTATCAATTCAGAAGAAATATCGAGGTTGGAAAGGTCGCAAAGATTTCCTATCATTGCGCCAAAAAGTAGTGAAGATACAGGCTCATGTGAGAGGTTACCAAGTTAGGAAGCATTACAAAGTATTATGGGCAGTTGGAATCTTGGACAAGGTTGTGCTAAGATGGCGGAGAAAAGGAGTCGGTTTACGGGGTTTCAAACCAGAGATGCAGGTTAACGAAAATGAAGATGAAGATATTCTCAAAGTGTTCCGAAAACAGAAAGTAGATGTGGAAATTGAAAAGGCTGTCTCAAGAGTGCTGTCCATGGTCAAATCTCCTGATGCTCGTGAGCAATATCATCGCATGCTTGAGAAGTATCGTCAAGCCAAGGCCGAACTTGCACAAACAAGTGAAGAAAAATCGGTAACAACTTCTGTAGAAGATTTTTTAAACATGGATGATGATTTTTATTAA
Protein sequence

>Msa0577750

MTSGYEYDIDDLYQEAQRRWLKPAEVMYILQNHEKYQFTQEPPQQPTSGSLFLFNRRVLRFFRKDGHAWRKKRDGRAVGEAHERLKVGNVEAINCYYAHGEQNPTFQRRSYWMLNPEFDHIVLVHYRDTSEGRLSSGPGTQLSPGSSAYSPSPSSYSTQNPGSTSVVYDAYEPNQSFSSPGSAEVTSYNNGMTYSEGAEAESETSADFKVTQALRRLEVQLSLNEDNIEEIAPFYNEHEATGDSKPPNHQGMMCKQEESTALSGPDNQGLFYDGYNGRQGDSGESYHELLDHDFPDGNEKALSWKNVYMPAGNESSPSSSLREPVTNPENYCWTNFNTDNAGNSVFSLPQGVDEVTLPPYSSMDETQEIRSSYYSTLFDQSQIGASHDAGSSLTVSQKQKFTIKAVSPEWGYSSETTKVFIIGSFLCHPSDSAWACMLGDVEVPVELIQDGVMCCEVPSHIPGKVTLCITSGNRESCSEVREFEYRDKTKNFTDPAPLEREATRTPDELLLLVRFGQMLLSESSVSNDNNESGIFIKQKADDDSWSHIIEALLFGSENSSGTINWLLEELLKDKLQAWLTSRSREVDEETGCSLSKKEQGIIHMVAGLGFEWALNPILSCGVNINFRDVNGWTALHWAARFGREKMVASLIASGASAGAVTDPSAQDPIGKTAASIAASSGHKGLAGYLSEVALTSHLSSLTLEENELSKSSAELQADLTVSNVSKENIAFSEDRTSLKDTLAAVRNTTQAAARIQAAFRSHSFRKRRTKETNAVMSGHDISASSVGDMPELYAMSRLAFRNSREHNSAALSIQKKYRGWKGRKDFLSLRQKVVKIQAHVRGYQVRKHYKVLWAVGILDKVVLRWRRKGVGLRGFKPEMQVNENEDEDILKVFRKQKVDVEIEKAVSRVLSMVKSPDAREQYHRMLEKYRQAKAELAQTSEEKSVTTSVEDFLNMDDDFY*